HEADER HYDROLASE 11-FEB-11 2Y96 TITLE STRUCTURE OF HUMAN DUAL-SPECIFICITY PHOSPHATASE 27 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PHOSPHATASE DUPD1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-220; COMPND 5 SYNONYM: HUMAN DUAL-SPECIFICITY PHOSPHATASE 27; COMPND 6 EC: 3.1.3.16, 3.1.3.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PJT154 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.T.LOUNTOS,J.E.TROPEA,D.S.WAUGH REVDAT 3 20-DEC-23 2Y96 1 REMARK REVDAT 2 01-JUN-11 2Y96 1 JRNL REMARK SITE REVDAT 1 27-APR-11 2Y96 0 JRNL AUTH G.T.LOUNTOS,J.E.TROPEA,D.S.WAUGH JRNL TITL STRUCTURE OF HUMAN DUAL-SPECIFICITY PHOSPHATASE AT 2.38A JRNL TITL 2 RESOLUTION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 471 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 21543850 JRNL DOI 10.1107/S090744491100970X REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0104 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 22618 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1220 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1596 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2758 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.256 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.924 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2872 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1938 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3899 ; 1.514 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4676 ; 0.912 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 341 ; 6.107 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;33.410 ;23.014 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 474 ;15.673 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;16.264 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 416 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3177 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 627 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1703 ; 0.752 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 684 ; 0.153 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2741 ; 1.448 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1169 ; 2.206 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1157 ; 3.482 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): -15.2950 -32.8260 -7.5070 REMARK 3 T TENSOR REMARK 3 T11: 0.4434 T22: 0.4194 REMARK 3 T33: 0.1948 T12: 0.0982 REMARK 3 T13: 0.1177 T23: 0.0809 REMARK 3 L TENSOR REMARK 3 L11: 4.2202 L22: -0.0112 REMARK 3 L33: 0.2615 L12: 0.3571 REMARK 3 L13: -0.7883 L23: 0.3708 REMARK 3 S TENSOR REMARK 3 S11: 0.1073 S12: 0.1237 S13: 0.6340 REMARK 3 S21: -0.2225 S22: 0.0037 S23: -0.0039 REMARK 3 S31: -0.4656 S32: -0.0608 S33: -0.1111 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 205 REMARK 3 ORIGIN FOR THE GROUP (A): -22.5510 -48.1690 -6.8500 REMARK 3 T TENSOR REMARK 3 T11: 0.2166 T22: 0.4435 REMARK 3 T33: 0.1093 T12: 0.1021 REMARK 3 T13: 0.0594 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.5083 L22: 2.4141 REMARK 3 L33: 1.6761 L12: 0.4672 REMARK 3 L13: -0.1497 L23: 0.4845 REMARK 3 S TENSOR REMARK 3 S11: 0.0887 S12: 0.1415 S13: -0.0455 REMARK 3 S21: -0.2752 S22: -0.1199 S23: -0.0744 REMARK 3 S31: -0.0674 S32: -0.0257 S33: 0.0312 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 32 B 103 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8970 -57.3840 -15.9870 REMARK 3 T TENSOR REMARK 3 T11: 0.2273 T22: 0.4216 REMARK 3 T33: 0.2180 T12: -0.0901 REMARK 3 T13: 0.0809 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 3.2269 L22: 0.3772 REMARK 3 L33: 2.8827 L12: -0.6565 REMARK 3 L13: -1.8567 L23: -0.7521 REMARK 3 S TENSOR REMARK 3 S11: -0.1664 S12: 0.0934 S13: -0.3316 REMARK 3 S21: -0.0769 S22: 0.1768 S23: 0.2224 REMARK 3 S31: 0.2195 S32: -0.0868 S33: -0.0104 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 104 B 201 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0810 -43.2450 -21.7660 REMARK 3 T TENSOR REMARK 3 T11: 0.2229 T22: 0.3738 REMARK 3 T33: 0.1157 T12: -0.0914 REMARK 3 T13: 0.1063 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 2.9694 L22: 3.0292 REMARK 3 L33: 5.1858 L12: 0.8254 REMARK 3 L13: -0.0548 L23: 0.2284 REMARK 3 S TENSOR REMARK 3 S11: -0.0449 S12: 0.1884 S13: 0.1026 REMARK 3 S21: -0.1019 S22: 0.0257 S23: 0.0916 REMARK 3 S31: -0.6192 S32: 0.0150 S33: 0.0192 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Y96 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1290047333. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24047 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 16.10 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 48.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.50 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2PQ5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN, 0.2M AMMONIUM REMARK 280 SULFATE, 25% W/V PEG3350, ROOM TEMPERATURE, PH 6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.91933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 83.83867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 41.91933 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 83.83867 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 41.91933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 83.83867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 41.91933 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 83.83867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -281.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 GLY A 4 REMARK 465 GLU A 5 REMARK 465 VAL A 6 REMARK 465 LYS A 7 REMARK 465 THR A 8 REMARK 465 SER A 9 REMARK 465 LEU A 10 REMARK 465 LYS A 11 REMARK 465 ASN A 12 REMARK 465 ALA A 13 REMARK 465 TYR A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 ALA A 17 REMARK 465 LYS A 18 REMARK 465 ARG A 19 REMARK 465 LEU A 20 REMARK 465 SER A 21 REMARK 465 PRO A 22 REMARK 465 LYS A 23 REMARK 465 MET A 24 REMARK 465 GLU A 25 REMARK 465 GLU A 26 REMARK 465 GLU A 27 REMARK 465 GLY A 28 REMARK 465 GLU A 29 REMARK 465 GLU A 30 REMARK 465 GLU A 31 REMARK 465 SER A 207 REMARK 465 GLN A 208 REMARK 465 ARG A 209 REMARK 465 GLN A 210 REMARK 465 ASP A 211 REMARK 465 GLY A 212 REMARK 465 GLU A 213 REMARK 465 GLU A 214 REMARK 465 GLU A 215 REMARK 465 ASP A 216 REMARK 465 GLY A 217 REMARK 465 ARG A 218 REMARK 465 GLU A 219 REMARK 465 LEU A 220 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 GLY B 4 REMARK 465 GLU B 5 REMARK 465 VAL B 6 REMARK 465 LYS B 7 REMARK 465 THR B 8 REMARK 465 SER B 9 REMARK 465 LEU B 10 REMARK 465 LYS B 11 REMARK 465 ASN B 12 REMARK 465 ALA B 13 REMARK 465 TYR B 14 REMARK 465 SER B 15 REMARK 465 SER B 16 REMARK 465 ALA B 17 REMARK 465 LYS B 18 REMARK 465 ARG B 19 REMARK 465 LEU B 20 REMARK 465 SER B 21 REMARK 465 PRO B 22 REMARK 465 LYS B 23 REMARK 465 MET B 24 REMARK 465 GLU B 25 REMARK 465 GLU B 26 REMARK 465 GLU B 27 REMARK 465 GLY B 28 REMARK 465 GLU B 29 REMARK 465 GLU B 30 REMARK 465 GLU B 31 REMARK 465 GLY B 90 REMARK 465 ARG B 91 REMARK 465 TRP B 92 REMARK 465 ASN B 93 REMARK 465 VAL B 94 REMARK 465 GLN B 202 REMARK 465 GLN B 203 REMARK 465 ARG B 204 REMARK 465 ARG B 205 REMARK 465 ARG B 206 REMARK 465 SER B 207 REMARK 465 GLN B 208 REMARK 465 ARG B 209 REMARK 465 GLN B 210 REMARK 465 ASP B 211 REMARK 465 GLY B 212 REMARK 465 GLU B 213 REMARK 465 GLU B 214 REMARK 465 GLU B 215 REMARK 465 ASP B 216 REMARK 465 GLY B 217 REMARK 465 ARG B 218 REMARK 465 GLU B 219 REMARK 465 LEU B 220 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR B 74 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 93 -122.55 -119.23 REMARK 500 THR A 96 -76.23 -114.59 REMARK 500 ASP A 103 -1.89 70.78 REMARK 500 ASP A 105 47.38 71.84 REMARK 500 CYS A 147 -132.94 -134.45 REMARK 500 SER A 152 -65.08 -122.66 REMARK 500 LEU A 184 86.66 -154.92 REMARK 500 ASP B 66 -166.94 -103.48 REMARK 500 THR B 96 -65.52 -135.14 REMARK 500 CYS B 147 -149.23 -139.66 REMARK 500 SER B 152 -68.61 -122.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1203 DBREF 2Y96 A 2 220 UNP Q68J44 DUPD1_HUMAN 2 220 DBREF 2Y96 B 2 220 UNP Q68J44 DUPD1_HUMAN 2 220 SEQRES 1 A 219 THR SER GLY GLU VAL LYS THR SER LEU LYS ASN ALA TYR SEQRES 2 A 219 SER SER ALA LYS ARG LEU SER PRO LYS MET GLU GLU GLU SEQRES 3 A 219 GLY GLU GLU GLU ASP TYR CYS THR PRO GLY ALA PHE GLU SEQRES 4 A 219 LEU GLU ARG LEU PHE TRP LYS GLY SER PRO GLN TYR THR SEQRES 5 A 219 HIS VAL ASN GLU VAL TRP PRO LYS LEU TYR ILE GLY ASP SEQRES 6 A 219 GLU ALA THR ALA LEU ASP ARG TYR ARG LEU GLN LYS ALA SEQRES 7 A 219 GLY PHE THR HIS VAL LEU ASN ALA ALA HIS GLY ARG TRP SEQRES 8 A 219 ASN VAL ASP THR GLY PRO ASP TYR TYR ARG ASP MET ASP SEQRES 9 A 219 ILE GLN TYR HIS GLY VAL GLU ALA ASP ASP LEU PRO THR SEQRES 10 A 219 PHE ASP LEU SER VAL PHE PHE TYR PRO ALA ALA ALA PHE SEQRES 11 A 219 ILE ASP ARG ALA LEU SER ASP ASP HIS SER LYS ILE LEU SEQRES 12 A 219 VAL HIS CYS VAL MET GLY ARG SER ARG SER ALA THR LEU SEQRES 13 A 219 VAL LEU ALA TYR LEU MET ILE HIS LYS ASP MET THR LEU SEQRES 14 A 219 VAL ASP ALA ILE GLN GLN VAL ALA LYS ASN ARG CYS VAL SEQRES 15 A 219 LEU PRO ASN ARG GLY PHE LEU LYS GLN LEU ARG GLU LEU SEQRES 16 A 219 ASP LYS GLN LEU VAL GLN GLN ARG ARG ARG SER GLN ARG SEQRES 17 A 219 GLN ASP GLY GLU GLU GLU ASP GLY ARG GLU LEU SEQRES 1 B 219 THR SER GLY GLU VAL LYS THR SER LEU LYS ASN ALA TYR SEQRES 2 B 219 SER SER ALA LYS ARG LEU SER PRO LYS MET GLU GLU GLU SEQRES 3 B 219 GLY GLU GLU GLU ASP TYR CYS THR PRO GLY ALA PHE GLU SEQRES 4 B 219 LEU GLU ARG LEU PHE TRP LYS GLY SER PRO GLN TYR THR SEQRES 5 B 219 HIS VAL ASN GLU VAL TRP PRO LYS LEU TYR ILE GLY ASP SEQRES 6 B 219 GLU ALA THR ALA LEU ASP ARG TYR ARG LEU GLN LYS ALA SEQRES 7 B 219 GLY PHE THR HIS VAL LEU ASN ALA ALA HIS GLY ARG TRP SEQRES 8 B 219 ASN VAL ASP THR GLY PRO ASP TYR TYR ARG ASP MET ASP SEQRES 9 B 219 ILE GLN TYR HIS GLY VAL GLU ALA ASP ASP LEU PRO THR SEQRES 10 B 219 PHE ASP LEU SER VAL PHE PHE TYR PRO ALA ALA ALA PHE SEQRES 11 B 219 ILE ASP ARG ALA LEU SER ASP ASP HIS SER LYS ILE LEU SEQRES 12 B 219 VAL HIS CYS VAL MET GLY ARG SER ARG SER ALA THR LEU SEQRES 13 B 219 VAL LEU ALA TYR LEU MET ILE HIS LYS ASP MET THR LEU SEQRES 14 B 219 VAL ASP ALA ILE GLN GLN VAL ALA LYS ASN ARG CYS VAL SEQRES 15 B 219 LEU PRO ASN ARG GLY PHE LEU LYS GLN LEU ARG GLU LEU SEQRES 16 B 219 ASP LYS GLN LEU VAL GLN GLN ARG ARG ARG SER GLN ARG SEQRES 17 B 219 GLN ASP GLY GLU GLU GLU ASP GLY ARG GLU LEU HET SO4 A1207 5 HET SO4 A1208 5 HET SO4 A1209 5 HET SO4 A1210 5 HET SO4 A1211 5 HET SO4 B1202 5 HET SO4 B1203 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 7(O4 S 2-) FORMUL 10 HOH *137(H2 O) HELIX 1 1 GLY A 37 GLY A 48 1 12 HELIX 2 2 ASP A 66 ASP A 72 1 7 HELIX 3 3 ASP A 72 ALA A 79 1 8 HELIX 4 4 THR A 96 TYR A 101 1 6 HELIX 5 5 ASP A 120 VAL A 123 5 4 HELIX 6 6 PHE A 124 SER A 137 1 14 HELIX 7 7 SER A 152 LYS A 166 1 15 HELIX 8 8 THR A 169 LYS A 179 1 11 HELIX 9 9 ASN A 186 ARG A 206 1 21 HELIX 10 10 GLY B 37 GLY B 48 1 12 HELIX 11 11 ASP B 66 ASP B 72 1 7 HELIX 12 12 ASP B 72 ALA B 79 1 8 HELIX 13 13 GLY B 97 ASP B 103 1 7 HELIX 14 14 ASP B 120 VAL B 123 5 4 HELIX 15 15 PHE B 124 ASP B 138 1 15 HELIX 16 16 SER B 152 LYS B 166 1 15 HELIX 17 17 THR B 169 LYS B 179 1 11 HELIX 18 18 ASN B 186 VAL B 201 1 16 SHEET 1 AA 5 VAL A 55 TRP A 59 0 SHEET 2 AA 5 LEU A 62 GLY A 65 -1 O LEU A 62 N VAL A 58 SHEET 3 AA 5 ILE A 143 HIS A 146 1 O ILE A 143 N TYR A 63 SHEET 4 AA 5 HIS A 83 ASN A 86 1 O HIS A 83 N LEU A 144 SHEET 5 AA 5 GLN A 107 GLY A 110 1 O GLN A 107 N VAL A 84 SHEET 1 BA 5 VAL B 55 TRP B 59 0 SHEET 2 BA 5 LEU B 62 GLY B 65 -1 O LEU B 62 N VAL B 58 SHEET 3 BA 5 ILE B 143 HIS B 146 1 O ILE B 143 N TYR B 63 SHEET 4 BA 5 HIS B 83 ASN B 86 1 O HIS B 83 N LEU B 144 SHEET 5 BA 5 GLN B 107 GLY B 110 1 O GLN B 107 N VAL B 84 CISPEP 1 SER A 49 PRO A 50 0 -16.78 CISPEP 2 SER B 49 PRO B 50 0 -9.52 SITE 1 AC1 10 ASP A 115 CYS A 147 VAL A 148 MET A 149 SITE 2 AC1 10 GLY A 150 ARG A 151 SER A 152 ARG A 153 SITE 3 AC1 10 HOH A2037 HOH A2075 SITE 1 AC2 3 THR A 53 HIS A 54 VAL A 55 SITE 1 AC3 2 ARG A 73 ARG A 102 SITE 1 AC4 8 HIS A 109 PHE A 131 ARG A 134 GLN A 202 SITE 2 AC4 8 GLN A 203 HOH A2048 HOH A2050 HOH A2072 SITE 1 AC5 3 GLN A 51 ASN A 56 GLU A 57 SITE 1 AC6 8 ASP B 115 CYS B 147 VAL B 148 MET B 149 SITE 2 AC6 8 GLY B 150 ARG B 151 SER B 152 ARG B 153 SITE 1 AC7 2 VAL B 148 ARG B 153 CRYST1 126.012 126.012 125.758 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007936 0.004582 0.000000 0.00000 SCALE2 0.000000 0.009163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007952 0.00000