HEADER OXIDOREDUCTASE 21-JAN-11 2Y6F TITLE ISOPENICILLIN N SYNTHASE WITH AC-D-S-METHYL-3R-METHYLCYSTEINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENICILLIN N SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IPNS; COMPND 5 EC: 1.21.3.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS (STRAIN FGSC A4 / ATCC SOURCE 3 38163 / CBS 112.46 / NRRL 194 / M139); SOURCE 4 ORGANISM_COMMON: ASPERGILLUS NIDULANS; SOURCE 5 ORGANISM_TAXID: 227321; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: NM554; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PJB703 KEYWDS OXIDOREDUCTASE, OXYGENASE, PENICILLIN BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR P.J.RUTLEDGE,I.J.CLIFTON,W.GE REVDAT 4 08-MAY-24 2Y6F 1 SOURCE REVDAT 3 20-DEC-23 2Y6F 1 REMARK LINK REVDAT 2 05-JUL-17 2Y6F 1 REMARK REVDAT 1 31-AUG-11 2Y6F 0 JRNL AUTH I.J.CLIFTON,W.GE,R.M.ADLINGTON,J.E.BALDWIN,P.J.RUTLEDGE JRNL TITL ISOPENICILLIN N SYNTHASE BINDS JRNL TITL 2 DELTA-(L-ALPHA-AMINOADIPOYL) JRNL TITL 3 -L-CYSTEINYL-D-THIA-ALLO-ISOLEUCINE THROUGH BOTH SULFUR JRNL TITL 4 ATOMS. JRNL REF CHEMBIOCHEM V. 12 1881 2011 JRNL REFN ISSN 1439-4227 JRNL PMID 21678539 JRNL DOI 10.1002/CBIC.201100149 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 11.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 29614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1258 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2182 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2632 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 296 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.329 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2736 ; 0.033 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3724 ; 1.883 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 327 ; 6.501 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;33.622 ;24.681 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 423 ;12.907 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;12.082 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 389 ; 0.301 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2164 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1646 ; 1.240 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2656 ; 1.951 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1090 ; 3.179 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1068 ; 4.810 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 10 REMARK 3 ORIGIN FOR THE GROUP (A): -6.6690 42.6330 -8.5400 REMARK 3 T TENSOR REMARK 3 T11: 0.0390 T22: 0.5469 REMARK 3 T33: 0.1220 T12: 0.1244 REMARK 3 T13: -0.0389 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 15.5711 L22: 12.0213 REMARK 3 L33: 15.6659 L12: -12.1379 REMARK 3 L13: -12.7352 L23: 13.6800 REMARK 3 S TENSOR REMARK 3 S11: -0.0464 S12: 0.8640 S13: 0.2474 REMARK 3 S21: -0.0369 S22: -0.5662 S23: 0.3380 REMARK 3 S31: -0.1079 S32: -1.0665 S33: 0.6126 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2270 31.0130 -20.6280 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0580 REMARK 3 T33: 0.0465 T12: -0.0056 REMARK 3 T13: -0.0008 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.9509 L22: 1.9801 REMARK 3 L33: 2.2773 L12: 0.0578 REMARK 3 L13: -0.3646 L23: -0.5603 REMARK 3 S TENSOR REMARK 3 S11: -0.0824 S12: 0.1455 S13: -0.0722 REMARK 3 S21: -0.0966 S22: 0.0070 S23: -0.0399 REMARK 3 S31: 0.2070 S32: 0.0039 S33: 0.0754 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 55 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9840 29.7700 -7.4200 REMARK 3 T TENSOR REMARK 3 T11: 0.0593 T22: 0.0671 REMARK 3 T33: 0.0675 T12: 0.0022 REMARK 3 T13: -0.0005 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.3692 L22: 2.0037 REMARK 3 L33: 1.0872 L12: -0.1150 REMARK 3 L13: 0.0202 L23: -0.9207 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.0431 S13: 0.0500 REMARK 3 S21: -0.1274 S22: 0.0197 S23: 0.0313 REMARK 3 S31: -0.0021 S32: -0.0887 S33: -0.0180 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 56 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1120 22.0050 11.1160 REMARK 3 T TENSOR REMARK 3 T11: 0.0510 T22: 0.0743 REMARK 3 T33: 0.1053 T12: -0.0107 REMARK 3 T13: 0.0261 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 0.6683 L22: 3.1146 REMARK 3 L33: 8.6527 L12: 0.3010 REMARK 3 L13: 2.2290 L23: 2.7364 REMARK 3 S TENSOR REMARK 3 S11: 0.0323 S12: -0.1348 S13: -0.0934 REMARK 3 S21: 0.0369 S22: 0.0183 S23: 0.1673 REMARK 3 S31: 0.1535 S32: -0.3013 S33: -0.0506 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5420 28.1620 21.6030 REMARK 3 T TENSOR REMARK 3 T11: 0.1102 T22: 0.0650 REMARK 3 T33: 0.0408 T12: 0.0109 REMARK 3 T13: -0.0214 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.8251 L22: 2.2930 REMARK 3 L33: 0.1948 L12: 1.5463 REMARK 3 L13: 0.3586 L23: 0.0964 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: -0.0654 S13: -0.2074 REMARK 3 S21: 0.1625 S22: 0.0572 S23: -0.0411 REMARK 3 S31: 0.0193 S32: -0.0118 S33: -0.0495 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 76 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): 22.2350 37.0750 19.9920 REMARK 3 T TENSOR REMARK 3 T11: 0.0357 T22: 0.0801 REMARK 3 T33: 0.0571 T12: -0.0232 REMARK 3 T13: -0.0003 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 5.0518 L22: 3.0971 REMARK 3 L33: 4.4823 L12: -1.7524 REMARK 3 L13: 0.1459 L23: 0.3531 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: -0.0223 S13: 0.2453 REMARK 3 S21: 0.0233 S22: 0.1385 S23: -0.2546 REMARK 3 S31: -0.2512 S32: 0.4401 S33: -0.1386 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 117 REMARK 3 ORIGIN FOR THE GROUP (A): 18.4210 32.5500 10.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.0639 T22: 0.0512 REMARK 3 T33: 0.0651 T12: -0.0019 REMARK 3 T13: -0.0121 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.3864 L22: 0.5951 REMARK 3 L33: 0.8688 L12: -0.4369 REMARK 3 L13: -0.5587 L23: 0.2292 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.0879 S13: 0.0402 REMARK 3 S21: 0.0187 S22: 0.0100 S23: -0.0219 REMARK 3 S31: -0.0243 S32: 0.0484 S33: -0.0141 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 118 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 23.5190 27.1080 11.6340 REMARK 3 T TENSOR REMARK 3 T11: 0.0499 T22: 0.0720 REMARK 3 T33: 0.0572 T12: 0.0155 REMARK 3 T13: -0.0100 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.7451 L22: 1.8487 REMARK 3 L33: 0.5910 L12: 0.8443 REMARK 3 L13: -0.1422 L23: 0.1893 REMARK 3 S TENSOR REMARK 3 S11: 0.0822 S12: -0.1889 S13: -0.0062 REMARK 3 S21: 0.1629 S22: -0.0897 S23: -0.0376 REMARK 3 S31: 0.0067 S32: 0.0662 S33: 0.0075 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 165 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4220 26.6180 -5.2260 REMARK 3 T TENSOR REMARK 3 T11: 0.0383 T22: 0.0566 REMARK 3 T33: 0.0656 T12: -0.0027 REMARK 3 T13: 0.0018 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.1957 L22: 1.3364 REMARK 3 L33: 2.5218 L12: -0.1779 REMARK 3 L13: 0.2088 L23: -1.1867 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: 0.0089 S13: -0.0299 REMARK 3 S21: -0.0284 S22: -0.0037 S23: 0.0168 REMARK 3 S31: 0.0689 S32: 0.0439 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 166 A 176 REMARK 3 ORIGIN FOR THE GROUP (A): 22.8260 34.6170 -15.4200 REMARK 3 T TENSOR REMARK 3 T11: 0.0703 T22: 0.0895 REMARK 3 T33: 0.0678 T12: 0.0085 REMARK 3 T13: 0.0236 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 0.5979 L22: 0.6305 REMARK 3 L33: 3.4189 L12: -0.0263 REMARK 3 L13: 0.8799 L23: -0.9721 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: 0.1425 S13: -0.0661 REMARK 3 S21: 0.0088 S22: -0.0322 S23: -0.0576 REMARK 3 S31: -0.0802 S32: 0.3405 S33: 0.0345 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 177 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): 11.2140 32.0600 6.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.0491 T22: 0.0511 REMARK 3 T33: 0.0576 T12: -0.0051 REMARK 3 T13: -0.0138 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.8613 L22: 0.6413 REMARK 3 L33: 0.9401 L12: 0.0196 REMARK 3 L13: -0.4091 L23: 0.0929 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: -0.0360 S13: 0.0661 REMARK 3 S21: 0.0292 S22: 0.0100 S23: -0.0255 REMARK 3 S31: 0.0112 S32: -0.0221 S33: -0.0258 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 193 A 197 REMARK 3 ORIGIN FOR THE GROUP (A): -5.6880 40.3390 19.7820 REMARK 3 T TENSOR REMARK 3 T11: 0.6176 T22: 0.2590 REMARK 3 T33: 0.4372 T12: 0.0630 REMARK 3 T13: -0.0323 T23: -0.3922 REMARK 3 L TENSOR REMARK 3 L11: 11.2361 L22: 55.0236 REMARK 3 L33: 8.9794 L12: 21.1068 REMARK 3 L13: -6.6944 L23: -20.8580 REMARK 3 S TENSOR REMARK 3 S11: 0.5183 S12: 0.1137 S13: 0.3851 REMARK 3 S21: 3.0821 S22: -0.5680 S23: 1.6247 REMARK 3 S31: -1.0987 S32: -0.0785 S33: 0.0497 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 198 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4840 49.7190 10.5000 REMARK 3 T TENSOR REMARK 3 T11: 0.0676 T22: 0.0505 REMARK 3 T33: 0.1037 T12: 0.0156 REMARK 3 T13: 0.0216 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 0.1836 L22: 7.2380 REMARK 3 L33: 6.2049 L12: 0.7790 REMARK 3 L13: 0.7936 L23: -0.3791 REMARK 3 S TENSOR REMARK 3 S11: 0.0740 S12: 0.0234 S13: 0.0019 REMARK 3 S21: 0.2779 S22: 0.0582 S23: 0.0311 REMARK 3 S31: -0.0138 S32: -0.0082 S33: -0.1322 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 209 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3430 40.4150 -2.2060 REMARK 3 T TENSOR REMARK 3 T11: 0.0515 T22: 0.0450 REMARK 3 T33: 0.0614 T12: 0.0095 REMARK 3 T13: -0.0044 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.8190 L22: 0.5725 REMARK 3 L33: 0.6688 L12: -0.0157 REMARK 3 L13: -0.1173 L23: 0.0974 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.0343 S13: 0.0461 REMARK 3 S21: -0.0327 S22: -0.0355 S23: 0.0956 REMARK 3 S31: -0.0658 S32: -0.0882 S33: 0.0124 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 257 A 266 REMARK 3 ORIGIN FOR THE GROUP (A): 14.6930 48.0220 -13.5160 REMARK 3 T TENSOR REMARK 3 T11: 0.0840 T22: 0.0163 REMARK 3 T33: 0.0691 T12: 0.0100 REMARK 3 T13: 0.0112 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 4.0537 L22: 1.7175 REMARK 3 L33: 5.3761 L12: 1.4127 REMARK 3 L13: 0.8508 L23: 0.8760 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: 0.1623 S13: 0.3208 REMARK 3 S21: -0.1842 S22: 0.0014 S23: 0.0373 REMARK 3 S31: -0.2510 S32: -0.1477 S33: -0.0449 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 267 A 293 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6960 38.4120 1.7810 REMARK 3 T TENSOR REMARK 3 T11: 0.0532 T22: 0.0542 REMARK 3 T33: 0.0590 T12: -0.0056 REMARK 3 T13: -0.0100 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.6855 L22: 0.4719 REMARK 3 L33: 0.5375 L12: -0.1423 REMARK 3 L13: -0.1938 L23: -0.0502 REMARK 3 S TENSOR REMARK 3 S11: -0.0031 S12: 0.0012 S13: 0.0472 REMARK 3 S21: -0.0060 S22: -0.0170 S23: 0.0100 REMARK 3 S31: -0.0392 S32: 0.0012 S33: 0.0201 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 294 A 303 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0150 49.8490 -20.2000 REMARK 3 T TENSOR REMARK 3 T11: 0.1655 T22: 0.0333 REMARK 3 T33: 0.0896 T12: 0.0057 REMARK 3 T13: 0.0155 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 2.4163 L22: 0.3025 REMARK 3 L33: 12.2418 L12: -0.1563 REMARK 3 L13: 4.7569 L23: -1.3023 REMARK 3 S TENSOR REMARK 3 S11: -0.0710 S12: 0.1639 S13: -0.0857 REMARK 3 S21: 0.1351 S22: 0.0522 S23: -0.0038 REMARK 3 S31: -0.5974 S32: 0.1978 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 304 A 309 REMARK 3 ORIGIN FOR THE GROUP (A): 23.3050 54.2670 -15.3880 REMARK 3 T TENSOR REMARK 3 T11: 0.1742 T22: 0.1093 REMARK 3 T33: 0.1039 T12: -0.0808 REMARK 3 T13: 0.0315 T23: 0.0642 REMARK 3 L TENSOR REMARK 3 L11: 1.0838 L22: 4.4815 REMARK 3 L33: 4.1973 L12: 1.5918 REMARK 3 L13: 1.1495 L23: 4.2722 REMARK 3 S TENSOR REMARK 3 S11: -0.1702 S12: 0.0356 S13: -0.0461 REMARK 3 S21: -0.4623 S22: 0.2750 S23: -0.1511 REMARK 3 S31: -0.4905 S32: 0.3127 S33: -0.1047 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 310 A 321 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8600 45.3100 -1.0220 REMARK 3 T TENSOR REMARK 3 T11: 0.0476 T22: 0.0348 REMARK 3 T33: 0.0950 T12: -0.0224 REMARK 3 T13: 0.0003 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 3.7816 L22: 1.8168 REMARK 3 L33: 4.1614 L12: 0.7152 REMARK 3 L13: -2.8355 L23: -1.1962 REMARK 3 S TENSOR REMARK 3 S11: 0.1375 S12: -0.1563 S13: 0.2631 REMARK 3 S21: 0.1150 S22: -0.0961 S23: -0.1795 REMARK 3 S31: -0.2129 S32: 0.3032 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 322 A 331 REMARK 3 ORIGIN FOR THE GROUP (A): 13.4780 47.3830 9.6300 REMARK 3 T TENSOR REMARK 3 T11: 0.0585 T22: 0.0320 REMARK 3 T33: 0.0889 T12: -0.0214 REMARK 3 T13: -0.0317 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 2.4978 L22: 0.7500 REMARK 3 L33: 2.6937 L12: -1.0278 REMARK 3 L13: -2.0366 L23: 0.9279 REMARK 3 S TENSOR REMARK 3 S11: 0.0481 S12: -0.0212 S13: 0.0988 REMARK 3 S21: -0.0274 S22: 0.0409 S23: -0.0666 REMARK 3 S31: -0.0988 S32: 0.1023 S33: -0.0890 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. DATA COLLECTION STATISTICS REPORT FEWER UNIQUE REMARK 3 REFLECTIONS BUT DATASET HAS 30904 IN TOTAL. REMARK 4 REMARK 4 2Y6F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1290047067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX7.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.488 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22362 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1BK0 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M LITHIUM SULPHATE, 76MM TRIS/HCL, REMARK 280 PH 8.5, 2.0 MM FERROUS SULPHATE, 2.6MG/ML TRIPEPTIDE, 25MG/ML REMARK 280 PROTEIN. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.69800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.23800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.67450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.23800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.69800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.67450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 4 CG1 CG2 REMARK 470 ALA A 237 CB REMARK 470 LYS A 305 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2071 O HOH A 2078 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 218 CB SER A 218 OG 0.079 REMARK 500 PHE A 285 CE1 PHE A 285 CZ 0.131 REMARK 500 TYR A 316 CD1 TYR A 316 CE1 0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 -116.85 -98.61 REMARK 500 HIS A 82 59.88 -107.55 REMARK 500 LYS A 97 -41.98 -132.33 REMARK 500 THR A 123 -11.40 77.56 REMARK 500 ASP A 179 -0.28 -145.45 REMARK 500 SER A 226 170.29 -58.12 REMARK 500 ASN A 230 -25.37 -154.53 REMARK 500 LEU A 288 -158.15 -89.40 REMARK 500 PRO A 299 1.33 -67.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A1333 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 214 NE2 REMARK 620 2 ASP A 216 OD1 97.4 REMARK 620 3 HIS A 270 NE2 85.1 85.3 REMARK 620 4 M9F A1332 SAF 89.1 84.7 167.7 REMARK 620 5 M9F A1332 SAM 90.4 169.5 102.4 88.4 REMARK 620 6 HOH A2214 O 173.5 86.1 89.7 96.7 86.8 REMARK 620 N 1 2 3 4 5 REMARK 630 REMARK 630 MOLECULE TYPE: NULL REMARK 630 MOLECULE NAME: (2S)-2-AMINO-6-[[(2R)-1-[[(2S)-1-HYDROXY-3- REMARK 630 METHYLSULFANYL-1-OXO-BUTAN-2-YL]AMINO]-1-OXO-3-SULFANYL-PROPAN-2- REMARK 630 YL]AMINO]-6-OXO-HEXANOIC ACID REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 M9F A 1332 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: UN1 CYS 1ME REMARK 630 DETAILS: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE M9F A 1332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 1333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1334 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1HB4 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (OXYGEN EXPOSED REMARK 900 PRODUCT FROM ANAEROBIC ACOV FE COMPLEX) REMARK 900 RELATED ID: 1BLZ RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ACV-FE-NO REMARK 900 COMPLEX) REMARK 900 RELATED ID: 2WO7 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE L,L,D-ACD2AB REMARK 900 (UNEXPOSED) REMARK 900 RELATED ID: 1OC1 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE AMINOADIPOYL-CYSTEINYL -AMINOBUTYRATE-FE REMARK 900 COMPLEX REMARK 900 RELATED ID: 1W3V RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE D-(L-A-AMINOADIPOYL )-(3R)-METHYL-L- REMARK 900 CYSTEINE D-A- HYDROXYISOVALERYL ESTER COMPLEX (ANAEROBIC) REMARK 900 RELATED ID: 1UZW RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH L-D-(A- AMINOADIPOYL)-L-CYSTEINYL-D- REMARK 900 ISODEHYDROVALINE REMARK 900 RELATED ID: 1IPS RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (MANGANESE REMARK 900 COMPLEX) REMARK 900 RELATED ID: 1BK0 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ACV-FE COMPLEX) REMARK 900 RELATED ID: 1W3X RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE D-(L-A-AMINOADIPOYL )-(3R)-METHYL-L- REMARK 900 CYSTEINE D-A- HYDROXYISOVALERYL ESTER COMPLEX (OXYGEN EXPOSED 5 REMARK 900 MINUTES 20 BAR) REMARK 900 RELATED ID: 2VBP RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE L,L,L-ACAB REMARK 900 (UNEXPOSED) REMARK 900 RELATED ID: 1HB3 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (OXYGEN EXPOSED REMARK 900 PRODUCT FROM ANAEROBIC ACOV FE COMPLEX) REMARK 900 RELATED ID: 1W04 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE AMINOADIPOYL-CYSTEINYL -GLYCINE-FE-NO REMARK 900 COMPLEX REMARK 900 RELATED ID: 1QIQ RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ACMC FE COMPLEX) REMARK 900 RELATED ID: 1QJF RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (MONOCYCLIC REMARK 900 SULFOXIDE - FE COMPLEX) REMARK 900 RELATED ID: 1OBN RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE AMINOADIPOYL-CYSTEINYL -AMINOBUTYRATE-FE- REMARK 900 NO COMPLEX REMARK 900 RELATED ID: 2BU9 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE COMPLEXED WITH L- AMINOADIPOYL-L-CYSTEINYL- REMARK 900 L-HEXAFLUOROVALINE REMARK 900 RELATED ID: 1ODM RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ANAEROBIC AC- REMARK 900 VINYLGLYCINE FE COMPLEX ) REMARK 900 RELATED ID: 2Y60 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH AC-D- METHIONINE REMARK 900 RELATED ID: 2VBD RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE L,L,L-ACOMP REMARK 900 (UNEXPOSED) REMARK 900 RELATED ID: 2VCM RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE ASMCOV REMARK 900 RELATED ID: 1ODN RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (OXYGEN-EXPOSED REMARK 900 PRODUCT FROM ANAEROBIC AC-VINYLGLYCINE FE COMPLEX) REMARK 900 RELATED ID: 1QJE RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (IPN - FE REMARK 900 COMPLEX) REMARK 900 RELATED ID: 1HB2 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (OXYGEN EXPOSED REMARK 900 PRODUCT FROM ANAEROBIC ACOV FE COMPLEX) REMARK 900 RELATED ID: 2VE1 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE ASMCOV (OXYGEN REMARK 900 EXPOSED 1MIN 20BAR) REMARK 900 RELATED ID: 2VAU RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE ACOMP (UNEXPOSED) REMARK 900 RELATED ID: 1W03 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE AMINOADIPOYL-CYSTEINYL -GLYCINE-FE COMPLEX REMARK 900 RELATED ID: 2VBB RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH SUBSTRATE ANALOGUE ACOMP (35MINUTES REMARK 900 OXYGEN EXPOSURE) REMARK 900 RELATED ID: 1W06 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE AMINOADIPOYL-CYSTEINYL -ALANINE-FE NO REMARK 900 COMPLEX REMARK 900 RELATED ID: 1HB1 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ANAEROBIC ACOV REMARK 900 FE COMPLEX) REMARK 900 RELATED ID: 2IVJ RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ANAEROBIC AC- REMARK 900 CYCLOPROPYLGLYCINE FE COMPLEX) REMARK 900 RELATED ID: 1W05 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE AMINOADIPOYL-CYSTEINYL -ALANINE-FE COMPLEX REMARK 900 RELATED ID: 2JB4 RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE WITH A 2- THIABICYCLOHEPTAN-6-ONE PRODUCT REMARK 900 ANALOGUE REMARK 900 RELATED ID: 2IVI RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ANAEROBIC AC- REMARK 900 METHYL-CYCLOPROPYLGLYCINE FE COMPLEX) REMARK 900 RELATED ID: 2BJS RELATED DB: PDB REMARK 900 ISOPENICILLIN N SYNTHASE C-TERMINAL TRUNCATION MUTANT DBREF 2Y6F A 1 331 UNP P05326 IPNS_EMENI 1 331 SEQRES 1 A 331 MET GLY SER VAL SER LYS ALA ASN VAL PRO LYS ILE ASP SEQRES 2 A 331 VAL SER PRO LEU PHE GLY ASP ASP GLN ALA ALA LYS MET SEQRES 3 A 331 ARG VAL ALA GLN GLN ILE ASP ALA ALA SER ARG ASP THR SEQRES 4 A 331 GLY PHE PHE TYR ALA VAL ASN HIS GLY ILE ASN VAL GLN SEQRES 5 A 331 ARG LEU SER GLN LYS THR LYS GLU PHE HIS MET SER ILE SEQRES 6 A 331 THR PRO GLU GLU LYS TRP ASP LEU ALA ILE ARG ALA TYR SEQRES 7 A 331 ASN LYS GLU HIS GLN ASP GLN VAL ARG ALA GLY TYR TYR SEQRES 8 A 331 LEU SER ILE PRO GLY LYS LYS ALA VAL GLU SER PHE CYS SEQRES 9 A 331 TYR LEU ASN PRO ASN PHE THR PRO ASP HIS PRO ARG ILE SEQRES 10 A 331 GLN ALA LYS THR PRO THR HIS GLU VAL ASN VAL TRP PRO SEQRES 11 A 331 ASP GLU THR LYS HIS PRO GLY PHE GLN ASP PHE ALA GLU SEQRES 12 A 331 GLN TYR TYR TRP ASP VAL PHE GLY LEU SER SER ALA LEU SEQRES 13 A 331 LEU LYS GLY TYR ALA LEU ALA LEU GLY LYS GLU GLU ASN SEQRES 14 A 331 PHE PHE ALA ARG HIS PHE LYS PRO ASP ASP THR LEU ALA SEQRES 15 A 331 SER VAL VAL LEU ILE ARG TYR PRO TYR LEU ASP PRO TYR SEQRES 16 A 331 PRO GLU ALA ALA ILE LYS THR ALA ALA ASP GLY THR LYS SEQRES 17 A 331 LEU SER PHE GLU TRP HIS GLU ASP VAL SER LEU ILE THR SEQRES 18 A 331 VAL LEU TYR GLN SER ASN VAL GLN ASN LEU GLN VAL GLU SEQRES 19 A 331 THR ALA ALA GLY TYR GLN ASP ILE GLU ALA ASP ASP THR SEQRES 20 A 331 GLY TYR LEU ILE ASN CYS GLY SER TYR MET ALA HIS LEU SEQRES 21 A 331 THR ASN ASN TYR TYR LYS ALA PRO ILE HIS ARG VAL LYS SEQRES 22 A 331 TRP VAL ASN ALA GLU ARG GLN SER LEU PRO PHE PHE VAL SEQRES 23 A 331 ASN LEU GLY TYR ASP SER VAL ILE ASP PRO PHE ASP PRO SEQRES 24 A 331 ARG GLU PRO ASN GLY LYS SER ASP ARG GLU PRO LEU SER SEQRES 25 A 331 TYR GLY ASP TYR LEU GLN ASN GLY LEU VAL SER LEU ILE SEQRES 26 A 331 ASN LYS ASN GLY GLN THR HET M9F A1332 25 HET FE A1333 1 HET SO4 A1334 5 HETNAM M9F (2S)-2-AMINO-6-[[(2R)-1-[[(2S)-1-HYDROXY-3- HETNAM 2 M9F METHYLSULFANYL-1-OXO-BUTAN-2-YL]AMINO]-1-OXO-3- HETNAM 3 M9F SULFANYL-PROPAN-2-YL]AMINO]-6-OXO-HEXANOIC ACID HETNAM FE FE (III) ION HETNAM SO4 SULFATE ION FORMUL 2 M9F C14 H25 N3 O6 S2 FORMUL 3 FE FE 3+ FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *296(H2 O) HELIX 1 1 SER A 15 GLY A 19 5 5 HELIX 2 2 ASP A 21 ASP A 38 1 18 HELIX 3 3 ASN A 50 ILE A 65 1 16 HELIX 4 4 THR A 66 ALA A 74 1 9 HELIX 5 5 HIS A 114 ALA A 119 1 6 HELIX 6 6 GLY A 137 LEU A 164 1 28 HELIX 7 7 PHE A 171 PHE A 175 5 5 HELIX 8 8 PRO A 196 ILE A 200 5 5 HELIX 9 9 GLY A 254 THR A 261 1 8 HELIX 10 10 SER A 312 GLY A 329 1 18 SHEET 1 AA 8 LYS A 11 ASP A 13 0 SHEET 2 AA 8 PHE A 41 VAL A 45 1 O TYR A 43 N ILE A 12 SHEET 3 AA 8 TYR A 249 CYS A 253 -1 O TYR A 249 N ALA A 44 SHEET 4 AA 8 ILE A 220 GLN A 225 -1 O THR A 221 N ASN A 252 SHEET 5 AA 8 ARG A 279 VAL A 286 -1 O LEU A 282 N TYR A 224 SHEET 6 AA 8 SER A 183 TYR A 189 -1 O SER A 183 N PHE A 285 SHEET 7 AA 8 GLU A 101 TYR A 105 -1 O GLU A 101 N ARG A 188 SHEET 8 AA 8 GLY A 89 TYR A 91 -1 O GLY A 89 N CYS A 104 SHEET 1 AB 5 LYS A 201 THR A 202 0 SHEET 2 AB 5 LYS A 208 HIS A 214 -1 O LEU A 209 N LYS A 201 SHEET 3 AB 5 HIS A 270 LYS A 273 -1 O HIS A 270 N HIS A 214 SHEET 4 AB 5 LEU A 231 THR A 235 -1 O GLN A 232 N ARG A 271 SHEET 5 AB 5 GLY A 238 ASP A 241 -1 O GLY A 238 N THR A 235 LINK NE2 HIS A 214 FE FE A1333 1555 1555 2.26 LINK OD1 ASP A 216 FE FE A1333 1555 1555 2.08 LINK NE2 HIS A 270 FE FE A1333 1555 1555 2.36 LINK SAF M9F A1332 FE FE A1333 1555 1555 2.46 LINK SAM M9F A1332 FE FE A1333 1555 1555 2.66 LINK FE FE A1333 O HOH A2214 1555 1555 2.20 CISPEP 1 ASP A 193 PRO A 194 0 -4.44 SITE 1 AC1 18 ARG A 87 TYR A 91 SER A 183 TYR A 189 SITE 2 AC1 18 PHE A 211 HIS A 214 ASP A 216 LEU A 231 SITE 3 AC1 18 VAL A 272 SER A 281 PHE A 285 LEU A 324 SITE 4 AC1 18 FE A1333 HOH A2287 HOH A2288 HOH A2289 SITE 5 AC1 18 HOH A2290 HOH A2291 SITE 1 AC2 5 HIS A 214 ASP A 216 HIS A 270 M9F A1332 SITE 2 AC2 5 HOH A2214 SITE 1 AC3 7 ARG A 53 ASP A 140 PHE A 141 HOH A2149 SITE 2 AC3 7 HOH A2293 HOH A2294 HOH A2295 CRYST1 47.396 73.349 102.476 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021099 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013633 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009758 0.00000