HEADER SIGNALING PROTEIN 30-MAY-11 2YKT TITLE CRYSTAL STRUCTURE OF THE I-BAR DOMAIN OF IRSP53 (BAIAP2) IN COMPLEX TITLE 2 WITH AN EHEC DERIVED TIR PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN COMPND 3 2; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: I-BAR DOMAIN, RESIDUES 1-250; COMPND 6 SYNONYM: BAI-ASSOCIATED PROTEIN 2, BAI1-ASSOCIATED PROTEIN 2, PROTEIN COMPND 7 BAP2, FAS LIGAND-ASSOCIATED FACTOR 3, FLAF3, INSULIN RECEPTOR COMPND 8 SUBSTRATE P53/P58, IRS-58, IRSP53/58, INSULIN RECEPTOR SUBSTRATE COMPND 9 PROTEIN OF 53 KDA, IRSP53, INSULIN RECEPTOR SUBSTRATE P53; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: TRANSLOCATED INTIMIN RECEPTOR PROTEIN; COMPND 13 CHAIN: B; COMPND 14 FRAGMENT: RESIDUES 452-463; COMPND 15 SYNONYM: TRANSLOCATED INTIMIN RECEPTOR; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: C-TERMINAL AMIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SCS1; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQTEV; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157\:H7; SOURCE 12 ORGANISM_TAXID: 544404 KEYWDS SIGNALING PROTEIN, NPY MOTIF, BINDING POCKET EXPDTA X-RAY DIFFRACTION AUTHOR J.C.DE GROOT,K.SCHLUETER,Y.CARIUS,C.QUEDENAU,D.VINGADASSALOM,J.FAIX, AUTHOR 2 S.M.WEISS,J.REICHELT,C.STANDFUSS-GABISCH,C.F.LESSER,J.M.LEONG, AUTHOR 3 D.W.HEINZ,K.BUESSOW,T.E.B.STRADAL REVDAT 4 20-DEC-23 2YKT 1 REMARK LINK REVDAT 3 01-APR-15 2YKT 1 JRNL REVDAT 2 26-OCT-11 2YKT 1 JRNL REVDAT 1 07-SEP-11 2YKT 0 JRNL AUTH J.C.DE GROOT,K.SCHLUTER,Y.CARIUS,C.QUEDENAU,D.VINGADASSALOM, JRNL AUTH 2 J.FAIX,S.M.WEISS,J.REICHELT,C.STANDFUSS-GABISCH,C.F.LESSER, JRNL AUTH 3 J.M.LEONG,D.W.HEINZ,K.BUSSOW,T.E.B.STRADAL JRNL TITL STRUCTURAL BASIS FOR COMPLEX FORMATION BETWEEN HUMAN IRSP53 JRNL TITL 2 AND THE TRANSLOCATED INTIMIN RECEPTOR TIR OF JRNL TITL 3 ENTEROHEMORRHAGIC E. COLI. JRNL REF STRUCTURE V. 19 1294 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 21893288 JRNL DOI 10.1016/J.STR.2011.06.015 REMARK 2 REMARK 2 RESOLUTION. 2.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 9.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 895 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.11 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1208 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.53000 REMARK 3 B22 (A**2) : -3.19000 REMARK 3 B33 (A**2) : 2.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.235 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.168 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1978 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2657 ; 1.901 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 248 ; 6.042 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;40.105 ;25.248 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 393 ;19.397 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.169 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 284 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1479 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1198 ; 1.215 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1911 ; 2.131 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 780 ; 3.506 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 739 ; 5.757 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 234 REMARK 3 ORIGIN FOR THE GROUP (A): -14.2686 -20.8222 8.3271 REMARK 3 T TENSOR REMARK 3 T11: 0.0468 T22: 0.0762 REMARK 3 T33: 0.0484 T12: -0.0009 REMARK 3 T13: -0.0021 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 0.1545 L22: 1.4354 REMARK 3 L33: 0.5792 L12: 0.0844 REMARK 3 L13: 0.0639 L23: 0.7818 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: 0.0040 S13: -0.0059 REMARK 3 S21: -0.0010 S22: -0.0215 S23: 0.0138 REMARK 3 S31: -0.0143 S32: -0.0332 S33: 0.0125 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 452 B 463 REMARK 3 ORIGIN FOR THE GROUP (A): -15.2655 -33.4750 9.6503 REMARK 3 T TENSOR REMARK 3 T11: 0.2688 T22: 0.2581 REMARK 3 T33: 0.3048 T12: -0.0336 REMARK 3 T13: 0.0107 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.9221 L22: 2.0994 REMARK 3 L33: 4.5517 L12: 1.3310 REMARK 3 L13: -0.3109 L23: 0.1187 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.1410 S13: -0.4760 REMARK 3 S21: 0.0845 S22: 0.0571 S23: 0.0886 REMARK 3 S31: 0.2664 S32: 0.1707 S33: -0.0251 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2YKT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1290048459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : KMC-2 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.110 REMARK 200 RESOLUTION RANGE LOW (A) : 9.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.100 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1Y2O REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% (W/V) PEG 3350, 0.3M AMMONIUM REMARK 280 SULPHATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.40300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 18.40300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.17700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 93.68100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.17700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 93.68100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.40300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.17700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 93.68100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 18.40300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.17700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 93.68100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.80600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 THR A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 SER A 148 REMARK 465 GLN A 149 REMARK 465 GLY A 150 REMARK 465 SER A 151 REMARK 465 LYS A 152 REMARK 465 ASN A 153 REMARK 465 LYS A 235 REMARK 465 ILE A 236 REMARK 465 PRO A 237 REMARK 465 GLU A 238 REMARK 465 ARG A 239 REMARK 465 ALA A 240 REMARK 465 VAL A 241 REMARK 465 GLN A 242 REMARK 465 LEU A 243 REMARK 465 MET A 244 REMARK 465 GLN A 245 REMARK 465 GLN A 246 REMARK 465 VAL A 247 REMARK 465 ALA A 248 REMARK 465 SER A 249 REMARK 465 ASN A 250 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 SER A 234 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 101 -60.97 -123.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1235 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WDZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RCB DOMAIN OF IRSP53 REMARK 900 RELATED ID: 1Y2O RELATED DB: PDB REMARK 900 STRUCTURE OF N-TERMINAL DOMAIN IRSP53/BAIAP2 DBREF 2YKT A 1 250 UNP Q9UQB8 BAIP2_HUMAN 1 250 DBREF 2YKT B 452 463 UNP C6UYL8 C6UYL8_ECO5T 452 463 DBREF 2YKT B 464 464 PDB 2YKT 2YKT 464 464 SEQADV 2YKT GLY A -2 UNP Q9UQB8 EXPRESSION TAG SEQADV 2YKT SER A -1 UNP Q9UQB8 EXPRESSION TAG SEQADV 2YKT THR A 0 UNP Q9UQB8 EXPRESSION TAG SEQRES 1 A 253 GLY SER THR MET SER LEU SER ARG SER GLU GLU MET HIS SEQRES 2 A 253 ARG LEU THR GLU ASN VAL TYR LYS THR ILE MET GLU GLN SEQRES 3 A 253 PHE ASN PRO SER LEU ARG ASN PHE ILE ALA MET GLY LYS SEQRES 4 A 253 ASN TYR GLU LYS ALA LEU ALA GLY VAL THR TYR ALA ALA SEQRES 5 A 253 LYS GLY TYR PHE ASP ALA LEU VAL LYS MET GLY GLU LEU SEQRES 6 A 253 ALA SER GLU SER GLN GLY SER LYS GLU LEU GLY ASP VAL SEQRES 7 A 253 LEU PHE GLN MET ALA GLU VAL HIS ARG GLN ILE GLN ASN SEQRES 8 A 253 GLN LEU GLU GLU MET LEU LYS SER PHE HIS ASN GLU LEU SEQRES 9 A 253 LEU THR GLN LEU GLU GLN LYS VAL GLU LEU ASP SER ARG SEQRES 10 A 253 TYR LEU SER ALA ALA LEU LYS LYS TYR GLN THR GLU GLN SEQRES 11 A 253 ARG SER LYS GLY ASP ALA LEU ASP LYS CYS GLN ALA GLU SEQRES 12 A 253 LEU LYS LYS LEU ARG LYS LYS SER GLN GLY SER LYS ASN SEQRES 13 A 253 PRO GLN LYS TYR SER ASP LYS GLU LEU GLN TYR ILE ASP SEQRES 14 A 253 ALA ILE SER ASN LYS GLN GLY GLU LEU GLU ASN TYR VAL SEQRES 15 A 253 SER ASP GLY TYR LYS THR ALA LEU THR GLU GLU ARG ARG SEQRES 16 A 253 ARG PHE CYS PHE LEU VAL GLU LYS GLN CYS ALA VAL ALA SEQRES 17 A 253 LYS ASN SER ALA ALA TYR HIS SER LYS GLY LYS GLU LEU SEQRES 18 A 253 LEU ALA GLN LYS LEU PRO LEU TRP GLN GLN ALA CYS ALA SEQRES 19 A 253 ASP PRO SER LYS ILE PRO GLU ARG ALA VAL GLN LEU MET SEQRES 20 A 253 GLN GLN VAL ALA SER ASN SEQRES 1 B 13 GLY THR VAL GLN ASN PRO TYR ALA ASP VAL LYS THR NH2 HET NH2 B 464 1 HET SO4 A1235 5 HETNAM NH2 AMINO GROUP HETNAM SO4 SULFATE ION FORMUL 2 NH2 H2 N FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *46(H2 O) HELIX 1 1 ARG A 5 GLU A 65 1 61 HELIX 2 2 LYS A 70 LYS A 146 1 77 HELIX 3 3 ASP A 159 ALA A 229 1 71 SSBOND 1 CYS A 195 CYS A 230 1555 4556 2.77 LINK C THR B 463 N NH2 B 464 1555 1555 1.39 SITE 1 AC1 3 HIS A 10 LYS A 121 ARG A 128 CRYST1 88.354 187.362 36.806 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011318 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005337 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027169 0.00000