data_2YKZ # _entry.id 2YKZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YKZ pdb_00002ykz 10.2210/pdb2ykz/pdb PDBE EBI-48485 ? ? WWPDB D_1290048485 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-05 2 'Structure model' 2 0 2020-03-11 3 'Structure model' 2 1 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' Other 4 2 'Structure model' 'Polymer sequence' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' entity_poly 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_struct_special_symmetry 6 2 'Structure model' struct_conn 7 3 'Structure model' chem_comp_atom 8 3 'Structure model' chem_comp_bond 9 3 'Structure model' database_2 10 3 'Structure model' pdbx_entry_details 11 3 'Structure model' pdbx_modification_feature 12 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 6 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 7 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 8 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 9 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 10 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 11 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 12 2 'Structure model' '_pdbx_database_status.status_code_sf' 13 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 3 'Structure model' '_database_2.pdbx_DOI' 15 3 'Structure model' '_database_2.pdbx_database_accession' 16 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 17 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 18 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YKZ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-05-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2XLH unspecified ;REDUCED STRUCTURE OF R124A MUTANT OF CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS ; PDB 2XM0 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124K VARIANT' PDB 1CGO unspecified ;CYTOCHROME C' ; PDB 2XM4 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124E VARIANT' PDB 1E86 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE WITH CO BOUND TO DISTAL SIDE OF HEME ; PDB 2XL6 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124A VARIANT WITH BOUND NO' PDB 1CGN unspecified ;CYTOCHROME C' ; PDB 1E85 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE WITH NO BOUND TO PROXIMAL SIDE OF HEME ; PDB 2XLM unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS RECOMBINANT NATIVE WITH BOUND NO' PDB 2XLD unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124Q VARIANT' PDB 2XLE unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124K VARIANT WITH BOUND NO' PDB 1E83 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - OXIDIZED STRUCTURE ; PDB 2XLW unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124Q VARIANT WITH BOUND NO' PDB 2XL8 unspecified ;REDUCED STRUCTURE OF R124F MUTANT OF CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS ; PDB 1E84 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE ; PDB 2XLV unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124F VARIANT WITH BOUND NO' PDB 2YL1 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND L16A VARIANT AT 1.03 A RESOLUTION' PDB 2YL0 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: AS ISOLATED L16A VARIANT AT 0.95 A RESOLUTION' PDB 2XLO unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124E VARIANT WITH BOUND NO' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Antonyuk, S.V.' 1 'Eady, R.R.' 2 'Hasnain, S.S.' 3 # _citation.id primary _citation.title 'Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 15780 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21900609 _citation.pdbx_database_id_DOI 10.1073/PNAS.1109051108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Antonyuk, S.V.' 1 ? primary 'Rustage, N.' 2 ? primary 'Petersen, C.A.' 3 ? primary 'Arnst, J.L.' 4 ? primary 'Heyes, D.J.' 5 ? primary 'Sharma, R.' 6 ? primary 'Berry, N.G.' 7 ? primary 'Scrutton, N.S.' 8 ? primary 'Eady, R.R.' 9 ? primary 'Andrew, C.R.' 10 ? primary 'Hasnain, S.S.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;CYTOCHROME C' ; 13659.495 1 ? ? ? ? 2 non-polymer syn 'HEME C' 618.503 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 374 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CYTOCHROME C PRIME' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(PCA)FAKPEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAVQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDA ASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASCKACHDAYRKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;QFAKPEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAVQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDAASFK QKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASCKACHDAYRKKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 PHE n 1 3 ALA n 1 4 LYS n 1 5 PRO n 1 6 GLU n 1 7 ASP n 1 8 ALA n 1 9 VAL n 1 10 LYS n 1 11 TYR n 1 12 ARG n 1 13 GLN n 1 14 SER n 1 15 ALA n 1 16 LEU n 1 17 THR n 1 18 LEU n 1 19 MET n 1 20 ALA n 1 21 SER n 1 22 HIS n 1 23 PHE n 1 24 GLY n 1 25 ARG n 1 26 MET n 1 27 THR n 1 28 PRO n 1 29 VAL n 1 30 VAL n 1 31 LYS n 1 32 GLY n 1 33 GLN n 1 34 ALA n 1 35 PRO n 1 36 TYR n 1 37 ASP n 1 38 ALA n 1 39 VAL n 1 40 GLN n 1 41 ILE n 1 42 LYS n 1 43 ALA n 1 44 ASN n 1 45 VAL n 1 46 GLU n 1 47 VAL n 1 48 LEU n 1 49 LYS n 1 50 THR n 1 51 LEU n 1 52 SER n 1 53 ALA n 1 54 LEU n 1 55 PRO n 1 56 TRP n 1 57 ALA n 1 58 ALA n 1 59 PHE n 1 60 GLY n 1 61 PRO n 1 62 GLY n 1 63 THR n 1 64 GLU n 1 65 GLY n 1 66 GLY n 1 67 ASP n 1 68 ALA n 1 69 ARG n 1 70 PRO n 1 71 GLU n 1 72 ILE n 1 73 TRP n 1 74 SER n 1 75 ASP n 1 76 ALA n 1 77 ALA n 1 78 SER n 1 79 PHE n 1 80 LYS n 1 81 GLN n 1 82 LYS n 1 83 GLN n 1 84 GLN n 1 85 ALA n 1 86 PHE n 1 87 GLN n 1 88 ASP n 1 89 ASN n 1 90 ILE n 1 91 VAL n 1 92 LYS n 1 93 LEU n 1 94 SER n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 ASP n 1 99 ALA n 1 100 GLY n 1 101 ASP n 1 102 LEU n 1 103 ASP n 1 104 LYS n 1 105 LEU n 1 106 ARG n 1 107 ALA n 1 108 ALA n 1 109 PHE n 1 110 GLY n 1 111 ASP n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 SER n 1 116 CYS n 1 117 LYS n 1 118 ALA n 1 119 CYS n 1 120 HIS n 1 121 ASP n 1 122 ALA n 1 123 TYR n 1 124 ARG n 1 125 LYS n 1 126 LYS n 1 127 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ACHROMOBACTER XYLOSOXIDANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85698 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PEC86 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PCA A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 LYS 127 127 127 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC 1 128 128 HEC HEC A . C 3 SO4 1 129 129 SO4 SO4 A . D 3 SO4 1 130 130 SO4 SO4 A . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2014 2014 HOH HOH A . E 4 HOH 14 2015 2015 HOH HOH A . E 4 HOH 15 2017 2017 HOH HOH A . E 4 HOH 16 2018 2018 HOH HOH A . E 4 HOH 17 2019 2019 HOH HOH A . E 4 HOH 18 2020 2020 HOH HOH A . E 4 HOH 19 2021 2021 HOH HOH A . E 4 HOH 20 2022 2022 HOH HOH A . E 4 HOH 21 2023 2023 HOH HOH A . E 4 HOH 22 2024 2024 HOH HOH A . E 4 HOH 23 2025 2025 HOH HOH A . E 4 HOH 24 2026 2026 HOH HOH A . E 4 HOH 25 2027 2027 HOH HOH A . E 4 HOH 26 2028 2028 HOH HOH A . E 4 HOH 27 2029 2029 HOH HOH A . E 4 HOH 28 2030 2030 HOH HOH A . E 4 HOH 29 2031 2031 HOH HOH A . E 4 HOH 30 2033 2033 HOH HOH A . E 4 HOH 31 2034 2034 HOH HOH A . E 4 HOH 32 2036 2036 HOH HOH A . E 4 HOH 33 2037 2037 HOH HOH A . E 4 HOH 34 2038 2038 HOH HOH A . E 4 HOH 35 2039 2039 HOH HOH A . E 4 HOH 36 2040 2040 HOH HOH A . E 4 HOH 37 2041 2041 HOH HOH A . E 4 HOH 38 2042 2042 HOH HOH A . E 4 HOH 39 2043 2043 HOH HOH A . E 4 HOH 40 2044 2044 HOH HOH A . E 4 HOH 41 2046 2046 HOH HOH A . E 4 HOH 42 2047 2047 HOH HOH A . E 4 HOH 43 2048 2048 HOH HOH A . E 4 HOH 44 2049 2049 HOH HOH A . E 4 HOH 45 2051 2051 HOH HOH A . E 4 HOH 46 2052 2052 HOH HOH A . E 4 HOH 47 2053 2053 HOH HOH A . E 4 HOH 48 2054 2054 HOH HOH A . E 4 HOH 49 2055 2055 HOH HOH A . E 4 HOH 50 2056 2056 HOH HOH A . E 4 HOH 51 2057 2057 HOH HOH A . E 4 HOH 52 2058 2058 HOH HOH A . E 4 HOH 53 2059 2059 HOH HOH A . E 4 HOH 54 2060 2060 HOH HOH A . E 4 HOH 55 2061 2061 HOH HOH A . E 4 HOH 56 2063 2063 HOH HOH A . E 4 HOH 57 2064 2064 HOH HOH A . E 4 HOH 58 2065 2065 HOH HOH A . E 4 HOH 59 2066 2066 HOH HOH A . E 4 HOH 60 2067 2067 HOH HOH A . E 4 HOH 61 2068 2068 HOH HOH A . E 4 HOH 62 2069 2069 HOH HOH A . E 4 HOH 63 2070 2070 HOH HOH A . E 4 HOH 64 2071 2071 HOH HOH A . E 4 HOH 65 2072 2072 HOH HOH A . E 4 HOH 66 2073 2073 HOH HOH A . E 4 HOH 67 2074 2074 HOH HOH A . E 4 HOH 68 2075 2075 HOH HOH A . E 4 HOH 69 2076 2076 HOH HOH A . E 4 HOH 70 2077 2077 HOH HOH A . E 4 HOH 71 2078 2078 HOH HOH A . E 4 HOH 72 2079 2079 HOH HOH A . E 4 HOH 73 2080 2080 HOH HOH A . E 4 HOH 74 2081 2081 HOH HOH A . E 4 HOH 75 2082 2082 HOH HOH A . E 4 HOH 76 2083 2083 HOH HOH A . E 4 HOH 77 2084 2084 HOH HOH A . E 4 HOH 78 2086 2086 HOH HOH A . E 4 HOH 79 2087 2087 HOH HOH A . E 4 HOH 80 2088 2088 HOH HOH A . E 4 HOH 81 2089 2089 HOH HOH A . E 4 HOH 82 2090 2090 HOH HOH A . E 4 HOH 83 2091 2091 HOH HOH A . E 4 HOH 84 2092 2092 HOH HOH A . E 4 HOH 85 2093 2093 HOH HOH A . E 4 HOH 86 2094 2094 HOH HOH A . E 4 HOH 87 2095 2095 HOH HOH A . E 4 HOH 88 2096 2096 HOH HOH A . E 4 HOH 89 2097 2097 HOH HOH A . E 4 HOH 90 2098 2098 HOH HOH A . E 4 HOH 91 2099 2099 HOH HOH A . E 4 HOH 92 2100 2100 HOH HOH A . E 4 HOH 93 2101 2101 HOH HOH A . E 4 HOH 94 2102 2102 HOH HOH A . E 4 HOH 95 2103 2103 HOH HOH A . E 4 HOH 96 2104 2104 HOH HOH A . E 4 HOH 97 2105 2105 HOH HOH A . E 4 HOH 98 2106 2106 HOH HOH A . E 4 HOH 99 2108 2108 HOH HOH A . E 4 HOH 100 2109 2109 HOH HOH A . E 4 HOH 101 2110 2110 HOH HOH A . E 4 HOH 102 2111 2111 HOH HOH A . E 4 HOH 103 2112 2112 HOH HOH A . E 4 HOH 104 2113 2113 HOH HOH A . E 4 HOH 105 2114 2114 HOH HOH A . E 4 HOH 106 2115 2115 HOH HOH A . E 4 HOH 107 2117 2117 HOH HOH A . E 4 HOH 108 2118 2118 HOH HOH A . E 4 HOH 109 2120 2120 HOH HOH A . E 4 HOH 110 2121 2121 HOH HOH A . E 4 HOH 111 2122 2122 HOH HOH A . E 4 HOH 112 2123 2123 HOH HOH A . E 4 HOH 113 2124 2124 HOH HOH A . E 4 HOH 114 2126 2126 HOH HOH A . E 4 HOH 115 2127 2127 HOH HOH A . E 4 HOH 116 2128 2128 HOH HOH A . E 4 HOH 117 2129 2129 HOH HOH A . E 4 HOH 118 2130 2130 HOH HOH A . E 4 HOH 119 2131 2131 HOH HOH A . E 4 HOH 120 2132 2132 HOH HOH A . E 4 HOH 121 2133 2133 HOH HOH A . E 4 HOH 122 2134 2134 HOH HOH A . E 4 HOH 123 2135 2135 HOH HOH A . E 4 HOH 124 2136 2136 HOH HOH A . E 4 HOH 125 2137 2137 HOH HOH A . E 4 HOH 126 2138 2138 HOH HOH A . E 4 HOH 127 2139 2139 HOH HOH A . E 4 HOH 128 2140 2140 HOH HOH A . E 4 HOH 129 2141 2141 HOH HOH A . E 4 HOH 130 2142 2142 HOH HOH A . E 4 HOH 131 2143 2143 HOH HOH A . E 4 HOH 132 2144 2144 HOH HOH A . E 4 HOH 133 2145 2145 HOH HOH A . E 4 HOH 134 2147 2147 HOH HOH A . E 4 HOH 135 2148 2148 HOH HOH A . E 4 HOH 136 2149 2149 HOH HOH A . E 4 HOH 137 2151 2151 HOH HOH A . E 4 HOH 138 2152 2152 HOH HOH A . E 4 HOH 139 2153 2153 HOH HOH A . E 4 HOH 140 2154 2154 HOH HOH A . E 4 HOH 141 2155 2155 HOH HOH A . E 4 HOH 142 2157 2157 HOH HOH A . E 4 HOH 143 2158 2158 HOH HOH A . E 4 HOH 144 2159 2159 HOH HOH A . E 4 HOH 145 2160 2160 HOH HOH A . E 4 HOH 146 2161 2161 HOH HOH A . E 4 HOH 147 2162 2162 HOH HOH A . E 4 HOH 148 2163 2163 HOH HOH A . E 4 HOH 149 2164 2164 HOH HOH A . E 4 HOH 150 2165 2165 HOH HOH A . E 4 HOH 151 2167 2167 HOH HOH A . E 4 HOH 152 2168 2168 HOH HOH A . E 4 HOH 153 2169 2169 HOH HOH A . E 4 HOH 154 2170 2170 HOH HOH A . E 4 HOH 155 2171 2171 HOH HOH A . E 4 HOH 156 2172 2172 HOH HOH A . E 4 HOH 157 2173 2173 HOH HOH A . E 4 HOH 158 2174 2174 HOH HOH A . E 4 HOH 159 2175 2175 HOH HOH A . E 4 HOH 160 2176 2176 HOH HOH A . E 4 HOH 161 2177 2177 HOH HOH A . E 4 HOH 162 2178 2178 HOH HOH A . E 4 HOH 163 2179 2179 HOH HOH A . E 4 HOH 164 2180 2180 HOH HOH A . E 4 HOH 165 2181 2181 HOH HOH A . E 4 HOH 166 2182 2182 HOH HOH A . E 4 HOH 167 2183 2183 HOH HOH A . E 4 HOH 168 2184 2184 HOH HOH A . E 4 HOH 169 2185 2185 HOH HOH A . E 4 HOH 170 2186 2186 HOH HOH A . E 4 HOH 171 2187 2187 HOH HOH A . E 4 HOH 172 2189 2189 HOH HOH A . E 4 HOH 173 2190 2190 HOH HOH A . E 4 HOH 174 2191 2191 HOH HOH A . E 4 HOH 175 2194 2194 HOH HOH A . E 4 HOH 176 2195 2195 HOH HOH A . E 4 HOH 177 2196 2196 HOH HOH A . E 4 HOH 178 2197 2197 HOH HOH A . E 4 HOH 179 2198 2198 HOH HOH A . E 4 HOH 180 2199 2199 HOH HOH A . E 4 HOH 181 2200 2200 HOH HOH A . E 4 HOH 182 2202 2202 HOH HOH A . E 4 HOH 183 2203 2203 HOH HOH A . E 4 HOH 184 2205 2205 HOH HOH A . E 4 HOH 185 2206 2206 HOH HOH A . E 4 HOH 186 2207 2207 HOH HOH A . E 4 HOH 187 2210 2210 HOH HOH A . E 4 HOH 188 2208 2208 HOH HOH A . E 4 HOH 189 2211 2211 HOH HOH A . E 4 HOH 190 2212 2212 HOH HOH A . E 4 HOH 191 2214 2214 HOH HOH A . E 4 HOH 192 2215 2215 HOH HOH A . E 4 HOH 193 2216 2216 HOH HOH A . E 4 HOH 194 2217 2217 HOH HOH A . E 4 HOH 195 2218 2218 HOH HOH A . E 4 HOH 196 2219 2219 HOH HOH A . E 4 HOH 197 2221 2221 HOH HOH A . E 4 HOH 198 2223 2223 HOH HOH A . E 4 HOH 199 2224 2224 HOH HOH A . E 4 HOH 200 2225 2225 HOH HOH A . E 4 HOH 201 2226 2226 HOH HOH A . E 4 HOH 202 2227 2227 HOH HOH A . E 4 HOH 203 2229 2229 HOH HOH A . E 4 HOH 204 2230 2230 HOH HOH A . E 4 HOH 205 2231 2231 HOH HOH A . E 4 HOH 206 2232 2232 HOH HOH A . E 4 HOH 207 2233 2233 HOH HOH A . E 4 HOH 208 2235 2235 HOH HOH A . E 4 HOH 209 2236 2236 HOH HOH A . E 4 HOH 210 2237 2237 HOH HOH A . E 4 HOH 211 2238 2238 HOH HOH A . E 4 HOH 212 2239 2239 HOH HOH A . E 4 HOH 213 2240 2240 HOH HOH A . E 4 HOH 214 2241 2241 HOH HOH A . E 4 HOH 215 2242 2242 HOH HOH A . E 4 HOH 216 2244 2244 HOH HOH A . E 4 HOH 217 2245 2245 HOH HOH A . E 4 HOH 218 2246 2246 HOH HOH A . E 4 HOH 219 2247 2247 HOH HOH A . E 4 HOH 220 2248 2248 HOH HOH A . E 4 HOH 221 2249 2249 HOH HOH A . E 4 HOH 222 2252 2252 HOH HOH A . E 4 HOH 223 2254 2254 HOH HOH A . E 4 HOH 224 2255 2255 HOH HOH A . E 4 HOH 225 2256 2256 HOH HOH A . E 4 HOH 226 2257 2257 HOH HOH A . E 4 HOH 227 2258 2258 HOH HOH A . E 4 HOH 228 2259 2259 HOH HOH A . E 4 HOH 229 2260 2260 HOH HOH A . E 4 HOH 230 2261 2261 HOH HOH A . E 4 HOH 231 2262 2262 HOH HOH A . E 4 HOH 232 2263 2263 HOH HOH A . E 4 HOH 233 2264 2264 HOH HOH A . E 4 HOH 234 2265 2265 HOH HOH A . E 4 HOH 235 2267 2267 HOH HOH A . E 4 HOH 236 2268 2268 HOH HOH A . E 4 HOH 237 2269 2269 HOH HOH A . E 4 HOH 238 2270 2270 HOH HOH A . E 4 HOH 239 2271 2271 HOH HOH A . E 4 HOH 240 2273 2273 HOH HOH A . E 4 HOH 241 2274 2274 HOH HOH A . E 4 HOH 242 2275 2275 HOH HOH A . E 4 HOH 243 2276 2276 HOH HOH A . E 4 HOH 244 2278 2278 HOH HOH A . E 4 HOH 245 2279 2279 HOH HOH A . E 4 HOH 246 2280 2280 HOH HOH A . E 4 HOH 247 2281 2281 HOH HOH A . E 4 HOH 248 2282 2282 HOH HOH A . E 4 HOH 249 2283 2283 HOH HOH A . E 4 HOH 250 2284 2284 HOH HOH A . E 4 HOH 251 2285 2285 HOH HOH A . E 4 HOH 252 2287 2287 HOH HOH A . E 4 HOH 253 2288 2288 HOH HOH A . E 4 HOH 254 2289 2289 HOH HOH A . E 4 HOH 255 2290 2290 HOH HOH A . E 4 HOH 256 2291 2291 HOH HOH A . E 4 HOH 257 2293 2293 HOH HOH A . E 4 HOH 258 2294 2294 HOH HOH A . E 4 HOH 259 2295 2295 HOH HOH A . E 4 HOH 260 2296 2296 HOH HOH A . E 4 HOH 261 2297 2297 HOH HOH A . E 4 HOH 262 2298 2298 HOH HOH A . E 4 HOH 263 2299 2299 HOH HOH A . E 4 HOH 264 2301 2301 HOH HOH A . E 4 HOH 265 2302 2302 HOH HOH A . E 4 HOH 266 2303 2303 HOH HOH A . E 4 HOH 267 2305 2305 HOH HOH A . E 4 HOH 268 2306 2306 HOH HOH A . E 4 HOH 269 2307 2307 HOH HOH A . E 4 HOH 270 2308 2308 HOH HOH A . E 4 HOH 271 2309 2309 HOH HOH A . E 4 HOH 272 2310 2310 HOH HOH A . E 4 HOH 273 2311 2311 HOH HOH A . E 4 HOH 274 2312 2312 HOH HOH A . E 4 HOH 275 2313 2313 HOH HOH A . E 4 HOH 276 2314 2314 HOH HOH A . E 4 HOH 277 2315 2315 HOH HOH A . E 4 HOH 278 2316 2316 HOH HOH A . E 4 HOH 279 2317 2317 HOH HOH A . E 4 HOH 280 2318 2318 HOH HOH A . E 4 HOH 281 2319 2319 HOH HOH A . E 4 HOH 282 2320 2320 HOH HOH A . E 4 HOH 283 2321 2321 HOH HOH A . E 4 HOH 284 2322 2322 HOH HOH A . E 4 HOH 285 2323 2323 HOH HOH A . E 4 HOH 286 2324 2324 HOH HOH A . E 4 HOH 287 2326 2326 HOH HOH A . E 4 HOH 288 2327 2327 HOH HOH A . E 4 HOH 289 2328 2328 HOH HOH A . E 4 HOH 290 2329 2329 HOH HOH A . E 4 HOH 291 2330 2330 HOH HOH A . E 4 HOH 292 2331 2331 HOH HOH A . E 4 HOH 293 2333 2333 HOH HOH A . E 4 HOH 294 2334 2334 HOH HOH A . E 4 HOH 295 2335 2335 HOH HOH A . E 4 HOH 296 2336 2336 HOH HOH A . E 4 HOH 297 2337 2337 HOH HOH A . E 4 HOH 298 2338 2338 HOH HOH A . E 4 HOH 299 2339 2339 HOH HOH A . E 4 HOH 300 2340 2340 HOH HOH A . E 4 HOH 301 2342 2342 HOH HOH A . E 4 HOH 302 2343 2343 HOH HOH A . E 4 HOH 303 2344 2344 HOH HOH A . E 4 HOH 304 2345 2345 HOH HOH A . E 4 HOH 305 2347 2347 HOH HOH A . E 4 HOH 306 2348 2348 HOH HOH A . E 4 HOH 307 2349 2349 HOH HOH A . E 4 HOH 308 2350 2350 HOH HOH A . E 4 HOH 309 2351 2351 HOH HOH A . E 4 HOH 310 2352 2352 HOH HOH A . E 4 HOH 311 2353 2353 HOH HOH A . E 4 HOH 312 2354 2354 HOH HOH A . E 4 HOH 313 2355 2355 HOH HOH A . E 4 HOH 314 2356 2356 HOH HOH A . E 4 HOH 315 2357 2357 HOH HOH A . E 4 HOH 316 2358 2358 HOH HOH A . E 4 HOH 317 2359 2359 HOH HOH A . E 4 HOH 318 2360 2360 HOH HOH A . E 4 HOH 319 2362 2362 HOH HOH A . E 4 HOH 320 2363 2363 HOH HOH A . E 4 HOH 321 2364 2364 HOH HOH A . E 4 HOH 322 2365 2365 HOH HOH A . E 4 HOH 323 2367 2367 HOH HOH A . E 4 HOH 324 2368 2368 HOH HOH A . E 4 HOH 325 2369 2369 HOH HOH A . E 4 HOH 326 2370 2370 HOH HOH A . E 4 HOH 327 2372 2372 HOH HOH A . E 4 HOH 328 2373 2373 HOH HOH A . E 4 HOH 329 2374 2374 HOH HOH A . E 4 HOH 330 2376 2376 HOH HOH A . E 4 HOH 331 2378 2378 HOH HOH A . E 4 HOH 332 2379 2379 HOH HOH A . E 4 HOH 333 2381 2381 HOH HOH A . E 4 HOH 334 2383 2383 HOH HOH A . E 4 HOH 335 2384 2384 HOH HOH A . E 4 HOH 336 2385 2385 HOH HOH A . E 4 HOH 337 2386 2386 HOH HOH A . E 4 HOH 338 2387 2387 HOH HOH A . E 4 HOH 339 2388 2388 HOH HOH A . E 4 HOH 340 2389 2389 HOH HOH A . E 4 HOH 341 2390 2390 HOH HOH A . E 4 HOH 342 2391 2391 HOH HOH A . E 4 HOH 343 2392 2392 HOH HOH A . E 4 HOH 344 2393 2393 HOH HOH A . E 4 HOH 345 2394 2394 HOH HOH A . E 4 HOH 346 2395 2395 HOH HOH A . E 4 HOH 347 2397 2397 HOH HOH A . E 4 HOH 348 2399 2399 HOH HOH A . E 4 HOH 349 2400 2400 HOH HOH A . E 4 HOH 350 2401 2401 HOH HOH A . E 4 HOH 351 2403 2403 HOH HOH A . E 4 HOH 352 2404 2404 HOH HOH A . E 4 HOH 353 2405 2405 HOH HOH A . E 4 HOH 354 2406 2406 HOH HOH A . E 4 HOH 355 2407 2407 HOH HOH A . E 4 HOH 356 2408 2408 HOH HOH A . E 4 HOH 357 2409 2409 HOH HOH A . E 4 HOH 358 2410 2410 HOH HOH A . E 4 HOH 359 2411 2411 HOH HOH A . E 4 HOH 360 2413 2413 HOH HOH A . E 4 HOH 361 2414 2414 HOH HOH A . E 4 HOH 362 2415 2415 HOH HOH A . E 4 HOH 363 2417 2417 HOH HOH A . E 4 HOH 364 2419 2419 HOH HOH A . E 4 HOH 365 2420 2420 HOH HOH A . E 4 HOH 366 2421 2421 HOH HOH A . E 4 HOH 367 2422 2422 HOH HOH A . E 4 HOH 368 2423 2423 HOH HOH A . E 4 HOH 369 2425 2425 HOH HOH A . E 4 HOH 370 2426 2426 HOH HOH A . E 4 HOH 371 2427 2427 HOH HOH A . E 4 HOH 372 2429 2429 HOH HOH A . E 4 HOH 373 2430 2430 HOH HOH A . E 4 HOH 374 2431 2431 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 127 ? CA ? A LYS 127 CA 2 1 Y 1 A LYS 127 ? C ? A LYS 127 C 3 1 Y 1 A LYS 127 ? O ? A LYS 127 O 4 1 Y 1 A LYS 127 ? CB ? A LYS 127 CB 5 1 Y 1 A LYS 127 ? CG ? A LYS 127 CG 6 1 Y 1 A LYS 127 ? CD ? A LYS 127 CD 7 1 Y 1 A LYS 127 ? CE ? A LYS 127 CE 8 1 Y 1 A LYS 127 ? NZ ? A LYS 127 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0106 ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 # _cell.entry_id 2YKZ _cell.length_a 53.470 _cell.length_b 53.470 _cell.length_c 181.190 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YKZ _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # _exptl.entry_id 2YKZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.19 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'AMMONIUM SULPHATE, TRIS PH 7.5 .' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2008-04-07 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.79 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 0.79 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YKZ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.00 _reflns.d_resolution_high 0.84 _reflns.number_obs 128930 _reflns.number_all ? _reflns.percent_possible_obs 92.2 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.50 _reflns.B_iso_Wilson_estimate 10.1 _reflns.pdbx_redundancy 6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 0.84 _reflns_shell.d_res_low 0.90 _reflns_shell.percent_possible_all 72.8 _reflns_shell.Rmerge_I_obs 0.78 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.12 _reflns_shell.pdbx_redundancy 5.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YKZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 123627 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.51 _refine.ls_d_res_high 0.84 _refine.ls_percent_reflns_obs 92.2 _refine.ls_R_factor_obs 0.10615 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.10574 _refine.ls_R_factor_R_free 0.11602 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.0 _refine.ls_number_reflns_R_free 5151 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.985 _refine.correlation_coeff_Fo_to_Fc_free 0.984 _refine.B_iso_mean 10.3 _refine.aniso_B[1][1] -0.16 _refine.aniso_B[2][2] -0.16 _refine.aniso_B[3][3] 0.23 _refine.aniso_B[1][2] -0.08 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.011 _refine.pdbx_overall_ESU_R_Free 0.011 _refine.overall_SU_ML 0.006 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.231 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 952 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 374 _refine_hist.number_atoms_total 1379 _refine_hist.d_res_high 0.84 _refine_hist.d_res_low 19.51 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 1266 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 713 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.038 2.081 ? 1766 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.937 3.000 ? 1639 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.189 5.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.942 24.528 ? 53 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.595 15.000 ? 218 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 26.413 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.108 0.200 ? 175 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.015 0.021 ? 1453 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.005 0.020 ? 221 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.562 1.500 ? 770 'X-RAY DIFFRACTION' ? r_mcbond_other 0.429 1.500 ? 208 'X-RAY DIFFRACTION' ? r_mcangle_it 2.307 2.000 ? 1251 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.197 3.000 ? 496 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.135 4.500 ? 493 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.324 3.000 ? 1979 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 0.840 _refine_ls_shell.d_res_low 0.862 _refine_ls_shell.number_reflns_R_work 5769 _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.percent_reflns_obs 70.0 _refine_ls_shell.R_factor_R_free 0.250 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 240 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2YKZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YKZ _struct.title 'RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS AT 0.84 A RESOLUTION: RESTRAINED REFINEMENT' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YKZ _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, HAEMOPROTEIN, 4-HELIX BUNDLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYCP_ALCXX _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P00138 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YKZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00138 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 127 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 127 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2YKZ _struct_ref_seq_dif.mon_id VAL _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 39 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00138 _struct_ref_seq_dif.db_mon_id ALA _struct_ref_seq_dif.pdbx_seq_db_seq_num 39 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 39 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4230 ? 1 MORE -92.7 ? 1 'SSA (A^2)' 13060 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 26.7350000000 -0.8660254038 -0.5000000000 0.0000000000 46.3063783404 0.0000000000 0.0000000000 -1.0000000000 30.1983333333 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 4 ? ARG A 25 ? LYS A 4 ARG A 25 1 ? 22 HELX_P HELX_P2 2 MET A 26 ? LYS A 31 ? MET A 26 LYS A 31 1 ? 6 HELX_P HELX_P3 3 ASP A 37 ? ALA A 53 ? ASP A 37 ALA A 53 1 ? 17 HELX_P HELX_P4 4 PRO A 55 ? PHE A 59 ? PRO A 55 PHE A 59 5 ? 5 HELX_P HELX_P5 5 PRO A 70 ? ASP A 75 ? PRO A 70 ASP A 75 1 ? 6 HELX_P HELX_P6 6 ASP A 75 ? GLY A 100 ? ASP A 75 GLY A 100 1 ? 26 HELX_P HELX_P7 7 ASP A 101 ? ARG A 124 ? ASP A 101 ARG A 124 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PCA 1 C ? ? ? 1_555 A PHE 2 N ? ? A PCA 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale none ? A CYS 116 SG ? ? ? 1_555 B HEC . CAB ? ? A CYS 116 A HEC 128 1_555 ? ? ? ? ? ? ? 1.844 ? ? covale3 covale none ? A CYS 119 SG ? ? ? 1_555 B HEC . CAC ? ? A CYS 119 A HEC 128 1_555 ? ? ? ? ? ? ? 1.835 ? ? metalc1 metalc ? ? A HIS 120 NE2 ? ? ? 1_555 B HEC . FE ? ? A HIS 120 A HEC 128 1_555 ? ? ? ? ? ? ? 2.098 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NA ? B HEC . ? A HEC 128 ? 1_555 101.1 ? 2 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NB ? B HEC . ? A HEC 128 ? 1_555 94.6 ? 3 NA ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NB ? B HEC . ? A HEC 128 ? 1_555 89.4 ? 4 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NC ? B HEC . ? A HEC 128 ? 1_555 95.9 ? 5 NA ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NC ? B HEC . ? A HEC 128 ? 1_555 163.0 ? 6 NB ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NC ? B HEC . ? A HEC 128 ? 1_555 89.0 ? 7 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 98.1 ? 8 NA ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 88.4 ? 9 NB ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 167.3 ? 10 NC ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 89.4 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 PCA A 1 ? . . . . PCA A 1 ? 1_555 . . . . . . . GLN 1 PCA 'Pyrrolidone carboxylic acid' 'Named protein modification' 2 HEC B . ? CYS A 116 ? HEC A 128 ? 1_555 CYS A 116 ? 1_555 CAB SG CYS 2 HEC None Heme/heme-like 3 HEC B . ? CYS A 119 ? HEC A 128 ? 1_555 CYS A 119 ? 1_555 CAC SG CYS 3 HEC None Heme/heme-like # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A HEC 128 ? 23 'BINDING SITE FOR RESIDUE HEC A 128' AC2 Software A SO4 129 ? 7 'BINDING SITE FOR RESIDUE SO4 A 129' AC3 Software A SO4 130 ? 13 'BINDING SITE FOR RESIDUE SO4 A 130' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ARG A 12 ? ARG A 12 . ? 1_555 ? 2 AC1 23 GLN A 13 ? GLN A 13 . ? 1_555 ? 3 AC1 23 LEU A 16 ? LEU A 16 . ? 1_555 ? 4 AC1 23 THR A 17 ? THR A 17 . ? 1_555 ? 5 AC1 23 MET A 19 ? MET A 19 . ? 1_555 ? 6 AC1 23 ALA A 20 ? ALA A 20 . ? 1_555 ? 7 AC1 23 TRP A 56 ? TRP A 56 . ? 1_555 ? 8 AC1 23 PHE A 59 ? PHE A 59 . ? 1_555 ? 9 AC1 23 GLY A 65 ? GLY A 65 . ? 1_555 ? 10 AC1 23 ASP A 67 ? ASP A 67 . ? 1_555 ? 11 AC1 23 ALA A 68 ? ALA A 68 . ? 1_555 ? 12 AC1 23 GLN A 83 ? GLN A 83 . ? 1_555 ? 13 AC1 23 PHE A 86 ? PHE A 86 . ? 1_555 ? 14 AC1 23 CYS A 116 ? CYS A 116 . ? 1_555 ? 15 AC1 23 CYS A 119 ? CYS A 119 . ? 1_555 ? 16 AC1 23 HIS A 120 ? HIS A 120 . ? 1_555 ? 17 AC1 23 TYR A 123 ? TYR A 123 . ? 1_555 ? 18 AC1 23 ARG A 124 ? ARG A 124 . ? 1_555 ? 19 AC1 23 SO4 C . ? SO4 A 129 . ? 1_555 ? 20 AC1 23 HOH E . ? HOH A 2114 . ? 1_555 ? 21 AC1 23 HOH E . ? HOH A 2421 . ? 1_555 ? 22 AC1 23 HOH E . ? HOH A 2422 . ? 1_555 ? 23 AC1 23 HOH E . ? HOH A 2423 . ? 1_555 ? 24 AC2 7 ARG A 124 ? ARG A 124 . ? 1_555 ? 25 AC2 7 HEC B . ? HEC A 128 . ? 1_555 ? 26 AC2 7 HOH E . ? HOH A 2208 . ? 1_555 ? 27 AC2 7 HOH E . ? HOH A 2414 . ? 1_555 ? 28 AC2 7 HOH E . ? HOH A 2415 . ? 1_555 ? 29 AC2 7 HOH E . ? HOH A 2425 . ? 1_555 ? 30 AC2 7 HOH E . ? HOH A 2427 . ? 1_555 ? 31 AC3 13 SER A 74 ? SER A 74 . ? 1_555 ? 32 AC3 13 ASP A 75 ? ASP A 75 . ? 1_555 ? 33 AC3 13 ALA A 76 ? ALA A 76 . ? 1_555 ? 34 AC3 13 ALA A 77 ? ALA A 77 . ? 1_555 ? 35 AC3 13 LYS A 104 ? LYS A 104 . ? 9_655 ? 36 AC3 13 HOH E . ? HOH A 2301 . ? 1_555 ? 37 AC3 13 HOH E . ? HOH A 2306 . ? 1_555 ? 38 AC3 13 HOH E . ? HOH A 2373 . ? 5_455 ? 39 AC3 13 HOH E . ? HOH A 2378 . ? 9_655 ? 40 AC3 13 HOH E . ? HOH A 2429 . ? 1_555 ? 41 AC3 13 HOH E . ? HOH A 2430 . ? 11_555 ? 42 AC3 13 HOH E . ? HOH A 2430 . ? 1_555 ? 43 AC3 13 HOH E . ? HOH A 2431 . ? 1_555 ? # _pdbx_entry_details.entry_id 2YKZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 46 ? B O A HOH 2238 ? ? 1.90 2 1 O A HOH 2094 ? ? O A HOH 2096 ? ? 2.06 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 106 ? C CZ A ARG 106 ? C NH1 A ARG 106 ? C 126.17 120.30 5.87 0.50 N 2 1 NE A ARG 106 ? C CZ A ARG 106 ? C NH2 A ARG 106 ? C 114.88 120.30 -5.42 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 63 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -98.32 _pdbx_validate_torsion.psi 32.42 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PCA _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PCA _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLU _pdbx_struct_mod_residue.details 'PYROGLUTAMIC ACID' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2075 ? E HOH . 2 1 A HOH 2183 ? E HOH . 3 1 A HOH 2199 ? E HOH . # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2043 ? 6.84 . 2 1 O ? A HOH 2082 ? 6.48 . 3 1 O ? A HOH 2091 ? 5.99 . 4 1 O ? A HOH 2092 ? 6.05 . 5 1 O ? A HOH 2101 ? 6.23 . 6 1 O ? A HOH 2122 ? 6.29 . 7 1 O ? A HOH 2158 ? 6.01 . 8 1 O ? A HOH 2198 ? 5.95 . 9 1 O A A HOH 2219 ? 6.21 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HEC FE FE N N 137 HEC CHA C N N 138 HEC CHB C N N 139 HEC CHC C N N 140 HEC CHD C N N 141 HEC NA N Y N 142 HEC C1A C Y N 143 HEC C2A C Y N 144 HEC C3A C Y N 145 HEC C4A C Y N 146 HEC CMA C N N 147 HEC CAA C N N 148 HEC CBA C N N 149 HEC CGA C N N 150 HEC O1A O N N 151 HEC O2A O N N 152 HEC NB N Y N 153 HEC C1B C Y N 154 HEC C2B C Y N 155 HEC C3B C Y N 156 HEC C4B C Y N 157 HEC CMB C N N 158 HEC CAB C N N 159 HEC CBB C N N 160 HEC NC N Y N 161 HEC C1C C Y N 162 HEC C2C C Y N 163 HEC C3C C Y N 164 HEC C4C C Y N 165 HEC CMC C N N 166 HEC CAC C N N 167 HEC CBC C N N 168 HEC ND N Y N 169 HEC C1D C Y N 170 HEC C2D C Y N 171 HEC C3D C Y N 172 HEC C4D C Y N 173 HEC CMD C N N 174 HEC CAD C N N 175 HEC CBD C N N 176 HEC CGD C N N 177 HEC O1D O N N 178 HEC O2D O N N 179 HEC HHA H N N 180 HEC HHB H N N 181 HEC HHC H N N 182 HEC HHD H N N 183 HEC HMA1 H N N 184 HEC HMA2 H N N 185 HEC HMA3 H N N 186 HEC HAA1 H N N 187 HEC HAA2 H N N 188 HEC HBA1 H N N 189 HEC HBA2 H N N 190 HEC H2A H N N 191 HEC HMB1 H N N 192 HEC HMB2 H N N 193 HEC HMB3 H N N 194 HEC HAB H N N 195 HEC HBB1 H N N 196 HEC HBB2 H N N 197 HEC HBB3 H N N 198 HEC HMC1 H N N 199 HEC HMC2 H N N 200 HEC HMC3 H N N 201 HEC HAC H N N 202 HEC HBC1 H N N 203 HEC HBC2 H N N 204 HEC HBC3 H N N 205 HEC HMD1 H N N 206 HEC HMD2 H N N 207 HEC HMD3 H N N 208 HEC HAD1 H N N 209 HEC HAD2 H N N 210 HEC HBD1 H N N 211 HEC HBD2 H N N 212 HEC H2D H N N 213 HIS N N N N 214 HIS CA C N S 215 HIS C C N N 216 HIS O O N N 217 HIS CB C N N 218 HIS CG C Y N 219 HIS ND1 N Y N 220 HIS CD2 C Y N 221 HIS CE1 C Y N 222 HIS NE2 N Y N 223 HIS OXT O N N 224 HIS H H N N 225 HIS H2 H N N 226 HIS HA H N N 227 HIS HB2 H N N 228 HIS HB3 H N N 229 HIS HD1 H N N 230 HIS HD2 H N N 231 HIS HE1 H N N 232 HIS HE2 H N N 233 HIS HXT H N N 234 HOH O O N N 235 HOH H1 H N N 236 HOH H2 H N N 237 ILE N N N N 238 ILE CA C N S 239 ILE C C N N 240 ILE O O N N 241 ILE CB C N S 242 ILE CG1 C N N 243 ILE CG2 C N N 244 ILE CD1 C N N 245 ILE OXT O N N 246 ILE H H N N 247 ILE H2 H N N 248 ILE HA H N N 249 ILE HB H N N 250 ILE HG12 H N N 251 ILE HG13 H N N 252 ILE HG21 H N N 253 ILE HG22 H N N 254 ILE HG23 H N N 255 ILE HD11 H N N 256 ILE HD12 H N N 257 ILE HD13 H N N 258 ILE HXT H N N 259 LEU N N N N 260 LEU CA C N S 261 LEU C C N N 262 LEU O O N N 263 LEU CB C N N 264 LEU CG C N N 265 LEU CD1 C N N 266 LEU CD2 C N N 267 LEU OXT O N N 268 LEU H H N N 269 LEU H2 H N N 270 LEU HA H N N 271 LEU HB2 H N N 272 LEU HB3 H N N 273 LEU HG H N N 274 LEU HD11 H N N 275 LEU HD12 H N N 276 LEU HD13 H N N 277 LEU HD21 H N N 278 LEU HD22 H N N 279 LEU HD23 H N N 280 LEU HXT H N N 281 LYS N N N N 282 LYS CA C N S 283 LYS C C N N 284 LYS O O N N 285 LYS CB C N N 286 LYS CG C N N 287 LYS CD C N N 288 LYS CE C N N 289 LYS NZ N N N 290 LYS OXT O N N 291 LYS H H N N 292 LYS H2 H N N 293 LYS HA H N N 294 LYS HB2 H N N 295 LYS HB3 H N N 296 LYS HG2 H N N 297 LYS HG3 H N N 298 LYS HD2 H N N 299 LYS HD3 H N N 300 LYS HE2 H N N 301 LYS HE3 H N N 302 LYS HZ1 H N N 303 LYS HZ2 H N N 304 LYS HZ3 H N N 305 LYS HXT H N N 306 MET N N N N 307 MET CA C N S 308 MET C C N N 309 MET O O N N 310 MET CB C N N 311 MET CG C N N 312 MET SD S N N 313 MET CE C N N 314 MET OXT O N N 315 MET H H N N 316 MET H2 H N N 317 MET HA H N N 318 MET HB2 H N N 319 MET HB3 H N N 320 MET HG2 H N N 321 MET HG3 H N N 322 MET HE1 H N N 323 MET HE2 H N N 324 MET HE3 H N N 325 MET HXT H N N 326 PCA N N N N 327 PCA CA C N S 328 PCA CB C N N 329 PCA CG C N N 330 PCA CD C N N 331 PCA OE O N N 332 PCA C C N N 333 PCA O O N N 334 PCA OXT O N N 335 PCA H H N N 336 PCA HA H N N 337 PCA HB2 H N N 338 PCA HB3 H N N 339 PCA HG2 H N N 340 PCA HG3 H N N 341 PCA HXT H N N 342 PHE N N N N 343 PHE CA C N S 344 PHE C C N N 345 PHE O O N N 346 PHE CB C N N 347 PHE CG C Y N 348 PHE CD1 C Y N 349 PHE CD2 C Y N 350 PHE CE1 C Y N 351 PHE CE2 C Y N 352 PHE CZ C Y N 353 PHE OXT O N N 354 PHE H H N N 355 PHE H2 H N N 356 PHE HA H N N 357 PHE HB2 H N N 358 PHE HB3 H N N 359 PHE HD1 H N N 360 PHE HD2 H N N 361 PHE HE1 H N N 362 PHE HE2 H N N 363 PHE HZ H N N 364 PHE HXT H N N 365 PRO N N N N 366 PRO CA C N S 367 PRO C C N N 368 PRO O O N N 369 PRO CB C N N 370 PRO CG C N N 371 PRO CD C N N 372 PRO OXT O N N 373 PRO H H N N 374 PRO HA H N N 375 PRO HB2 H N N 376 PRO HB3 H N N 377 PRO HG2 H N N 378 PRO HG3 H N N 379 PRO HD2 H N N 380 PRO HD3 H N N 381 PRO HXT H N N 382 SER N N N N 383 SER CA C N S 384 SER C C N N 385 SER O O N N 386 SER CB C N N 387 SER OG O N N 388 SER OXT O N N 389 SER H H N N 390 SER H2 H N N 391 SER HA H N N 392 SER HB2 H N N 393 SER HB3 H N N 394 SER HG H N N 395 SER HXT H N N 396 SO4 S S N N 397 SO4 O1 O N N 398 SO4 O2 O N N 399 SO4 O3 O N N 400 SO4 O4 O N N 401 THR N N N N 402 THR CA C N S 403 THR C C N N 404 THR O O N N 405 THR CB C N R 406 THR OG1 O N N 407 THR CG2 C N N 408 THR OXT O N N 409 THR H H N N 410 THR H2 H N N 411 THR HA H N N 412 THR HB H N N 413 THR HG1 H N N 414 THR HG21 H N N 415 THR HG22 H N N 416 THR HG23 H N N 417 THR HXT H N N 418 TRP N N N N 419 TRP CA C N S 420 TRP C C N N 421 TRP O O N N 422 TRP CB C N N 423 TRP CG C Y N 424 TRP CD1 C Y N 425 TRP CD2 C Y N 426 TRP NE1 N Y N 427 TRP CE2 C Y N 428 TRP CE3 C Y N 429 TRP CZ2 C Y N 430 TRP CZ3 C Y N 431 TRP CH2 C Y N 432 TRP OXT O N N 433 TRP H H N N 434 TRP H2 H N N 435 TRP HA H N N 436 TRP HB2 H N N 437 TRP HB3 H N N 438 TRP HD1 H N N 439 TRP HE1 H N N 440 TRP HE3 H N N 441 TRP HZ2 H N N 442 TRP HZ3 H N N 443 TRP HH2 H N N 444 TRP HXT H N N 445 TYR N N N N 446 TYR CA C N S 447 TYR C C N N 448 TYR O O N N 449 TYR CB C N N 450 TYR CG C Y N 451 TYR CD1 C Y N 452 TYR CD2 C Y N 453 TYR CE1 C Y N 454 TYR CE2 C Y N 455 TYR CZ C Y N 456 TYR OH O N N 457 TYR OXT O N N 458 TYR H H N N 459 TYR H2 H N N 460 TYR HA H N N 461 TYR HB2 H N N 462 TYR HB3 H N N 463 TYR HD1 H N N 464 TYR HD2 H N N 465 TYR HE1 H N N 466 TYR HE2 H N N 467 TYR HH H N N 468 TYR HXT H N N 469 VAL N N N N 470 VAL CA C N S 471 VAL C C N N 472 VAL O O N N 473 VAL CB C N N 474 VAL CG1 C N N 475 VAL CG2 C N N 476 VAL OXT O N N 477 VAL H H N N 478 VAL H2 H N N 479 VAL HA H N N 480 VAL HB H N N 481 VAL HG11 H N N 482 VAL HG12 H N N 483 VAL HG13 H N N 484 VAL HG21 H N N 485 VAL HG22 H N N 486 VAL HG23 H N N 487 VAL HXT H N N 488 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HEC FE NA sing N N 129 HEC FE NB sing N N 130 HEC FE NC sing N N 131 HEC FE ND sing N N 132 HEC CHA C1A doub N N 133 HEC CHA C4D sing N N 134 HEC CHA HHA sing N N 135 HEC CHB C4A doub N N 136 HEC CHB C1B sing N N 137 HEC CHB HHB sing N N 138 HEC CHC C4B doub N N 139 HEC CHC C1C sing N N 140 HEC CHC HHC sing N N 141 HEC CHD C4C doub N N 142 HEC CHD C1D sing N N 143 HEC CHD HHD sing N N 144 HEC NA C1A sing Y N 145 HEC NA C4A sing Y N 146 HEC C1A C2A sing Y N 147 HEC C2A C3A doub Y N 148 HEC C2A CAA sing N N 149 HEC C3A C4A sing Y N 150 HEC C3A CMA sing N N 151 HEC CMA HMA1 sing N N 152 HEC CMA HMA2 sing N N 153 HEC CMA HMA3 sing N N 154 HEC CAA CBA sing N N 155 HEC CAA HAA1 sing N N 156 HEC CAA HAA2 sing N N 157 HEC CBA CGA sing N N 158 HEC CBA HBA1 sing N N 159 HEC CBA HBA2 sing N N 160 HEC CGA O1A doub N N 161 HEC CGA O2A sing N N 162 HEC O2A H2A sing N N 163 HEC NB C1B sing Y N 164 HEC NB C4B sing Y N 165 HEC C1B C2B doub Y N 166 HEC C2B C3B sing Y N 167 HEC C2B CMB sing N N 168 HEC C3B C4B sing Y N 169 HEC C3B CAB doub N E 170 HEC CMB HMB1 sing N N 171 HEC CMB HMB2 sing N N 172 HEC CMB HMB3 sing N N 173 HEC CAB CBB sing N N 174 HEC CAB HAB sing N N 175 HEC CBB HBB1 sing N N 176 HEC CBB HBB2 sing N N 177 HEC CBB HBB3 sing N N 178 HEC NC C1C sing Y N 179 HEC NC C4C sing Y N 180 HEC C1C C2C doub Y N 181 HEC C2C C3C sing Y N 182 HEC C2C CMC sing N N 183 HEC C3C C4C sing Y N 184 HEC C3C CAC doub N E 185 HEC CMC HMC1 sing N N 186 HEC CMC HMC2 sing N N 187 HEC CMC HMC3 sing N N 188 HEC CAC CBC sing N N 189 HEC CAC HAC sing N N 190 HEC CBC HBC1 sing N N 191 HEC CBC HBC2 sing N N 192 HEC CBC HBC3 sing N N 193 HEC ND C1D sing Y N 194 HEC ND C4D sing Y N 195 HEC C1D C2D doub Y N 196 HEC C2D C3D sing Y N 197 HEC C2D CMD sing N N 198 HEC C3D C4D doub Y N 199 HEC C3D CAD sing N N 200 HEC CMD HMD1 sing N N 201 HEC CMD HMD2 sing N N 202 HEC CMD HMD3 sing N N 203 HEC CAD CBD sing N N 204 HEC CAD HAD1 sing N N 205 HEC CAD HAD2 sing N N 206 HEC CBD CGD sing N N 207 HEC CBD HBD1 sing N N 208 HEC CBD HBD2 sing N N 209 HEC CGD O1D doub N N 210 HEC CGD O2D sing N N 211 HEC O2D H2D sing N N 212 HIS N CA sing N N 213 HIS N H sing N N 214 HIS N H2 sing N N 215 HIS CA C sing N N 216 HIS CA CB sing N N 217 HIS CA HA sing N N 218 HIS C O doub N N 219 HIS C OXT sing N N 220 HIS CB CG sing N N 221 HIS CB HB2 sing N N 222 HIS CB HB3 sing N N 223 HIS CG ND1 sing Y N 224 HIS CG CD2 doub Y N 225 HIS ND1 CE1 doub Y N 226 HIS ND1 HD1 sing N N 227 HIS CD2 NE2 sing Y N 228 HIS CD2 HD2 sing N N 229 HIS CE1 NE2 sing Y N 230 HIS CE1 HE1 sing N N 231 HIS NE2 HE2 sing N N 232 HIS OXT HXT sing N N 233 HOH O H1 sing N N 234 HOH O H2 sing N N 235 ILE N CA sing N N 236 ILE N H sing N N 237 ILE N H2 sing N N 238 ILE CA C sing N N 239 ILE CA CB sing N N 240 ILE CA HA sing N N 241 ILE C O doub N N 242 ILE C OXT sing N N 243 ILE CB CG1 sing N N 244 ILE CB CG2 sing N N 245 ILE CB HB sing N N 246 ILE CG1 CD1 sing N N 247 ILE CG1 HG12 sing N N 248 ILE CG1 HG13 sing N N 249 ILE CG2 HG21 sing N N 250 ILE CG2 HG22 sing N N 251 ILE CG2 HG23 sing N N 252 ILE CD1 HD11 sing N N 253 ILE CD1 HD12 sing N N 254 ILE CD1 HD13 sing N N 255 ILE OXT HXT sing N N 256 LEU N CA sing N N 257 LEU N H sing N N 258 LEU N H2 sing N N 259 LEU CA C sing N N 260 LEU CA CB sing N N 261 LEU CA HA sing N N 262 LEU C O doub N N 263 LEU C OXT sing N N 264 LEU CB CG sing N N 265 LEU CB HB2 sing N N 266 LEU CB HB3 sing N N 267 LEU CG CD1 sing N N 268 LEU CG CD2 sing N N 269 LEU CG HG sing N N 270 LEU CD1 HD11 sing N N 271 LEU CD1 HD12 sing N N 272 LEU CD1 HD13 sing N N 273 LEU CD2 HD21 sing N N 274 LEU CD2 HD22 sing N N 275 LEU CD2 HD23 sing N N 276 LEU OXT HXT sing N N 277 LYS N CA sing N N 278 LYS N H sing N N 279 LYS N H2 sing N N 280 LYS CA C sing N N 281 LYS CA CB sing N N 282 LYS CA HA sing N N 283 LYS C O doub N N 284 LYS C OXT sing N N 285 LYS CB CG sing N N 286 LYS CB HB2 sing N N 287 LYS CB HB3 sing N N 288 LYS CG CD sing N N 289 LYS CG HG2 sing N N 290 LYS CG HG3 sing N N 291 LYS CD CE sing N N 292 LYS CD HD2 sing N N 293 LYS CD HD3 sing N N 294 LYS CE NZ sing N N 295 LYS CE HE2 sing N N 296 LYS CE HE3 sing N N 297 LYS NZ HZ1 sing N N 298 LYS NZ HZ2 sing N N 299 LYS NZ HZ3 sing N N 300 LYS OXT HXT sing N N 301 MET N CA sing N N 302 MET N H sing N N 303 MET N H2 sing N N 304 MET CA C sing N N 305 MET CA CB sing N N 306 MET CA HA sing N N 307 MET C O doub N N 308 MET C OXT sing N N 309 MET CB CG sing N N 310 MET CB HB2 sing N N 311 MET CB HB3 sing N N 312 MET CG SD sing N N 313 MET CG HG2 sing N N 314 MET CG HG3 sing N N 315 MET SD CE sing N N 316 MET CE HE1 sing N N 317 MET CE HE2 sing N N 318 MET CE HE3 sing N N 319 MET OXT HXT sing N N 320 PCA N CA sing N N 321 PCA N CD sing N N 322 PCA N H sing N N 323 PCA CA CB sing N N 324 PCA CA C sing N N 325 PCA CA HA sing N N 326 PCA CB CG sing N N 327 PCA CB HB2 sing N N 328 PCA CB HB3 sing N N 329 PCA CG CD sing N N 330 PCA CG HG2 sing N N 331 PCA CG HG3 sing N N 332 PCA CD OE doub N N 333 PCA C O doub N N 334 PCA C OXT sing N N 335 PCA OXT HXT sing N N 336 PHE N CA sing N N 337 PHE N H sing N N 338 PHE N H2 sing N N 339 PHE CA C sing N N 340 PHE CA CB sing N N 341 PHE CA HA sing N N 342 PHE C O doub N N 343 PHE C OXT sing N N 344 PHE CB CG sing N N 345 PHE CB HB2 sing N N 346 PHE CB HB3 sing N N 347 PHE CG CD1 doub Y N 348 PHE CG CD2 sing Y N 349 PHE CD1 CE1 sing Y N 350 PHE CD1 HD1 sing N N 351 PHE CD2 CE2 doub Y N 352 PHE CD2 HD2 sing N N 353 PHE CE1 CZ doub Y N 354 PHE CE1 HE1 sing N N 355 PHE CE2 CZ sing Y N 356 PHE CE2 HE2 sing N N 357 PHE CZ HZ sing N N 358 PHE OXT HXT sing N N 359 PRO N CA sing N N 360 PRO N CD sing N N 361 PRO N H sing N N 362 PRO CA C sing N N 363 PRO CA CB sing N N 364 PRO CA HA sing N N 365 PRO C O doub N N 366 PRO C OXT sing N N 367 PRO CB CG sing N N 368 PRO CB HB2 sing N N 369 PRO CB HB3 sing N N 370 PRO CG CD sing N N 371 PRO CG HG2 sing N N 372 PRO CG HG3 sing N N 373 PRO CD HD2 sing N N 374 PRO CD HD3 sing N N 375 PRO OXT HXT sing N N 376 SER N CA sing N N 377 SER N H sing N N 378 SER N H2 sing N N 379 SER CA C sing N N 380 SER CA CB sing N N 381 SER CA HA sing N N 382 SER C O doub N N 383 SER C OXT sing N N 384 SER CB OG sing N N 385 SER CB HB2 sing N N 386 SER CB HB3 sing N N 387 SER OG HG sing N N 388 SER OXT HXT sing N N 389 SO4 S O1 doub N N 390 SO4 S O2 doub N N 391 SO4 S O3 sing N N 392 SO4 S O4 sing N N 393 THR N CA sing N N 394 THR N H sing N N 395 THR N H2 sing N N 396 THR CA C sing N N 397 THR CA CB sing N N 398 THR CA HA sing N N 399 THR C O doub N N 400 THR C OXT sing N N 401 THR CB OG1 sing N N 402 THR CB CG2 sing N N 403 THR CB HB sing N N 404 THR OG1 HG1 sing N N 405 THR CG2 HG21 sing N N 406 THR CG2 HG22 sing N N 407 THR CG2 HG23 sing N N 408 THR OXT HXT sing N N 409 TRP N CA sing N N 410 TRP N H sing N N 411 TRP N H2 sing N N 412 TRP CA C sing N N 413 TRP CA CB sing N N 414 TRP CA HA sing N N 415 TRP C O doub N N 416 TRP C OXT sing N N 417 TRP CB CG sing N N 418 TRP CB HB2 sing N N 419 TRP CB HB3 sing N N 420 TRP CG CD1 doub Y N 421 TRP CG CD2 sing Y N 422 TRP CD1 NE1 sing Y N 423 TRP CD1 HD1 sing N N 424 TRP CD2 CE2 doub Y N 425 TRP CD2 CE3 sing Y N 426 TRP NE1 CE2 sing Y N 427 TRP NE1 HE1 sing N N 428 TRP CE2 CZ2 sing Y N 429 TRP CE3 CZ3 doub Y N 430 TRP CE3 HE3 sing N N 431 TRP CZ2 CH2 doub Y N 432 TRP CZ2 HZ2 sing N N 433 TRP CZ3 CH2 sing Y N 434 TRP CZ3 HZ3 sing N N 435 TRP CH2 HH2 sing N N 436 TRP OXT HXT sing N N 437 TYR N CA sing N N 438 TYR N H sing N N 439 TYR N H2 sing N N 440 TYR CA C sing N N 441 TYR CA CB sing N N 442 TYR CA HA sing N N 443 TYR C O doub N N 444 TYR C OXT sing N N 445 TYR CB CG sing N N 446 TYR CB HB2 sing N N 447 TYR CB HB3 sing N N 448 TYR CG CD1 doub Y N 449 TYR CG CD2 sing Y N 450 TYR CD1 CE1 sing Y N 451 TYR CD1 HD1 sing N N 452 TYR CD2 CE2 doub Y N 453 TYR CD2 HD2 sing N N 454 TYR CE1 CZ doub Y N 455 TYR CE1 HE1 sing N N 456 TYR CE2 CZ sing Y N 457 TYR CE2 HE2 sing N N 458 TYR CZ OH sing N N 459 TYR OH HH sing N N 460 TYR OXT HXT sing N N 461 VAL N CA sing N N 462 VAL N H sing N N 463 VAL N H2 sing N N 464 VAL CA C sing N N 465 VAL CA CB sing N N 466 VAL CA HA sing N N 467 VAL C O doub N N 468 VAL C OXT sing N N 469 VAL CB CG1 sing N N 470 VAL CB CG2 sing N N 471 VAL CB HB sing N N 472 VAL CG1 HG11 sing N N 473 VAL CG1 HG12 sing N N 474 VAL CG1 HG13 sing N N 475 VAL CG2 HG21 sing N N 476 VAL CG2 HG22 sing N N 477 VAL CG2 HG23 sing N N 478 VAL OXT HXT sing N N 479 # _atom_sites.entry_id 2YKZ _atom_sites.fract_transf_matrix[1][1] 0.018702 _atom_sites.fract_transf_matrix[1][2] 0.010798 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021595 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005519 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE H N O S # loop_