HEADER TRANSCRIPTION 02-MAR-11 2YB8 TITLE CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH SU(Z)12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYCOMB PROTEIN SU(Z)12; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NURF55 BINDING EPITOPE, RESIDUES 79-91; COMPND 5 SYNONYM: SUPPRESSOR 12 OF ZESTE PROTEIN, SUZ12; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: PRODUCT OF SUBTILIN PROTEOLYSIS; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROBABLE HISTONE-BINDING PROTEIN CAF1; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: RESIDUES 1-418; COMPND 12 SYNONYM: CHROMATIN ASSEMBLY FACTOR 1 P55 SUBUNIT, CAF-1 P55 SUBUNIT, COMPND 13 NUCLEOSOME-REMODELING FACTOR 55 KDA SUBUNIT, NURF-55, DCAF-1, NURF55; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 12 ORGANISM_COMMON: FRUIT FLY; SOURCE 13 ORGANISM_TAXID: 7227; SOURCE 14 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 15 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS TRANSCRIPTION, HISTONE METHLYATION, CHROMATIN REMODELLING, P55, KEYWDS 2 RBBP4, RBBP7, RBAP46, RBAP48, PRC2, H4, H3K27, H3K4, WD40 DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR F.W.SCHMITGES,A.B.PRUSTY,M.FATY,A.STUTZER,G.M.LINGARAJU,J.AIWAZIAN, AUTHOR 2 R.SACK,D.HESS,L.LI,S.ZHOU,R.D.BUNKER,U.WIRTH,T.BOUWMEESTER,A.BAUER, AUTHOR 3 N.LY-HARTIG,K.ZHAO,H.CHAN,J.GU,H.GUT,W.FISCHLE,J.MULLER,N.H.THOMA REVDAT 3 08-MAY-24 2YB8 1 REMARK REVDAT 2 03-APR-19 2YB8 1 SOURCE REVDAT 1 18-MAY-11 2YB8 0 JRNL AUTH F.W.SCHMITGES,A.B.PRUSTY,M.FATY,A.STUTZER,G.M.LINGARAJU, JRNL AUTH 2 J.AIWAZIAN,R.SACK,D.HESS,L.LI,S.ZHOU,R.D.BUNKER,U.WIRTH, JRNL AUTH 3 T.BOUWMEESTER,A.BAUER,N.LY-HARTIG,K.ZHAO,H.CHAN,J.GU,H.GUT, JRNL AUTH 4 W.FISCHLE,J.MULLER,N.H.THOMA JRNL TITL HISTONE METHYLATION BY PRC2 IS INHIBITED BY ACTIVE CHROMATIN JRNL TITL 2 MARKS. JRNL REF MOL.CELL V. 42 330 2011 JRNL REFN ISSN 1097-2765 JRNL PMID 21549310 JRNL DOI 10.1016/J.MOLCEL.2011.03.025 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 20982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1073 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.34 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2637 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1906 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2485 REMARK 3 BIN R VALUE (WORKING SET) : 0.1890 REMARK 3 BIN FREE R VALUE : 0.2182 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.76 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 152 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3072 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61040 REMARK 3 B22 (A**2) : 0.54770 REMARK 3 B33 (A**2) : -1.15810 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.265 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.180 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.253 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.179 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3167 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4327 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1417 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 88 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 449 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3167 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 418 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 1 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3564 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.79 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.74 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY. REMARK 4 REMARK 4 2YB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1290047538. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00069 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20984 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 15.60 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 43.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM POTASSIUM ACETATE, 2.1 M REMARK 280 AMMONIUM SULFATE. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.51550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.76950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.59450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.76950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.51550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.59450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 ARG B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ASP B 3 REMARK 465 ARG B 4 REMARK 465 SER B 5 REMARK 465 ASP B 6 REMARK 465 ASN B 7 REMARK 465 ALA B 8 REMARK 465 ALA B 9 REMARK 465 GLU B 10 REMARK 465 SER B 11 REMARK 465 PHE B 12 REMARK 465 ASP B 13 REMARK 465 ASP B 14 REMARK 465 ALA B 15 REMARK 465 GLU B 93 REMARK 465 ASP B 94 REMARK 465 ALA B 95 REMARK 465 GLN B 96 REMARK 465 PHE B 97 REMARK 465 ASP B 98 REMARK 465 GLY B 99 REMARK 465 SER B 100 REMARK 465 HIS B 101 REMARK 465 TYR B 102 REMARK 465 ASP B 103 REMARK 465 ASN B 104 REMARK 465 GLU B 105 REMARK 465 LYS B 106 REMARK 465 GLY B 107 REMARK 465 GLU B 108 REMARK 465 PHE B 109 REMARK 465 GLY B 110 REMARK 465 GLY B 111 REMARK 465 PHE B 112 REMARK 465 GLY B 113 REMARK 465 SER B 114 REMARK 465 VAL B 115 REMARK 465 CYS B 116 REMARK 465 ASP B 415 REMARK 465 GLU B 416 REMARK 465 GLU B 417 REMARK 465 PRO B 418 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 18 CG CD OE1 OE2 REMARK 470 ARG B 19 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 LYS B 30 CG CD CE NZ REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 ASP B 61 CG OD1 OD2 REMARK 470 ASP B 78 CG OD1 OD2 REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 LYS B 164 CG CD CE NZ REMARK 470 LYS B 268 CG CD CE NZ REMARK 470 HIS B 320 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 321 CG CD CE NZ REMARK 470 GLU B 357 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 140 92.61 -163.41 REMARK 500 PRO B 149 36.43 -80.59 REMARK 500 GLU B 217 -114.23 27.57 REMARK 500 ASN B 309 68.69 -150.19 REMARK 500 LYS B 321 44.38 39.92 REMARK 500 TRP B 392 -1.74 76.62 REMARK 500 ASN B 401 9.89 87.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1417 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XYI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH A H4 PEPTIDE REMARK 900 RELATED ID: 2YBA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NURF55 IN COMPLEX WITH HISTONE H3 REMARK 999 REMARK 999 SEQUENCE REMARK 999 STARTING MATERIAL FOR CRYSTALLIZATION INCLUDED RESIDUES REMARK 999 64-359 OF SU(Z)12 BEFORE PROTEOLYSIS BUT PROTEIN WAS TREATED REMARK 999 WITH 0.01 PERCENT SUBTILISIN PRIOR TO CRYSTALLIZATION. THUS REMARK 999 MOST OF SUZ12 IS NOT PRESENT IN THE CRYSTAL STRUCTURE. DBREF 2YB8 A 79 91 UNP Q9NJG9 SUZ12_DROME 79 91 DBREF 2YB8 B 1 418 UNP Q24572 CAF1_DROME 1 418 SEQADV 2YB8 GLY B -3 UNP Q24572 EXPRESSION TAG SEQADV 2YB8 GLY B -2 UNP Q24572 EXPRESSION TAG SEQADV 2YB8 GLY B -1 UNP Q24572 EXPRESSION TAG SEQADV 2YB8 ARG B 0 UNP Q24572 EXPRESSION TAG SEQRES 1 A 13 ASN PRO ILE PHE LEU ASN ARG THR LEU SER TYR MET LYS SEQRES 1 B 422 GLY GLY GLY ARG MET VAL ASP ARG SER ASP ASN ALA ALA SEQRES 2 B 422 GLU SER PHE ASP ASP ALA VAL GLU GLU ARG VAL ILE ASN SEQRES 3 B 422 GLU GLU TYR LYS ILE TRP LYS LYS ASN THR PRO PHE LEU SEQRES 4 B 422 TYR ASP LEU VAL MET THR HIS ALA LEU GLU TRP PRO SER SEQRES 5 B 422 LEU THR ALA GLN TRP LEU PRO ASP VAL THR LYS GLN ASP SEQRES 6 B 422 GLY LYS ASP TYR SER VAL HIS ARG LEU ILE LEU GLY THR SEQRES 7 B 422 HIS THR SER ASP GLU GLN ASN HIS LEU LEU ILE ALA SER SEQRES 8 B 422 VAL GLN LEU PRO SER GLU ASP ALA GLN PHE ASP GLY SER SEQRES 9 B 422 HIS TYR ASP ASN GLU LYS GLY GLU PHE GLY GLY PHE GLY SEQRES 10 B 422 SER VAL CYS GLY LYS ILE GLU ILE GLU ILE LYS ILE ASN SEQRES 11 B 422 HIS GLU GLY GLU VAL ASN ARG ALA ARG TYR MET PRO GLN SEQRES 12 B 422 ASN ALA CYS VAL ILE ALA THR LYS THR PRO SER SER ASP SEQRES 13 B 422 VAL LEU VAL PHE ASP TYR THR LYS HIS PRO SER LYS PRO SEQRES 14 B 422 GLU PRO SER GLY GLU CYS GLN PRO ASP LEU ARG LEU ARG SEQRES 15 B 422 GLY HIS GLN LYS GLU GLY TYR GLY LEU SER TRP ASN PRO SEQRES 16 B 422 ASN LEU ASN GLY TYR LEU LEU SER ALA SER ASP ASP HIS SEQRES 17 B 422 THR ILE CYS LEU TRP ASP ILE ASN ALA THR PRO LYS GLU SEQRES 18 B 422 HIS ARG VAL ILE ASP ALA LYS ASN ILE PHE THR GLY HIS SEQRES 19 B 422 THR ALA VAL VAL GLU ASP VAL ALA TRP HIS LEU LEU HIS SEQRES 20 B 422 GLU SER LEU PHE GLY SER VAL ALA ASP ASP GLN LYS LEU SEQRES 21 B 422 MET ILE TRP ASP THR ARG ASN ASN ASN THR SER LYS PRO SEQRES 22 B 422 SER HIS THR VAL ASP ALA HIS THR ALA GLU VAL ASN CYS SEQRES 23 B 422 LEU SER PHE ASN PRO TYR SER GLU PHE ILE LEU ALA THR SEQRES 24 B 422 GLY SER ALA ASP LYS THR VAL ALA LEU TRP ASP LEU ARG SEQRES 25 B 422 ASN LEU LYS LEU LYS LEU HIS SER PHE GLU SER HIS LYS SEQRES 26 B 422 ASP GLU ILE PHE GLN VAL GLN TRP SER PRO HIS ASN GLU SEQRES 27 B 422 THR ILE LEU ALA SER SER GLY THR ASP ARG ARG LEU HIS SEQRES 28 B 422 VAL TRP ASP LEU SER LYS ILE GLY GLU GLU GLN SER THR SEQRES 29 B 422 GLU ASP ALA GLU ASP GLY PRO PRO GLU LEU LEU PHE ILE SEQRES 30 B 422 HIS GLY GLY HIS THR ALA LYS ILE SER ASP PHE SER TRP SEQRES 31 B 422 ASN PRO ASN GLU PRO TRP ILE ILE CYS SER VAL SER GLU SEQRES 32 B 422 ASP ASN ILE MET GLN VAL TRP GLN MET ALA GLU ASN VAL SEQRES 33 B 422 TYR ASN ASP GLU GLU PRO HET SO4 B1415 5 HET SO4 B1416 5 HET SO4 B1417 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *144(H2 O) HELIX 1 1 LEU A 83 LEU A 87 5 5 HELIX 2 2 LEU A 87 LYS A 91 5 5 HELIX 3 3 VAL B 16 LEU B 35 1 20 HELIX 4 4 THR B 159 HIS B 161 5 3 HELIX 5 5 SER B 352 ILE B 354 5 3 HELIX 6 6 GLU B 361 ASP B 365 5 5 HELIX 7 7 ALA B 409 ASN B 414 1 6 SHEET 1 BA 4 TYR B 36 ALA B 43 0 SHEET 2 BA 4 ILE B 402 MET B 408 -1 O MET B 403 N HIS B 42 SHEET 3 BA 4 ILE B 393 SER B 398 -1 O ILE B 394 N TRP B 406 SHEET 4 BA 4 ILE B 381 TRP B 386 -1 N SER B 382 O VAL B 397 SHEET 1 BB 4 ALA B 51 LYS B 59 0 SHEET 2 BB 4 TYR B 65 GLY B 73 -1 O VAL B 67 N THR B 58 SHEET 3 BB 4 ASN B 81 PRO B 91 -1 O LEU B 84 N LEU B 72 SHEET 4 BB 4 ILE B 119 HIS B 127 -1 O GLU B 120 N SER B 87 SHEET 1 BC 5 ARG B 133 MET B 137 0 SHEET 2 BC 5 ASN B 140 LYS B 147 -1 N ASN B 140 O MET B 137 SHEET 3 BC 5 VAL B 153 ASP B 157 -1 O LEU B 154 N THR B 146 SHEET 4 BC 5 LEU B 175 ARG B 178 -1 O LEU B 175 N VAL B 155 SHEET 5 BC 5 VAL B 220 ASP B 222 1 O ILE B 221 N ARG B 178 SHEET 1 BD 4 LEU B 187 TRP B 189 0 SHEET 2 BD 4 TYR B 196 ALA B 200 -1 O LEU B 198 N SER B 188 SHEET 3 BD 4 ILE B 206 ASP B 210 -1 O CYS B 207 N SER B 199 SHEET 4 BD 4 ASN B 225 PHE B 227 -1 O ASN B 225 N LEU B 208 SHEET 1 BE 4 VAL B 234 TRP B 239 0 SHEET 2 BE 4 LEU B 246 ALA B 251 -1 O GLY B 248 N ALA B 238 SHEET 3 BE 4 LEU B 256 ASP B 260 -1 O MET B 257 N SER B 249 SHEET 4 BE 4 HIS B 271 VAL B 273 -1 O HIS B 271 N ILE B 258 SHEET 1 BF 4 VAL B 280 PHE B 285 0 SHEET 2 BF 4 ILE B 292 SER B 297 -1 O ALA B 294 N SER B 284 SHEET 3 BF 4 THR B 301 ASP B 306 -1 O THR B 301 N SER B 297 SHEET 4 BF 4 HIS B 315 GLU B 318 -1 O HIS B 315 N LEU B 304 SHEET 1 BG 4 GLN B 326 TRP B 329 0 SHEET 2 BG 4 ILE B 336 SER B 340 -1 O ALA B 338 N GLN B 328 SHEET 3 BG 4 LEU B 346 ASP B 350 -1 O HIS B 347 N SER B 339 SHEET 4 BG 4 LEU B 370 HIS B 374 -1 N LEU B 371 O VAL B 348 SITE 1 AC1 8 ARG B 135 LEU B 187 GLN B 326 GLN B 328 SITE 2 AC1 8 HOH B2044 HOH B2062 HOH B2087 HOH B2139 SITE 1 AC2 8 ILE B 125 ASN B 126 HIS B 161 PRO B 165 SITE 2 AC2 8 GLU B 166 HOH B2038 HOH B2039 HOH B2056 SITE 1 AC3 4 SER B 270 HIS B 271 THR B 272 HOH B2105 CRYST1 53.031 87.189 99.539 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018857 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011469 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010046 0.00000