data_2YH1 # _entry.id 2YH1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YH1 pdb_00002yh1 10.2210/pdb2yh1/pdb PDBE EBI-48116 ? ? WWPDB D_1290048116 ? ? BMRB 17623 ? 10.13018/BMR17623 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-20 2 'Structure model' 1 1 2011-07-27 3 'Structure model' 1 2 2019-09-25 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other 4 3 'Structure model' 'Data collection' 5 3 'Structure model' Other 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_database_status 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' struct_sheet # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_database_status.status_code_mr' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_struct_sheet.number_strands' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YH1 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-04-26 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2U2F unspecified 'SOLUTION STRUCTURE OF THE SECOND RIBONUCLEIC ACID- BINDING DOMAIN OF HU2AF65' PDB 1U2F unspecified 'SOLUTION STRUCTURE OF THE FIRST RIBONUCLEIC ACID-BINDING DOMAIN OF HU2AF65' PDB 1O0P unspecified 'SOLUTION STRUCTURE OF THE THIRD RNA RECOGNITION MOTIF ( RRM)OF U2AF65 IN COMPLEX WITH AN N-TERMINAL SF1 PEPTIDE' PDB 1OPI unspecified 'SOLUTION STRUCTURE OF THE THIRD RNA RECOGNITION MOTIF ( RRM)OF U2AF65 IN COMPLEX WITH AN N-TERMINAL SF1 PEPTIDE' PDB 2G4B unspecified 'STRUCTURE OF U2AF65 VARIANT WITH POLYURIDINE TRACT' PDB 1JMT unspecified 'X-RAY STRUCTURE OF A CORE U2AF65/U2AF35 HETERODIMER' PDB 2YH0 unspecified 'SOLUTION STRUCTURE OF THE CLOSED CONFORMATION OF HUMAN U2AF65 TANDEM RRM1 AND RRM2 DOMAINS' PDB 2YH4 unspecified 'SOLUTION STRUCTURE OF THE OPEN CONFORMATION OF HUMAN U2AF65 TANDEM RRM1 AND RRM2 DOMAINS' BMRB 17623 unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mackereth, C.D.' 1 'Madl, T.' 2 'Simon, B.' 3 'Zanier, K.' 4 'Gasch, A.' 5 'Sattler, M.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af' Nature 475 408 ? 2011 NATUAS UK 0028-0836 0006 ? 21753750 10.1038/NATURE10171 1 'Structural Basis for Polypyrimidine Tract Recognition by the Essential Pre-Mrna Splicing Factor U2Af65.' Mol.Cell 23 49 ? 2006 MOCEFL US 1097-2765 2168 ? 16818232 10.1016/J.MOLCEL.2006.05.025 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mackereth, C.D.' 1 ? primary 'Madl, T.' 2 ? primary 'Bonnal, S.' 3 ? primary 'Simon, B.' 4 ? primary 'Zanier, K.' 5 ? primary 'Gasch, A.' 6 ? primary 'Rybin, V.' 7 ? primary 'Valcarcel, J.' 8 ? primary 'Sattler, M.' 9 ? 1 'Sickmier, E.A.' 10 ? 1 'Frato, K.E.' 11 ? 1 'Shen, H.' 12 ? 1 'Paranawithana, S.R.' 13 ? 1 'Green, M.R.' 14 ? 1 'Kielkopf, C.L.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SPLICING FACTOR U2AF 65 KDA SUBUNIT' 21510.525 1 ? ? 'TANDEM RRM1 AND RRM2 DOMAINS JOINED BY NATIVE LINKER, RESIDUES 148-342' ;STRUCTURE BASED ON DATA FROM TEN CYSTEINE MUTANTS (N155C, A164C, A171C, L187C, A188C, T209C, D273C, S281C, A287C AND A318C) COVALENTLY MODIFIED BY 3-(2-IODOACETAMIDO)-2,2,5,5, TETRAMETHYL-1-PYRROLIDINYLOXY RADICAL (IODOACETAMIDO-PROXYL) ; 2 polymer syn "5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP)-3'" 2710.535 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'U2 AUXILIARY FACTOR 65 KDA SUBUNIT, HUMAN U2AF65, U2 SNRNP AUXILIARY FACTOR LARGE SUBUNIT, HU2AF(65)' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSL KIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF CEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA ; ;GAMARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSL KIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAF CEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA ; A ? 2 polyribonucleotide no no UUUUUUUUU UUUUUUUUU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ALA n 1 5 ARG n 1 6 ARG n 1 7 LEU n 1 8 TYR n 1 9 VAL n 1 10 GLY n 1 11 ASN n 1 12 ILE n 1 13 PRO n 1 14 PHE n 1 15 GLY n 1 16 ILE n 1 17 THR n 1 18 GLU n 1 19 GLU n 1 20 ALA n 1 21 MET n 1 22 MET n 1 23 ASP n 1 24 PHE n 1 25 PHE n 1 26 ASN n 1 27 ALA n 1 28 GLN n 1 29 MET n 1 30 ARG n 1 31 LEU n 1 32 GLY n 1 33 GLY n 1 34 LEU n 1 35 THR n 1 36 GLN n 1 37 ALA n 1 38 PRO n 1 39 GLY n 1 40 ASN n 1 41 PRO n 1 42 VAL n 1 43 LEU n 1 44 ALA n 1 45 VAL n 1 46 GLN n 1 47 ILE n 1 48 ASN n 1 49 GLN n 1 50 ASP n 1 51 LYS n 1 52 ASN n 1 53 PHE n 1 54 ALA n 1 55 PHE n 1 56 LEU n 1 57 GLU n 1 58 PHE n 1 59 ARG n 1 60 SER n 1 61 VAL n 1 62 ASP n 1 63 GLU n 1 64 THR n 1 65 THR n 1 66 GLN n 1 67 ALA n 1 68 MET n 1 69 ALA n 1 70 PHE n 1 71 ASP n 1 72 GLY n 1 73 ILE n 1 74 ILE n 1 75 PHE n 1 76 GLN n 1 77 GLY n 1 78 GLN n 1 79 SER n 1 80 LEU n 1 81 LYS n 1 82 ILE n 1 83 ARG n 1 84 ARG n 1 85 PRO n 1 86 HIS n 1 87 ASP n 1 88 TYR n 1 89 GLN n 1 90 PRO n 1 91 LEU n 1 92 PRO n 1 93 GLY n 1 94 MET n 1 95 SER n 1 96 GLU n 1 97 ASN n 1 98 PRO n 1 99 SER n 1 100 VAL n 1 101 TYR n 1 102 VAL n 1 103 PRO n 1 104 GLY n 1 105 VAL n 1 106 VAL n 1 107 SER n 1 108 THR n 1 109 VAL n 1 110 VAL n 1 111 PRO n 1 112 ASP n 1 113 SER n 1 114 ALA n 1 115 HIS n 1 116 LYS n 1 117 LEU n 1 118 PHE n 1 119 ILE n 1 120 GLY n 1 121 GLY n 1 122 LEU n 1 123 PRO n 1 124 ASN n 1 125 TYR n 1 126 LEU n 1 127 ASN n 1 128 ASP n 1 129 ASP n 1 130 GLN n 1 131 VAL n 1 132 LYS n 1 133 GLU n 1 134 LEU n 1 135 LEU n 1 136 THR n 1 137 SER n 1 138 PHE n 1 139 GLY n 1 140 PRO n 1 141 LEU n 1 142 LYS n 1 143 ALA n 1 144 PHE n 1 145 ASN n 1 146 LEU n 1 147 VAL n 1 148 LYS n 1 149 ASP n 1 150 SER n 1 151 ALA n 1 152 THR n 1 153 GLY n 1 154 LEU n 1 155 SER n 1 156 LYS n 1 157 GLY n 1 158 TYR n 1 159 ALA n 1 160 PHE n 1 161 CYS n 1 162 GLU n 1 163 TYR n 1 164 VAL n 1 165 ASP n 1 166 ILE n 1 167 ASN n 1 168 VAL n 1 169 THR n 1 170 ASP n 1 171 GLN n 1 172 ALA n 1 173 ILE n 1 174 ALA n 1 175 GLY n 1 176 LEU n 1 177 ASN n 1 178 GLY n 1 179 MET n 1 180 GLN n 1 181 LEU n 1 182 GLY n 1 183 ASP n 1 184 LYS n 1 185 LYS n 1 186 LEU n 1 187 LEU n 1 188 VAL n 1 189 GLN n 1 190 ARG n 1 191 ALA n 1 192 SER n 1 193 VAL n 1 194 GLY n 1 195 ALA n 1 196 LYS n 1 197 ASN n 1 198 ALA n 2 1 U n 2 2 U n 2 3 U n 2 4 U n 2 5 U n 2 6 U n 2 7 U n 2 8 U n 2 9 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant PLYSS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETM-11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 145 ? ? ? A . n A 1 2 ALA 2 146 ? ? ? A . n A 1 3 MET 3 147 ? ? ? A . n A 1 4 ALA 4 148 148 ALA ALA A . n A 1 5 ARG 5 149 149 ARG ARG A . n A 1 6 ARG 6 150 150 ARG ARG A . n A 1 7 LEU 7 151 151 LEU LEU A . n A 1 8 TYR 8 152 152 TYR TYR A . n A 1 9 VAL 9 153 153 VAL VAL A . n A 1 10 GLY 10 154 154 GLY GLY A . n A 1 11 ASN 11 155 155 ASN ASN A . n A 1 12 ILE 12 156 156 ILE ILE A . n A 1 13 PRO 13 157 157 PRO PRO A . n A 1 14 PHE 14 158 158 PHE PHE A . n A 1 15 GLY 15 159 159 GLY GLY A . n A 1 16 ILE 16 160 160 ILE ILE A . n A 1 17 THR 17 161 161 THR THR A . n A 1 18 GLU 18 162 162 GLU GLU A . n A 1 19 GLU 19 163 163 GLU GLU A . n A 1 20 ALA 20 164 164 ALA ALA A . n A 1 21 MET 21 165 165 MET MET A . n A 1 22 MET 22 166 166 MET MET A . n A 1 23 ASP 23 167 167 ASP ASP A . n A 1 24 PHE 24 168 168 PHE PHE A . n A 1 25 PHE 25 169 169 PHE PHE A . n A 1 26 ASN 26 170 170 ASN ASN A . n A 1 27 ALA 27 171 171 ALA ALA A . n A 1 28 GLN 28 172 172 GLN GLN A . n A 1 29 MET 29 173 173 MET MET A . n A 1 30 ARG 30 174 174 ARG ARG A . n A 1 31 LEU 31 175 175 LEU LEU A . n A 1 32 GLY 32 176 176 GLY GLY A . n A 1 33 GLY 33 177 177 GLY GLY A . n A 1 34 LEU 34 178 178 LEU LEU A . n A 1 35 THR 35 179 179 THR THR A . n A 1 36 GLN 36 180 180 GLN GLN A . n A 1 37 ALA 37 181 181 ALA ALA A . n A 1 38 PRO 38 182 182 PRO PRO A . n A 1 39 GLY 39 183 183 GLY GLY A . n A 1 40 ASN 40 184 184 ASN ASN A . n A 1 41 PRO 41 185 185 PRO PRO A . n A 1 42 VAL 42 186 186 VAL VAL A . n A 1 43 LEU 43 187 187 LEU LEU A . n A 1 44 ALA 44 188 188 ALA ALA A . n A 1 45 VAL 45 189 189 VAL VAL A . n A 1 46 GLN 46 190 190 GLN GLN A . n A 1 47 ILE 47 191 191 ILE ILE A . n A 1 48 ASN 48 192 192 ASN ASN A . n A 1 49 GLN 49 193 193 GLN GLN A . n A 1 50 ASP 50 194 194 ASP ASP A . n A 1 51 LYS 51 195 195 LYS LYS A . n A 1 52 ASN 52 196 196 ASN ASN A . n A 1 53 PHE 53 197 197 PHE PHE A . n A 1 54 ALA 54 198 198 ALA ALA A . n A 1 55 PHE 55 199 199 PHE PHE A . n A 1 56 LEU 56 200 200 LEU LEU A . n A 1 57 GLU 57 201 201 GLU GLU A . n A 1 58 PHE 58 202 202 PHE PHE A . n A 1 59 ARG 59 203 203 ARG ARG A . n A 1 60 SER 60 204 204 SER SER A . n A 1 61 VAL 61 205 205 VAL VAL A . n A 1 62 ASP 62 206 206 ASP ASP A . n A 1 63 GLU 63 207 207 GLU GLU A . n A 1 64 THR 64 208 208 THR THR A . n A 1 65 THR 65 209 209 THR THR A . n A 1 66 GLN 66 210 210 GLN GLN A . n A 1 67 ALA 67 211 211 ALA ALA A . n A 1 68 MET 68 212 212 MET MET A . n A 1 69 ALA 69 213 213 ALA ALA A . n A 1 70 PHE 70 214 214 PHE PHE A . n A 1 71 ASP 71 215 215 ASP ASP A . n A 1 72 GLY 72 216 216 GLY GLY A . n A 1 73 ILE 73 217 217 ILE ILE A . n A 1 74 ILE 74 218 218 ILE ILE A . n A 1 75 PHE 75 219 219 PHE PHE A . n A 1 76 GLN 76 220 220 GLN GLN A . n A 1 77 GLY 77 221 221 GLY GLY A . n A 1 78 GLN 78 222 222 GLN GLN A . n A 1 79 SER 79 223 223 SER SER A . n A 1 80 LEU 80 224 224 LEU LEU A . n A 1 81 LYS 81 225 225 LYS LYS A . n A 1 82 ILE 82 226 226 ILE ILE A . n A 1 83 ARG 83 227 227 ARG ARG A . n A 1 84 ARG 84 228 228 ARG ARG A . n A 1 85 PRO 85 229 229 PRO PRO A . n A 1 86 HIS 86 230 230 HIS HIS A . n A 1 87 ASP 87 231 231 ASP ASP A . n A 1 88 TYR 88 232 232 TYR TYR A . n A 1 89 GLN 89 233 233 GLN GLN A . n A 1 90 PRO 90 234 234 PRO PRO A . n A 1 91 LEU 91 235 235 LEU LEU A . n A 1 92 PRO 92 236 236 PRO PRO A . n A 1 93 GLY 93 237 237 GLY GLY A . n A 1 94 MET 94 238 238 MET MET A . n A 1 95 SER 95 239 239 SER SER A . n A 1 96 GLU 96 240 240 GLU GLU A . n A 1 97 ASN 97 241 241 ASN ASN A . n A 1 98 PRO 98 242 242 PRO PRO A . n A 1 99 SER 99 243 243 SER SER A . n A 1 100 VAL 100 244 244 VAL VAL A . n A 1 101 TYR 101 245 245 TYR TYR A . n A 1 102 VAL 102 246 246 VAL VAL A . n A 1 103 PRO 103 247 247 PRO PRO A . n A 1 104 GLY 104 248 248 GLY GLY A . n A 1 105 VAL 105 249 249 VAL VAL A . n A 1 106 VAL 106 250 250 VAL VAL A . n A 1 107 SER 107 251 251 SER SER A . n A 1 108 THR 108 252 252 THR THR A . n A 1 109 VAL 109 253 253 VAL VAL A . n A 1 110 VAL 110 254 254 VAL VAL A . n A 1 111 PRO 111 255 255 PRO PRO A . n A 1 112 ASP 112 256 256 ASP ASP A . n A 1 113 SER 113 257 257 SER SER A . n A 1 114 ALA 114 258 258 ALA ALA A . n A 1 115 HIS 115 259 259 HIS HIS A . n A 1 116 LYS 116 260 260 LYS LYS A . n A 1 117 LEU 117 261 261 LEU LEU A . n A 1 118 PHE 118 262 262 PHE PHE A . n A 1 119 ILE 119 263 263 ILE ILE A . n A 1 120 GLY 120 264 264 GLY GLY A . n A 1 121 GLY 121 265 265 GLY GLY A . n A 1 122 LEU 122 266 266 LEU LEU A . n A 1 123 PRO 123 267 267 PRO PRO A . n A 1 124 ASN 124 268 268 ASN ASN A . n A 1 125 TYR 125 269 269 TYR TYR A . n A 1 126 LEU 126 270 270 LEU LEU A . n A 1 127 ASN 127 271 271 ASN ASN A . n A 1 128 ASP 128 272 272 ASP ASP A . n A 1 129 ASP 129 273 273 ASP ASP A . n A 1 130 GLN 130 274 274 GLN GLN A . n A 1 131 VAL 131 275 275 VAL VAL A . n A 1 132 LYS 132 276 276 LYS LYS A . n A 1 133 GLU 133 277 277 GLU GLU A . n A 1 134 LEU 134 278 278 LEU LEU A . n A 1 135 LEU 135 279 279 LEU LEU A . n A 1 136 THR 136 280 280 THR THR A . n A 1 137 SER 137 281 281 SER SER A . n A 1 138 PHE 138 282 282 PHE PHE A . n A 1 139 GLY 139 283 283 GLY GLY A . n A 1 140 PRO 140 284 284 PRO PRO A . n A 1 141 LEU 141 285 285 LEU LEU A . n A 1 142 LYS 142 286 286 LYS LYS A . n A 1 143 ALA 143 287 287 ALA ALA A . n A 1 144 PHE 144 288 288 PHE PHE A . n A 1 145 ASN 145 289 289 ASN ASN A . n A 1 146 LEU 146 290 290 LEU LEU A . n A 1 147 VAL 147 291 291 VAL VAL A . n A 1 148 LYS 148 292 292 LYS LYS A . n A 1 149 ASP 149 293 293 ASP ASP A . n A 1 150 SER 150 294 294 SER SER A . n A 1 151 ALA 151 295 295 ALA ALA A . n A 1 152 THR 152 296 296 THR THR A . n A 1 153 GLY 153 297 297 GLY GLY A . n A 1 154 LEU 154 298 298 LEU LEU A . n A 1 155 SER 155 299 299 SER SER A . n A 1 156 LYS 156 300 300 LYS LYS A . n A 1 157 GLY 157 301 301 GLY GLY A . n A 1 158 TYR 158 302 302 TYR TYR A . n A 1 159 ALA 159 303 303 ALA ALA A . n A 1 160 PHE 160 304 304 PHE PHE A . n A 1 161 CYS 161 305 305 CYS CYS A . n A 1 162 GLU 162 306 306 GLU GLU A . n A 1 163 TYR 163 307 307 TYR TYR A . n A 1 164 VAL 164 308 308 VAL VAL A . n A 1 165 ASP 165 309 309 ASP ASP A . n A 1 166 ILE 166 310 310 ILE ILE A . n A 1 167 ASN 167 311 311 ASN ASN A . n A 1 168 VAL 168 312 312 VAL VAL A . n A 1 169 THR 169 313 313 THR THR A . n A 1 170 ASP 170 314 314 ASP ASP A . n A 1 171 GLN 171 315 315 GLN GLN A . n A 1 172 ALA 172 316 316 ALA ALA A . n A 1 173 ILE 173 317 317 ILE ILE A . n A 1 174 ALA 174 318 318 ALA ALA A . n A 1 175 GLY 175 319 319 GLY GLY A . n A 1 176 LEU 176 320 320 LEU LEU A . n A 1 177 ASN 177 321 321 ASN ASN A . n A 1 178 GLY 178 322 322 GLY GLY A . n A 1 179 MET 179 323 323 MET MET A . n A 1 180 GLN 180 324 324 GLN GLN A . n A 1 181 LEU 181 325 325 LEU LEU A . n A 1 182 GLY 182 326 326 GLY GLY A . n A 1 183 ASP 183 327 327 ASP ASP A . n A 1 184 LYS 184 328 328 LYS LYS A . n A 1 185 LYS 185 329 329 LYS LYS A . n A 1 186 LEU 186 330 330 LEU LEU A . n A 1 187 LEU 187 331 331 LEU LEU A . n A 1 188 VAL 188 332 332 VAL VAL A . n A 1 189 GLN 189 333 333 GLN GLN A . n A 1 190 ARG 190 334 334 ARG ARG A . n A 1 191 ALA 191 335 335 ALA ALA A . n A 1 192 SER 192 336 336 SER SER A . n A 1 193 VAL 193 337 337 VAL VAL A . n A 1 194 GLY 194 338 338 GLY GLY A . n A 1 195 ALA 195 339 339 ALA ALA A . n A 1 196 LYS 196 340 340 LYS LYS A . n A 1 197 ASN 197 341 341 ASN ASN A . n A 1 198 ALA 198 342 342 ALA ALA A . n B 2 1 U 1 601 601 U U B . n B 2 2 U 2 602 602 U U B . n B 2 3 U 3 603 603 U U B . n B 2 4 U 4 604 604 U U B . n B 2 5 U 5 605 605 U U B . n B 2 6 U 6 606 606 U U B . n B 2 7 U 7 607 607 U U B . n B 2 8 U 8 608 608 U U B . n B 2 9 U 9 609 609 U U B . n # _cell.entry_id 2YH1 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YH1 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 2YH1 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 2YH1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YH1 _struct.title 'Model of human U2AF65 tandem RRM1 and RRM2 domains with eight-site uridine binding' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YH1 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TRANSCRIPTION, PRE-MRNA SPLICING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP U2AF2_HUMAN 1 ? ? P26368 ? 2 PDB 2YH1 2 ? ? 2YH1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YH1 A 4 ? 198 ? P26368 148 ? 342 ? 148 342 2 2 2YH1 B 1 ? 9 ? 2YH1 601 ? 609 ? 601 609 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YH1 GLY A 1 ? UNP P26368 ? ? 'expression tag' 145 1 1 2YH1 ALA A 2 ? UNP P26368 ? ? 'expression tag' 146 2 1 2YH1 MET A 3 ? UNP P26368 ? ? 'expression tag' 147 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 17 ? GLY A 33 ? THR A 161 GLY A 177 1 ? 17 HELX_P HELX_P2 2 SER A 60 ? MET A 68 ? SER A 204 MET A 212 1 ? 9 HELX_P HELX_P3 3 ALA A 69 ? ASP A 71 ? ALA A 213 ASP A 215 5 ? 3 HELX_P HELX_P4 4 ASN A 127 ? SER A 137 ? ASN A 271 SER A 281 1 ? 11 HELX_P HELX_P5 5 ASP A 165 ? ASN A 177 ? ASP A 309 ASN A 321 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 2 ? AC ? 3 ? AD ? 2 ? AE ? 2 ? AF ? 2 ? AG ? 2 ? AH ? 2 ? AI ? 2 ? AJ ? 4 ? AK ? 2 ? AL ? 2 ? AM ? 2 ? AN ? 2 ? AO ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AB 1 2 ? parallel AC 1 2 ? parallel AC 2 3 ? parallel AD 1 2 ? parallel AE 1 2 ? parallel AF 1 2 ? parallel AG 1 2 ? parallel AH 1 2 ? parallel AI 1 2 ? parallel AJ 1 2 ? parallel AJ 2 3 ? parallel AJ 3 4 ? parallel AK 1 2 ? parallel AL 1 2 ? parallel AM 1 2 ? parallel AN 1 2 ? parallel AO 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PHE A 14 ? GLY A 15 ? PHE A 158 GLY A 159 AA 2 PHE A 14 ? GLY A 15 ? PHE A 158 GLY A 159 AB 1 GLN A 180 ? LEU A 181 ? GLN A 324 LEU A 325 AB 2 GLN A 180 ? LEU A 181 ? GLN A 324 LEU A 325 AC 1 GLY A 194 ? LYS A 196 ? GLY A 338 LYS A 340 AC 2 ALA A 191 ? LYS A 196 ? ALA A 335 LYS A 340 AC 3 ALA A 195 ? LYS A 196 ? ALA A 339 LYS A 340 AD 1 TYR A 163 ? VAL A 164 ? TYR A 307 VAL A 308 AD 2 TYR A 163 ? VAL A 164 ? TYR A 307 VAL A 308 AE 1 ILE A 74 ? PHE A 75 ? ILE A 218 PHE A 219 AE 2 ILE A 74 ? PHE A 75 ? ILE A 218 PHE A 219 AF 1 ASN A 97 ? PRO A 98 ? ASN A 241 PRO A 242 AF 2 SER A 99 ? VAL A 100 ? SER A 243 VAL A 244 AG 1 LEU A 134 ? THR A 136 ? LEU A 278 THR A 280 AG 2 LEU A 134 ? THR A 136 ? LEU A 278 THR A 280 AH 1 ILE A 166 ? VAL A 168 ? ILE A 310 VAL A 312 AH 2 ILE A 166 ? VAL A 168 ? ILE A 310 VAL A 312 AI 1 VAL A 188 ? GLN A 189 ? VAL A 332 GLN A 333 AI 2 VAL A 188 ? GLN A 189 ? VAL A 332 GLN A 333 AJ 1 ASN A 48 ? GLN A 49 ? ASN A 192 GLN A 193 AJ 2 ASN A 48 ? ASP A 50 ? ASN A 192 ASP A 194 AJ 3 GLN A 49 ? ASN A 52 ? GLN A 193 ASN A 196 AJ 4 LYS A 51 ? ASN A 52 ? LYS A 195 ASN A 196 AK 1 THR A 64 ? ALA A 67 ? THR A 208 ALA A 211 AK 2 THR A 64 ? ALA A 67 ? THR A 208 ALA A 211 AL 1 PHE A 118 ? ILE A 119 ? PHE A 262 ILE A 263 AL 2 PHE A 118 ? ILE A 119 ? PHE A 262 ILE A 263 AM 1 VAL A 42 ? GLN A 46 ? VAL A 186 GLN A 190 AM 2 VAL A 42 ? GLN A 46 ? VAL A 186 GLN A 190 AN 1 ALA A 172 ? ILE A 173 ? ALA A 316 ILE A 317 AN 2 ALA A 172 ? ILE A 173 ? ALA A 316 ILE A 317 AO 1 LEU A 126 ? ASN A 127 ? LEU A 270 ASN A 271 AO 2 LEU A 126 ? ASN A 127 ? LEU A 270 ASN A 271 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLY A 15 ? N GLY A 159 O PHE A 14 ? O PHE A 158 AB 1 2 N LEU A 181 ? N LEU A 325 O GLN A 180 ? O GLN A 324 AC 1 2 N GLY A 194 ? N GLY A 338 O VAL A 193 ? O VAL A 337 AC 2 3 N LYS A 196 ? N LYS A 340 O ALA A 195 ? O ALA A 339 AD 1 2 N VAL A 164 ? N VAL A 308 O TYR A 163 ? O TYR A 307 AE 1 2 N PHE A 75 ? N PHE A 219 O ILE A 74 ? O ILE A 218 AF 1 2 N ASN A 97 ? N ASN A 241 O SER A 99 ? O SER A 243 AG 1 2 O LEU A 134 ? O LEU A 278 N LEU A 134 ? N LEU A 278 AH 1 2 N ASN A 167 ? N ASN A 311 O ILE A 166 ? O ILE A 310 AI 1 2 N GLN A 189 ? N GLN A 333 O VAL A 188 ? O VAL A 332 AJ 1 2 N GLN A 49 ? N GLN A 193 O ASN A 48 ? O ASN A 192 AJ 2 3 N ASP A 50 ? N ASP A 194 O GLN A 49 ? O GLN A 193 AJ 3 4 O LYS A 51 ? O LYS A 195 N LYS A 51 ? N LYS A 195 AK 1 2 N THR A 65 ? N THR A 209 O THR A 64 ? O THR A 208 AL 1 2 N ILE A 119 ? N ILE A 263 O PHE A 118 ? O PHE A 262 AM 1 2 N LEU A 43 ? N LEU A 187 O VAL A 42 ? O VAL A 186 AN 1 2 N ILE A 173 ? N ILE A 317 O ALA A 172 ? O ALA A 316 AO 1 2 N ASN A 127 ? N ASN A 271 O LEU A 126 ? O LEU A 270 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 0.82 2 1 NZ A LYS 300 ? ? "HO2'" B U 601 ? ? 1.11 3 1 HZ1 A LYS 225 ? ? "H2'" B U 604 ? ? 1.33 4 1 OD1 A ASP 231 ? ? O4 B U 607 ? ? 1.93 5 1 NZ A LYS 300 ? ? "O2'" B U 601 ? ? 1.96 6 2 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 1.17 7 2 NZ A LYS 300 ? ? "HO2'" B U 601 ? ? 1.38 8 2 OD2 A ASP 231 ? ? O4 B U 607 ? ? 1.62 9 2 OD2 A ASP 231 ? ? C4 B U 607 ? ? 2.09 10 2 NZ A LYS 300 ? ? "O2'" B U 601 ? ? 2.13 11 3 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 1.32 12 3 OD2 A ASP 231 ? ? O4 B U 607 ? ? 2.05 13 4 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 0.88 14 4 HD11 A LEU 331 ? ? H3 B U 602 ? ? 0.97 15 4 CD1 A LEU 331 ? ? H3 B U 602 ? ? 1.20 16 4 HB1 A ALA 148 ? ? HG11 A VAL 205 ? ? 1.29 17 4 NZ A LYS 300 ? ? "HO2'" B U 601 ? ? 1.45 18 4 HD11 A LEU 331 ? ? N3 B U 602 ? ? 1.57 19 4 OD1 A ASP 272 ? ? HZ2 A LYS 292 ? ? 1.58 20 4 NZ A LYS 300 ? ? "O2'" B U 601 ? ? 2.09 21 4 CD1 A LEU 331 ? ? N3 B U 602 ? ? 2.16 22 4 OD1 A ASP 231 ? ? O4 B U 607 ? ? 2.18 23 5 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 0.86 24 5 NZ A LYS 300 ? ? "HO2'" B U 601 ? ? 1.26 25 5 OD1 A ASP 231 ? ? O4 B U 607 ? ? 1.59 26 5 NZ A LYS 300 ? ? "O2'" B U 601 ? ? 2.03 27 6 HD11 A LEU 331 ? ? H3 B U 602 ? ? 1.08 28 6 HD12 A LEU 331 ? ? H3 B U 602 ? ? 1.16 29 6 CD1 A LEU 331 ? ? H3 B U 602 ? ? 1.22 30 6 HH A TYR 302 ? ? "H4'" B U 603 ? ? 1.33 31 6 CD1 A LEU 331 ? ? N3 B U 602 ? ? 2.19 32 7 OD1 A ASP 231 ? ? O4 B U 607 ? ? 1.84 33 8 OD1 A ASP 272 ? ? HZ2 A LYS 292 ? ? 1.51 34 8 OD1 A ASP 231 ? ? O4 B U 607 ? ? 1.68 35 9 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 1.12 36 9 OD2 A ASP 231 ? ? O4 B U 607 ? ? 2.07 37 10 HZ3 A LYS 300 ? ? "HO2'" B U 601 ? ? 0.95 38 10 NZ A LYS 300 ? ? "HO2'" B U 601 ? ? 1.07 39 10 HH A TYR 302 ? ? "H4'" B U 603 ? ? 1.18 40 10 HZ1 A LYS 300 ? ? "HO2'" B U 601 ? ? 1.33 41 10 HZ2 A LYS 300 ? ? "HO2'" B U 601 ? ? 1.34 42 10 OD1 A ASP 231 ? ? O4 B U 607 ? ? 1.59 43 10 HZ2 A LYS 300 ? ? O2 B U 601 ? ? 1.59 44 10 HZ3 A LYS 300 ? ? "O2'" B U 601 ? ? 1.60 45 10 NZ A LYS 300 ? ? "O2'" B U 601 ? ? 2.00 46 10 NZ A LYS 300 ? ? O2 B U 601 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B U 604 ? ? P B U 605 ? ? 1.684 1.607 0.077 0.012 Y 2 4 "O3'" B U 604 ? ? "C3'" B U 604 ? ? 1.516 1.427 0.089 0.012 N 3 4 "O3'" B U 604 ? ? P B U 605 ? ? 1.696 1.607 0.089 0.012 Y 4 5 "O3'" B U 604 ? ? "C3'" B U 604 ? ? 1.503 1.427 0.076 0.012 N 5 5 "O3'" B U 604 ? ? P B U 605 ? ? 1.683 1.607 0.076 0.012 Y 6 6 "O3'" B U 604 ? ? P B U 605 ? ? 1.702 1.607 0.095 0.012 Y 7 7 "O3'" B U 604 ? ? "C3'" B U 604 ? ? 1.509 1.427 0.082 0.012 N 8 7 "O3'" B U 604 ? ? P B U 605 ? ? 1.689 1.607 0.082 0.012 Y 9 8 "O3'" B U 604 ? ? P B U 605 ? ? 1.686 1.607 0.079 0.012 Y 10 9 "O3'" B U 604 ? ? P B U 605 ? ? 1.688 1.607 0.081 0.012 Y 11 10 "O3'" B U 604 ? ? "C3'" B U 604 ? ? 1.501 1.427 0.074 0.012 N 12 10 "O3'" B U 604 ? ? P B U 605 ? ? 1.680 1.607 0.073 0.012 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 149 ? ? -95.11 46.75 2 1 PRO A 229 ? ? -57.38 175.04 3 1 LEU A 235 ? ? 62.01 82.81 4 1 MET A 238 ? ? 67.16 -174.77 5 1 GLU A 240 ? ? -56.18 105.61 6 1 ASN A 241 ? ? -141.67 -56.32 7 1 SER A 243 ? ? -131.84 -88.33 8 1 VAL A 244 ? ? 61.73 -81.53 9 1 TYR A 245 ? ? -178.10 -61.52 10 1 SER A 251 ? ? 70.44 104.02 11 1 VAL A 253 ? ? -178.81 113.00 12 1 ASP A 256 ? ? -66.92 99.04 13 1 ALA A 258 ? ? 62.01 85.48 14 1 SER A 281 ? ? -50.61 -9.99 15 1 SER A 336 ? ? -119.41 -77.84 16 2 ARG A 149 ? ? -136.16 -150.21 17 2 LEU A 187 ? ? -111.96 70.47 18 2 ALA A 188 ? ? 107.73 151.32 19 2 PRO A 229 ? ? -57.44 175.17 20 2 ALA A 258 ? ? -142.82 54.46 21 2 HIS A 259 ? ? -80.32 30.98 22 2 SER A 281 ? ? -49.90 -10.33 23 2 SER A 336 ? ? -119.36 -78.77 24 3 ARG A 149 ? ? -144.11 -156.76 25 3 PRO A 229 ? ? -57.40 175.19 26 3 GLN A 233 ? ? 57.74 82.72 27 3 LEU A 235 ? ? 63.12 101.63 28 3 SER A 239 ? ? 62.09 -9.61 29 3 VAL A 254 ? ? 63.33 74.30 30 3 SER A 336 ? ? -119.36 -77.84 31 4 ARG A 149 ? ? -179.66 16.54 32 4 PRO A 229 ? ? -57.38 175.18 33 4 LEU A 235 ? ? 58.75 75.41 34 4 PRO A 236 ? ? -78.69 46.60 35 4 PRO A 247 ? ? -76.51 31.29 36 4 HIS A 259 ? ? -92.79 31.12 37 4 SER A 336 ? ? -119.40 -78.29 38 4 LYS A 340 ? ? -167.52 -56.18 39 5 PRO A 229 ? ? -57.31 174.90 40 5 HIS A 230 ? ? -104.29 -80.37 41 5 ASP A 231 ? ? 46.28 -98.13 42 5 TYR A 232 ? ? -81.13 -72.55 43 5 SER A 239 ? ? -120.41 -58.50 44 5 SER A 243 ? ? 69.71 161.42 45 5 VAL A 244 ? ? 67.37 99.14 46 5 SER A 251 ? ? 50.66 85.10 47 5 VAL A 254 ? ? 63.60 89.22 48 5 ALA A 258 ? ? -146.62 -69.93 49 5 HIS A 259 ? ? 89.65 30.43 50 5 SER A 336 ? ? -119.47 -79.03 51 5 ASN A 341 ? ? 70.74 100.70 52 6 PRO A 229 ? ? -57.39 175.26 53 6 VAL A 244 ? ? -159.79 -30.18 54 6 VAL A 249 ? ? 62.45 96.41 55 6 SER A 251 ? ? -124.42 -77.62 56 6 THR A 252 ? ? 67.83 -69.71 57 6 HIS A 259 ? ? -140.05 30.95 58 6 SER A 336 ? ? -119.37 -77.88 59 6 VAL A 337 ? ? -101.12 79.13 60 7 ARG A 149 ? ? -127.73 -152.26 61 7 PRO A 229 ? ? -57.52 175.12 62 7 GLU A 240 ? ? -85.79 -88.57 63 7 VAL A 250 ? ? 65.26 -77.21 64 7 HIS A 259 ? ? -93.83 31.02 65 7 SER A 336 ? ? -119.45 -77.68 66 8 ARG A 149 ? ? -91.75 57.47 67 8 LEU A 187 ? ? -112.42 71.39 68 8 ALA A 188 ? ? 107.13 151.10 69 8 PRO A 229 ? ? -57.43 175.18 70 8 TYR A 232 ? ? 65.71 106.54 71 8 TYR A 245 ? ? 62.59 83.10 72 8 VAL A 253 ? ? 65.05 95.39 73 8 PRO A 255 ? ? -84.34 -149.93 74 8 ALA A 258 ? ? -124.77 -71.16 75 8 HIS A 259 ? ? -140.56 31.07 76 8 SER A 336 ? ? -119.46 -78.18 77 8 VAL A 337 ? ? -168.36 -42.48 78 8 ALA A 339 ? ? -161.16 -164.94 79 9 PRO A 229 ? ? -57.21 174.82 80 9 GLN A 233 ? ? 62.01 93.75 81 9 SER A 243 ? ? 68.35 146.62 82 9 SER A 251 ? ? 71.54 170.55 83 9 ALA A 258 ? ? 70.32 105.69 84 9 HIS A 259 ? ? -98.21 31.02 85 9 SER A 281 ? ? -52.40 -7.73 86 9 SER A 336 ? ? -119.40 -75.90 87 9 VAL A 337 ? ? 79.04 120.55 88 10 PRO A 229 ? ? -57.16 174.78 89 10 MET A 238 ? ? -109.62 -60.48 90 10 PRO A 242 ? ? -49.91 104.52 91 10 VAL A 253 ? ? 62.64 72.40 92 10 SER A 281 ? ? -50.36 -9.62 93 10 SER A 336 ? ? -119.44 -77.59 # _pdbx_nmr_ensemble.entry_id 2YH1 _pdbx_nmr_ensemble.conformers_calculated_total_number 125 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY' # _pdbx_nmr_representative.entry_id 2YH1 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '90% WATER/10% D2O' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 295.0 atm 1.0 6.5 70 mM pH K 2 295.0 atm 1.0 6.5 70 mM pH K 3 295.0 atm 1.0 6.5 70 mM pH K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 1H 1 2 1 '15N HSQC (PRE)' 1 3 2 1H 1 4 2 '15N TROSY (HN-N RDC)' 1 5 3 '3D HNCO (N-CO RDC)' 1 # _pdbx_nmr_details.entry_id 2YH1 _pdbx_nmr_details.text 'THE STRUCTURE WAS DETERMINED USING A MULTI-STEP PROTOCOL AS DESCRIBED IN REMARK 3.' # _pdbx_nmr_refine.entry_id 2YH1 _pdbx_nmr_refine.method 'MODIFIED ARIA' _pdbx_nmr_refine.details ;STRUCTURE CALCULATION INCLUDED DISTANCE RESTRAINTS BASED ON PARAMAGNETIC RELAXATION ENHANCEMENT DATA FROM TEN INDEPENDENT CYSTEINE MUTANTS (N155C, A164C, A171C, L187C, A188C, T209C, D273C, S281C, A287C AND A318C) COVALENTLY MODIFIED BY 3-(2-IODOACETAMIDO)-2,2,5,5, TETRAMETHYL-1-PYRROLIDINYLOXY RADICAL (IODOACETAMIDO- PROXYL). THE STRUCTURE WAS DETERMINED USING A MULTI-STEP PROTOCOL. FIRST WITH REFINEMENT OF INDIVIDUAL STRUCTURED DOMAINS FOR RRM1 AND RRM2 OF U2AF65. THE INITIAL COORDINATES OF THE ISOLATED DOMAINS WERE BASED ON PDB ENTRY 2G4B BY SICKMIER ET AL. 2006 (SEE REMARK 1 REFERENCE). SECOND STEP WAS ADDITION AND RANDOMIZATION OF FLEXIBLE AND LINKER RESIDUES. THE THIRD STEP WAS MODEL CALCULATION USING RDC ORIENTATION, PRE-BASED DISTANCE, TALOS DIHEDRAL AND HYDROGEN BOND RESTRAINTS WITH THE RRM1 AND RRM2 DOMAINS RESTRAINED TO THEIR INITIAL STARTING STRUCTURES. INTER- MOLECULAR PROTEIN-RNA DISTANCE RESTRAINTS WERE BASED ON ATOMIC DETAILS FROM PDB ENTRY 2G4B AND ASSUMED AN EIGHT- URIDINE BINDING MODE FOR U2AF65 RRM1-RRM2. ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement CNS 1.2 'BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, READ,RICE,SIMONSON,WARREN' 1 'structure solution' Sparky ? ? 2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 145 ? A GLY 1 2 1 Y 1 A ALA 146 ? A ALA 2 3 1 Y 1 A MET 147 ? A MET 3 4 2 Y 1 A GLY 145 ? A GLY 1 5 2 Y 1 A ALA 146 ? A ALA 2 6 2 Y 1 A MET 147 ? A MET 3 7 3 Y 1 A GLY 145 ? A GLY 1 8 3 Y 1 A ALA 146 ? A ALA 2 9 3 Y 1 A MET 147 ? A MET 3 10 4 Y 1 A GLY 145 ? A GLY 1 11 4 Y 1 A ALA 146 ? A ALA 2 12 4 Y 1 A MET 147 ? A MET 3 13 5 Y 1 A GLY 145 ? A GLY 1 14 5 Y 1 A ALA 146 ? A ALA 2 15 5 Y 1 A MET 147 ? A MET 3 16 6 Y 1 A GLY 145 ? A GLY 1 17 6 Y 1 A ALA 146 ? A ALA 2 18 6 Y 1 A MET 147 ? A MET 3 19 7 Y 1 A GLY 145 ? A GLY 1 20 7 Y 1 A ALA 146 ? A ALA 2 21 7 Y 1 A MET 147 ? A MET 3 22 8 Y 1 A GLY 145 ? A GLY 1 23 8 Y 1 A ALA 146 ? A ALA 2 24 8 Y 1 A MET 147 ? A MET 3 25 9 Y 1 A GLY 145 ? A GLY 1 26 9 Y 1 A ALA 146 ? A ALA 2 27 9 Y 1 A MET 147 ? A MET 3 28 10 Y 1 A GLY 145 ? A GLY 1 29 10 Y 1 A ALA 146 ? A ALA 2 30 10 Y 1 A MET 147 ? A MET 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TYR N N N N 318 TYR CA C N S 319 TYR C C N N 320 TYR O O N N 321 TYR CB C N N 322 TYR CG C Y N 323 TYR CD1 C Y N 324 TYR CD2 C Y N 325 TYR CE1 C Y N 326 TYR CE2 C Y N 327 TYR CZ C Y N 328 TYR OH O N N 329 TYR OXT O N N 330 TYR H H N N 331 TYR H2 H N N 332 TYR HA H N N 333 TYR HB2 H N N 334 TYR HB3 H N N 335 TYR HD1 H N N 336 TYR HD2 H N N 337 TYR HE1 H N N 338 TYR HE2 H N N 339 TYR HH H N N 340 TYR HXT H N N 341 U OP3 O N N 342 U P P N N 343 U OP1 O N N 344 U OP2 O N N 345 U "O5'" O N N 346 U "C5'" C N N 347 U "C4'" C N R 348 U "O4'" O N N 349 U "C3'" C N S 350 U "O3'" O N N 351 U "C2'" C N R 352 U "O2'" O N N 353 U "C1'" C N R 354 U N1 N N N 355 U C2 C N N 356 U O2 O N N 357 U N3 N N N 358 U C4 C N N 359 U O4 O N N 360 U C5 C N N 361 U C6 C N N 362 U HOP3 H N N 363 U HOP2 H N N 364 U "H5'" H N N 365 U "H5''" H N N 366 U "H4'" H N N 367 U "H3'" H N N 368 U "HO3'" H N N 369 U "H2'" H N N 370 U "HO2'" H N N 371 U "H1'" H N N 372 U H3 H N N 373 U H5 H N N 374 U H6 H N N 375 VAL N N N N 376 VAL CA C N S 377 VAL C C N N 378 VAL O O N N 379 VAL CB C N N 380 VAL CG1 C N N 381 VAL CG2 C N N 382 VAL OXT O N N 383 VAL H H N N 384 VAL H2 H N N 385 VAL HA H N N 386 VAL HB H N N 387 VAL HG11 H N N 388 VAL HG12 H N N 389 VAL HG13 H N N 390 VAL HG21 H N N 391 VAL HG22 H N N 392 VAL HG23 H N N 393 VAL HXT H N N 394 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TYR N CA sing N N 304 TYR N H sing N N 305 TYR N H2 sing N N 306 TYR CA C sing N N 307 TYR CA CB sing N N 308 TYR CA HA sing N N 309 TYR C O doub N N 310 TYR C OXT sing N N 311 TYR CB CG sing N N 312 TYR CB HB2 sing N N 313 TYR CB HB3 sing N N 314 TYR CG CD1 doub Y N 315 TYR CG CD2 sing Y N 316 TYR CD1 CE1 sing Y N 317 TYR CD1 HD1 sing N N 318 TYR CD2 CE2 doub Y N 319 TYR CD2 HD2 sing N N 320 TYR CE1 CZ doub Y N 321 TYR CE1 HE1 sing N N 322 TYR CE2 CZ sing Y N 323 TYR CE2 HE2 sing N N 324 TYR CZ OH sing N N 325 TYR OH HH sing N N 326 TYR OXT HXT sing N N 327 U OP3 P sing N N 328 U OP3 HOP3 sing N N 329 U P OP1 doub N N 330 U P OP2 sing N N 331 U P "O5'" sing N N 332 U OP2 HOP2 sing N N 333 U "O5'" "C5'" sing N N 334 U "C5'" "C4'" sing N N 335 U "C5'" "H5'" sing N N 336 U "C5'" "H5''" sing N N 337 U "C4'" "O4'" sing N N 338 U "C4'" "C3'" sing N N 339 U "C4'" "H4'" sing N N 340 U "O4'" "C1'" sing N N 341 U "C3'" "O3'" sing N N 342 U "C3'" "C2'" sing N N 343 U "C3'" "H3'" sing N N 344 U "O3'" "HO3'" sing N N 345 U "C2'" "O2'" sing N N 346 U "C2'" "C1'" sing N N 347 U "C2'" "H2'" sing N N 348 U "O2'" "HO2'" sing N N 349 U "C1'" N1 sing N N 350 U "C1'" "H1'" sing N N 351 U N1 C2 sing N N 352 U N1 C6 sing N N 353 U C2 O2 doub N N 354 U C2 N3 sing N N 355 U N3 C4 sing N N 356 U N3 H3 sing N N 357 U C4 O4 doub N N 358 U C4 C5 sing N N 359 U C5 C6 doub N N 360 U C5 H5 sing N N 361 U C6 H6 sing N N 362 VAL N CA sing N N 363 VAL N H sing N N 364 VAL N H2 sing N N 365 VAL CA C sing N N 366 VAL CA CB sing N N 367 VAL CA HA sing N N 368 VAL C O doub N N 369 VAL C OXT sing N N 370 VAL CB CG1 sing N N 371 VAL CB CG2 sing N N 372 VAL CB HB sing N N 373 VAL CG1 HG11 sing N N 374 VAL CG1 HG12 sing N N 375 VAL CG1 HG13 sing N N 376 VAL CG2 HG21 sing N N 377 VAL CG2 HG22 sing N N 378 VAL CG2 HG23 sing N N 379 VAL OXT HXT sing N N 380 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 AVANCE Bruker 600 2 AVANCE Bruker 600 3 AVANCE Bruker 600 # _atom_sites.entry_id 2YH1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_