data_2YH9 # _entry.id 2YH9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YH9 pdb_00002yh9 10.2210/pdb2yh9/pdb PDBE EBI-48141 ? ? WWPDB D_1290048141 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-29 2 'Structure model' 1 1 2011-08-10 3 'Structure model' 1 2 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_entry_details 6 3 'Structure model' pdbx_modification_feature 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 3 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 6 3 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 7 3 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 8 3 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 9 3 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 10 3 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 11 3 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 12 3 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YH9 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-04-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zeth, K.' 1 'Albrecht, R.' 2 # _citation.id primary _citation.title 'Structural Basis of Outer Membrane Protein Biogenesis in Bacteria.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 27792 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21586578 _citation.pdbx_database_id_DOI 10.1074/JBC.M111.238931 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Albrecht, R.' 1 ? primary 'Zeth, K.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SMALL PROTEIN A' 9907.614 3 ? ? 'RESIDUES 34-113' 'LIPOPROTEIN SMPA/BAME' 2 water nat water 18.015 174 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BAME PROTEIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;QGNYLTANDVSKIRVG(MSE)TQQQVAYALGTPL(MSE)SDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNID NKPALSGNLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;QGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN LEHHHHHH ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 GLY n 1 3 ASN n 1 4 TYR n 1 5 LEU n 1 6 THR n 1 7 ALA n 1 8 ASN n 1 9 ASP n 1 10 VAL n 1 11 SER n 1 12 LYS n 1 13 ILE n 1 14 ARG n 1 15 VAL n 1 16 GLY n 1 17 MSE n 1 18 THR n 1 19 GLN n 1 20 GLN n 1 21 GLN n 1 22 VAL n 1 23 ALA n 1 24 TYR n 1 25 ALA n 1 26 LEU n 1 27 GLY n 1 28 THR n 1 29 PRO n 1 30 LEU n 1 31 MSE n 1 32 SER n 1 33 ASP n 1 34 PRO n 1 35 PHE n 1 36 GLY n 1 37 THR n 1 38 ASN n 1 39 THR n 1 40 TRP n 1 41 PHE n 1 42 TYR n 1 43 VAL n 1 44 PHE n 1 45 ARG n 1 46 GLN n 1 47 GLN n 1 48 PRO n 1 49 GLY n 1 50 HIS n 1 51 GLU n 1 52 GLY n 1 53 VAL n 1 54 THR n 1 55 GLN n 1 56 GLN n 1 57 THR n 1 58 LEU n 1 59 THR n 1 60 LEU n 1 61 THR n 1 62 PHE n 1 63 ASN n 1 64 SER n 1 65 SER n 1 66 GLY n 1 67 VAL n 1 68 LEU n 1 69 THR n 1 70 ASN n 1 71 ILE n 1 72 ASP n 1 73 ASN n 1 74 LYS n 1 75 PRO n 1 76 ALA n 1 77 LEU n 1 78 SER n 1 79 GLY n 1 80 ASN n 1 81 LEU n 1 82 GLU n 1 83 HIS n 1 84 HIS n 1 85 HIS n 1 86 HIS n 1 87 HIS n 1 88 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET24D _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 -4 ? ? ? A . n A 1 2 GLY 2 -3 ? ? ? A . n A 1 3 ASN 3 -2 ? ? ? A . n A 1 4 TYR 4 -1 ? ? ? A . n A 1 5 LEU 5 0 ? ? ? A . n A 1 6 THR 6 1 ? ? ? A . n A 1 7 ALA 7 2 ? ? ? A . n A 1 8 ASN 8 3 ? ? ? A . n A 1 9 ASP 9 4 ? ? ? A . n A 1 10 VAL 10 5 5 VAL VAL A . n A 1 11 SER 11 6 6 SER SER A . n A 1 12 LYS 12 7 7 LYS LYS A . n A 1 13 ILE 13 8 8 ILE ILE A . n A 1 14 ARG 14 9 9 ARG ARG A . n A 1 15 VAL 15 10 10 VAL VAL A . n A 1 16 GLY 16 11 11 GLY GLY A . n A 1 17 MSE 17 12 12 MSE MSE A . n A 1 18 THR 18 13 13 THR THR A . n A 1 19 GLN 19 14 14 GLN GLN A . n A 1 20 GLN 20 15 15 GLN GLN A . n A 1 21 GLN 21 16 16 GLN GLN A . n A 1 22 VAL 22 17 17 VAL VAL A . n A 1 23 ALA 23 18 18 ALA ALA A . n A 1 24 TYR 24 19 19 TYR TYR A . n A 1 25 ALA 25 20 20 ALA ALA A . n A 1 26 LEU 26 21 21 LEU LEU A . n A 1 27 GLY 27 22 22 GLY GLY A . n A 1 28 THR 28 23 23 THR THR A . n A 1 29 PRO 29 24 24 PRO PRO A . n A 1 30 LEU 30 25 25 LEU LEU A . n A 1 31 MSE 31 26 26 MSE MSE A . n A 1 32 SER 32 27 27 SER SER A . n A 1 33 ASP 33 28 28 ASP ASP A . n A 1 34 PRO 34 29 29 PRO PRO A . n A 1 35 PHE 35 30 30 PHE PHE A . n A 1 36 GLY 36 31 31 GLY GLY A . n A 1 37 THR 37 32 32 THR THR A . n A 1 38 ASN 38 33 33 ASN ASN A . n A 1 39 THR 39 34 34 THR THR A . n A 1 40 TRP 40 35 35 TRP TRP A . n A 1 41 PHE 41 36 36 PHE PHE A . n A 1 42 TYR 42 37 37 TYR TYR A . n A 1 43 VAL 43 38 38 VAL VAL A . n A 1 44 PHE 44 39 39 PHE PHE A . n A 1 45 ARG 45 40 40 ARG ARG A . n A 1 46 GLN 46 41 41 GLN GLN A . n A 1 47 GLN 47 42 42 GLN GLN A . n A 1 48 PRO 48 43 43 PRO PRO A . n A 1 49 GLY 49 44 44 GLY GLY A . n A 1 50 HIS 50 45 45 HIS HIS A . n A 1 51 GLU 51 46 46 GLU GLU A . n A 1 52 GLY 52 47 47 GLY GLY A . n A 1 53 VAL 53 48 48 VAL VAL A . n A 1 54 THR 54 49 49 THR THR A . n A 1 55 GLN 55 50 50 GLN GLN A . n A 1 56 GLN 56 51 51 GLN GLN A . n A 1 57 THR 57 52 52 THR THR A . n A 1 58 LEU 58 53 53 LEU LEU A . n A 1 59 THR 59 54 54 THR THR A . n A 1 60 LEU 60 55 55 LEU LEU A . n A 1 61 THR 61 56 56 THR THR A . n A 1 62 PHE 62 57 57 PHE PHE A . n A 1 63 ASN 63 58 58 ASN ASN A . n A 1 64 SER 64 59 59 SER SER A . n A 1 65 SER 65 60 60 SER SER A . n A 1 66 GLY 66 61 61 GLY GLY A . n A 1 67 VAL 67 62 62 VAL VAL A . n A 1 68 LEU 68 63 63 LEU LEU A . n A 1 69 THR 69 64 64 THR THR A . n A 1 70 ASN 70 65 65 ASN ASN A . n A 1 71 ILE 71 66 66 ILE ILE A . n A 1 72 ASP 72 67 67 ASP ASP A . n A 1 73 ASN 73 68 68 ASN ASN A . n A 1 74 LYS 74 69 69 LYS LYS A . n A 1 75 PRO 75 70 70 PRO PRO A . n A 1 76 ALA 76 71 ? ? ? A . n A 1 77 LEU 77 72 ? ? ? A . n A 1 78 SER 78 73 ? ? ? A . n A 1 79 GLY 79 74 ? ? ? A . n A 1 80 ASN 80 75 ? ? ? A . n A 1 81 LEU 81 76 ? ? ? A . n A 1 82 GLU 82 77 ? ? ? A . n A 1 83 HIS 83 78 ? ? ? A . n A 1 84 HIS 84 79 ? ? ? A . n A 1 85 HIS 85 80 ? ? ? A . n A 1 86 HIS 86 81 ? ? ? A . n A 1 87 HIS 87 82 ? ? ? A . n A 1 88 HIS 88 83 ? ? ? A . n B 1 1 GLN 1 -4 ? ? ? B . n B 1 2 GLY 2 -3 ? ? ? B . n B 1 3 ASN 3 -2 ? ? ? B . n B 1 4 TYR 4 -1 ? ? ? B . n B 1 5 LEU 5 0 ? ? ? B . n B 1 6 THR 6 1 ? ? ? B . n B 1 7 ALA 7 2 ? ? ? B . n B 1 8 ASN 8 3 ? ? ? B . n B 1 9 ASP 9 4 ? ? ? B . n B 1 10 VAL 10 5 5 VAL VAL B . n B 1 11 SER 11 6 6 SER SER B . n B 1 12 LYS 12 7 7 LYS LYS B . n B 1 13 ILE 13 8 8 ILE ILE B . n B 1 14 ARG 14 9 9 ARG ARG B . n B 1 15 VAL 15 10 10 VAL VAL B . n B 1 16 GLY 16 11 11 GLY GLY B . n B 1 17 MSE 17 12 12 MSE MSE B . n B 1 18 THR 18 13 13 THR THR B . n B 1 19 GLN 19 14 14 GLN GLN B . n B 1 20 GLN 20 15 15 GLN GLN B . n B 1 21 GLN 21 16 16 GLN GLN B . n B 1 22 VAL 22 17 17 VAL VAL B . n B 1 23 ALA 23 18 18 ALA ALA B . n B 1 24 TYR 24 19 19 TYR TYR B . n B 1 25 ALA 25 20 20 ALA ALA B . n B 1 26 LEU 26 21 21 LEU LEU B . n B 1 27 GLY 27 22 22 GLY GLY B . n B 1 28 THR 28 23 23 THR THR B . n B 1 29 PRO 29 24 24 PRO PRO B . n B 1 30 LEU 30 25 25 LEU LEU B . n B 1 31 MSE 31 26 26 MSE MSE B . n B 1 32 SER 32 27 27 SER SER B . n B 1 33 ASP 33 28 28 ASP ASP B . n B 1 34 PRO 34 29 29 PRO PRO B . n B 1 35 PHE 35 30 30 PHE PHE B . n B 1 36 GLY 36 31 31 GLY GLY B . n B 1 37 THR 37 32 32 THR THR B . n B 1 38 ASN 38 33 33 ASN ASN B . n B 1 39 THR 39 34 34 THR THR B . n B 1 40 TRP 40 35 35 TRP TRP B . n B 1 41 PHE 41 36 36 PHE PHE B . n B 1 42 TYR 42 37 37 TYR TYR B . n B 1 43 VAL 43 38 38 VAL VAL B . n B 1 44 PHE 44 39 39 PHE PHE B . n B 1 45 ARG 45 40 40 ARG ARG B . n B 1 46 GLN 46 41 41 GLN GLN B . n B 1 47 GLN 47 42 42 GLN GLN B . n B 1 48 PRO 48 43 43 PRO PRO B . n B 1 49 GLY 49 44 44 GLY GLY B . n B 1 50 HIS 50 45 45 HIS HIS B . n B 1 51 GLU 51 46 46 GLU GLU B . n B 1 52 GLY 52 47 47 GLY GLY B . n B 1 53 VAL 53 48 48 VAL VAL B . n B 1 54 THR 54 49 49 THR THR B . n B 1 55 GLN 55 50 50 GLN GLN B . n B 1 56 GLN 56 51 51 GLN GLN B . n B 1 57 THR 57 52 52 THR THR B . n B 1 58 LEU 58 53 53 LEU LEU B . n B 1 59 THR 59 54 54 THR THR B . n B 1 60 LEU 60 55 55 LEU LEU B . n B 1 61 THR 61 56 56 THR THR B . n B 1 62 PHE 62 57 57 PHE PHE B . n B 1 63 ASN 63 58 58 ASN ASN B . n B 1 64 SER 64 59 59 SER SER B . n B 1 65 SER 65 60 60 SER SER B . n B 1 66 GLY 66 61 61 GLY GLY B . n B 1 67 VAL 67 62 62 VAL VAL B . n B 1 68 LEU 68 63 63 LEU LEU B . n B 1 69 THR 69 64 64 THR THR B . n B 1 70 ASN 70 65 65 ASN ASN B . n B 1 71 ILE 71 66 66 ILE ILE B . n B 1 72 ASP 72 67 67 ASP ASP B . n B 1 73 ASN 73 68 68 ASN ASN B . n B 1 74 LYS 74 69 69 LYS LYS B . n B 1 75 PRO 75 70 70 PRO PRO B . n B 1 76 ALA 76 71 71 ALA ALA B . n B 1 77 LEU 77 72 72 LEU LEU B . n B 1 78 SER 78 73 ? ? ? B . n B 1 79 GLY 79 74 ? ? ? B . n B 1 80 ASN 80 75 ? ? ? B . n B 1 81 LEU 81 76 ? ? ? B . n B 1 82 GLU 82 77 ? ? ? B . n B 1 83 HIS 83 78 ? ? ? B . n B 1 84 HIS 84 79 ? ? ? B . n B 1 85 HIS 85 80 ? ? ? B . n B 1 86 HIS 86 81 ? ? ? B . n B 1 87 HIS 87 82 ? ? ? B . n B 1 88 HIS 88 83 ? ? ? B . n C 1 1 GLN 1 -4 ? ? ? C . n C 1 2 GLY 2 -3 ? ? ? C . n C 1 3 ASN 3 -2 ? ? ? C . n C 1 4 TYR 4 -1 ? ? ? C . n C 1 5 LEU 5 0 ? ? ? C . n C 1 6 THR 6 1 ? ? ? C . n C 1 7 ALA 7 2 ? ? ? C . n C 1 8 ASN 8 3 ? ? ? C . n C 1 9 ASP 9 4 ? ? ? C . n C 1 10 VAL 10 5 5 VAL VAL C . n C 1 11 SER 11 6 6 SER SER C . n C 1 12 LYS 12 7 7 LYS LYS C . n C 1 13 ILE 13 8 8 ILE ILE C . n C 1 14 ARG 14 9 9 ARG ARG C . n C 1 15 VAL 15 10 10 VAL VAL C . n C 1 16 GLY 16 11 11 GLY GLY C . n C 1 17 MSE 17 12 12 MSE MSE C . n C 1 18 THR 18 13 13 THR THR C . n C 1 19 GLN 19 14 14 GLN GLN C . n C 1 20 GLN 20 15 15 GLN GLN C . n C 1 21 GLN 21 16 16 GLN GLN C . n C 1 22 VAL 22 17 17 VAL VAL C . n C 1 23 ALA 23 18 18 ALA ALA C . n C 1 24 TYR 24 19 19 TYR TYR C . n C 1 25 ALA 25 20 20 ALA ALA C . n C 1 26 LEU 26 21 21 LEU LEU C . n C 1 27 GLY 27 22 22 GLY GLY C . n C 1 28 THR 28 23 23 THR THR C . n C 1 29 PRO 29 24 24 PRO PRO C . n C 1 30 LEU 30 25 25 LEU LEU C . n C 1 31 MSE 31 26 26 MSE MSE C . n C 1 32 SER 32 27 27 SER SER C . n C 1 33 ASP 33 28 28 ASP ASP C . n C 1 34 PRO 34 29 29 PRO PRO C . n C 1 35 PHE 35 30 30 PHE PHE C . n C 1 36 GLY 36 31 31 GLY GLY C . n C 1 37 THR 37 32 32 THR THR C . n C 1 38 ASN 38 33 33 ASN ASN C . n C 1 39 THR 39 34 34 THR THR C . n C 1 40 TRP 40 35 35 TRP TRP C . n C 1 41 PHE 41 36 36 PHE PHE C . n C 1 42 TYR 42 37 37 TYR TYR C . n C 1 43 VAL 43 38 38 VAL VAL C . n C 1 44 PHE 44 39 39 PHE PHE C . n C 1 45 ARG 45 40 40 ARG ARG C . n C 1 46 GLN 46 41 41 GLN GLN C . n C 1 47 GLN 47 42 42 GLN GLN C . n C 1 48 PRO 48 43 43 PRO PRO C . n C 1 49 GLY 49 44 44 GLY GLY C . n C 1 50 HIS 50 45 45 HIS HIS C . n C 1 51 GLU 51 46 46 GLU GLU C . n C 1 52 GLY 52 47 47 GLY GLY C . n C 1 53 VAL 53 48 48 VAL VAL C . n C 1 54 THR 54 49 49 THR THR C . n C 1 55 GLN 55 50 50 GLN GLN C . n C 1 56 GLN 56 51 51 GLN GLN C . n C 1 57 THR 57 52 52 THR THR C . n C 1 58 LEU 58 53 53 LEU LEU C . n C 1 59 THR 59 54 54 THR THR C . n C 1 60 LEU 60 55 55 LEU LEU C . n C 1 61 THR 61 56 56 THR THR C . n C 1 62 PHE 62 57 57 PHE PHE C . n C 1 63 ASN 63 58 58 ASN ASN C . n C 1 64 SER 64 59 59 SER SER C . n C 1 65 SER 65 60 60 SER SER C . n C 1 66 GLY 66 61 61 GLY GLY C . n C 1 67 VAL 67 62 62 VAL VAL C . n C 1 68 LEU 68 63 63 LEU LEU C . n C 1 69 THR 69 64 64 THR THR C . n C 1 70 ASN 70 65 65 ASN ASN C . n C 1 71 ILE 71 66 66 ILE ILE C . n C 1 72 ASP 72 67 67 ASP ASP C . n C 1 73 ASN 73 68 68 ASN ASN C . n C 1 74 LYS 74 69 69 LYS LYS C . n C 1 75 PRO 75 70 70 PRO PRO C . n C 1 76 ALA 76 71 71 ALA ALA C . n C 1 77 LEU 77 72 ? ? ? C . n C 1 78 SER 78 73 ? ? ? C . n C 1 79 GLY 79 74 ? ? ? C . n C 1 80 ASN 80 75 ? ? ? C . n C 1 81 LEU 81 76 ? ? ? C . n C 1 82 GLU 82 77 ? ? ? C . n C 1 83 HIS 83 78 ? ? ? C . n C 1 84 HIS 84 79 ? ? ? C . n C 1 85 HIS 85 80 ? ? ? C . n C 1 86 HIS 86 81 ? ? ? C . n C 1 87 HIS 87 82 ? ? ? C . n C 1 88 HIS 88 83 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 2001 2001 HOH HOH A . D 2 HOH 2 2002 2002 HOH HOH A . D 2 HOH 3 2003 2003 HOH HOH A . D 2 HOH 4 2004 2004 HOH HOH A . D 2 HOH 5 2005 2005 HOH HOH A . D 2 HOH 6 2006 2006 HOH HOH A . D 2 HOH 7 2007 2007 HOH HOH A . D 2 HOH 8 2008 2008 HOH HOH A . D 2 HOH 9 2009 2009 HOH HOH A . D 2 HOH 10 2010 2010 HOH HOH A . D 2 HOH 11 2011 2011 HOH HOH A . D 2 HOH 12 2012 2012 HOH HOH A . D 2 HOH 13 2013 2013 HOH HOH A . D 2 HOH 14 2014 2014 HOH HOH A . D 2 HOH 15 2015 2015 HOH HOH A . D 2 HOH 16 2016 2016 HOH HOH A . D 2 HOH 17 2017 2017 HOH HOH A . D 2 HOH 18 2018 2018 HOH HOH A . D 2 HOH 19 2019 2019 HOH HOH A . D 2 HOH 20 2020 2020 HOH HOH A . D 2 HOH 21 2021 2021 HOH HOH A . D 2 HOH 22 2022 2022 HOH HOH A . D 2 HOH 23 2023 2023 HOH HOH A . D 2 HOH 24 2024 2024 HOH HOH A . D 2 HOH 25 2025 2025 HOH HOH A . D 2 HOH 26 2026 2026 HOH HOH A . D 2 HOH 27 2027 2027 HOH HOH A . D 2 HOH 28 2028 2028 HOH HOH A . D 2 HOH 29 2029 2029 HOH HOH A . D 2 HOH 30 2030 2030 HOH HOH A . D 2 HOH 31 2031 2031 HOH HOH A . D 2 HOH 32 2032 2032 HOH HOH A . D 2 HOH 33 2033 2033 HOH HOH A . D 2 HOH 34 2034 2034 HOH HOH A . D 2 HOH 35 2035 2035 HOH HOH A . D 2 HOH 36 2036 2036 HOH HOH A . D 2 HOH 37 2037 2037 HOH HOH A . D 2 HOH 38 2038 2038 HOH HOH A . D 2 HOH 39 2039 2039 HOH HOH A . D 2 HOH 40 2040 2040 HOH HOH A . D 2 HOH 41 2041 2041 HOH HOH A . D 2 HOH 42 2042 2042 HOH HOH A . D 2 HOH 43 2043 2043 HOH HOH A . D 2 HOH 44 2044 2044 HOH HOH A . D 2 HOH 45 2045 2045 HOH HOH A . D 2 HOH 46 2046 2046 HOH HOH A . D 2 HOH 47 2047 2047 HOH HOH A . D 2 HOH 48 2048 2048 HOH HOH A . D 2 HOH 49 2049 2049 HOH HOH A . D 2 HOH 50 2050 2050 HOH HOH A . D 2 HOH 51 2051 2051 HOH HOH A . D 2 HOH 52 2052 2052 HOH HOH A . E 2 HOH 1 2001 2001 HOH HOH B . E 2 HOH 2 2002 2002 HOH HOH B . E 2 HOH 3 2003 2003 HOH HOH B . E 2 HOH 4 2004 2004 HOH HOH B . E 2 HOH 5 2005 2005 HOH HOH B . E 2 HOH 6 2006 2006 HOH HOH B . E 2 HOH 7 2007 2007 HOH HOH B . E 2 HOH 8 2008 2008 HOH HOH B . E 2 HOH 9 2009 2009 HOH HOH B . E 2 HOH 10 2010 2010 HOH HOH B . E 2 HOH 11 2011 2011 HOH HOH B . E 2 HOH 12 2012 2012 HOH HOH B . E 2 HOH 13 2013 2013 HOH HOH B . E 2 HOH 14 2014 2014 HOH HOH B . E 2 HOH 15 2015 2015 HOH HOH B . E 2 HOH 16 2016 2016 HOH HOH B . E 2 HOH 17 2017 2017 HOH HOH B . E 2 HOH 18 2018 2018 HOH HOH B . E 2 HOH 19 2019 2019 HOH HOH B . E 2 HOH 20 2020 2020 HOH HOH B . E 2 HOH 21 2021 2021 HOH HOH B . E 2 HOH 22 2022 2022 HOH HOH B . E 2 HOH 23 2023 2023 HOH HOH B . E 2 HOH 24 2024 2024 HOH HOH B . E 2 HOH 25 2025 2025 HOH HOH B . E 2 HOH 26 2026 2026 HOH HOH B . E 2 HOH 27 2027 2027 HOH HOH B . E 2 HOH 28 2028 2028 HOH HOH B . E 2 HOH 29 2029 2029 HOH HOH B . E 2 HOH 30 2030 2030 HOH HOH B . E 2 HOH 31 2031 2031 HOH HOH B . E 2 HOH 32 2032 2032 HOH HOH B . E 2 HOH 33 2033 2033 HOH HOH B . E 2 HOH 34 2034 2034 HOH HOH B . E 2 HOH 35 2035 2035 HOH HOH B . E 2 HOH 36 2036 2036 HOH HOH B . E 2 HOH 37 2037 2037 HOH HOH B . E 2 HOH 38 2038 2038 HOH HOH B . E 2 HOH 39 2039 2039 HOH HOH B . E 2 HOH 40 2040 2040 HOH HOH B . E 2 HOH 41 2041 2041 HOH HOH B . E 2 HOH 42 2042 2042 HOH HOH B . E 2 HOH 43 2043 2043 HOH HOH B . E 2 HOH 44 2044 2044 HOH HOH B . E 2 HOH 45 2045 2045 HOH HOH B . E 2 HOH 46 2046 2046 HOH HOH B . E 2 HOH 47 2047 2047 HOH HOH B . E 2 HOH 48 2048 2048 HOH HOH B . E 2 HOH 49 2049 2049 HOH HOH B . E 2 HOH 50 2050 2050 HOH HOH B . E 2 HOH 51 2051 2051 HOH HOH B . E 2 HOH 52 2052 2052 HOH HOH B . E 2 HOH 53 2053 2053 HOH HOH B . E 2 HOH 54 2054 2054 HOH HOH B . E 2 HOH 55 2055 2055 HOH HOH B . E 2 HOH 56 2056 2056 HOH HOH B . E 2 HOH 57 2057 2057 HOH HOH B . E 2 HOH 58 2058 2058 HOH HOH B . E 2 HOH 59 2059 2059 HOH HOH B . E 2 HOH 60 2060 2060 HOH HOH B . E 2 HOH 61 2061 2061 HOH HOH B . E 2 HOH 62 2062 2062 HOH HOH B . E 2 HOH 63 2063 2063 HOH HOH B . E 2 HOH 64 2064 2064 HOH HOH B . E 2 HOH 65 2065 2065 HOH HOH B . E 2 HOH 66 2066 2066 HOH HOH B . E 2 HOH 67 2067 2067 HOH HOH B . E 2 HOH 68 2068 2068 HOH HOH B . F 2 HOH 1 2001 2001 HOH HOH C . F 2 HOH 2 2002 2002 HOH HOH C . F 2 HOH 3 2003 2003 HOH HOH C . F 2 HOH 4 2004 2004 HOH HOH C . F 2 HOH 5 2005 2005 HOH HOH C . F 2 HOH 6 2006 2006 HOH HOH C . F 2 HOH 7 2007 2007 HOH HOH C . F 2 HOH 8 2008 2008 HOH HOH C . F 2 HOH 9 2009 2009 HOH HOH C . F 2 HOH 10 2010 2010 HOH HOH C . F 2 HOH 11 2011 2011 HOH HOH C . F 2 HOH 12 2012 2012 HOH HOH C . F 2 HOH 13 2013 2013 HOH HOH C . F 2 HOH 14 2014 2014 HOH HOH C . F 2 HOH 15 2015 2015 HOH HOH C . F 2 HOH 16 2016 2016 HOH HOH C . F 2 HOH 17 2017 2017 HOH HOH C . F 2 HOH 18 2018 2018 HOH HOH C . F 2 HOH 19 2019 2019 HOH HOH C . F 2 HOH 20 2020 2020 HOH HOH C . F 2 HOH 21 2021 2021 HOH HOH C . F 2 HOH 22 2022 2022 HOH HOH C . F 2 HOH 23 2023 2023 HOH HOH C . F 2 HOH 24 2024 2024 HOH HOH C . F 2 HOH 25 2025 2025 HOH HOH C . F 2 HOH 26 2026 2026 HOH HOH C . F 2 HOH 27 2027 2027 HOH HOH C . F 2 HOH 28 2028 2028 HOH HOH C . F 2 HOH 29 2029 2029 HOH HOH C . F 2 HOH 30 2030 2030 HOH HOH C . F 2 HOH 31 2031 2031 HOH HOH C . F 2 HOH 32 2032 2032 HOH HOH C . F 2 HOH 33 2033 2033 HOH HOH C . F 2 HOH 34 2034 2034 HOH HOH C . F 2 HOH 35 2035 2035 HOH HOH C . F 2 HOH 36 2036 2036 HOH HOH C . F 2 HOH 37 2037 2037 HOH HOH C . F 2 HOH 38 2038 2038 HOH HOH C . F 2 HOH 39 2039 2039 HOH HOH C . F 2 HOH 40 2040 2040 HOH HOH C . F 2 HOH 41 2041 2041 HOH HOH C . F 2 HOH 42 2042 2042 HOH HOH C . F 2 HOH 43 2043 2043 HOH HOH C . F 2 HOH 44 2044 2044 HOH HOH C . F 2 HOH 45 2045 2045 HOH HOH C . F 2 HOH 46 2046 2046 HOH HOH C . F 2 HOH 47 2047 2047 HOH HOH C . F 2 HOH 48 2048 2048 HOH HOH C . F 2 HOH 49 2049 2049 HOH HOH C . F 2 HOH 50 2050 2050 HOH HOH C . F 2 HOH 51 2051 2051 HOH HOH C . F 2 HOH 52 2052 2052 HOH HOH C . F 2 HOH 53 2053 2053 HOH HOH C . F 2 HOH 54 2054 2054 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0102 ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 SHARP phasing . ? 4 DM phasing . ? 5 BUCCANEER phasing . ? 6 # _cell.entry_id 2YH9 _cell.length_a 69.660 _cell.length_b 96.520 _cell.length_c 50.490 _cell.angle_alpha 90.00 _cell.angle_beta 134.06 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YH9 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 2YH9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_percent_sol 40.62 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '30% PEG 4000, 10% I-PROH, 0.1 M HEPES PH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 0.979 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YH9 _reflns.observed_criterion_sigma_I 2.8 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.80 _reflns.number_obs 21093 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.88 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.47 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.80 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YH9 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 21093 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.29 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.18366 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18121 _refine.ls_R_factor_R_free 0.22859 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1111 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 21.797 _refine.aniso_B[1][1] 1.65 _refine.aniso_B[2][2] -0.61 _refine.aniso_B[3][3] -0.07 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.69 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.190 _refine.pdbx_overall_ESU_R_Free 0.121 _refine.overall_SU_ML 0.093 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.828 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1563 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 1737 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 22.29 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.025 0.022 ? 1613 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.831 1.933 ? 2201 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.511 5.000 ? 202 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.539 24.795 ? 73 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.555 15.000 ? 255 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.860 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.123 0.200 ? 253 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.021 ? 1231 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.548 1.500 ? 1002 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.540 2.000 ? 1637 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.709 3.000 ? 611 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 5.501 4.500 ? 562 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.502 3.000 ? 1613 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 203 0.11 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 203 0.18 0.05 'tight positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 3 C 203 0.12 0.05 'tight positional' 1 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 193 0.13 5.00 'loose positional' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 193 0.21 5.00 'loose positional' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 3 C 193 0.14 5.00 'loose positional' 1 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 203 0.31 0.50 'tight thermal' 1 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 203 0.29 0.50 'tight thermal' 1 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? 3 C 203 0.32 0.50 'tight thermal' 1 9 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 193 0.31 10.00 'loose thermal' 1 10 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 193 0.34 10.00 'loose thermal' 1 11 'X-RAY DIFFRACTION' ? ? ? ? ? ? 3 C 193 0.29 10.00 'loose thermal' 1 12 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.846 _refine_ls_shell.number_reflns_R_work 1549 _refine_ls_shell.R_factor_R_work 0.263 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.317 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 3 C 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A VAL 15 . A SER 65 . A VAL 10 A SER 60 3 ? 1 2 1 B VAL 15 . B SER 65 . B VAL 10 B SER 60 3 ? 1 3 1 C VAL 15 . C SER 65 . C VAL 10 C SER 60 3 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _database_PDB_matrix.entry_id 2YH9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YH9 _struct.title 'Crystal structure of the dimeric BamE from E. coli' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YH9 _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'LIPOPROTEIN, 3D DOMAIN SWAP, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SMPA_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P0A937 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YH9 A 1 ? 80 ? P0A937 34 ? 113 ? -4 75 2 1 2YH9 B 1 ? 80 ? P0A937 34 ? 113 ? -4 75 3 1 2YH9 C 1 ? 80 ? P0A937 34 ? 113 ? -4 75 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YH9 LEU A 81 ? UNP P0A937 ? ? 'expression tag' 76 1 1 2YH9 GLU A 82 ? UNP P0A937 ? ? 'expression tag' 77 2 1 2YH9 HIS A 83 ? UNP P0A937 ? ? 'expression tag' 78 3 1 2YH9 HIS A 84 ? UNP P0A937 ? ? 'expression tag' 79 4 1 2YH9 HIS A 85 ? UNP P0A937 ? ? 'expression tag' 80 5 1 2YH9 HIS A 86 ? UNP P0A937 ? ? 'expression tag' 81 6 1 2YH9 HIS A 87 ? UNP P0A937 ? ? 'expression tag' 82 7 1 2YH9 HIS A 88 ? UNP P0A937 ? ? 'expression tag' 83 8 2 2YH9 LEU B 81 ? UNP P0A937 ? ? 'expression tag' 76 9 2 2YH9 GLU B 82 ? UNP P0A937 ? ? 'expression tag' 77 10 2 2YH9 HIS B 83 ? UNP P0A937 ? ? 'expression tag' 78 11 2 2YH9 HIS B 84 ? UNP P0A937 ? ? 'expression tag' 79 12 2 2YH9 HIS B 85 ? UNP P0A937 ? ? 'expression tag' 80 13 2 2YH9 HIS B 86 ? UNP P0A937 ? ? 'expression tag' 81 14 2 2YH9 HIS B 87 ? UNP P0A937 ? ? 'expression tag' 82 15 2 2YH9 HIS B 88 ? UNP P0A937 ? ? 'expression tag' 83 16 3 2YH9 LEU C 81 ? UNP P0A937 ? ? 'expression tag' 76 17 3 2YH9 GLU C 82 ? UNP P0A937 ? ? 'expression tag' 77 18 3 2YH9 HIS C 83 ? UNP P0A937 ? ? 'expression tag' 78 19 3 2YH9 HIS C 84 ? UNP P0A937 ? ? 'expression tag' 79 20 3 2YH9 HIS C 85 ? UNP P0A937 ? ? 'expression tag' 80 21 3 2YH9 HIS C 86 ? UNP P0A937 ? ? 'expression tag' 81 22 3 2YH9 HIS C 87 ? UNP P0A937 ? ? 'expression tag' 82 23 3 2YH9 HIS C 88 ? UNP P0A937 ? ? 'expression tag' 83 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 19110 ? 1 MORE -116.1 ? 1 'SSA (A^2)' 18100 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 18 ? GLY A 27 ? THR A 13 GLY A 22 1 ? 10 HELX_P HELX_P2 2 THR B 18 ? GLY B 27 ? THR B 13 GLY B 22 1 ? 10 HELX_P HELX_P3 3 THR C 18 ? GLY C 27 ? THR C 13 GLY C 22 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 16 C ? ? ? 1_555 A MSE 17 N ? ? A GLY 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale2 covale both ? A MSE 17 C ? ? ? 1_555 A THR 18 N ? ? A MSE 12 A THR 13 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A LEU 30 C ? ? ? 1_555 A MSE 31 N ? ? A LEU 25 A MSE 26 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale4 covale both ? A MSE 31 C ? ? ? 1_555 A SER 32 N ? ? A MSE 26 A SER 27 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale5 covale both ? B GLY 16 C ? ? ? 1_555 B MSE 17 N ? ? B GLY 11 B MSE 12 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? B MSE 17 C ? ? ? 1_555 B THR 18 N ? ? B MSE 12 B THR 13 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale7 covale both ? B LEU 30 C ? ? ? 1_555 B MSE 31 N ? ? B LEU 25 B MSE 26 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale8 covale both ? B MSE 31 C ? ? ? 1_555 B SER 32 N ? ? B MSE 26 B SER 27 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale9 covale both ? C GLY 16 C ? ? ? 1_555 C MSE 17 N ? ? C GLY 11 C MSE 12 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale10 covale both ? C MSE 17 C ? ? ? 1_555 C THR 18 N ? ? C MSE 12 C THR 13 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? C LEU 30 C ? ? ? 1_555 C MSE 31 N ? ? C LEU 25 C MSE 26 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale12 covale both ? C MSE 31 C ? ? ? 1_555 C SER 32 N ? ? C MSE 26 C SER 27 1_555 ? ? ? ? ? ? ? 1.324 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 17 ? . . . . MSE A 12 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 31 ? . . . . MSE A 26 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE B 17 ? . . . . MSE B 12 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE B 31 ? . . . . MSE B 26 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE C 17 ? . . . . MSE C 12 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE C 31 ? . . . . MSE C 26 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 74 A . ? LYS 69 A PRO 75 A ? PRO 70 A 1 -8.59 2 LYS 74 B . ? LYS 69 B PRO 75 B ? PRO 70 B 1 -1.52 3 LYS 74 C . ? LYS 69 C PRO 75 C ? PRO 70 C 1 2.36 4 PRO 75 C . ? PRO 70 C ALA 76 C ? ALA 71 C 1 -7.42 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? BA ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 MSE A 31 ? SER A 32 ? MSE A 26 SER A 27 AA 2 THR C 39 ? VAL C 43 ? THR C 34 VAL C 38 AA 3 THR C 57 ? PHE C 62 ? THR C 52 PHE C 57 AA 4 LEU C 68 ? ASP C 72 ? LEU C 63 ASP C 67 AB 1 LEU A 68 ? LYS A 74 ? LEU A 63 LYS A 69 AB 2 THR A 57 ? PHE A 62 ? THR A 52 PHE A 57 AB 3 THR A 39 ? VAL A 43 ? THR A 34 VAL A 38 AB 4 MSE C 31 ? SER C 32 ? MSE C 26 SER C 27 BA 1 THR B 39 ? VAL B 43 ? THR B 34 VAL B 38 BA 2 THR B 57 ? PHE B 62 ? THR B 52 PHE B 57 BA 3 LEU B 68 ? LYS B 74 ? LEU B 63 LYS B 69 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N MSE A 31 ? N MSE A 26 O PHE C 41 ? O PHE C 36 AA 2 3 N TYR C 42 ? N TYR C 37 O LEU C 58 ? O LEU C 53 AA 3 4 O THR C 61 ? O THR C 56 N THR C 69 ? N THR C 64 AB 1 2 N LYS A 74 ? N LYS A 69 O THR A 57 ? O THR A 52 AB 2 3 N LEU A 60 ? N LEU A 55 O TRP A 40 ? O TRP A 35 AB 3 4 N PHE A 41 ? N PHE A 36 O MSE C 31 ? O MSE C 26 BA 1 2 N TYR B 42 ? N TYR B 37 O LEU B 58 ? O LEU B 53 BA 2 3 O THR B 61 ? O THR B 56 N THR B 69 ? N THR B 64 # _pdbx_entry_details.entry_id 2YH9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 2026 ? ? O B HOH 2027 ? ? 1.66 2 1 OD1 B ASN 33 ? ? O B HOH 2026 ? ? 2.03 3 1 OE1 A GLN 51 ? ? O A HOH 2033 ? ? 2.14 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 40 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 40 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 40 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.44 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.86 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 6 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 173.32 _pdbx_validate_torsion.psi 160.00 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 17 A MSE 12 ? MET SELENOMETHIONINE 2 A MSE 31 A MSE 26 ? MET SELENOMETHIONINE 3 B MSE 17 B MSE 12 ? MET SELENOMETHIONINE 4 B MSE 31 B MSE 26 ? MET SELENOMETHIONINE 5 C MSE 17 C MSE 12 ? MET SELENOMETHIONINE 6 C MSE 31 C MSE 26 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 2024 ? E HOH . 2 1 C HOH 2019 ? F HOH . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -18.4530 42.8400 3.8460 0.0189 0.1653 0.0564 -0.0363 -0.0089 -0.0308 2.0115 1.1589 1.8960 -1.2436 -1.6774 0.5983 -0.0894 0.3585 -0.1711 0.0323 -0.1156 0.0449 0.1056 -0.4179 0.2050 'X-RAY DIFFRACTION' 2 ? refined 3.0940 34.4940 8.4380 0.0636 0.0713 0.0770 0.0315 0.0047 0.0389 0.8083 0.6069 1.6628 0.4706 -0.9505 -0.6875 -0.0971 -0.0800 -0.1559 -0.0862 -0.0715 -0.0805 0.2323 0.1390 0.1686 'X-RAY DIFFRACTION' 3 ? refined 5.5710 26.5920 6.6940 0.1460 0.0260 0.1886 0.0545 0.0714 0.0202 3.3036 11.3828 16.6572 1.7525 -6.9023 -8.4862 -0.2011 -0.0746 -0.0021 -0.4810 0.0454 -0.3736 0.6106 0.1242 0.1557 'X-RAY DIFFRACTION' 4 ? refined -7.0140 63.1040 -18.9520 0.5581 0.2286 0.0670 -0.2664 0.1174 -0.0385 1.2885 6.3591 21.5786 1.0784 -4.3009 2.4684 -0.4575 0.5235 -0.0592 -1.7719 0.7043 -0.4630 0.1490 -1.4969 -0.2468 'X-RAY DIFFRACTION' 5 ? refined -1.8010 57.8290 5.4860 0.0486 0.0425 0.0530 0.0069 -0.0288 -0.0010 0.2456 0.4367 1.4973 0.0414 -0.0983 -0.5690 0.0147 -0.0096 0.0420 0.0609 -0.0175 0.0408 -0.1218 -0.0305 0.0029 'X-RAY DIFFRACTION' 6 ? refined -3.6840 57.2330 19.4430 0.1619 0.1845 0.0559 0.0402 0.0375 0.0130 0.2308 22.7676 1.0636 -0.2999 -0.4168 -1.8675 -0.0427 -0.0844 -0.0993 0.9078 -0.1281 0.1735 -0.0794 0.1132 0.1708 'X-RAY DIFFRACTION' 7 ? refined 7.7500 30.0050 18.0320 0.0917 0.0675 0.2055 0.0148 -0.0141 0.0461 32.7015 9.7256 26.9508 0.0000 -7.0482 0.0000 0.9388 0.1595 0.4349 0.5899 -0.1237 -0.7403 -0.6887 0.4029 -0.8152 'X-RAY DIFFRACTION' 8 ? refined -1.8290 37.2770 14.4620 0.0668 0.0832 0.1452 -0.0231 0.0346 -0.0133 1.6761 3.0099 0.1187 -2.0913 0.3154 -0.5453 -0.0897 0.0347 -0.1655 0.0520 0.0383 -0.0038 0.0102 -0.0231 0.0513 'X-RAY DIFFRACTION' 9 ? refined -15.1940 51.1540 4.9040 0.0491 0.1215 0.0703 0.0104 -0.0160 0.0168 1.0054 1.1162 2.0798 0.9284 -1.3657 -1.0656 -0.0007 0.1060 0.0336 0.0527 -0.0102 0.0580 -0.0096 -0.2458 0.0109 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 7 ? ? A 28 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 29 ? ? A 64 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 65 ? ? A 70 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 B 4 ? ? B 11 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 12 ? ? B 64 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 65 ? ? B 72 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 C 5 ? ? C 11 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 C 12 ? ? C 32 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 C 33 ? ? C 71 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN -4 ? A GLN 1 2 1 Y 1 A GLY -3 ? A GLY 2 3 1 Y 1 A ASN -2 ? A ASN 3 4 1 Y 1 A TYR -1 ? A TYR 4 5 1 Y 1 A LEU 0 ? A LEU 5 6 1 Y 1 A THR 1 ? A THR 6 7 1 Y 1 A ALA 2 ? A ALA 7 8 1 Y 1 A ASN 3 ? A ASN 8 9 1 Y 1 A ASP 4 ? A ASP 9 10 1 Y 1 A ALA 71 ? A ALA 76 11 1 Y 1 A LEU 72 ? A LEU 77 12 1 Y 1 A SER 73 ? A SER 78 13 1 Y 1 A GLY 74 ? A GLY 79 14 1 Y 1 A ASN 75 ? A ASN 80 15 1 Y 1 A LEU 76 ? A LEU 81 16 1 Y 1 A GLU 77 ? A GLU 82 17 1 Y 1 A HIS 78 ? A HIS 83 18 1 Y 1 A HIS 79 ? A HIS 84 19 1 Y 1 A HIS 80 ? A HIS 85 20 1 Y 1 A HIS 81 ? A HIS 86 21 1 Y 1 A HIS 82 ? A HIS 87 22 1 Y 1 A HIS 83 ? A HIS 88 23 1 Y 1 B GLN -4 ? B GLN 1 24 1 Y 1 B GLY -3 ? B GLY 2 25 1 Y 1 B ASN -2 ? B ASN 3 26 1 Y 1 B TYR -1 ? B TYR 4 27 1 Y 1 B LEU 0 ? B LEU 5 28 1 Y 1 B THR 1 ? B THR 6 29 1 Y 1 B ALA 2 ? B ALA 7 30 1 Y 1 B ASN 3 ? B ASN 8 31 1 Y 1 B ASP 4 ? B ASP 9 32 1 Y 1 B SER 73 ? B SER 78 33 1 Y 1 B GLY 74 ? B GLY 79 34 1 Y 1 B ASN 75 ? B ASN 80 35 1 Y 1 B LEU 76 ? B LEU 81 36 1 Y 1 B GLU 77 ? B GLU 82 37 1 Y 1 B HIS 78 ? B HIS 83 38 1 Y 1 B HIS 79 ? B HIS 84 39 1 Y 1 B HIS 80 ? B HIS 85 40 1 Y 1 B HIS 81 ? B HIS 86 41 1 Y 1 B HIS 82 ? B HIS 87 42 1 Y 1 B HIS 83 ? B HIS 88 43 1 Y 1 C GLN -4 ? C GLN 1 44 1 Y 1 C GLY -3 ? C GLY 2 45 1 Y 1 C ASN -2 ? C ASN 3 46 1 Y 1 C TYR -1 ? C TYR 4 47 1 Y 1 C LEU 0 ? C LEU 5 48 1 Y 1 C THR 1 ? C THR 6 49 1 Y 1 C ALA 2 ? C ALA 7 50 1 Y 1 C ASN 3 ? C ASN 8 51 1 Y 1 C ASP 4 ? C ASP 9 52 1 Y 1 C LEU 72 ? C LEU 77 53 1 Y 1 C SER 73 ? C SER 78 54 1 Y 1 C GLY 74 ? C GLY 79 55 1 Y 1 C ASN 75 ? C ASN 80 56 1 Y 1 C LEU 76 ? C LEU 81 57 1 Y 1 C GLU 77 ? C GLU 82 58 1 Y 1 C HIS 78 ? C HIS 83 59 1 Y 1 C HIS 79 ? C HIS 84 60 1 Y 1 C HIS 80 ? C HIS 85 61 1 Y 1 C HIS 81 ? C HIS 86 62 1 Y 1 C HIS 82 ? C HIS 87 63 1 Y 1 C HIS 83 ? C HIS 88 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MSE N N N N 216 MSE CA C N S 217 MSE C C N N 218 MSE O O N N 219 MSE OXT O N N 220 MSE CB C N N 221 MSE CG C N N 222 MSE SE SE N N 223 MSE CE C N N 224 MSE H H N N 225 MSE H2 H N N 226 MSE HA H N N 227 MSE HXT H N N 228 MSE HB2 H N N 229 MSE HB3 H N N 230 MSE HG2 H N N 231 MSE HG3 H N N 232 MSE HE1 H N N 233 MSE HE2 H N N 234 MSE HE3 H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MSE N CA sing N N 205 MSE N H sing N N 206 MSE N H2 sing N N 207 MSE CA C sing N N 208 MSE CA CB sing N N 209 MSE CA HA sing N N 210 MSE C O doub N N 211 MSE C OXT sing N N 212 MSE OXT HXT sing N N 213 MSE CB CG sing N N 214 MSE CB HB2 sing N N 215 MSE CB HB3 sing N N 216 MSE CG SE sing N N 217 MSE CG HG2 sing N N 218 MSE CG HG3 sing N N 219 MSE SE CE sing N N 220 MSE CE HE1 sing N N 221 MSE CE HE2 sing N N 222 MSE CE HE3 sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 2YH9 _atom_sites.fract_transf_matrix[1][1] 0.014355 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.013892 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010361 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027561 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_