data_2YIE # _entry.id 2YIE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YIE pdb_00002yie 10.2210/pdb2yie/pdb PDBE EBI-48274 ? ? WWPDB D_1290048274 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2YIF _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF A F. NUCLEATUM FMN RIBOSWITCH - FREE STATE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YIE _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-05-12 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vicens, Q.' 1 'Mondragon, E.' 2 'Batey, R.T.' 3 # _citation.id primary _citation.title 'Molecular Sensing by the Aptamer Domain of the Fmn Riboswitch: A General Model for Ligand Binding by Conformational Selection' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 39 _citation.page_first 8586 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21745821 _citation.pdbx_database_id_DOI 10.1093/NAR/GKR565 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vicens, Q.' 1 ? primary 'Mondragon, E.' 2 ? primary 'Batey, R.T.' 3 ? # _cell.entry_id 2YIE _cell.length_a 73.679 _cell.length_b 73.679 _cell.length_c 139.251 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YIE _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'FMN RIBOSWITCH' 17575.324 1 ? YES 'APTAMER DOMAIN, RESIDUES 2495-2544' 'APTAMER DOMAIN BOUND TO FLAVIN MONONUCLEOTIDE' 2 polymer syn 'FMN RIBOSWITCH' 18661.000 1 ? YES 'APTAMER DOMAIN, RESIDUES 2550-2601' 'APTAMER DOMAIN BOUND TO FLAVIN MONONUCLEOTIDE' 3 non-polymer syn 'MAGNESIUM ION' 24.305 14 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 5 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 1 ? ? ? ? 6 water nat water 18.015 29 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes '(GTP)GAUCUUCGGGGCAGGGUGAAAUUCCCGACCGGUGGUAUAGUCCACGAAUCCAU' GGAUCUUCGGGGCAGGGUGAAAUUCCCGACCGGUGGUAUAGUCCACGAAUCCAU X ? 2 polyribonucleotide no yes '(GTP)GAUUGAUUUGGUGAAAUUCCAAAACCGACAGUAGAGUCUGGAUGAGAGAAGAUUCG' GGAUUGAUUUGGUGAAAUUCCAAAACCGACAGUAGAGUCUGGAUGAGAGAAGAUUCG Z ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 A n 1 4 U n 1 5 C n 1 6 U n 1 7 U n 1 8 C n 1 9 G n 1 10 G n 1 11 G n 1 12 G n 1 13 C n 1 14 A n 1 15 G n 1 16 G n 1 17 G n 1 18 U n 1 19 G n 1 20 A n 1 21 A n 1 22 A n 1 23 U n 1 24 U n 1 25 C n 1 26 C n 1 27 C n 1 28 G n 1 29 A n 1 30 C n 1 31 C n 1 32 G n 1 33 G n 1 34 U n 1 35 G n 1 36 G n 1 37 U n 1 38 A n 1 39 U n 1 40 A n 1 41 G n 1 42 U n 1 43 C n 1 44 C n 1 45 A n 1 46 C n 1 47 G n 1 48 A n 1 49 A n 1 50 U n 1 51 C n 1 52 C n 1 53 A n 1 54 U n 2 1 GTP n 2 2 G n 2 3 A n 2 4 U n 2 5 U n 2 6 G n 2 7 A n 2 8 U n 2 9 U n 2 10 U n 2 11 G n 2 12 G n 2 13 U n 2 14 G n 2 15 A n 2 16 A n 2 17 A n 2 18 U n 2 19 U n 2 20 C n 2 21 C n 2 22 A n 2 23 A n 2 24 A n 2 25 A n 2 26 C n 2 27 C n 2 28 G n 2 29 A n 2 30 C n 2 31 A n 2 32 G n 2 33 U n 2 34 A n 2 35 G n 2 36 A n 2 37 G n 2 38 U n 2 39 C n 2 40 U n 2 41 G n 2 42 G n 2 43 A n 2 44 U n 2 45 G n 2 46 A n 2 47 G n 2 48 A n 2 49 G n 2 50 A n 2 51 A n 2 52 G n 2 53 A n 2 54 U n 2 55 U n 2 56 C n 2 57 G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'FUSOBACTERIUM NUCLEATUM SUBSP. NUCLEATUM' ? 190304 ? 2 1 sample ? ? 'FUSOBACTERIUM NUCLEATUM SUBSP. NUCLEATUM' ? 190304 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 GB AE009951 1 ? ? 20095250 ? 2 GB AE009951 2 ? ? 20095250 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YIE X 3 ? 52 ? 20095250 2495 ? 2544 ? 3 52 2 2 2YIE Z 2 ? 53 ? 20095250 2550 ? 2601 ? 58 109 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YIE GTP X 1 ? GB 20095250 ? ? 'expression tag' 1 1 1 2YIE G X 2 ? GB 20095250 ? ? 'expression tag' 2 2 1 2YIE U X 50 ? GB 20095250 A 2542 'engineered mutation' 50 3 1 2YIE C X 51 ? GB 20095250 G 2543 'engineered mutation' 51 4 1 2YIE C X 52 ? GB 20095250 U 2544 'engineered mutation' 52 5 1 2YIE A X 53 ? GB 20095250 ? ? 'expression tag' 53 6 1 2YIE U X 54 ? GB 20095250 ? ? 'expression tag' 54 7 2 2YIE GTP Z 1 ? GB 20095250 ? ? 'expression tag' 57 8 2 2YIE G Z 2 ? GB 20095250 C 2550 'engineered mutation' 58 9 2 2YIE A Z 3 ? GB 20095250 U 2551 'engineered mutation' 59 10 2 2YIE U Z 54 ? GB 20095250 ? ? 'expression tag' 110 11 2 2YIE U Z 55 ? GB 20095250 ? ? 'expression tag' 111 12 2 2YIE C Z 56 ? GB 20095250 ? ? 'expression tag' 112 13 2 2YIE G Z 57 ? GB 20095250 ? ? 'expression tag' 113 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 2YIE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.5 _exptl_crystal.density_percent_sol 64 _exptl_crystal.description 'DATA WAS COLLECTED BY ANNIE HEROUX AS PART OF THE MACROMOLECULAR CRYSTALLOGRAPHY RESEARCH RESOURCE AT BROOKHAVEN NSLS' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'RNA WAS CRYSTALLIZED FROM 15% PEG-MONOMETHYL 550 ETHER, 0.1 M MGCL2, 0.05 M NA-HEPES PH 7.0, 1 MM FMN' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2009-08-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength 0.9795 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YIE _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.00 _reflns.d_resolution_high 2.95 _reflns.number_obs 17834 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.70 _reflns.B_iso_Wilson_estimate 80.36 _reflns.pdbx_redundancy 4.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.95 _reflns_shell.d_res_low 3.06 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.48 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.40 _reflns_shell.pdbx_redundancy 3.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YIE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 9559 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.292 _refine.ls_d_res_high 2.941 _refine.ls_percent_reflns_obs 98.03 _refine.ls_R_factor_obs 0.2056 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2041 _refine.ls_R_factor_R_free 0.2314 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.3 _refine.ls_number_reflns_R_free 507 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 96.2 _refine.aniso_B[1][1] -6.6226 _refine.aniso_B[2][2] -6.6226 _refine.aniso_B[3][3] 13.2451 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.247 _refine.solvent_model_param_bsol 43.744 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details 'THE GAMMA PHOSPHATE OF GTP IS DISORDERED ON CHAINS X AND Z' _refine.pdbx_starting_model 'PDB ENTRY 3F2Q' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.35 _refine.pdbx_overall_phase_error 24.50 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2394 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 2470 _refine_hist.d_res_high 2.941 _refine_hist.d_res_low 26.292 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 2730 'X-RAY DIFFRACTION' ? f_angle_d 0.612 ? ? 4261 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 24.223 ? ? 1379 'X-RAY DIFFRACTION' ? f_chiral_restr 0.056 ? ? 556 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 112 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.9415 3.3664 2919 0.2639 97.00 0.3216 . . 165 . . 'X-RAY DIFFRACTION' . 3.3664 4.2384 3006 0.2005 99.00 0.2204 . . 163 . . 'X-RAY DIFFRACTION' . 4.2384 26.2933 3127 0.1911 98.00 0.2162 . . 179 . . # _struct.entry_id 2YIE _struct.title 'Crystal structure of a F. nucleatum FMN riboswitch bound to FMN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YIE _struct_keywords.pdbx_keywords RNA _struct_keywords.text RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 5 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 4 ? T N N 6 ? U N N 6 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? X GTP 1 X G 2 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? Z GTP 57 Z G 58 1_555 ? ? ? ? ? ? ? 1.606 ? ? metalc1 metalc ? ? A A 14 OP2 ? ? ? 1_555 G MG . MG ? ? X A 14 X MG 1059 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc2 metalc ? ? A U 23 OP2 ? ? ? 1_555 F MG . MG ? ? X U 23 X MG 1058 1_555 ? ? ? ? ? ? ? 2.804 ? ? metalc3 metalc ? ? A G 33 N7 ? ? ? 1_555 C MG . MG ? ? X G 33 X MG 1055 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1055 X HOH 2011 1_555 ? ? ? ? ? ? ? 1.852 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1055 X HOH 2012 1_555 ? ? ? ? ? ? ? 1.854 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1055 X HOH 2013 1_555 ? ? ? ? ? ? ? 1.885 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1055 X HOH 2014 1_555 ? ? ? ? ? ? ? 1.869 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 L FMN . O2P ? ? X MG 1055 Z FMN 1114 1_555 ? ? ? ? ? ? ? 2.415 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1056 X HOH 2005 1_555 ? ? ? ? ? ? ? 2.790 ? ? metalc10 metalc ? ? G MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1059 X HOH 2021 1_555 ? ? ? ? ? ? ? 1.846 ? ? metalc11 metalc ? ? G MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1059 X HOH 2022 1_555 ? ? ? ? ? ? ? 1.845 ? ? metalc12 metalc ? ? G MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1059 X HOH 2023 1_555 ? ? ? ? ? ? ? 1.850 ? ? metalc13 metalc ? ? G MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1059 X HOH 2024 1_555 ? ? ? ? ? ? ? 1.847 ? ? metalc14 metalc ? ? G MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1059 X HOH 2025 1_555 ? ? ? ? ? ? ? 1.844 ? ? metalc15 metalc ? ? H MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1060 X HOH 2002 1_555 ? ? ? ? ? ? ? 2.812 ? ? metalc16 metalc ? ? H MG . MG ? ? ? 1_555 T HOH . O ? ? X MG 1060 X HOH 2003 1_555 ? ? ? ? ? ? ? 2.685 ? ? metalc17 metalc ? ? B U 33 O4 ? ? ? 1_555 N MG . MG ? ? Z U 89 Z MG 1116 1_555 ? ? ? ? ? ? ? 2.539 ? ? metalc18 metalc ? ? B A 36 OP2 ? ? ? 1_555 N MG . MG ? ? Z A 92 Z MG 1116 1_555 ? ? ? ? ? ? ? 2.331 ? ? metalc19 metalc ? ? B C 39 OP1 ? ? ? 1_555 O MG . MG ? ? Z C 95 Z MG 1117 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc20 metalc ? ? N MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1116 Z HOH 2011 1_555 ? ? ? ? ? ? ? 1.851 ? ? metalc21 metalc ? ? N MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1116 Z HOH 2012 1_555 ? ? ? ? ? ? ? 1.854 ? ? metalc22 metalc ? ? N MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1116 Z HOH 2013 1_555 ? ? ? ? ? ? ? 1.892 ? ? metalc23 metalc ? ? N MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1116 Z HOH 2014 1_555 ? ? ? ? ? ? ? 1.867 ? ? metalc24 metalc ? ? O MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1117 Z HOH 2021 1_555 ? ? ? ? ? ? ? 1.848 ? ? metalc25 metalc ? ? O MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1117 Z HOH 2022 1_555 ? ? ? ? ? ? ? 1.842 ? ? metalc26 metalc ? ? O MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1117 Z HOH 2023 1_555 ? ? ? ? ? ? ? 1.851 ? ? metalc27 metalc ? ? O MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1117 Z HOH 2024 1_555 ? ? ? ? ? ? ? 1.849 ? ? metalc28 metalc ? ? O MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1117 Z HOH 2025 1_555 ? ? ? ? ? ? ? 1.843 ? ? metalc29 metalc ? ? P MG . MG ? ? ? 1_555 U HOH . O ? ? Z MG 1118 Z HOH 2003 1_555 ? ? ? ? ? ? ? 2.597 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 B C 56 N3 ? ? X GTP 1 Z C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 B C 56 O2 ? ? X GTP 1 Z C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 B C 56 N4 ? ? X GTP 1 Z C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 B U 55 O2 ? ? X G 2 Z U 111 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 B U 55 N3 ? ? X G 2 Z U 111 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 B U 54 N3 ? ? X A 3 Z U 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 B U 54 O4 ? ? X A 3 Z U 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 4 N3 ? ? ? 1_555 B A 53 N1 ? ? X U 4 Z A 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 O4 ? ? ? 1_555 B A 53 N6 ? ? X U 4 Z A 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N3 ? ? ? 1_555 B G 52 N1 ? ? X C 5 Z G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N4 ? ? ? 1_555 B G 52 O6 ? ? X C 5 Z G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 O2 ? ? ? 1_555 B G 52 N2 ? ? X C 5 Z G 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 N3 ? ? ? 1_555 B A 51 N1 ? ? X U 6 Z A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 O4 ? ? ? 1_555 B A 51 N6 ? ? X U 6 Z A 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 7 N3 ? ? ? 1_555 B A 50 N1 ? ? X U 7 Z A 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 7 O4 ? ? ? 1_555 B A 50 N6 ? ? X U 7 Z A 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 8 N3 ? ? ? 1_555 B G 49 N1 ? ? X C 8 Z G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N4 ? ? ? 1_555 B G 49 O6 ? ? X C 8 Z G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 O2 ? ? ? 1_555 B G 49 N2 ? ? X C 8 Z G 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 9 N2 ? ? ? 1_555 B A 48 N7 ? ? X G 9 Z A 104 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog21 hydrog ? ? A G 9 N3 ? ? ? 1_555 B A 48 N6 ? ? X G 9 Z A 104 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog22 hydrog ? ? A G 10 O6 ? ? ? 1_555 A G 47 N2 ? ? X G 10 X G 47 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog23 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 31 O2 ? ? X G 11 X C 31 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog24 hydrog ? ? A G 11 N2 ? ? ? 1_555 A G 32 N3 ? ? X G 11 X G 32 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog25 hydrog ? ? A G 12 N2 ? ? ? 1_555 B G 37 N3 ? ? X G 12 Z G 93 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog26 hydrog ? ? A G 12 N3 ? ? ? 1_555 B G 37 N2 ? ? X G 12 Z G 93 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog27 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 28 N1 ? ? X C 13 X G 28 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog28 hydrog ? ? A A 14 N6 ? ? ? 1_555 A G 28 N3 ? ? X A 14 X G 28 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog29 hydrog ? ? A A 14 N7 ? ? ? 1_555 A G 28 N2 ? ? X A 14 X G 28 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog30 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 27 N3 ? ? X G 15 X C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 27 O2 ? ? X G 15 X C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 27 N4 ? ? X G 15 X C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 26 N3 ? ? X G 16 X C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 26 O2 ? ? X G 16 X C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 26 N4 ? ? X G 16 X C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 25 N3 ? ? X G 17 X C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 25 O2 ? ? X G 17 X C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 25 N4 ? ? X G 17 X C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 22 N7 ? ? X U 18 X A 22 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog40 hydrog ? ? A U 18 O2 ? ? ? 1_555 A A 22 N6 ? ? X U 18 X A 22 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog41 hydrog ? ? A G 19 N2 ? ? ? 1_555 B A 34 N7 ? ? X G 19 Z A 90 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog42 hydrog ? ? A G 19 N3 ? ? ? 1_555 B A 34 N6 ? ? X G 19 Z A 90 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog43 hydrog ? ? A A 29 N1 ? ? ? 1_555 B U 38 N3 ? ? X A 29 Z U 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A A 29 N6 ? ? ? 1_555 B U 38 O4 ? ? X A 29 Z U 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 30 N3 ? ? ? 1_555 B G 37 N1 ? ? X C 30 Z G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 30 N4 ? ? ? 1_555 B G 37 O6 ? ? X C 30 Z G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 30 O2 ? ? ? 1_555 B G 37 N2 ? ? X C 30 Z G 93 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 31 N3 ? ? ? 1_555 B G 28 N1 ? ? X C 31 Z G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 31 N4 ? ? ? 1_555 B G 28 O6 ? ? X C 31 Z G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 31 O2 ? ? ? 1_555 B G 28 N2 ? ? X C 31 Z G 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 32 N1 ? ? ? 1_555 B C 27 N3 ? ? X G 32 Z C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 32 N2 ? ? ? 1_555 B C 27 O2 ? ? X G 32 Z C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 32 O6 ? ? ? 1_555 B C 27 N4 ? ? X G 32 Z C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 46 N3 ? ? X G 33 X C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 46 O2 ? ? X G 33 X C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 46 N4 ? ? X G 33 X C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 33 N2 ? ? ? 1_555 B A 48 N3 ? ? X G 33 Z A 104 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog58 hydrog ? ? A U 34 N3 ? ? ? 1_555 A A 45 N1 ? ? X U 34 X A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 34 O4 ? ? ? 1_555 A A 45 N6 ? ? X U 34 X A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 35 N1 ? ? ? 1_555 A C 44 N3 ? ? X G 35 X C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 35 N2 ? ? ? 1_555 A C 44 O2 ? ? X G 35 X C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 35 O6 ? ? ? 1_555 A C 44 N4 ? ? X G 35 X C 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 36 N1 ? ? ? 1_555 A C 43 N3 ? ? X G 36 X C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 36 N2 ? ? ? 1_555 A C 43 O2 ? ? X G 36 X C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 36 O6 ? ? ? 1_555 A C 43 N4 ? ? X G 36 X C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 37 N3 ? ? ? 1_555 A A 40 N7 ? ? X U 37 X A 40 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog67 hydrog ? ? A U 37 O2 ? ? ? 1_555 A A 40 N6 ? ? X U 37 X A 40 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog68 hydrog ? ? A A 38 N6 ? ? ? 1_555 B G 14 N3 ? ? X A 38 Z G 70 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog69 hydrog ? ? A A 38 N7 ? ? ? 1_555 B G 14 N2 ? ? X A 38 Z G 70 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog70 hydrog ? ? A G 41 N2 ? ? ? 1_555 B A 7 N3 ? ? X G 41 Z A 63 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog71 hydrog ? ? A G 41 N1 ? ? ? 1_555 B C 26 N3 ? ? X G 41 Z C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 41 N2 ? ? ? 1_555 B C 26 O2 ? ? X G 41 Z C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 41 O6 ? ? ? 1_555 B C 26 N4 ? ? X G 41 Z C 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A U 42 N3 ? ? ? 1_555 B A 25 N1 ? ? X U 42 Z A 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A U 42 O4 ? ? ? 1_555 B A 25 N6 ? ? X U 42 Z A 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 48 N6 ? ? ? 1_555 B U 5 O2 ? ? X A 48 Z U 61 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog77 hydrog ? ? A A 49 N6 ? ? ? 1_555 B U 4 O2 ? ? X A 49 Z U 60 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog78 hydrog ? ? A U 50 N3 ? ? ? 1_555 B A 3 N1 ? ? X U 50 Z A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A U 50 O4 ? ? ? 1_555 B A 3 N6 ? ? X U 50 Z A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 51 N3 ? ? ? 1_555 B G 2 N1 ? ? X C 51 Z G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 51 N4 ? ? ? 1_555 B G 2 O6 ? ? X C 51 Z G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 51 O2 ? ? ? 1_555 B G 2 N2 ? ? X C 51 Z G 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 52 N3 ? ? ? 1_555 B GTP 1 N1 ? ? X C 52 Z GTP 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 52 N4 ? ? ? 1_555 B GTP 1 O6 ? ? X C 52 Z GTP 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 52 O2 ? ? ? 1_555 B GTP 1 N2 ? ? X C 52 Z GTP 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 27 O2 ? ? Z G 62 Z C 83 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog87 hydrog ? ? B G 6 N2 ? ? ? 1_555 B G 28 N3 ? ? Z G 62 Z G 84 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog88 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 24 N1 ? ? Z U 64 Z A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B U 8 O4 ? ? ? 1_555 B A 24 N6 ? ? Z U 64 Z A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 23 N1 ? ? Z U 65 Z A 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 23 N6 ? ? Z U 65 Z A 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B U 10 N3 ? ? ? 1_555 B A 22 N1 ? ? Z U 66 Z A 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B U 10 O4 ? ? ? 1_555 B A 22 N6 ? ? Z U 66 Z A 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 21 N3 ? ? Z G 67 Z C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 21 O2 ? ? Z G 67 Z C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 21 N4 ? ? Z G 67 Z C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B G 12 N1 ? ? ? 1_555 B C 20 N3 ? ? Z G 68 Z C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B G 12 N2 ? ? ? 1_555 B C 20 O2 ? ? Z G 68 Z C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B G 12 O6 ? ? ? 1_555 B C 20 N4 ? ? Z G 68 Z C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B U 13 N3 ? ? ? 1_555 B A 17 N7 ? ? Z U 69 Z A 73 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog101 hydrog ? ? B U 13 O2 ? ? ? 1_555 B A 17 N6 ? ? Z U 69 Z A 73 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog102 hydrog ? ? B A 29 N1 ? ? ? 1_555 B G 42 N1 ? ? Z A 85 Z G 98 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog103 hydrog ? ? B A 29 N6 ? ? ? 1_555 B G 42 O6 ? ? Z A 85 Z G 98 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog104 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 41 N1 ? ? Z C 86 Z G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 41 O6 ? ? Z C 86 Z G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 41 N2 ? ? Z C 86 Z G 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B A 31 N1 ? ? ? 1_555 B U 40 N3 ? ? Z A 87 Z U 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B A 31 N6 ? ? ? 1_555 B U 40 O4 ? ? Z A 87 Z U 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 39 N3 ? ? Z G 88 Z C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 39 O2 ? ? Z G 88 Z C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 39 N4 ? ? Z G 88 Z C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B U 33 N3 ? ? ? 1_555 B A 36 N7 ? ? Z U 89 Z A 92 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog113 hydrog ? ? B U 33 O2 ? ? ? 1_555 B A 36 N6 ? ? Z U 89 Z A 92 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software Z FMN 1114 ? 14 'BINDING SITE FOR RESIDUE FMN Z 1114' AC2 Software X MG 1060 ? 2 'BINDING SITE FOR RESIDUE MG X 1060' AC3 Software Z MG 1115 ? 1 'BINDING SITE FOR RESIDUE MG Z 1115' AC4 Software Z MG 1116 ? 6 'BINDING SITE FOR RESIDUE MG Z 1116' AC5 Software X MG 1055 ? 6 'BINDING SITE FOR RESIDUE MG X 1055' AC6 Software X MG 1061 ? 1 'BINDING SITE FOR RESIDUE MG X 1061' AC7 Software Z MG 1117 ? 6 'BINDING SITE FOR RESIDUE MG Z 1117' AC8 Software Z MG 1118 ? 2 'BINDING SITE FOR RESIDUE MG Z 1118' AC9 Software X MG 1056 ? 3 'BINDING SITE FOR RESIDUE MG X 1056' BC1 Software X MG 1058 ? 2 'BINDING SITE FOR RESIDUE MG X 1058' BC2 Software X MG 1059 ? 6 'BINDING SITE FOR RESIDUE MG X 1059' BC3 Software Z MG 1119 ? 2 'BINDING SITE FOR RESIDUE MG Z 1119' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 G A 10 ? G X 10 . ? 1_555 ? 2 AC1 14 G A 11 ? G X 11 . ? 1_555 ? 3 AC1 14 G A 32 ? G X 32 . ? 1_555 ? 4 AC1 14 A A 48 ? A X 48 . ? 1_555 ? 5 AC1 14 A A 49 ? A X 49 . ? 1_555 ? 6 AC1 14 MG C . ? MG X 1055 . ? 1_555 ? 7 AC1 14 HOH T . ? HOH X 2011 . ? 1_555 ? 8 AC1 14 HOH T . ? HOH X 2013 . ? 1_555 ? 9 AC1 14 U B 5 ? U Z 61 . ? 1_555 ? 10 AC1 14 G B 6 ? G Z 62 . ? 1_555 ? 11 AC1 14 G B 28 ? G Z 84 . ? 1_555 ? 12 AC1 14 A B 29 ? A Z 85 . ? 1_555 ? 13 AC1 14 G B 42 ? G Z 98 . ? 1_555 ? 14 AC1 14 A B 43 ? A Z 99 . ? 1_555 ? 15 AC2 2 HOH T . ? HOH X 2002 . ? 1_555 ? 16 AC2 2 HOH T . ? HOH X 2003 . ? 1_555 ? 17 AC3 1 G B 37 ? G Z 93 . ? 1_555 ? 18 AC4 6 U B 33 ? U Z 89 . ? 1_555 ? 19 AC4 6 A B 36 ? A Z 92 . ? 1_555 ? 20 AC4 6 HOH U . ? HOH Z 2011 . ? 1_555 ? 21 AC4 6 HOH U . ? HOH Z 2012 . ? 1_555 ? 22 AC4 6 HOH U . ? HOH Z 2013 . ? 1_555 ? 23 AC4 6 HOH U . ? HOH Z 2014 . ? 1_555 ? 24 AC5 6 G A 33 ? G X 33 . ? 1_555 ? 25 AC5 6 HOH T . ? HOH X 2011 . ? 1_555 ? 26 AC5 6 HOH T . ? HOH X 2012 . ? 1_555 ? 27 AC5 6 HOH T . ? HOH X 2013 . ? 1_555 ? 28 AC5 6 HOH T . ? HOH X 2014 . ? 1_555 ? 29 AC5 6 FMN L . ? FMN Z 1114 . ? 1_555 ? 30 AC6 1 U A 54 ? U X 54 . ? 3_534 ? 31 AC7 6 C B 39 ? C Z 95 . ? 1_555 ? 32 AC7 6 HOH U . ? HOH Z 2021 . ? 1_555 ? 33 AC7 6 HOH U . ? HOH Z 2022 . ? 1_555 ? 34 AC7 6 HOH U . ? HOH Z 2023 . ? 1_555 ? 35 AC7 6 HOH U . ? HOH Z 2024 . ? 1_555 ? 36 AC7 6 HOH U . ? HOH Z 2025 . ? 1_555 ? 37 AC8 2 G B 12 ? G Z 68 . ? 1_555 ? 38 AC8 2 HOH U . ? HOH Z 2003 . ? 1_555 ? 39 AC9 3 C A 13 ? C X 13 . ? 1_555 ? 40 AC9 3 G A 28 ? G X 28 . ? 1_555 ? 41 AC9 3 HOH T . ? HOH X 2005 . ? 1_555 ? 42 BC1 2 A A 22 ? A X 22 . ? 1_555 ? 43 BC1 2 U A 23 ? U X 23 . ? 1_555 ? 44 BC2 6 A A 14 ? A X 14 . ? 1_555 ? 45 BC2 6 HOH T . ? HOH X 2021 . ? 1_555 ? 46 BC2 6 HOH T . ? HOH X 2022 . ? 1_555 ? 47 BC2 6 HOH T . ? HOH X 2023 . ? 1_555 ? 48 BC2 6 HOH T . ? HOH X 2024 . ? 1_555 ? 49 BC2 6 HOH T . ? HOH X 2025 . ? 1_555 ? 50 BC3 2 A B 34 ? A Z 90 . ? 1_555 ? 51 BC3 2 G B 35 ? G Z 91 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YIE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YIE _atom_sites.fract_transf_matrix[1][1] 0.013572 _atom_sites.fract_transf_matrix[1][2] 0.007836 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015672 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007181 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K MG N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 1 GTP GTP X . n A 1 2 G 2 2 2 G G X . n A 1 3 A 3 3 3 A A X . n A 1 4 U 4 4 4 U U X . n A 1 5 C 5 5 5 C C X . n A 1 6 U 6 6 6 U U X . n A 1 7 U 7 7 7 U U X . n A 1 8 C 8 8 8 C C X . n A 1 9 G 9 9 9 G G X . n A 1 10 G 10 10 10 G G X . n A 1 11 G 11 11 11 G G X . n A 1 12 G 12 12 12 G G X . n A 1 13 C 13 13 13 C C X . n A 1 14 A 14 14 14 A A X . n A 1 15 G 15 15 15 G G X . n A 1 16 G 16 16 16 G G X . n A 1 17 G 17 17 17 G G X . n A 1 18 U 18 18 18 U U X . n A 1 19 G 19 19 19 G G X . n A 1 20 A 20 20 20 A A X . n A 1 21 A 21 21 21 A A X . n A 1 22 A 22 22 22 A A X . n A 1 23 U 23 23 23 U U X . n A 1 24 U 24 24 24 U U X . n A 1 25 C 25 25 25 C C X . n A 1 26 C 26 26 26 C C X . n A 1 27 C 27 27 27 C C X . n A 1 28 G 28 28 28 G G X . n A 1 29 A 29 29 29 A A X . n A 1 30 C 30 30 30 C C X . n A 1 31 C 31 31 31 C C X . n A 1 32 G 32 32 32 G G X . n A 1 33 G 33 33 33 G G X . n A 1 34 U 34 34 34 U U X . n A 1 35 G 35 35 35 G G X . n A 1 36 G 36 36 36 G G X . n A 1 37 U 37 37 37 U U X . n A 1 38 A 38 38 38 A A X . n A 1 39 U 39 39 39 U U X . n A 1 40 A 40 40 40 A A X . n A 1 41 G 41 41 41 G G X . n A 1 42 U 42 42 42 U U X . n A 1 43 C 43 43 43 C C X . n A 1 44 C 44 44 44 C C X . n A 1 45 A 45 45 45 A A X . n A 1 46 C 46 46 46 C C X . n A 1 47 G 47 47 47 G G X . n A 1 48 A 48 48 48 A A X . n A 1 49 A 49 49 49 A A X . n A 1 50 U 50 50 50 U U X . n A 1 51 C 51 51 51 C C X . n A 1 52 C 52 52 52 C C X . n A 1 53 A 53 53 53 A A X . n A 1 54 U 54 54 54 U U X . n B 2 1 GTP 1 57 57 GTP GTP Z . n B 2 2 G 2 58 58 G G Z . n B 2 3 A 3 59 59 A A Z . n B 2 4 U 4 60 60 U U Z . n B 2 5 U 5 61 61 U U Z . n B 2 6 G 6 62 62 G G Z . n B 2 7 A 7 63 63 A A Z . n B 2 8 U 8 64 64 U U Z . n B 2 9 U 9 65 65 U U Z . n B 2 10 U 10 66 66 U U Z . n B 2 11 G 11 67 67 G G Z . n B 2 12 G 12 68 68 G G Z . n B 2 13 U 13 69 69 U U Z . n B 2 14 G 14 70 70 G G Z . n B 2 15 A 15 71 71 A A Z . n B 2 16 A 16 72 72 A A Z . n B 2 17 A 17 73 73 A A Z . n B 2 18 U 18 74 74 U U Z . n B 2 19 U 19 75 75 U U Z . n B 2 20 C 20 76 76 C C Z . n B 2 21 C 21 77 77 C C Z . n B 2 22 A 22 78 78 A A Z . n B 2 23 A 23 79 79 A A Z . n B 2 24 A 24 80 80 A A Z . n B 2 25 A 25 81 81 A A Z . n B 2 26 C 26 82 82 C C Z . n B 2 27 C 27 83 83 C C Z . n B 2 28 G 28 84 84 G G Z . n B 2 29 A 29 85 85 A A Z . n B 2 30 C 30 86 86 C C Z . n B 2 31 A 31 87 87 A A Z . n B 2 32 G 32 88 88 G G Z . n B 2 33 U 33 89 89 U U Z . n B 2 34 A 34 90 90 A A Z . n B 2 35 G 35 91 91 G G Z . n B 2 36 A 36 92 92 A A Z . n B 2 37 G 37 93 93 G G Z . n B 2 38 U 38 94 94 U U Z . n B 2 39 C 39 95 95 C C Z . n B 2 40 U 40 96 96 U U Z . n B 2 41 G 41 97 97 G G Z . n B 2 42 G 42 98 98 G G Z . n B 2 43 A 43 99 99 A A Z . n B 2 44 U 44 100 100 U U Z . n B 2 45 G 45 101 101 G G Z . n B 2 46 A 46 102 102 A A Z . n B 2 47 G 47 103 103 G G Z . n B 2 48 A 48 104 104 A A Z . n B 2 49 G 49 105 105 G G Z . n B 2 50 A 50 106 106 A A Z . n B 2 51 A 51 107 107 A A Z . n B 2 52 G 52 108 108 G G Z . n B 2 53 A 53 109 109 A A Z . n B 2 54 U 54 110 110 U U Z . n B 2 55 U 55 111 111 U U Z . n B 2 56 C 56 112 112 C C Z . n B 2 57 G 57 113 113 G G Z . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG 1 1055 1055 MG MG X . D 3 MG 1 1056 1056 MG MG X . E 3 MG 1 1057 1057 MG MG X . F 3 MG 1 1058 1058 MG MG X . G 3 MG 1 1059 1059 MG MG X . H 3 MG 1 1060 1060 MG MG X . I 3 MG 1 1061 1061 MG MG X . J 3 MG 1 1062 1062 MG MG X . K 4 K 1 1063 1063 K K X . L 5 FMN 1 1114 1114 FMN FMN Z . M 3 MG 1 1115 1115 MG MG Z . N 3 MG 1 1116 1116 MG MG Z . O 3 MG 1 1117 1117 MG MG Z . P 3 MG 1 1118 1118 MG MG Z . Q 3 MG 1 1119 1119 MG MG Z . R 3 MG 1 1120 1120 MG MG Z . S 4 K 1 1121 1121 K K Z . T 6 HOH 1 2001 2001 HOH HOH X . T 6 HOH 2 2002 2002 HOH HOH X . T 6 HOH 3 2003 2003 HOH HOH X . T 6 HOH 4 2004 2004 HOH HOH X . T 6 HOH 5 2005 2005 HOH HOH X . T 6 HOH 6 2006 2006 HOH HOH X . T 6 HOH 7 2007 2007 HOH HOH X . T 6 HOH 8 2011 2011 HOH HOH X . T 6 HOH 9 2012 2012 HOH HOH X . T 6 HOH 10 2013 2013 HOH HOH X . T 6 HOH 11 2014 2014 HOH HOH X . T 6 HOH 12 2021 2021 HOH HOH X . T 6 HOH 13 2022 2022 HOH HOH X . T 6 HOH 14 2023 2023 HOH HOH X . T 6 HOH 15 2024 2024 HOH HOH X . T 6 HOH 16 2025 2025 HOH HOH X . U 6 HOH 1 2001 2001 HOH HOH Z . U 6 HOH 2 2002 2002 HOH HOH Z . U 6 HOH 3 2003 2003 HOH HOH Z . U 6 HOH 4 2004 2004 HOH HOH Z . U 6 HOH 5 2011 2011 HOH HOH Z . U 6 HOH 6 2012 2012 HOH HOH Z . U 6 HOH 7 2013 2013 HOH HOH Z . U 6 HOH 8 2014 2014 HOH HOH Z . U 6 HOH 9 2021 2021 HOH HOH Z . U 6 HOH 10 2022 2022 HOH HOH Z . U 6 HOH 11 2023 2023 HOH HOH Z . U 6 HOH 12 2024 2024 HOH HOH Z . U 6 HOH 13 2025 2025 HOH HOH Z . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GTP 1 X GTP 1 ? G "GUANOSINE-5'-TRIPHOSPHATE" 2 B GTP 1 Z GTP 57 ? G "GUANOSINE-5'-TRIPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9541 ? 1 MORE -87.4 ? 1 'SSA (A^2)' 16104 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A A 14 ? X A 14 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2021 ? 1_555 95.0 ? 2 OP2 ? A A 14 ? X A 14 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2022 ? 1_555 84.7 ? 3 O ? T HOH . ? X HOH 2021 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2022 ? 1_555 179.7 ? 4 OP2 ? A A 14 ? X A 14 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2023 ? 1_555 173.5 ? 5 O ? T HOH . ? X HOH 2021 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2023 ? 1_555 90.4 ? 6 O ? T HOH . ? X HOH 2022 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2023 ? 1_555 89.9 ? 7 OP2 ? A A 14 ? X A 14 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2024 ? 1_555 94.2 ? 8 O ? T HOH . ? X HOH 2021 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2024 ? 1_555 88.6 ? 9 O ? T HOH . ? X HOH 2022 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2024 ? 1_555 91.5 ? 10 O ? T HOH . ? X HOH 2023 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2024 ? 1_555 89.6 ? 11 OP2 ? A A 14 ? X A 14 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2025 ? 1_555 85.5 ? 12 O ? T HOH . ? X HOH 2021 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2025 ? 1_555 91.5 ? 13 O ? T HOH . ? X HOH 2022 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2025 ? 1_555 88.5 ? 14 O ? T HOH . ? X HOH 2023 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2025 ? 1_555 90.6 ? 15 O ? T HOH . ? X HOH 2024 ? 1_555 MG ? G MG . ? X MG 1059 ? 1_555 O ? T HOH . ? X HOH 2025 ? 1_555 179.8 ? 16 N7 ? A G 33 ? X G 33 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2011 ? 1_555 84.5 ? 17 N7 ? A G 33 ? X G 33 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2012 ? 1_555 94.4 ? 18 O ? T HOH . ? X HOH 2011 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2012 ? 1_555 177.4 ? 19 N7 ? A G 33 ? X G 33 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2013 ? 1_555 166.7 ? 20 O ? T HOH . ? X HOH 2011 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2013 ? 1_555 91.2 ? 21 O ? T HOH . ? X HOH 2012 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2013 ? 1_555 90.4 ? 22 N7 ? A G 33 ? X G 33 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2014 ? 1_555 76.8 ? 23 O ? T HOH . ? X HOH 2011 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2014 ? 1_555 90.2 ? 24 O ? T HOH . ? X HOH 2012 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2014 ? 1_555 91.9 ? 25 O ? T HOH . ? X HOH 2013 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O ? T HOH . ? X HOH 2014 ? 1_555 90.6 ? 26 N7 ? A G 33 ? X G 33 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O2P ? L FMN . ? Z FMN 1114 ? 1_555 99.4 ? 27 O ? T HOH . ? X HOH 2011 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O2P ? L FMN . ? Z FMN 1114 ? 1_555 83.1 ? 28 O ? T HOH . ? X HOH 2012 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O2P ? L FMN . ? Z FMN 1114 ? 1_555 94.8 ? 29 O ? T HOH . ? X HOH 2013 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O2P ? L FMN . ? Z FMN 1114 ? 1_555 92.5 ? 30 O ? T HOH . ? X HOH 2014 ? 1_555 MG ? C MG . ? X MG 1055 ? 1_555 O2P ? L FMN . ? Z FMN 1114 ? 1_555 172.6 ? 31 O ? T HOH . ? X HOH 2002 ? 1_555 MG ? H MG . ? X MG 1060 ? 1_555 O ? T HOH . ? X HOH 2003 ? 1_555 111.1 ? 32 O4 ? B U 33 ? Z U 89 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 OP2 ? B A 36 ? Z A 92 ? 1_555 89.8 ? 33 O4 ? B U 33 ? Z U 89 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2011 ? 1_555 78.4 ? 34 OP2 ? B A 36 ? Z A 92 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2011 ? 1_555 93.1 ? 35 O4 ? B U 33 ? Z U 89 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2012 ? 1_555 100.8 ? 36 OP2 ? B A 36 ? Z A 92 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2012 ? 1_555 84.5 ? 37 O ? U HOH . ? Z HOH 2011 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2012 ? 1_555 177.5 ? 38 O4 ? B U 33 ? Z U 89 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2013 ? 1_555 90.9 ? 39 OP2 ? B A 36 ? Z A 92 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2013 ? 1_555 173.9 ? 40 O ? U HOH . ? Z HOH 2011 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2013 ? 1_555 93.0 ? 41 O ? U HOH . ? Z HOH 2012 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2013 ? 1_555 89.4 ? 42 O4 ? B U 33 ? Z U 89 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2014 ? 1_555 167.9 ? 43 OP2 ? B A 36 ? Z A 92 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2014 ? 1_555 88.9 ? 44 O ? U HOH . ? Z HOH 2011 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2014 ? 1_555 89.7 ? 45 O ? U HOH . ? Z HOH 2012 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2014 ? 1_555 91.0 ? 46 O ? U HOH . ? Z HOH 2013 ? 1_555 MG ? N MG . ? Z MG 1116 ? 1_555 O ? U HOH . ? Z HOH 2014 ? 1_555 91.6 ? 47 OP1 ? B C 39 ? Z C 95 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2021 ? 1_555 102.9 ? 48 OP1 ? B C 39 ? Z C 95 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2022 ? 1_555 76.9 ? 49 O ? U HOH . ? Z HOH 2021 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2022 ? 1_555 179.8 ? 50 OP1 ? B C 39 ? Z C 95 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2023 ? 1_555 165.8 ? 51 O ? U HOH . ? Z HOH 2021 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2023 ? 1_555 90.1 ? 52 O ? U HOH . ? Z HOH 2022 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2023 ? 1_555 90.1 ? 53 OP1 ? B C 39 ? Z C 95 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2024 ? 1_555 95.6 ? 54 O ? U HOH . ? Z HOH 2021 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2024 ? 1_555 89.0 ? 55 O ? U HOH . ? Z HOH 2022 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2024 ? 1_555 91.0 ? 56 O ? U HOH . ? Z HOH 2023 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2024 ? 1_555 90.3 ? 57 OP1 ? B C 39 ? Z C 95 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2025 ? 1_555 84.3 ? 58 O ? U HOH . ? Z HOH 2021 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2025 ? 1_555 91.1 ? 59 O ? U HOH . ? Z HOH 2022 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2025 ? 1_555 88.9 ? 60 O ? U HOH . ? Z HOH 2023 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2025 ? 1_555 89.7 ? 61 O ? U HOH . ? Z HOH 2024 ? 1_555 MG ? O MG . ? Z MG 1117 ? 1_555 O ? U HOH . ? Z HOH 2025 ? 1_555 179.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-31 2 'Structure model' 1 1 2011-11-09 3 'Structure model' 1 2 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.value' 20 3 'Structure model' '_struct_conn.conn_type_id' 21 3 'Structure model' '_struct_conn.id' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 6.8853 -62.8810 -58.7253 0.7305 2.3537 1.5153 -0.1247 0.2952 -0.3735 1.2494 8.3190 0.2562 1.1174 -0.0151 -1.4755 0.1555 1.9402 0.7914 -0.4400 0.3006 1.9285 0.2890 2.2825 -0.3170 'X-RAY DIFFRACTION' 2 ? refined 27.3050 -58.9100 -71.5769 0.7719 0.7859 0.5534 -0.0698 -0.0554 -0.0158 0.9540 0.8402 0.8198 0.2247 0.0632 0.2470 -0.1855 0.2348 -0.2243 -0.0193 0.2102 0.0048 0.7215 -0.3192 -0.0660 'X-RAY DIFFRACTION' 3 ? refined 28.9350 -44.7541 -80.8539 0.3626 0.3714 0.4612 -0.0585 0.0799 -0.1083 3.7990 1.2130 2.5729 0.5282 -0.5077 1.0356 0.0650 -0.7587 1.4197 -0.0356 -0.1216 0.4950 -0.4135 0.2492 0.0035 'X-RAY DIFFRACTION' 4 ? refined 18.5514 -76.1059 -75.6039 0.7615 0.6762 0.6258 -0.0036 0.0274 0.0137 1.8644 1.2484 0.9681 -1.0002 -0.0341 -1.2305 0.0874 -0.0709 0.1701 -0.2482 0.0379 0.0502 0.4192 0.1422 -0.0150 'X-RAY DIFFRACTION' 5 ? refined -0.6527 -65.4455 -77.1439 0.6922 1.0212 1.3457 0.1598 -0.0214 0.0779 0.2093 1.8212 0.7906 0.1547 0.5002 0.4870 0.1665 -0.2261 -0.7776 -0.0700 -0.3998 1.2533 0.2250 -0.9875 0.0273 'X-RAY DIFFRACTION' 6 ? refined -13.1103 -46.4331 -81.9627 1.0770 0.6860 1.3655 0.3964 -0.1189 0.0082 6.0776 5.3655 2.1374 5.3235 0.1629 1.3098 0.4044 0.0691 0.9332 1.5368 -1.1105 1.8959 0.2776 0.7149 -0.0845 'X-RAY DIFFRACTION' 7 ? refined -11.8801 -48.8534 -75.1036 2.4400 0.9625 1.4851 0.2883 -0.1985 0.1294 1.9703 5.1377 2.5708 -2.8760 -1.3283 3.2657 -1.1927 0.4362 -0.1583 1.2970 -0.1910 1.3605 -0.1984 0.0959 0.6283 'X-RAY DIFFRACTION' 8 ? refined -5.4727 -61.0906 -84.3032 0.6266 1.2454 1.2216 0.1358 -0.2954 0.1638 2.1932 2.2652 0.1501 2.1280 0.1882 0.0176 1.0522 -0.6011 -0.4799 0.3017 -0.6791 -0.4102 0.0693 -0.1970 -0.0614 'X-RAY DIFFRACTION' 9 ? refined 22.8874 -80.1053 -86.2377 0.7529 0.6518 0.6160 0.1533 -0.0559 -0.0081 0.5725 0.9294 0.7896 -0.2901 -0.2845 0.7536 -0.1864 -0.0300 -0.0653 0.3239 0.0377 0.0225 0.5285 0.2747 0.0916 'X-RAY DIFFRACTION' 10 ? refined 24.9118 -80.7683 -82.2455 0.5135 0.4858 0.4845 0.0952 -0.0819 -0.0717 1.0551 0.3412 0.4629 -0.9415 0.1443 -0.0366 -0.0313 0.3074 0.0762 0.2494 0.2300 0.0142 -0.0162 0.0313 -0.0542 'X-RAY DIFFRACTION' 11 ? refined 13.7694 -54.3297 -74.3904 0.6710 0.6637 0.7000 0.0525 0.0306 0.0037 1.8636 0.4078 1.8002 0.4330 -1.4078 0.1618 0.0629 -0.2022 0.0868 -0.0423 0.1609 -0.0920 -0.4923 0.0467 -0.1412 'X-RAY DIFFRACTION' 12 ? refined 2.0883 -70.7748 -57.4857 0.5309 1.3553 0.6860 -0.0750 0.3220 0.2745 3.1116 0.6152 1.6284 0.6692 -2.2274 -0.3502 0.6390 -1.4264 -0.6753 0.1715 0.4721 0.4956 -0.2259 -0.9746 0.4400 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(CHAIN Z AND RESID 57:61)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(CHAIN Z AND RESID 62:66)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(CHAIN Z AND RESID 67:78)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(CHAIN Z AND RESID 79:98)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(CHAIN Z AND RESID 99:106)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(CHAIN Z AND RESID 107:113)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(CHAIN X AND RESID 1:5)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(CHAIN X AND RESID 6:9)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(CHAIN X AND RESID 10:19)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(CHAIN X AND RESID 20:32)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(CHAIN X AND RESID 33:48)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(CHAIN X AND RESID 49:54)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 HKL-2000 'data scaling' . ? 2 CNS phasing . ? 3 # _pdbx_entry_details.entry_id 2YIE _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN X, A 2542 TO U ENGINEERED RESIDUE IN CHAIN X, G 2543 TO C ENGINEERED RESIDUE IN CHAIN X, U 2544 TO C ENGINEERED RESIDUE IN CHAIN Z, C 2550 TO G ENGINEERED RESIDUE IN CHAIN Z, U 2551 TO A ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X GTP 1 ? PG ? A GTP 1 PG 2 1 Y 1 X GTP 1 ? O1G ? A GTP 1 O1G 3 1 Y 1 X GTP 1 ? O2G ? A GTP 1 O2G 4 1 Y 1 X GTP 1 ? O3G ? A GTP 1 O3G 5 1 Y 1 Z GTP 57 ? PG ? B GTP 1 PG 6 1 Y 1 Z GTP 57 ? O1G ? B GTP 1 O1G 7 1 Y 1 Z GTP 57 ? O2G ? B GTP 1 O2G 8 1 Y 1 Z GTP 57 ? O3G ? B GTP 1 O3G # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 FMN N1 N N N 73 FMN C2 C N N 74 FMN O2 O N N 75 FMN N3 N N N 76 FMN C4 C N N 77 FMN O4 O N N 78 FMN C4A C N N 79 FMN N5 N N N 80 FMN C5A C Y N 81 FMN C6 C Y N 82 FMN C7 C Y N 83 FMN C7M C N N 84 FMN C8 C Y N 85 FMN C8M C N N 86 FMN C9 C Y N 87 FMN C9A C Y N 88 FMN N10 N N N 89 FMN C10 C N N 90 FMN "C1'" C N N 91 FMN "C2'" C N S 92 FMN "O2'" O N N 93 FMN "C3'" C N S 94 FMN "O3'" O N N 95 FMN "C4'" C N R 96 FMN "O4'" O N N 97 FMN "C5'" C N N 98 FMN "O5'" O N N 99 FMN P P N N 100 FMN O1P O N N 101 FMN O2P O N N 102 FMN O3P O N N 103 FMN HN3 H N N 104 FMN H6 H N N 105 FMN HM71 H N N 106 FMN HM72 H N N 107 FMN HM73 H N N 108 FMN HM81 H N N 109 FMN HM82 H N N 110 FMN HM83 H N N 111 FMN H9 H N N 112 FMN "H1'1" H N N 113 FMN "H1'2" H N N 114 FMN "H2'" H N N 115 FMN "HO2'" H N N 116 FMN "H3'" H N N 117 FMN "HO3'" H N N 118 FMN "H4'" H N N 119 FMN "HO4'" H N N 120 FMN "H5'1" H N N 121 FMN "H5'2" H N N 122 FMN HOP2 H N N 123 FMN HOP3 H N N 124 G OP3 O N N 125 G P P N N 126 G OP1 O N N 127 G OP2 O N N 128 G "O5'" O N N 129 G "C5'" C N N 130 G "C4'" C N R 131 G "O4'" O N N 132 G "C3'" C N S 133 G "O3'" O N N 134 G "C2'" C N R 135 G "O2'" O N N 136 G "C1'" C N R 137 G N9 N Y N 138 G C8 C Y N 139 G N7 N Y N 140 G C5 C Y N 141 G C6 C N N 142 G O6 O N N 143 G N1 N N N 144 G C2 C N N 145 G N2 N N N 146 G N3 N N N 147 G C4 C Y N 148 G HOP3 H N N 149 G HOP2 H N N 150 G "H5'" H N N 151 G "H5''" H N N 152 G "H4'" H N N 153 G "H3'" H N N 154 G "HO3'" H N N 155 G "H2'" H N N 156 G "HO2'" H N N 157 G "H1'" H N N 158 G H8 H N N 159 G H1 H N N 160 G H21 H N N 161 G H22 H N N 162 GTP PG P N N 163 GTP O1G O N N 164 GTP O2G O N N 165 GTP O3G O N N 166 GTP O3B O N N 167 GTP PB P N N 168 GTP O1B O N N 169 GTP O2B O N N 170 GTP O3A O N N 171 GTP PA P N N 172 GTP O1A O N N 173 GTP O2A O N N 174 GTP "O5'" O N N 175 GTP "C5'" C N N 176 GTP "C4'" C N R 177 GTP "O4'" O N N 178 GTP "C3'" C N S 179 GTP "O3'" O N N 180 GTP "C2'" C N R 181 GTP "O2'" O N N 182 GTP "C1'" C N R 183 GTP N9 N Y N 184 GTP C8 C Y N 185 GTP N7 N Y N 186 GTP C5 C Y N 187 GTP C6 C N N 188 GTP O6 O N N 189 GTP N1 N N N 190 GTP C2 C N N 191 GTP N2 N N N 192 GTP N3 N N N 193 GTP C4 C Y N 194 GTP HOG2 H N N 195 GTP HOG3 H N N 196 GTP HOB2 H N N 197 GTP HOA2 H N N 198 GTP "H5'" H N N 199 GTP "H5''" H N N 200 GTP "H4'" H N N 201 GTP "H3'" H N N 202 GTP "HO3'" H N N 203 GTP "H2'" H N N 204 GTP "HO2'" H N N 205 GTP "H1'" H N N 206 GTP H8 H N N 207 GTP HN1 H N N 208 GTP HN21 H N N 209 GTP HN22 H N N 210 HOH O O N N 211 HOH H1 H N N 212 HOH H2 H N N 213 K K K N N 214 MG MG MG N N 215 U OP3 O N N 216 U P P N N 217 U OP1 O N N 218 U OP2 O N N 219 U "O5'" O N N 220 U "C5'" C N N 221 U "C4'" C N R 222 U "O4'" O N N 223 U "C3'" C N S 224 U "O3'" O N N 225 U "C2'" C N R 226 U "O2'" O N N 227 U "C1'" C N R 228 U N1 N N N 229 U C2 C N N 230 U O2 O N N 231 U N3 N N N 232 U C4 C N N 233 U O4 O N N 234 U C5 C N N 235 U C6 C N N 236 U HOP3 H N N 237 U HOP2 H N N 238 U "H5'" H N N 239 U "H5''" H N N 240 U "H4'" H N N 241 U "H3'" H N N 242 U "HO3'" H N N 243 U "H2'" H N N 244 U "HO2'" H N N 245 U "H1'" H N N 246 U H3 H N N 247 U H5 H N N 248 U H6 H N N 249 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 FMN N1 C2 sing N N 76 FMN N1 C10 doub N N 77 FMN C2 O2 doub N N 78 FMN C2 N3 sing N N 79 FMN N3 C4 sing N N 80 FMN N3 HN3 sing N N 81 FMN C4 O4 doub N N 82 FMN C4 C4A sing N N 83 FMN C4A N5 doub N N 84 FMN C4A C10 sing N N 85 FMN N5 C5A sing N N 86 FMN C5A C6 doub Y N 87 FMN C5A C9A sing Y N 88 FMN C6 C7 sing Y N 89 FMN C6 H6 sing N N 90 FMN C7 C7M sing N N 91 FMN C7 C8 doub Y N 92 FMN C7M HM71 sing N N 93 FMN C7M HM72 sing N N 94 FMN C7M HM73 sing N N 95 FMN C8 C8M sing N N 96 FMN C8 C9 sing Y N 97 FMN C8M HM81 sing N N 98 FMN C8M HM82 sing N N 99 FMN C8M HM83 sing N N 100 FMN C9 C9A doub Y N 101 FMN C9 H9 sing N N 102 FMN C9A N10 sing N N 103 FMN N10 C10 sing N N 104 FMN N10 "C1'" sing N N 105 FMN "C1'" "C2'" sing N N 106 FMN "C1'" "H1'1" sing N N 107 FMN "C1'" "H1'2" sing N N 108 FMN "C2'" "O2'" sing N N 109 FMN "C2'" "C3'" sing N N 110 FMN "C2'" "H2'" sing N N 111 FMN "O2'" "HO2'" sing N N 112 FMN "C3'" "O3'" sing N N 113 FMN "C3'" "C4'" sing N N 114 FMN "C3'" "H3'" sing N N 115 FMN "O3'" "HO3'" sing N N 116 FMN "C4'" "O4'" sing N N 117 FMN "C4'" "C5'" sing N N 118 FMN "C4'" "H4'" sing N N 119 FMN "O4'" "HO4'" sing N N 120 FMN "C5'" "O5'" sing N N 121 FMN "C5'" "H5'1" sing N N 122 FMN "C5'" "H5'2" sing N N 123 FMN "O5'" P sing N N 124 FMN P O1P doub N N 125 FMN P O2P sing N N 126 FMN P O3P sing N N 127 FMN O2P HOP2 sing N N 128 FMN O3P HOP3 sing N N 129 G OP3 P sing N N 130 G OP3 HOP3 sing N N 131 G P OP1 doub N N 132 G P OP2 sing N N 133 G P "O5'" sing N N 134 G OP2 HOP2 sing N N 135 G "O5'" "C5'" sing N N 136 G "C5'" "C4'" sing N N 137 G "C5'" "H5'" sing N N 138 G "C5'" "H5''" sing N N 139 G "C4'" "O4'" sing N N 140 G "C4'" "C3'" sing N N 141 G "C4'" "H4'" sing N N 142 G "O4'" "C1'" sing N N 143 G "C3'" "O3'" sing N N 144 G "C3'" "C2'" sing N N 145 G "C3'" "H3'" sing N N 146 G "O3'" "HO3'" sing N N 147 G "C2'" "O2'" sing N N 148 G "C2'" "C1'" sing N N 149 G "C2'" "H2'" sing N N 150 G "O2'" "HO2'" sing N N 151 G "C1'" N9 sing N N 152 G "C1'" "H1'" sing N N 153 G N9 C8 sing Y N 154 G N9 C4 sing Y N 155 G C8 N7 doub Y N 156 G C8 H8 sing N N 157 G N7 C5 sing Y N 158 G C5 C6 sing N N 159 G C5 C4 doub Y N 160 G C6 O6 doub N N 161 G C6 N1 sing N N 162 G N1 C2 sing N N 163 G N1 H1 sing N N 164 G C2 N2 sing N N 165 G C2 N3 doub N N 166 G N2 H21 sing N N 167 G N2 H22 sing N N 168 G N3 C4 sing N N 169 GTP PG O1G doub N N 170 GTP PG O2G sing N N 171 GTP PG O3G sing N N 172 GTP PG O3B sing N N 173 GTP O2G HOG2 sing N N 174 GTP O3G HOG3 sing N N 175 GTP O3B PB sing N N 176 GTP PB O1B doub N N 177 GTP PB O2B sing N N 178 GTP PB O3A sing N N 179 GTP O2B HOB2 sing N N 180 GTP O3A PA sing N N 181 GTP PA O1A doub N N 182 GTP PA O2A sing N N 183 GTP PA "O5'" sing N N 184 GTP O2A HOA2 sing N N 185 GTP "O5'" "C5'" sing N N 186 GTP "C5'" "C4'" sing N N 187 GTP "C5'" "H5'" sing N N 188 GTP "C5'" "H5''" sing N N 189 GTP "C4'" "O4'" sing N N 190 GTP "C4'" "C3'" sing N N 191 GTP "C4'" "H4'" sing N N 192 GTP "O4'" "C1'" sing N N 193 GTP "C3'" "O3'" sing N N 194 GTP "C3'" "C2'" sing N N 195 GTP "C3'" "H3'" sing N N 196 GTP "O3'" "HO3'" sing N N 197 GTP "C2'" "O2'" sing N N 198 GTP "C2'" "C1'" sing N N 199 GTP "C2'" "H2'" sing N N 200 GTP "O2'" "HO2'" sing N N 201 GTP "C1'" N9 sing N N 202 GTP "C1'" "H1'" sing N N 203 GTP N9 C8 sing Y N 204 GTP N9 C4 sing Y N 205 GTP C8 N7 doub Y N 206 GTP C8 H8 sing N N 207 GTP N7 C5 sing Y N 208 GTP C5 C6 sing N N 209 GTP C5 C4 doub Y N 210 GTP C6 O6 doub N N 211 GTP C6 N1 sing N N 212 GTP N1 C2 sing N N 213 GTP N1 HN1 sing N N 214 GTP C2 N2 sing N N 215 GTP C2 N3 doub N N 216 GTP N2 HN21 sing N N 217 GTP N2 HN22 sing N N 218 GTP N3 C4 sing N N 219 HOH O H1 sing N N 220 HOH O H2 sing N N 221 U OP3 P sing N N 222 U OP3 HOP3 sing N N 223 U P OP1 doub N N 224 U P OP2 sing N N 225 U P "O5'" sing N N 226 U OP2 HOP2 sing N N 227 U "O5'" "C5'" sing N N 228 U "C5'" "C4'" sing N N 229 U "C5'" "H5'" sing N N 230 U "C5'" "H5''" sing N N 231 U "C4'" "O4'" sing N N 232 U "C4'" "C3'" sing N N 233 U "C4'" "H4'" sing N N 234 U "O4'" "C1'" sing N N 235 U "C3'" "O3'" sing N N 236 U "C3'" "C2'" sing N N 237 U "C3'" "H3'" sing N N 238 U "O3'" "HO3'" sing N N 239 U "C2'" "O2'" sing N N 240 U "C2'" "C1'" sing N N 241 U "C2'" "H2'" sing N N 242 U "O2'" "HO2'" sing N N 243 U "C1'" N1 sing N N 244 U "C1'" "H1'" sing N N 245 U N1 C2 sing N N 246 U N1 C6 sing N N 247 U C2 O2 doub N N 248 U C2 N3 sing N N 249 U N3 C4 sing N N 250 U N3 H3 sing N N 251 U C4 O4 doub N N 252 U C4 C5 sing N N 253 U C5 C6 doub N N 254 U C5 H5 sing N N 255 U C6 H6 sing N N 256 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2YIE 'double helix' 2YIE 'a-form double helix' 2YIE 'hairpin loop' 2YIE 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 B C 56 1_555 -0.636 -0.248 0.471 11.049 6.583 -4.541 1 X_GTP1:C112_Z X 1 ? Z 112 ? 19 1 1 A G 2 1_555 B U 55 1_555 -1.089 -0.504 -0.167 0.900 -11.939 -3.987 2 X_G2:U111_Z X 2 ? Z 111 ? 28 1 1 A A 3 1_555 B U 54 1_555 0.815 -0.193 -0.964 -16.871 -10.190 5.785 3 X_A3:U110_Z X 3 ? Z 110 ? 20 1 1 A U 4 1_555 B A 53 1_555 0.230 0.099 -0.075 -3.598 -16.963 9.131 4 X_U4:A109_Z X 4 ? Z 109 ? 20 1 1 A C 5 1_555 B G 52 1_555 0.570 0.119 0.199 1.970 -14.389 8.812 5 X_C5:G108_Z X 5 ? Z 108 ? 19 1 1 A U 6 1_555 B A 51 1_555 0.422 0.057 -0.304 4.596 -24.083 -1.531 6 X_U6:A107_Z X 6 ? Z 107 ? 20 1 1 A U 7 1_555 B A 50 1_555 -0.459 0.396 -0.346 7.785 -16.306 2.070 7 X_U7:A106_Z X 7 ? Z 106 ? 20 1 1 A C 8 1_555 B G 49 1_555 0.418 -0.009 0.622 -4.640 -16.049 5.953 8 X_C8:G105_Z X 8 ? Z 105 ? 19 1 1 A G 9 1_555 B A 48 1_555 6.632 -4.268 0.526 -24.169 -41.960 -9.332 9 X_G9:A104_Z X 9 ? Z 104 ? 11 10 1 A G 10 1_555 A G 47 1_555 -4.933 -1.516 0.024 28.465 -19.179 69.612 10 X_G10:G47_X X 10 ? X 47 ? ? ? 1 A G 33 1_555 A C 46 1_555 -0.477 -0.172 0.065 7.465 -11.313 3.927 11 X_G33:C46_X X 33 ? X 46 ? 19 1 1 A U 34 1_555 A A 45 1_555 0.301 -0.056 -0.252 -0.336 -20.440 5.495 12 X_U34:A45_X X 34 ? X 45 ? 20 1 1 A G 35 1_555 A C 44 1_555 0.040 0.103 -0.152 -14.293 -8.725 -3.835 13 X_G35:C44_X X 35 ? X 44 ? 19 1 1 A G 36 1_555 A C 43 1_555 -0.046 -0.090 -0.308 -17.601 -15.831 -2.394 14 X_G36:C43_X X 36 ? X 43 ? 19 1 1 A U 37 1_555 A A 40 1_555 4.354 -2.108 -1.507 4.950 -10.826 -97.159 15 X_U37:A40_X X 37 ? X 40 ? 24 4 1 A A 38 1_555 B G 14 1_555 -6.896 -4.214 0.334 -17.231 32.324 -0.718 16 X_A38:G70_Z X 38 ? Z 70 ? 11 10 1 B A 17 1_555 B U 13 1_555 -4.470 -1.796 0.615 -1.977 12.912 -89.039 17 Z_A73:U69_Z Z 73 ? Z 69 ? 24 4 1 B C 20 1_555 B G 12 1_555 -0.529 0.002 -0.210 14.758 -12.160 -2.321 18 Z_C76:G68_Z Z 76 ? Z 68 ? 19 1 1 B C 21 1_555 B G 11 1_555 -0.266 -0.141 0.289 4.714 -16.125 3.561 19 Z_C77:G67_Z Z 77 ? Z 67 ? 19 1 1 B A 22 1_555 B U 10 1_555 -0.282 -0.136 0.671 -0.833 -6.175 1.337 20 Z_A78:U66_Z Z 78 ? Z 66 ? 20 1 1 B A 23 1_555 B U 9 1_555 0.411 0.060 0.042 -6.425 -18.846 2.313 21 Z_A79:U65_Z Z 79 ? Z 65 ? 20 1 1 B A 24 1_555 B U 8 1_555 -0.142 -0.227 -0.078 -1.988 -1.177 9.334 22 Z_A80:U64_Z Z 80 ? Z 64 ? 20 1 1 B A 25 1_555 A U 42 1_555 0.377 -0.009 -0.619 -13.274 -8.040 -8.211 23 Z_A81:U42_X Z 81 ? X 42 ? 20 1 1 B C 26 1_555 A G 41 1_555 0.354 -0.173 -0.218 2.374 -25.259 6.886 24 Z_C82:G41_X Z 82 ? X 41 ? 19 1 1 B C 27 1_555 A G 32 1_555 -0.152 -0.059 0.792 -10.745 -7.544 -4.042 25 Z_C83:G32_X Z 83 ? X 32 ? 19 1 1 B G 28 1_555 A C 31 1_555 -0.381 0.168 0.669 18.572 -28.641 5.709 26 Z_G84:C31_X Z 84 ? X 31 ? 19 1 1 B G 37 1_555 A C 30 1_555 -0.304 -0.174 0.770 8.434 -23.871 2.036 27 Z_G93:C30_X Z 93 ? X 30 ? 19 1 1 B U 38 1_555 A A 29 1_555 -0.344 -0.086 -0.349 12.931 -9.388 1.381 28 Z_U94:A29_X Z 94 ? X 29 ? 20 1 1 A A 14 1_555 A G 28 1_555 -7.069 -4.113 0.119 2.472 -14.283 -3.519 29 X_A14:G28_X X 14 ? X 28 ? 11 10 1 A G 15 1_555 A C 27 1_555 -1.168 -0.303 -0.267 -4.142 -7.812 2.798 30 X_G15:C27_X X 15 ? X 27 ? 19 1 1 A G 16 1_555 A C 26 1_555 -0.483 -0.077 -0.484 -9.252 -10.951 6.304 31 X_G16:C26_X X 16 ? X 26 ? 19 1 1 A G 17 1_555 A C 25 1_555 0.045 -0.212 -0.303 -18.501 -9.327 -6.165 32 X_G17:C25_X X 17 ? X 25 ? 19 1 1 A U 18 1_555 A A 22 1_555 4.251 -2.363 0.632 2.946 18.508 -87.238 33 X_U18:A22_X X 18 ? X 22 ? 24 4 1 A G 19 1_555 B A 34 1_555 6.951 -4.757 0.158 25.004 33.104 0.050 34 X_G19:A90_Z X 19 ? Z 90 ? 11 10 1 A A 48 1_555 B U 5 1_555 -6.797 -3.104 -1.203 47.416 -37.898 8.519 35 X_A48:U61_Z X 48 ? Z 61 ? ? ? 1 A A 49 1_555 B U 4 1_555 -4.378 -0.532 1.128 18.049 -7.389 5.137 36 X_A49:U60_Z X 49 ? Z 60 ? ? ? 1 A U 50 1_555 B A 3 1_555 -0.664 0.324 0.078 17.145 -7.500 0.449 37 X_U50:A59_Z X 50 ? Z 59 ? 20 1 1 A C 51 1_555 B G 2 1_555 1.035 -0.004 -0.082 14.476 -16.109 6.330 38 X_C51:G58_Z X 51 ? Z 58 ? 19 1 1 A C 52 1_555 B GTP 1 1_555 1.079 -0.473 0.279 -3.201 -7.203 -14.199 39 X_C52:GTP57_Z X 52 ? Z 57 ? 19 1 1 B A 29 1_555 B G 42 1_555 -0.075 1.656 -0.143 3.382 -18.208 -17.687 40 Z_A85:G98_Z Z 85 ? Z 98 ? 8 1 1 B C 30 1_555 B G 41 1_555 0.067 -0.121 0.324 9.065 -25.611 1.795 41 Z_C86:G97_Z Z 86 ? Z 97 ? 19 1 1 B A 31 1_555 B U 40 1_555 -0.185 -0.153 -0.003 -13.909 -27.632 3.980 42 Z_A87:U96_Z Z 87 ? Z 96 ? 20 1 1 B G 32 1_555 B C 39 1_555 0.019 -0.001 0.179 -21.611 -17.944 -1.952 43 Z_G88:C95_Z Z 88 ? Z 95 ? 19 1 1 B U 33 1_555 B A 36 1_555 4.246 -2.130 -0.011 9.971 9.089 -95.083 44 Z_U89:A92_Z Z 89 ? Z 92 ? 24 4 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 B C 56 1_555 A G 2 1_555 B U 55 1_555 -0.244 -2.018 3.364 3.574 6.637 36.248 -4.047 0.851 2.926 10.528 -5.669 36.997 1 XX_GTP1G2:U111C112_ZZ X 1 ? Z 112 ? X 2 ? Z 111 ? 1 A G 2 1_555 B U 55 1_555 A A 3 1_555 B U 54 1_555 0.285 -1.376 3.926 4.821 11.325 38.724 -3.438 0.208 3.418 16.576 -7.057 40.561 2 XX_G2A3:U110U111_ZZ X 2 ? Z 111 ? X 3 ? Z 110 ? 1 A A 3 1_555 B U 54 1_555 A U 4 1_555 B A 53 1_555 0.131 -1.160 2.771 -3.089 9.047 29.001 -3.634 -0.738 2.288 17.477 5.967 30.503 3 XX_A3U4:A109U110_ZZ X 3 ? Z 110 ? X 4 ? Z 109 ? 1 A U 4 1_555 B A 53 1_555 A C 5 1_555 B G 52 1_555 0.378 -1.211 2.899 1.428 9.123 33.424 -3.215 -0.450 2.506 15.498 -2.426 34.641 4 XX_U4C5:G108A109_ZZ X 4 ? Z 109 ? X 5 ? Z 108 ? 1 A C 5 1_555 B G 52 1_555 A U 6 1_555 B A 51 1_555 -1.256 -1.436 3.207 0.162 8.422 30.022 -4.153 2.368 2.708 15.868 -0.305 31.155 5 XX_C5U6:A107G108_ZZ X 5 ? Z 108 ? X 6 ? Z 107 ? 1 A U 6 1_555 B A 51 1_555 A U 7 1_555 B A 50 1_555 -0.084 -1.434 3.194 -1.640 6.632 24.487 -5.018 -0.244 2.717 15.260 3.775 25.408 6 XX_U6U7:A106A107_ZZ X 6 ? Z 107 ? X 7 ? Z 106 ? 1 A U 7 1_555 B A 50 1_555 A C 8 1_555 B G 49 1_555 0.496 -1.571 3.520 -4.387 5.216 39.051 -2.951 -1.265 3.220 7.731 6.503 39.619 7 XX_U7C8:G105A106_ZZ X 7 ? Z 106 ? X 8 ? Z 105 ? 1 A C 8 1_555 B G 49 1_555 A G 9 1_555 B A 48 1_555 -2.263 -0.744 3.986 9.241 18.369 52.978 -1.959 2.979 3.186 19.770 -9.946 56.559 8 XX_C8G9:A104G105_ZZ X 8 ? Z 105 ? X 9 ? Z 104 ? 1 A G 10 1_555 A G 47 1_555 A G 33 1_555 A C 46 1_555 0.006 -3.852 -2.084 131.819 -94.878 38.677 -2.083 -0.193 1.428 -50.863 -70.666 163.413 9 XX_G10G33:C46G47_XX X 10 ? X 47 ? X 33 ? X 46 ? 1 A G 33 1_555 A C 46 1_555 A U 34 1_555 A A 45 1_555 -0.062 -2.097 3.432 0.334 6.488 37.268 -4.068 0.138 3.037 10.058 -0.517 37.810 10 XX_G33U34:A45C46_XX X 33 ? X 46 ? X 34 ? X 45 ? 1 A U 34 1_555 A A 45 1_555 A G 35 1_555 A C 44 1_555 -1.342 -1.829 3.532 -5.045 13.433 27.645 -5.972 1.543 2.588 26.009 9.768 31.083 11 XX_U34G35:C44A45_XX X 34 ? X 45 ? X 35 ? X 44 ? 1 A G 35 1_555 A C 44 1_555 A G 36 1_555 A C 43 1_555 0.751 -1.958 3.417 5.017 6.258 34.508 -4.150 -0.489 3.101 10.377 -8.319 35.400 12 XX_G35G36:C43C44_XX X 35 ? X 44 ? X 36 ? X 43 ? 1 A G 36 1_555 A C 43 1_555 A U 37 1_555 A A 40 1_555 -0.774 -1.263 2.581 13.133 -0.071 82.740 -0.946 0.826 2.460 -0.054 -9.880 83.590 13 XX_G36U37:A40C43_XX X 36 ? X 43 ? X 37 ? X 40 ? 1 A A 38 1_555 B G 14 1_555 B A 17 1_555 B U 13 1_555 -0.917 -0.537 2.800 -2.458 -0.690 -1.905 18.557 -48.204 0.851 14.404 -51.294 -3.186 14 XZ_A38A73:U69G70_ZZ X 38 ? Z 70 ? Z 73 ? Z 69 ? 1 B A 17 1_555 B U 13 1_555 B C 20 1_555 B G 12 1_555 2.756 -1.854 3.125 0.244 7.405 69.503 -1.865 -2.399 2.948 6.477 -0.213 69.847 15 ZZ_A73C76:G68U69_ZZ Z 73 ? Z 69 ? Z 76 ? Z 68 ? 1 B C 20 1_555 B G 12 1_555 B C 21 1_555 B G 11 1_555 -0.364 -1.592 3.360 -4.610 8.265 39.998 -3.158 0.024 3.008 11.882 6.628 41.058 16 ZZ_C76C77:G67G68_ZZ Z 76 ? Z 68 ? Z 77 ? Z 67 ? 1 B C 21 1_555 B G 11 1_555 B A 22 1_555 B U 10 1_555 -0.161 -1.739 3.152 -4.855 10.678 33.146 -4.304 -0.379 2.489 18.029 8.198 35.106 17 ZZ_C77A78:U66G67_ZZ Z 77 ? Z 67 ? Z 78 ? Z 66 ? 1 B A 22 1_555 B U 10 1_555 B A 23 1_555 B U 9 1_555 0.388 -1.657 3.380 7.727 9.428 32.056 -4.269 0.534 2.811 16.353 -13.403 34.238 18 ZZ_A78A79:U65U66_ZZ Z 78 ? Z 66 ? Z 79 ? Z 65 ? 1 B A 23 1_555 B U 9 1_555 B A 24 1_555 B U 8 1_555 0.620 -0.784 3.203 2.291 -0.813 28.193 -1.417 -0.742 3.263 -1.665 -4.693 28.296 19 ZZ_A79A80:U64U65_ZZ Z 79 ? Z 65 ? Z 80 ? Z 64 ? 1 B A 24 1_555 B U 8 1_555 B A 25 1_555 A U 42 1_555 -0.446 -2.588 3.590 6.661 10.105 28.016 -6.842 2.114 2.370 19.746 -13.016 30.470 20 ZZ_A80A81:U42U64_XZ Z 80 ? Z 64 ? Z 81 ? X 42 ? 1 B A 25 1_555 A U 42 1_555 B C 26 1_555 A G 41 1_555 1.175 -1.359 2.859 -0.990 1.885 36.945 -2.358 -1.966 2.758 2.971 1.561 37.004 21 ZZ_A81C82:G41U42_XX Z 81 ? X 42 ? Z 82 ? X 41 ? 1 B C 26 1_555 A G 41 1_555 B C 27 1_555 A G 32 1_555 -0.815 -1.846 3.568 -6.148 6.200 30.263 -4.634 0.283 3.235 11.576 11.479 31.469 22 ZZ_C82C83:G32G41_XX Z 82 ? X 41 ? Z 83 ? X 32 ? 1 B C 27 1_555 A G 32 1_555 B G 28 1_555 A C 31 1_555 0.310 0.084 2.707 3.323 6.204 30.091 -0.849 -0.043 2.688 11.748 -6.293 30.885 23 ZZ_C83G84:C31G32_XX Z 83 ? X 32 ? Z 84 ? X 31 ? 1 B G 28 1_555 A C 31 1_555 B G 37 1_555 A C 30 1_555 1.588 -1.854 3.286 -2.077 13.748 22.601 -7.073 -3.923 1.738 31.535 4.765 26.488 24 ZZ_G84G93:C30C31_XX Z 84 ? X 31 ? Z 93 ? X 30 ? 1 B G 37 1_555 A C 30 1_555 B U 38 1_555 A A 29 1_555 -0.533 -1.315 3.067 4.435 1.167 38.252 -2.126 1.315 2.950 1.773 -6.739 38.515 25 ZZ_G93U94:A29C30_XX Z 93 ? X 30 ? Z 94 ? X 29 ? 1 B U 38 1_555 A A 29 1_555 A A 14 1_555 A G 28 1_555 -2.616 -5.173 3.664 -0.969 6.002 27.754 -11.882 5.117 2.598 12.325 1.991 28.399 26 ZX_U94A14:G28A29_XX Z 94 ? X 29 ? X 14 ? X 28 ? 1 A A 14 1_555 A G 28 1_555 A G 15 1_555 A C 27 1_555 -0.111 -0.887 3.614 -2.106 5.922 58.516 -1.237 -0.006 3.520 6.039 2.148 58.823 27 XX_A14G15:C27G28_XX X 14 ? X 28 ? X 15 ? X 27 ? 1 A G 15 1_555 A C 27 1_555 A G 16 1_555 A C 26 1_555 1.109 -2.400 3.457 1.494 10.118 26.256 -7.149 -1.954 2.439 21.274 -3.141 28.145 28 XX_G15G16:C26C27_XX X 15 ? X 27 ? X 16 ? X 26 ? 1 A G 16 1_555 A C 26 1_555 A G 17 1_555 A C 25 1_555 -0.657 -2.047 3.405 0.031 8.061 40.239 -3.785 0.942 2.958 11.577 -0.045 41.006 29 XX_G16G17:C25C26_XX X 16 ? X 26 ? X 17 ? X 25 ? 1 A G 17 1_555 A C 25 1_555 A U 18 1_555 A A 22 1_555 -2.377 -1.497 3.034 0.935 2.852 71.937 -1.361 2.051 2.954 2.427 -0.796 71.991 30 XX_G17U18:A22C25_XX X 17 ? X 25 ? X 18 ? X 22 ? 1 A U 18 1_555 A A 22 1_555 A G 19 1_555 B A 34 1_555 1.568 -0.471 2.676 3.822 1.626 -0.210 -1.490 40.342 -1.122 -34.110 80.154 -4.159 31 XX_U18G19:A90A22_ZX X 18 ? X 22 ? X 19 ? Z 90 ? 1 A A 48 1_555 B U 5 1_555 A A 49 1_555 B U 4 1_555 0.540 -0.746 4.496 -39.089 22.392 55.104 -1.732 -2.359 3.127 20.816 36.339 70.038 32 XX_A48A49:U60U61_ZZ X 48 ? Z 61 ? X 49 ? Z 60 ? 1 A A 49 1_555 B U 4 1_555 A U 50 1_555 B A 3 1_555 -0.870 -1.185 3.275 1.230 4.114 43.630 -1.971 1.280 3.132 5.519 -1.651 43.830 33 XX_A49U50:A59U60_ZZ X 49 ? Z 60 ? X 50 ? Z 59 ? 1 A U 50 1_555 B A 3 1_555 A C 51 1_555 B G 2 1_555 0.172 -1.378 3.329 3.259 4.229 40.194 -2.461 0.115 3.177 6.121 -4.716 40.533 34 XX_U50C51:G58A59_ZZ X 50 ? Z 59 ? X 51 ? Z 58 ? 1 A C 51 1_555 B G 2 1_555 A C 52 1_555 B GTP 1 1_555 -0.943 -1.774 3.586 3.003 9.463 40.017 -3.573 1.674 3.032 13.577 -4.309 41.181 35 XX_C51C52:GTP57G58_ZZ X 51 ? Z 58 ? X 52 ? Z 57 ? 1 B A 29 1_555 B G 42 1_555 B C 30 1_555 B G 41 1_555 1.065 -1.197 3.116 -6.787 3.972 32.455 -2.677 -2.868 2.684 6.980 11.925 33.369 36 ZZ_A85C86:G97G98_ZZ Z 85 ? Z 98 ? Z 86 ? Z 97 ? 1 B C 30 1_555 B G 41 1_555 B A 31 1_555 B U 40 1_555 0.050 -1.552 3.687 1.048 15.623 35.713 -4.300 0.056 2.794 24.098 -1.616 38.892 37 ZZ_C86A87:U96G97_ZZ Z 86 ? Z 97 ? Z 87 ? Z 96 ? 1 B A 31 1_555 B U 40 1_555 B G 32 1_555 B C 39 1_555 0.033 -1.418 3.233 0.714 12.614 37.410 -3.479 0.029 2.638 19.015 -1.076 39.413 38 ZZ_A87G88:C95U96_ZZ Z 87 ? Z 96 ? Z 88 ? Z 95 ? 1 B G 32 1_555 B C 39 1_555 B U 33 1_555 B A 36 1_555 -1.084 -0.803 2.668 7.320 -1.963 78.730 -0.588 1.012 2.592 -1.545 -5.758 79.035 39 ZZ_G88U89:A92C95_ZZ Z 88 ? Z 95 ? Z 89 ? Z 92 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 'POTASSIUM ION' K 5 'FLAVIN MONONUCLEOTIDE' FMN 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3F2Q _pdbx_initial_refinement_model.details 'PDB ENTRY 3F2Q' #