data_2YLG # _entry.id 2YLG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YLG pdb_00002ylg 10.2210/pdb2ylg/pdb PDBE EBI-48517 ? ? WWPDB D_1290048517 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-05 2 'Structure model' 2 0 2020-03-11 3 'Structure model' 2 1 2020-07-29 4 'Structure model' 2 2 2023-12-20 5 'Structure model' 2 3 2024-10-16 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' Other 5 2 'Structure model' 'Polymer sequence' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' entity_poly 4 2 'Structure model' pdbx_database_status 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' pdbx_validate_close_contact 7 2 'Structure model' struct_conn 8 3 'Structure model' chem_comp 9 3 'Structure model' struct_site 10 3 'Structure model' struct_site_gen 11 4 'Structure model' chem_comp 12 4 'Structure model' chem_comp_atom 13 4 'Structure model' chem_comp_bond 14 4 'Structure model' database_2 15 4 'Structure model' pdbx_initial_refinement_model 16 5 'Structure model' pdbx_entry_details 17 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 6 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 7 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 8 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 9 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 10 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 11 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 12 2 'Structure model' '_pdbx_database_status.status_code_sf' 13 3 'Structure model' '_chem_comp.type' 14 4 'Structure model' '_chem_comp.pdbx_synonyms' 15 4 'Structure model' '_database_2.pdbx_DOI' 16 4 'Structure model' '_database_2.pdbx_database_accession' 17 5 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YLG _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-06-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2YL3 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND L16G VARIANT AT 1.04 A RESOLUTION' PDB 2XLH unspecified ;REDUCED STRUCTURE OF R124A MUTANT OF CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS ; PDB 2XM0 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124K VARIANT' PDB 1CGO unspecified ;CYTOCHROME C' ; PDB 2YKZ unspecified 'RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS AT 0.84 A RESOLUTION: RESTRAINED REFINEMENT' PDB 2XM4 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124E VARIANT' PDB 1E86 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE WITH CO BOUND TO DISTAL SIDE OF HEME ; PDB 2XL6 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124A VARIANT WITH BOUND NO' PDB 2YL0 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: AS ISOLATED L16A VARIANT AT 0.95 A RESOLUTION' PDB 1E85 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE WITH NO BOUND TO PROXIMAL SIDE OF HEME ; PDB 1CGN unspecified ;CYTOCHROME C' ; PDB 2XLM unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS RECOMBINANT NATIVE WITH BOUND NO' PDB 2YL1 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND L16A VARIANT AT 1.03 A RESOLUTION' PDB 2XLD unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124Q VARIANT' PDB 2XLE unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124K VARIANT WITH BOUND NO' PDB 1E83 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - OXIDIZED STRUCTURE ; PDB 2YL7 unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: AS ISOLATED L16G VARIANT AT 0.9 A RESOLUTION' PDB 2XL8 unspecified ;REDUCED STRUCTURE OF R124F MUTANT OF CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS ; PDB 2XLW unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124Q VARIANT WITH BOUND NO' PDB 1E84 unspecified ;CYTOCHROME C' FROM ALCALIGENES XYLOSOXIDANS - REDUCED STRUCTURE ; PDB 2XLV unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124F VARIANT WITH BOUND NO' PDB 2XLO unspecified 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: FERROUS R124E VARIANT WITH BOUND NO' PDB 2YLI unspecified 'RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS IN ITS FERROUS FORM AT 1.45 A' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Antonyuk, S.V.' 1 'Rustage, N.' 2 'Eady, R.R.' 3 'Hasnain, S.S.' 4 # _citation.id primary _citation.title 'Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 15780 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21900609 _citation.pdbx_database_id_DOI 10.1073/PNAS.1109051108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Antonyuk, S.V.' 1 ? primary 'Rustage, N.' 2 ? primary 'Petersen, C.A.' 3 ? primary 'Arnst, J.L.' 4 ? primary 'Heyes, D.J.' 5 ? primary 'Sharma, R.' 6 ? primary 'Berry, N.G.' 7 ? primary 'Scrutton, N.S.' 8 ? primary 'Eady, R.R.' 9 ? primary 'Andrew, C.R.' 10 ? primary 'Hasnain, S.S.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;CYTOCHROME C' ; 13589.362 1 ? YES ? ? 2 non-polymer syn 'HEME C' 618.503 1 ? ? ? ? 3 non-polymer syn 'CARBON MONOXIDE' 28.010 1 ? ? ? ? 4 non-polymer syn 'ASCORBIC ACID' 176.124 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 6 water nat water 18.015 320 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CYTOCHROME C PRIME' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(PCA)FAKPEDAVKYRQSAATLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDA ASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASCKACHDAYRKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;QFAKPEDAVKYRQSAATLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLSALPWAAFGPGTEGGDARPEIWSDAASFK QKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGASCKACHDAYRKKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'HEME C' HEC 3 'CARBON MONOXIDE' CMO 4 'ASCORBIC ACID' ASC 5 'SULFATE ION' SO4 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 PHE n 1 3 ALA n 1 4 LYS n 1 5 PRO n 1 6 GLU n 1 7 ASP n 1 8 ALA n 1 9 VAL n 1 10 LYS n 1 11 TYR n 1 12 ARG n 1 13 GLN n 1 14 SER n 1 15 ALA n 1 16 ALA n 1 17 THR n 1 18 LEU n 1 19 MET n 1 20 ALA n 1 21 SER n 1 22 HIS n 1 23 PHE n 1 24 GLY n 1 25 ARG n 1 26 MET n 1 27 THR n 1 28 PRO n 1 29 VAL n 1 30 VAL n 1 31 LYS n 1 32 GLY n 1 33 GLN n 1 34 ALA n 1 35 PRO n 1 36 TYR n 1 37 ASP n 1 38 ALA n 1 39 ALA n 1 40 GLN n 1 41 ILE n 1 42 LYS n 1 43 ALA n 1 44 ASN n 1 45 VAL n 1 46 GLU n 1 47 VAL n 1 48 LEU n 1 49 LYS n 1 50 THR n 1 51 LEU n 1 52 SER n 1 53 ALA n 1 54 LEU n 1 55 PRO n 1 56 TRP n 1 57 ALA n 1 58 ALA n 1 59 PHE n 1 60 GLY n 1 61 PRO n 1 62 GLY n 1 63 THR n 1 64 GLU n 1 65 GLY n 1 66 GLY n 1 67 ASP n 1 68 ALA n 1 69 ARG n 1 70 PRO n 1 71 GLU n 1 72 ILE n 1 73 TRP n 1 74 SER n 1 75 ASP n 1 76 ALA n 1 77 ALA n 1 78 SER n 1 79 PHE n 1 80 LYS n 1 81 GLN n 1 82 LYS n 1 83 GLN n 1 84 GLN n 1 85 ALA n 1 86 PHE n 1 87 GLN n 1 88 ASP n 1 89 ASN n 1 90 ILE n 1 91 VAL n 1 92 LYS n 1 93 LEU n 1 94 SER n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 ASP n 1 99 ALA n 1 100 GLY n 1 101 ASP n 1 102 LEU n 1 103 ASP n 1 104 LYS n 1 105 LEU n 1 106 ARG n 1 107 ALA n 1 108 ALA n 1 109 PHE n 1 110 GLY n 1 111 ASP n 1 112 VAL n 1 113 GLY n 1 114 ALA n 1 115 SER n 1 116 CYS n 1 117 LYS n 1 118 ALA n 1 119 CYS n 1 120 HIS n 1 121 ASP n 1 122 ALA n 1 123 TYR n 1 124 ARG n 1 125 LYS n 1 126 LYS n 1 127 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ACHROMOBACTER XYLOSOXIDANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85698 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PEC86 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASC L-saccharide . 'ASCORBIC ACID' 'Vitamin C' 'C6 H8 O6' 176.124 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CMO non-polymer . 'CARBON MONOXIDE' ? 'C O' 28.010 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEC non-polymer . 'HEME C' ? 'C34 H34 Fe N4 O4' 618.503 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PCA A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 MET 19 19 19 MET MET A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 TRP 73 73 73 TRP TRP A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 CYS 116 116 116 CYS CYS A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 HIS 120 120 120 HIS HIS A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 LYS 127 127 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC 1 128 128 HEC HEC A . C 3 CMO 1 129 129 CMO CMO A . D 4 ASC 1 130 130 ASC ASC A . E 5 SO4 1 131 131 SO4 SO4 A . F 5 SO4 1 132 132 SO4 SO4 A . G 6 HOH 1 2001 2001 HOH HOH A . G 6 HOH 2 2002 2002 HOH HOH A . G 6 HOH 3 2003 2003 HOH HOH A . G 6 HOH 4 2004 2004 HOH HOH A . G 6 HOH 5 2005 2005 HOH HOH A . G 6 HOH 6 2007 2007 HOH HOH A . G 6 HOH 7 2008 2008 HOH HOH A . G 6 HOH 8 2009 2009 HOH HOH A . G 6 HOH 9 2010 2010 HOH HOH A . G 6 HOH 10 2011 2011 HOH HOH A . G 6 HOH 11 2012 2012 HOH HOH A . G 6 HOH 12 2013 2013 HOH HOH A . G 6 HOH 13 2014 2014 HOH HOH A . G 6 HOH 14 2015 2015 HOH HOH A . G 6 HOH 15 2016 2016 HOH HOH A . G 6 HOH 16 2017 2017 HOH HOH A . G 6 HOH 17 2018 2018 HOH HOH A . G 6 HOH 18 2019 2019 HOH HOH A . G 6 HOH 19 2020 2020 HOH HOH A . G 6 HOH 20 2022 2022 HOH HOH A . G 6 HOH 21 2023 2023 HOH HOH A . G 6 HOH 22 2024 2024 HOH HOH A . G 6 HOH 23 2025 2025 HOH HOH A . G 6 HOH 24 2026 2026 HOH HOH A . G 6 HOH 25 2027 2027 HOH HOH A . G 6 HOH 26 2028 2028 HOH HOH A . G 6 HOH 27 2029 2029 HOH HOH A . G 6 HOH 28 2030 2030 HOH HOH A . G 6 HOH 29 2031 2031 HOH HOH A . G 6 HOH 30 2033 2033 HOH HOH A . G 6 HOH 31 2034 2034 HOH HOH A . G 6 HOH 32 2035 2035 HOH HOH A . G 6 HOH 33 2036 2036 HOH HOH A . G 6 HOH 34 2037 2037 HOH HOH A . G 6 HOH 35 2038 2038 HOH HOH A . G 6 HOH 36 2040 2040 HOH HOH A . G 6 HOH 37 2041 2041 HOH HOH A . G 6 HOH 38 2042 2042 HOH HOH A . G 6 HOH 39 2043 2043 HOH HOH A . G 6 HOH 40 2044 2044 HOH HOH A . G 6 HOH 41 2045 2045 HOH HOH A . G 6 HOH 42 2046 2046 HOH HOH A . G 6 HOH 43 2047 2047 HOH HOH A . G 6 HOH 44 2048 2048 HOH HOH A . G 6 HOH 45 2049 2049 HOH HOH A . G 6 HOH 46 2050 2050 HOH HOH A . G 6 HOH 47 2051 2051 HOH HOH A . G 6 HOH 48 2052 2052 HOH HOH A . G 6 HOH 49 2053 2053 HOH HOH A . G 6 HOH 50 2054 2054 HOH HOH A . G 6 HOH 51 2055 2055 HOH HOH A . G 6 HOH 52 2056 2056 HOH HOH A . G 6 HOH 53 2057 2057 HOH HOH A . G 6 HOH 54 2058 2058 HOH HOH A . G 6 HOH 55 2059 2059 HOH HOH A . G 6 HOH 56 2060 2060 HOH HOH A . G 6 HOH 57 2061 2061 HOH HOH A . G 6 HOH 58 2062 2062 HOH HOH A . G 6 HOH 59 2063 2063 HOH HOH A . G 6 HOH 60 2064 2064 HOH HOH A . G 6 HOH 61 2065 2065 HOH HOH A . G 6 HOH 62 2066 2066 HOH HOH A . G 6 HOH 63 2067 2067 HOH HOH A . G 6 HOH 64 2068 2068 HOH HOH A . G 6 HOH 65 2069 2069 HOH HOH A . G 6 HOH 66 2070 2070 HOH HOH A . G 6 HOH 67 2071 2071 HOH HOH A . G 6 HOH 68 2072 2072 HOH HOH A . G 6 HOH 69 2073 2073 HOH HOH A . G 6 HOH 70 2074 2074 HOH HOH A . G 6 HOH 71 2075 2075 HOH HOH A . G 6 HOH 72 2076 2076 HOH HOH A . G 6 HOH 73 2077 2077 HOH HOH A . G 6 HOH 74 2078 2078 HOH HOH A . G 6 HOH 75 2079 2079 HOH HOH A . G 6 HOH 76 2080 2080 HOH HOH A . G 6 HOH 77 2081 2081 HOH HOH A . G 6 HOH 78 2082 2082 HOH HOH A . G 6 HOH 79 2083 2083 HOH HOH A . G 6 HOH 80 2084 2084 HOH HOH A . G 6 HOH 81 2085 2085 HOH HOH A . G 6 HOH 82 2086 2086 HOH HOH A . G 6 HOH 83 2087 2087 HOH HOH A . G 6 HOH 84 2088 2088 HOH HOH A . G 6 HOH 85 2089 2089 HOH HOH A . G 6 HOH 86 2090 2090 HOH HOH A . G 6 HOH 87 2092 2092 HOH HOH A . G 6 HOH 88 2093 2093 HOH HOH A . G 6 HOH 89 2094 2094 HOH HOH A . G 6 HOH 90 2095 2095 HOH HOH A . G 6 HOH 91 2096 2096 HOH HOH A . G 6 HOH 92 2097 2097 HOH HOH A . G 6 HOH 93 2098 2098 HOH HOH A . G 6 HOH 94 2099 2099 HOH HOH A . G 6 HOH 95 2101 2101 HOH HOH A . G 6 HOH 96 2102 2102 HOH HOH A . G 6 HOH 97 2104 2104 HOH HOH A . G 6 HOH 98 2105 2105 HOH HOH A . G 6 HOH 99 2106 2106 HOH HOH A . G 6 HOH 100 2107 2107 HOH HOH A . G 6 HOH 101 2108 2108 HOH HOH A . G 6 HOH 102 2109 2109 HOH HOH A . G 6 HOH 103 2110 2110 HOH HOH A . G 6 HOH 104 2111 2111 HOH HOH A . G 6 HOH 105 2112 2112 HOH HOH A . G 6 HOH 106 2113 2113 HOH HOH A . G 6 HOH 107 2114 2114 HOH HOH A . G 6 HOH 108 2115 2115 HOH HOH A . G 6 HOH 109 2116 2116 HOH HOH A . G 6 HOH 110 2117 2117 HOH HOH A . G 6 HOH 111 2118 2118 HOH HOH A . G 6 HOH 112 2119 2119 HOH HOH A . G 6 HOH 113 2120 2120 HOH HOH A . G 6 HOH 114 2121 2121 HOH HOH A . G 6 HOH 115 2123 2123 HOH HOH A . G 6 HOH 116 2124 2124 HOH HOH A . G 6 HOH 117 2125 2125 HOH HOH A . G 6 HOH 118 2126 2126 HOH HOH A . G 6 HOH 119 2127 2127 HOH HOH A . G 6 HOH 120 2128 2128 HOH HOH A . G 6 HOH 121 2129 2129 HOH HOH A . G 6 HOH 122 2130 2130 HOH HOH A . G 6 HOH 123 2131 2131 HOH HOH A . G 6 HOH 124 2132 2132 HOH HOH A . G 6 HOH 125 2133 2133 HOH HOH A . G 6 HOH 126 2134 2134 HOH HOH A . G 6 HOH 127 2135 2135 HOH HOH A . G 6 HOH 128 2137 2137 HOH HOH A . G 6 HOH 129 2138 2138 HOH HOH A . G 6 HOH 130 2139 2139 HOH HOH A . G 6 HOH 131 2140 2140 HOH HOH A . G 6 HOH 132 2141 2141 HOH HOH A . G 6 HOH 133 2142 2142 HOH HOH A . G 6 HOH 134 2143 2143 HOH HOH A . G 6 HOH 135 2144 2144 HOH HOH A . G 6 HOH 136 2145 2145 HOH HOH A . G 6 HOH 137 2146 2146 HOH HOH A . G 6 HOH 138 2147 2147 HOH HOH A . G 6 HOH 139 2148 2148 HOH HOH A . G 6 HOH 140 2149 2149 HOH HOH A . G 6 HOH 141 2150 2150 HOH HOH A . G 6 HOH 142 2151 2151 HOH HOH A . G 6 HOH 143 2152 2152 HOH HOH A . G 6 HOH 144 2153 2153 HOH HOH A . G 6 HOH 145 2154 2154 HOH HOH A . G 6 HOH 146 2155 2155 HOH HOH A . G 6 HOH 147 2156 2156 HOH HOH A . G 6 HOH 148 2157 2157 HOH HOH A . G 6 HOH 149 2158 2158 HOH HOH A . G 6 HOH 150 2159 2159 HOH HOH A . G 6 HOH 151 2160 2160 HOH HOH A . G 6 HOH 152 2161 2161 HOH HOH A . G 6 HOH 153 2162 2162 HOH HOH A . G 6 HOH 154 2163 2163 HOH HOH A . G 6 HOH 155 2164 2164 HOH HOH A . G 6 HOH 156 2166 2166 HOH HOH A . G 6 HOH 157 2167 2167 HOH HOH A . G 6 HOH 158 2168 2168 HOH HOH A . G 6 HOH 159 2169 2169 HOH HOH A . G 6 HOH 160 2170 2170 HOH HOH A . G 6 HOH 161 2171 2171 HOH HOH A . G 6 HOH 162 2172 2172 HOH HOH A . G 6 HOH 163 2173 2173 HOH HOH A . G 6 HOH 164 2174 2174 HOH HOH A . G 6 HOH 165 2175 2175 HOH HOH A . G 6 HOH 166 2176 2176 HOH HOH A . G 6 HOH 167 2177 2177 HOH HOH A . G 6 HOH 168 2178 2178 HOH HOH A . G 6 HOH 169 2179 2179 HOH HOH A . G 6 HOH 170 2180 2180 HOH HOH A . G 6 HOH 171 2181 2181 HOH HOH A . G 6 HOH 172 2182 2182 HOH HOH A . G 6 HOH 173 2183 2183 HOH HOH A . G 6 HOH 174 2184 2184 HOH HOH A . G 6 HOH 175 2185 2185 HOH HOH A . G 6 HOH 176 2186 2186 HOH HOH A . G 6 HOH 177 2187 2187 HOH HOH A . G 6 HOH 178 2188 2188 HOH HOH A . G 6 HOH 179 2189 2189 HOH HOH A . G 6 HOH 180 2190 2190 HOH HOH A . G 6 HOH 181 2192 2192 HOH HOH A . G 6 HOH 182 2193 2193 HOH HOH A . G 6 HOH 183 2194 2194 HOH HOH A . G 6 HOH 184 2195 2195 HOH HOH A . G 6 HOH 185 2196 2196 HOH HOH A . G 6 HOH 186 2197 2197 HOH HOH A . G 6 HOH 187 2198 2198 HOH HOH A . G 6 HOH 188 2199 2199 HOH HOH A . G 6 HOH 189 2200 2200 HOH HOH A . G 6 HOH 190 2201 2201 HOH HOH A . G 6 HOH 191 2202 2202 HOH HOH A . G 6 HOH 192 2203 2203 HOH HOH A . G 6 HOH 193 2204 2204 HOH HOH A . G 6 HOH 194 2205 2205 HOH HOH A . G 6 HOH 195 2206 2206 HOH HOH A . G 6 HOH 196 2207 2207 HOH HOH A . G 6 HOH 197 2208 2208 HOH HOH A . G 6 HOH 198 2209 2209 HOH HOH A . G 6 HOH 199 2210 2210 HOH HOH A . G 6 HOH 200 2211 2211 HOH HOH A . G 6 HOH 201 2212 2212 HOH HOH A . G 6 HOH 202 2213 2213 HOH HOH A . G 6 HOH 203 2215 2215 HOH HOH A . G 6 HOH 204 2217 2217 HOH HOH A . G 6 HOH 205 2218 2218 HOH HOH A . G 6 HOH 206 2219 2219 HOH HOH A . G 6 HOH 207 2220 2220 HOH HOH A . G 6 HOH 208 2221 2221 HOH HOH A . G 6 HOH 209 2222 2222 HOH HOH A . G 6 HOH 210 2223 2223 HOH HOH A . G 6 HOH 211 2224 2224 HOH HOH A . G 6 HOH 212 2225 2225 HOH HOH A . G 6 HOH 213 2226 2226 HOH HOH A . G 6 HOH 214 2228 2228 HOH HOH A . G 6 HOH 215 2229 2229 HOH HOH A . G 6 HOH 216 2231 2231 HOH HOH A . G 6 HOH 217 2232 2232 HOH HOH A . G 6 HOH 218 2233 2233 HOH HOH A . G 6 HOH 219 2234 2234 HOH HOH A . G 6 HOH 220 2235 2235 HOH HOH A . G 6 HOH 221 2236 2236 HOH HOH A . G 6 HOH 222 2237 2237 HOH HOH A . G 6 HOH 223 2239 2239 HOH HOH A . G 6 HOH 224 2240 2240 HOH HOH A . G 6 HOH 225 2241 2241 HOH HOH A . G 6 HOH 226 2242 2242 HOH HOH A . G 6 HOH 227 2243 2243 HOH HOH A . G 6 HOH 228 2244 2244 HOH HOH A . G 6 HOH 229 2245 2245 HOH HOH A . G 6 HOH 230 2246 2246 HOH HOH A . G 6 HOH 231 2247 2247 HOH HOH A . G 6 HOH 232 2248 2248 HOH HOH A . G 6 HOH 233 2249 2249 HOH HOH A . G 6 HOH 234 2250 2250 HOH HOH A . G 6 HOH 235 2251 2251 HOH HOH A . G 6 HOH 236 2252 2252 HOH HOH A . G 6 HOH 237 2253 2253 HOH HOH A . G 6 HOH 238 2254 2254 HOH HOH A . G 6 HOH 239 2255 2255 HOH HOH A . G 6 HOH 240 2256 2256 HOH HOH A . G 6 HOH 241 2257 2257 HOH HOH A . G 6 HOH 242 2258 2258 HOH HOH A . G 6 HOH 243 2259 2259 HOH HOH A . G 6 HOH 244 2260 2260 HOH HOH A . G 6 HOH 245 2261 2261 HOH HOH A . G 6 HOH 246 2262 2262 HOH HOH A . G 6 HOH 247 2263 2263 HOH HOH A . G 6 HOH 248 2264 2264 HOH HOH A . G 6 HOH 249 2265 2265 HOH HOH A . G 6 HOH 250 2266 2266 HOH HOH A . G 6 HOH 251 2267 2267 HOH HOH A . G 6 HOH 252 2268 2268 HOH HOH A . G 6 HOH 253 2269 2269 HOH HOH A . G 6 HOH 254 2270 2270 HOH HOH A . G 6 HOH 255 2273 2273 HOH HOH A . G 6 HOH 256 2274 2274 HOH HOH A . G 6 HOH 257 2275 2275 HOH HOH A . G 6 HOH 258 2276 2276 HOH HOH A . G 6 HOH 259 2277 2277 HOH HOH A . G 6 HOH 260 2278 2278 HOH HOH A . G 6 HOH 261 2279 2279 HOH HOH A . G 6 HOH 262 2280 2280 HOH HOH A . G 6 HOH 263 2281 2281 HOH HOH A . G 6 HOH 264 2282 2282 HOH HOH A . G 6 HOH 265 2283 2283 HOH HOH A . G 6 HOH 266 2284 2284 HOH HOH A . G 6 HOH 267 2285 2285 HOH HOH A . G 6 HOH 268 2286 2286 HOH HOH A . G 6 HOH 269 2287 2287 HOH HOH A . G 6 HOH 270 2288 2288 HOH HOH A . G 6 HOH 271 2289 2289 HOH HOH A . G 6 HOH 272 2290 2290 HOH HOH A . G 6 HOH 273 2291 2291 HOH HOH A . G 6 HOH 274 2292 2292 HOH HOH A . G 6 HOH 275 2294 2294 HOH HOH A . G 6 HOH 276 2295 2295 HOH HOH A . G 6 HOH 277 2296 2296 HOH HOH A . G 6 HOH 278 2297 2297 HOH HOH A . G 6 HOH 279 2298 2298 HOH HOH A . G 6 HOH 280 2299 2299 HOH HOH A . G 6 HOH 281 2300 2300 HOH HOH A . G 6 HOH 282 2301 2301 HOH HOH A . G 6 HOH 283 2302 2302 HOH HOH A . G 6 HOH 284 2303 2303 HOH HOH A . G 6 HOH 285 2304 2304 HOH HOH A . G 6 HOH 286 2305 2305 HOH HOH A . G 6 HOH 287 2306 2306 HOH HOH A . G 6 HOH 288 2307 2307 HOH HOH A . G 6 HOH 289 2308 2308 HOH HOH A . G 6 HOH 290 2309 2309 HOH HOH A . G 6 HOH 291 2310 2310 HOH HOH A . G 6 HOH 292 2311 2311 HOH HOH A . G 6 HOH 293 2312 2312 HOH HOH A . G 6 HOH 294 2313 2313 HOH HOH A . G 6 HOH 295 2316 2316 HOH HOH A . G 6 HOH 296 2317 2317 HOH HOH A . G 6 HOH 297 2319 2319 HOH HOH A . G 6 HOH 298 2320 2320 HOH HOH A . G 6 HOH 299 2321 2321 HOH HOH A . G 6 HOH 300 2322 2322 HOH HOH A . G 6 HOH 301 2323 2323 HOH HOH A . G 6 HOH 302 2324 2324 HOH HOH A . G 6 HOH 303 2325 2325 HOH HOH A . G 6 HOH 304 2326 2326 HOH HOH A . G 6 HOH 305 2327 2327 HOH HOH A . G 6 HOH 306 2328 2328 HOH HOH A . G 6 HOH 307 2329 2329 HOH HOH A . G 6 HOH 308 2330 2330 HOH HOH A . G 6 HOH 309 2331 2331 HOH HOH A . G 6 HOH 310 2332 2332 HOH HOH A . G 6 HOH 311 2333 2333 HOH HOH A . G 6 HOH 312 2334 2334 HOH HOH A . G 6 HOH 313 2335 2335 HOH HOH A . G 6 HOH 314 2336 2336 HOH HOH A . G 6 HOH 315 2337 2337 HOH HOH A . G 6 HOH 316 2338 2338 HOH HOH A . G 6 HOH 317 2339 2339 HOH HOH A . G 6 HOH 318 2340 2340 HOH HOH A . G 6 HOH 319 2341 2341 HOH HOH A . G 6 HOH 320 2342 2342 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _cell.entry_id 2YLG _cell.length_a 53.640 _cell.length_b 53.640 _cell.length_c 181.443 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2YLG _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # _exptl.entry_id 2YLG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.19 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'AMMONIUM SULPHATE, TRIS PH 7.5.' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2009-06-04 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI111 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 0.9 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2YLG _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 45.00 _reflns.d_resolution_high 1.05 _reflns.number_obs 73117 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.50 _reflns.B_iso_Wilson_estimate 11.8 _reflns.pdbx_redundancy 11 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.05 _reflns_shell.d_res_low 1.10 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.80 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.80 _reflns_shell.pdbx_redundancy 9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2YLG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 70167 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.45 _refine.ls_d_res_high 1.05 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.13846 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.13793 _refine.ls_R_factor_R_free 0.15076 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.0 _refine.ls_number_reflns_R_free 2924 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.974 _refine.B_iso_mean 19.592 _refine.aniso_B[1][1] -0.68 _refine.aniso_B[2][2] -0.68 _refine.aniso_B[3][3] 1.03 _refine.aniso_B[1][2] -0.34 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES REFINED INDIVIDUALLY.' _refine.pdbx_starting_model 'PDB ENTRY 2YL0' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.024 _refine.pdbx_overall_ESU_R_Free 0.024 _refine.overall_SU_ML 0.020 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.934 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 946 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.number_atoms_solvent 320 _refine_hist.number_atoms_total 1333 _refine_hist.d_res_high 1.05 _refine_hist.d_res_low 46.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.022 ? 1256 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 736 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.042 2.078 ? 1738 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.006 3.000 ? 1686 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.094 5.000 ? 172 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.833 24.510 ? 51 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.190 15.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.908 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.108 0.200 ? 170 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.021 ? 1390 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.004 0.020 ? 199 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.886 1.500 ? 766 'X-RAY DIFFRACTION' ? r_mcbond_other 0.646 1.500 ? 208 'X-RAY DIFFRACTION' ? r_mcangle_it 2.848 2.000 ? 1228 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.596 3.000 ? 490 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.938 4.500 ? 501 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.420 3.000 ? 1992 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.050 _refine_ls_shell.d_res_low 1.077 _refine_ls_shell.number_reflns_R_work 5074 _refine_ls_shell.R_factor_R_work 0.323 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 211 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2YLG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YLG _struct.title 'CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: ASCORBATE AND CARBON MONOOXIDE BOUND L16A VARIANT AT 1.05 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YLG _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT, HAEMOPROTEIN, 4-HELIX BUNDLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CYCP_ALCXX _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P00138 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YLG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00138 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 127 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 127 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2YLG _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 16 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00138 _struct_ref_seq_dif.db_mon_id LEU _struct_ref_seq_dif.pdbx_seq_db_seq_num 16 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 16 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5560 ? 1 MORE -109.2 ? 1 'SSA (A^2)' 12310 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_555 -y,-x,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.2405000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 4 ? ARG A 25 ? LYS A 4 ARG A 25 1 ? 22 HELX_P HELX_P2 2 MET A 26 ? LYS A 31 ? MET A 26 LYS A 31 1 ? 6 HELX_P HELX_P3 3 ASP A 37 ? ALA A 53 ? ASP A 37 ALA A 53 1 ? 17 HELX_P HELX_P4 4 LEU A 54 ? PHE A 59 ? LEU A 54 PHE A 59 5 ? 6 HELX_P HELX_P5 5 PRO A 70 ? ASP A 75 ? PRO A 70 ASP A 75 1 ? 6 HELX_P HELX_P6 6 ASP A 75 ? GLY A 100 ? ASP A 75 GLY A 100 1 ? 26 HELX_P HELX_P7 7 ASP A 101 ? ARG A 124 ? ASP A 101 ARG A 124 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PCA 1 C ? ? ? 1_555 A PHE 2 N ? ? A PCA 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale none ? A CYS 116 SG ? ? ? 1_555 B HEC . CAB ? ? A CYS 116 A HEC 128 1_555 ? ? ? ? ? ? ? 1.863 ? ? covale3 covale none ? A CYS 119 SG ? ? ? 1_555 B HEC . CAC ? ? A CYS 119 A HEC 128 1_555 ? ? ? ? ? ? ? 1.898 ? ? metalc1 metalc ? ? A HIS 120 NE2 ? ? ? 1_555 B HEC . FE ? ? A HIS 120 A HEC 128 1_555 ? ? ? ? ? ? ? 2.078 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NA ? B HEC . ? A HEC 128 ? 1_555 89.0 ? 2 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NB ? B HEC . ? A HEC 128 ? 1_555 88.2 ? 3 NA ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NB ? B HEC . ? A HEC 128 ? 1_555 91.3 ? 4 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NC ? B HEC . ? A HEC 128 ? 1_555 87.4 ? 5 NA ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NC ? B HEC . ? A HEC 128 ? 1_555 176.2 ? 6 NB ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 NC ? B HEC . ? A HEC 128 ? 1_555 89.8 ? 7 NE2 ? A HIS 120 ? A HIS 120 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 90.0 ? 8 NA ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 88.4 ? 9 NB ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 178.2 ? 10 NC ? B HEC . ? A HEC 128 ? 1_555 FE ? B HEC . ? A HEC 128 ? 1_555 ND ? B HEC . ? A HEC 128 ? 1_555 90.4 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 PCA A 1 ? . . . . PCA A 1 ? 1_555 . . . . . . . GLN 1 PCA 'Pyrrolidone carboxylic acid' 'Named protein modification' 2 HEC B . ? CYS A 116 ? HEC A 128 ? 1_555 CYS A 116 ? 1_555 CAB SG CYS 2 HEC None Heme/heme-like 3 HEC B . ? CYS A 119 ? HEC A 128 ? 1_555 CYS A 119 ? 1_555 CAC SG CYS 3 HEC None Heme/heme-like # _pdbx_entry_details.entry_id 2YLG _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, LEU 16 TO ALA' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 FE A HEC 128 ? ? C A CMO 129 ? ? 1.82 2 1 O A HOH 2109 ? ? O A HOH 2217 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 2112 ? ? 1_555 O A HOH 2178 ? ? 8_545 2.18 2 1 O A HOH 2069 ? ? 1_555 O A HOH 2109 ? ? 5_555 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 37 ? ? CG A ASP 37 ? ? OD1 A ASP 37 ? ? 125.58 118.30 7.28 0.90 N 2 1 CA A CYS 116 ? ? CB A CYS 116 ? ? SG A CYS 116 ? ? 121.34 114.20 7.14 1.10 N # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PCA _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PCA _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLU _pdbx_struct_mod_residue.details 'PYROGLUTAMIC ACID' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2065 ? G HOH . 2 1 A HOH 2075 ? G HOH . # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2014 ? 6.57 . 2 1 O ? A HOH 2034 ? 5.99 . 3 1 O ? A HOH 2043 ? 6.88 . 4 1 O ? A HOH 2067 ? 6.55 . 5 1 O ? A HOH 2068 ? 6.98 . 6 1 O ? A HOH 2077 ? 6.37 . 7 1 O ? A HOH 2078 ? 6.54 . 8 1 O ? A HOH 2106 ? 5.85 . 9 1 O ? A HOH 2135 ? 6.28 . 10 1 O ? A HOH 2166 ? 6.39 . 11 1 O ? A HOH 2173 ? . 6.99 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id LYS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 127 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id LYS _pdbx_unobs_or_zero_occ_residues.label_seq_id 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASC C1 C N N 41 ASC C2 C N N 42 ASC C3 C N N 43 ASC C4 C N R 44 ASC C5 C N S 45 ASC C6 C N N 46 ASC O1 O N N 47 ASC O2 O N N 48 ASC O3 O N N 49 ASC O4 O N N 50 ASC O5 O N N 51 ASC O6 O N N 52 ASC H4 H N N 53 ASC H5 H N N 54 ASC H61 H N N 55 ASC H62 H N N 56 ASC HO2 H N N 57 ASC HO3 H N N 58 ASC HO5 H N N 59 ASC HO6 H N N 60 ASN N N N N 61 ASN CA C N S 62 ASN C C N N 63 ASN O O N N 64 ASN CB C N N 65 ASN CG C N N 66 ASN OD1 O N N 67 ASN ND2 N N N 68 ASN OXT O N N 69 ASN H H N N 70 ASN H2 H N N 71 ASN HA H N N 72 ASN HB2 H N N 73 ASN HB3 H N N 74 ASN HD21 H N N 75 ASN HD22 H N N 76 ASN HXT H N N 77 ASP N N N N 78 ASP CA C N S 79 ASP C C N N 80 ASP O O N N 81 ASP CB C N N 82 ASP CG C N N 83 ASP OD1 O N N 84 ASP OD2 O N N 85 ASP OXT O N N 86 ASP H H N N 87 ASP H2 H N N 88 ASP HA H N N 89 ASP HB2 H N N 90 ASP HB3 H N N 91 ASP HD2 H N N 92 ASP HXT H N N 93 CMO C C N N 94 CMO O O N N 95 CYS N N N N 96 CYS CA C N R 97 CYS C C N N 98 CYS O O N N 99 CYS CB C N N 100 CYS SG S N N 101 CYS OXT O N N 102 CYS H H N N 103 CYS H2 H N N 104 CYS HA H N N 105 CYS HB2 H N N 106 CYS HB3 H N N 107 CYS HG H N N 108 CYS HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HEC FE FE N N 159 HEC CHA C N N 160 HEC CHB C N N 161 HEC CHC C N N 162 HEC CHD C N N 163 HEC NA N Y N 164 HEC C1A C Y N 165 HEC C2A C Y N 166 HEC C3A C Y N 167 HEC C4A C Y N 168 HEC CMA C N N 169 HEC CAA C N N 170 HEC CBA C N N 171 HEC CGA C N N 172 HEC O1A O N N 173 HEC O2A O N N 174 HEC NB N Y N 175 HEC C1B C Y N 176 HEC C2B C Y N 177 HEC C3B C Y N 178 HEC C4B C Y N 179 HEC CMB C N N 180 HEC CAB C N N 181 HEC CBB C N N 182 HEC NC N Y N 183 HEC C1C C Y N 184 HEC C2C C Y N 185 HEC C3C C Y N 186 HEC C4C C Y N 187 HEC CMC C N N 188 HEC CAC C N N 189 HEC CBC C N N 190 HEC ND N Y N 191 HEC C1D C Y N 192 HEC C2D C Y N 193 HEC C3D C Y N 194 HEC C4D C Y N 195 HEC CMD C N N 196 HEC CAD C N N 197 HEC CBD C N N 198 HEC CGD C N N 199 HEC O1D O N N 200 HEC O2D O N N 201 HEC HHA H N N 202 HEC HHB H N N 203 HEC HHC H N N 204 HEC HHD H N N 205 HEC HMA1 H N N 206 HEC HMA2 H N N 207 HEC HMA3 H N N 208 HEC HAA1 H N N 209 HEC HAA2 H N N 210 HEC HBA1 H N N 211 HEC HBA2 H N N 212 HEC H2A H N N 213 HEC HMB1 H N N 214 HEC HMB2 H N N 215 HEC HMB3 H N N 216 HEC HAB H N N 217 HEC HBB1 H N N 218 HEC HBB2 H N N 219 HEC HBB3 H N N 220 HEC HMC1 H N N 221 HEC HMC2 H N N 222 HEC HMC3 H N N 223 HEC HAC H N N 224 HEC HBC1 H N N 225 HEC HBC2 H N N 226 HEC HBC3 H N N 227 HEC HMD1 H N N 228 HEC HMD2 H N N 229 HEC HMD3 H N N 230 HEC HAD1 H N N 231 HEC HAD2 H N N 232 HEC HBD1 H N N 233 HEC HBD2 H N N 234 HEC H2D H N N 235 HIS N N N N 236 HIS CA C N S 237 HIS C C N N 238 HIS O O N N 239 HIS CB C N N 240 HIS CG C Y N 241 HIS ND1 N Y N 242 HIS CD2 C Y N 243 HIS CE1 C Y N 244 HIS NE2 N Y N 245 HIS OXT O N N 246 HIS H H N N 247 HIS H2 H N N 248 HIS HA H N N 249 HIS HB2 H N N 250 HIS HB3 H N N 251 HIS HD1 H N N 252 HIS HD2 H N N 253 HIS HE1 H N N 254 HIS HE2 H N N 255 HIS HXT H N N 256 HOH O O N N 257 HOH H1 H N N 258 HOH H2 H N N 259 ILE N N N N 260 ILE CA C N S 261 ILE C C N N 262 ILE O O N N 263 ILE CB C N S 264 ILE CG1 C N N 265 ILE CG2 C N N 266 ILE CD1 C N N 267 ILE OXT O N N 268 ILE H H N N 269 ILE H2 H N N 270 ILE HA H N N 271 ILE HB H N N 272 ILE HG12 H N N 273 ILE HG13 H N N 274 ILE HG21 H N N 275 ILE HG22 H N N 276 ILE HG23 H N N 277 ILE HD11 H N N 278 ILE HD12 H N N 279 ILE HD13 H N N 280 ILE HXT H N N 281 LEU N N N N 282 LEU CA C N S 283 LEU C C N N 284 LEU O O N N 285 LEU CB C N N 286 LEU CG C N N 287 LEU CD1 C N N 288 LEU CD2 C N N 289 LEU OXT O N N 290 LEU H H N N 291 LEU H2 H N N 292 LEU HA H N N 293 LEU HB2 H N N 294 LEU HB3 H N N 295 LEU HG H N N 296 LEU HD11 H N N 297 LEU HD12 H N N 298 LEU HD13 H N N 299 LEU HD21 H N N 300 LEU HD22 H N N 301 LEU HD23 H N N 302 LEU HXT H N N 303 LYS N N N N 304 LYS CA C N S 305 LYS C C N N 306 LYS O O N N 307 LYS CB C N N 308 LYS CG C N N 309 LYS CD C N N 310 LYS CE C N N 311 LYS NZ N N N 312 LYS OXT O N N 313 LYS H H N N 314 LYS H2 H N N 315 LYS HA H N N 316 LYS HB2 H N N 317 LYS HB3 H N N 318 LYS HG2 H N N 319 LYS HG3 H N N 320 LYS HD2 H N N 321 LYS HD3 H N N 322 LYS HE2 H N N 323 LYS HE3 H N N 324 LYS HZ1 H N N 325 LYS HZ2 H N N 326 LYS HZ3 H N N 327 LYS HXT H N N 328 MET N N N N 329 MET CA C N S 330 MET C C N N 331 MET O O N N 332 MET CB C N N 333 MET CG C N N 334 MET SD S N N 335 MET CE C N N 336 MET OXT O N N 337 MET H H N N 338 MET H2 H N N 339 MET HA H N N 340 MET HB2 H N N 341 MET HB3 H N N 342 MET HG2 H N N 343 MET HG3 H N N 344 MET HE1 H N N 345 MET HE2 H N N 346 MET HE3 H N N 347 MET HXT H N N 348 PCA N N N N 349 PCA CA C N S 350 PCA CB C N N 351 PCA CG C N N 352 PCA CD C N N 353 PCA OE O N N 354 PCA C C N N 355 PCA O O N N 356 PCA OXT O N N 357 PCA H H N N 358 PCA HA H N N 359 PCA HB2 H N N 360 PCA HB3 H N N 361 PCA HG2 H N N 362 PCA HG3 H N N 363 PCA HXT H N N 364 PHE N N N N 365 PHE CA C N S 366 PHE C C N N 367 PHE O O N N 368 PHE CB C N N 369 PHE CG C Y N 370 PHE CD1 C Y N 371 PHE CD2 C Y N 372 PHE CE1 C Y N 373 PHE CE2 C Y N 374 PHE CZ C Y N 375 PHE OXT O N N 376 PHE H H N N 377 PHE H2 H N N 378 PHE HA H N N 379 PHE HB2 H N N 380 PHE HB3 H N N 381 PHE HD1 H N N 382 PHE HD2 H N N 383 PHE HE1 H N N 384 PHE HE2 H N N 385 PHE HZ H N N 386 PHE HXT H N N 387 PRO N N N N 388 PRO CA C N S 389 PRO C C N N 390 PRO O O N N 391 PRO CB C N N 392 PRO CG C N N 393 PRO CD C N N 394 PRO OXT O N N 395 PRO H H N N 396 PRO HA H N N 397 PRO HB2 H N N 398 PRO HB3 H N N 399 PRO HG2 H N N 400 PRO HG3 H N N 401 PRO HD2 H N N 402 PRO HD3 H N N 403 PRO HXT H N N 404 SER N N N N 405 SER CA C N S 406 SER C C N N 407 SER O O N N 408 SER CB C N N 409 SER OG O N N 410 SER OXT O N N 411 SER H H N N 412 SER H2 H N N 413 SER HA H N N 414 SER HB2 H N N 415 SER HB3 H N N 416 SER HG H N N 417 SER HXT H N N 418 SO4 S S N N 419 SO4 O1 O N N 420 SO4 O2 O N N 421 SO4 O3 O N N 422 SO4 O4 O N N 423 THR N N N N 424 THR CA C N S 425 THR C C N N 426 THR O O N N 427 THR CB C N R 428 THR OG1 O N N 429 THR CG2 C N N 430 THR OXT O N N 431 THR H H N N 432 THR H2 H N N 433 THR HA H N N 434 THR HB H N N 435 THR HG1 H N N 436 THR HG21 H N N 437 THR HG22 H N N 438 THR HG23 H N N 439 THR HXT H N N 440 TRP N N N N 441 TRP CA C N S 442 TRP C C N N 443 TRP O O N N 444 TRP CB C N N 445 TRP CG C Y N 446 TRP CD1 C Y N 447 TRP CD2 C Y N 448 TRP NE1 N Y N 449 TRP CE2 C Y N 450 TRP CE3 C Y N 451 TRP CZ2 C Y N 452 TRP CZ3 C Y N 453 TRP CH2 C Y N 454 TRP OXT O N N 455 TRP H H N N 456 TRP H2 H N N 457 TRP HA H N N 458 TRP HB2 H N N 459 TRP HB3 H N N 460 TRP HD1 H N N 461 TRP HE1 H N N 462 TRP HE3 H N N 463 TRP HZ2 H N N 464 TRP HZ3 H N N 465 TRP HH2 H N N 466 TRP HXT H N N 467 TYR N N N N 468 TYR CA C N S 469 TYR C C N N 470 TYR O O N N 471 TYR CB C N N 472 TYR CG C Y N 473 TYR CD1 C Y N 474 TYR CD2 C Y N 475 TYR CE1 C Y N 476 TYR CE2 C Y N 477 TYR CZ C Y N 478 TYR OH O N N 479 TYR OXT O N N 480 TYR H H N N 481 TYR H2 H N N 482 TYR HA H N N 483 TYR HB2 H N N 484 TYR HB3 H N N 485 TYR HD1 H N N 486 TYR HD2 H N N 487 TYR HE1 H N N 488 TYR HE2 H N N 489 TYR HH H N N 490 TYR HXT H N N 491 VAL N N N N 492 VAL CA C N S 493 VAL C C N N 494 VAL O O N N 495 VAL CB C N N 496 VAL CG1 C N N 497 VAL CG2 C N N 498 VAL OXT O N N 499 VAL H H N N 500 VAL H2 H N N 501 VAL HA H N N 502 VAL HB H N N 503 VAL HG11 H N N 504 VAL HG12 H N N 505 VAL HG13 H N N 506 VAL HG21 H N N 507 VAL HG22 H N N 508 VAL HG23 H N N 509 VAL HXT H N N 510 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASC C1 C2 sing N N 39 ASC C1 O1 doub N N 40 ASC C1 O4 sing N N 41 ASC C2 C3 doub N N 42 ASC C2 O2 sing N N 43 ASC C3 C4 sing N N 44 ASC C3 O3 sing N N 45 ASC C4 C5 sing N N 46 ASC C4 O4 sing N N 47 ASC C4 H4 sing N N 48 ASC C5 C6 sing N N 49 ASC C5 O5 sing N N 50 ASC C5 H5 sing N N 51 ASC C6 O6 sing N N 52 ASC C6 H61 sing N N 53 ASC C6 H62 sing N N 54 ASC O2 HO2 sing N N 55 ASC O3 HO3 sing N N 56 ASC O5 HO5 sing N N 57 ASC O6 HO6 sing N N 58 ASN N CA sing N N 59 ASN N H sing N N 60 ASN N H2 sing N N 61 ASN CA C sing N N 62 ASN CA CB sing N N 63 ASN CA HA sing N N 64 ASN C O doub N N 65 ASN C OXT sing N N 66 ASN CB CG sing N N 67 ASN CB HB2 sing N N 68 ASN CB HB3 sing N N 69 ASN CG OD1 doub N N 70 ASN CG ND2 sing N N 71 ASN ND2 HD21 sing N N 72 ASN ND2 HD22 sing N N 73 ASN OXT HXT sing N N 74 ASP N CA sing N N 75 ASP N H sing N N 76 ASP N H2 sing N N 77 ASP CA C sing N N 78 ASP CA CB sing N N 79 ASP CA HA sing N N 80 ASP C O doub N N 81 ASP C OXT sing N N 82 ASP CB CG sing N N 83 ASP CB HB2 sing N N 84 ASP CB HB3 sing N N 85 ASP CG OD1 doub N N 86 ASP CG OD2 sing N N 87 ASP OD2 HD2 sing N N 88 ASP OXT HXT sing N N 89 CMO C O trip N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HEC FE NA sing N N 150 HEC FE NB sing N N 151 HEC FE NC sing N N 152 HEC FE ND sing N N 153 HEC CHA C1A doub N N 154 HEC CHA C4D sing N N 155 HEC CHA HHA sing N N 156 HEC CHB C4A doub N N 157 HEC CHB C1B sing N N 158 HEC CHB HHB sing N N 159 HEC CHC C4B doub N N 160 HEC CHC C1C sing N N 161 HEC CHC HHC sing N N 162 HEC CHD C4C doub N N 163 HEC CHD C1D sing N N 164 HEC CHD HHD sing N N 165 HEC NA C1A sing Y N 166 HEC NA C4A sing Y N 167 HEC C1A C2A sing Y N 168 HEC C2A C3A doub Y N 169 HEC C2A CAA sing N N 170 HEC C3A C4A sing Y N 171 HEC C3A CMA sing N N 172 HEC CMA HMA1 sing N N 173 HEC CMA HMA2 sing N N 174 HEC CMA HMA3 sing N N 175 HEC CAA CBA sing N N 176 HEC CAA HAA1 sing N N 177 HEC CAA HAA2 sing N N 178 HEC CBA CGA sing N N 179 HEC CBA HBA1 sing N N 180 HEC CBA HBA2 sing N N 181 HEC CGA O1A doub N N 182 HEC CGA O2A sing N N 183 HEC O2A H2A sing N N 184 HEC NB C1B sing Y N 185 HEC NB C4B sing Y N 186 HEC C1B C2B doub Y N 187 HEC C2B C3B sing Y N 188 HEC C2B CMB sing N N 189 HEC C3B C4B sing Y N 190 HEC C3B CAB doub N E 191 HEC CMB HMB1 sing N N 192 HEC CMB HMB2 sing N N 193 HEC CMB HMB3 sing N N 194 HEC CAB CBB sing N N 195 HEC CAB HAB sing N N 196 HEC CBB HBB1 sing N N 197 HEC CBB HBB2 sing N N 198 HEC CBB HBB3 sing N N 199 HEC NC C1C sing Y N 200 HEC NC C4C sing Y N 201 HEC C1C C2C doub Y N 202 HEC C2C C3C sing Y N 203 HEC C2C CMC sing N N 204 HEC C3C C4C sing Y N 205 HEC C3C CAC doub N E 206 HEC CMC HMC1 sing N N 207 HEC CMC HMC2 sing N N 208 HEC CMC HMC3 sing N N 209 HEC CAC CBC sing N N 210 HEC CAC HAC sing N N 211 HEC CBC HBC1 sing N N 212 HEC CBC HBC2 sing N N 213 HEC CBC HBC3 sing N N 214 HEC ND C1D sing Y N 215 HEC ND C4D sing Y N 216 HEC C1D C2D doub Y N 217 HEC C2D C3D sing Y N 218 HEC C2D CMD sing N N 219 HEC C3D C4D doub Y N 220 HEC C3D CAD sing N N 221 HEC CMD HMD1 sing N N 222 HEC CMD HMD2 sing N N 223 HEC CMD HMD3 sing N N 224 HEC CAD CBD sing N N 225 HEC CAD HAD1 sing N N 226 HEC CAD HAD2 sing N N 227 HEC CBD CGD sing N N 228 HEC CBD HBD1 sing N N 229 HEC CBD HBD2 sing N N 230 HEC CGD O1D doub N N 231 HEC CGD O2D sing N N 232 HEC O2D H2D sing N N 233 HIS N CA sing N N 234 HIS N H sing N N 235 HIS N H2 sing N N 236 HIS CA C sing N N 237 HIS CA CB sing N N 238 HIS CA HA sing N N 239 HIS C O doub N N 240 HIS C OXT sing N N 241 HIS CB CG sing N N 242 HIS CB HB2 sing N N 243 HIS CB HB3 sing N N 244 HIS CG ND1 sing Y N 245 HIS CG CD2 doub Y N 246 HIS ND1 CE1 doub Y N 247 HIS ND1 HD1 sing N N 248 HIS CD2 NE2 sing Y N 249 HIS CD2 HD2 sing N N 250 HIS CE1 NE2 sing Y N 251 HIS CE1 HE1 sing N N 252 HIS NE2 HE2 sing N N 253 HIS OXT HXT sing N N 254 HOH O H1 sing N N 255 HOH O H2 sing N N 256 ILE N CA sing N N 257 ILE N H sing N N 258 ILE N H2 sing N N 259 ILE CA C sing N N 260 ILE CA CB sing N N 261 ILE CA HA sing N N 262 ILE C O doub N N 263 ILE C OXT sing N N 264 ILE CB CG1 sing N N 265 ILE CB CG2 sing N N 266 ILE CB HB sing N N 267 ILE CG1 CD1 sing N N 268 ILE CG1 HG12 sing N N 269 ILE CG1 HG13 sing N N 270 ILE CG2 HG21 sing N N 271 ILE CG2 HG22 sing N N 272 ILE CG2 HG23 sing N N 273 ILE CD1 HD11 sing N N 274 ILE CD1 HD12 sing N N 275 ILE CD1 HD13 sing N N 276 ILE OXT HXT sing N N 277 LEU N CA sing N N 278 LEU N H sing N N 279 LEU N H2 sing N N 280 LEU CA C sing N N 281 LEU CA CB sing N N 282 LEU CA HA sing N N 283 LEU C O doub N N 284 LEU C OXT sing N N 285 LEU CB CG sing N N 286 LEU CB HB2 sing N N 287 LEU CB HB3 sing N N 288 LEU CG CD1 sing N N 289 LEU CG CD2 sing N N 290 LEU CG HG sing N N 291 LEU CD1 HD11 sing N N 292 LEU CD1 HD12 sing N N 293 LEU CD1 HD13 sing N N 294 LEU CD2 HD21 sing N N 295 LEU CD2 HD22 sing N N 296 LEU CD2 HD23 sing N N 297 LEU OXT HXT sing N N 298 LYS N CA sing N N 299 LYS N H sing N N 300 LYS N H2 sing N N 301 LYS CA C sing N N 302 LYS CA CB sing N N 303 LYS CA HA sing N N 304 LYS C O doub N N 305 LYS C OXT sing N N 306 LYS CB CG sing N N 307 LYS CB HB2 sing N N 308 LYS CB HB3 sing N N 309 LYS CG CD sing N N 310 LYS CG HG2 sing N N 311 LYS CG HG3 sing N N 312 LYS CD CE sing N N 313 LYS CD HD2 sing N N 314 LYS CD HD3 sing N N 315 LYS CE NZ sing N N 316 LYS CE HE2 sing N N 317 LYS CE HE3 sing N N 318 LYS NZ HZ1 sing N N 319 LYS NZ HZ2 sing N N 320 LYS NZ HZ3 sing N N 321 LYS OXT HXT sing N N 322 MET N CA sing N N 323 MET N H sing N N 324 MET N H2 sing N N 325 MET CA C sing N N 326 MET CA CB sing N N 327 MET CA HA sing N N 328 MET C O doub N N 329 MET C OXT sing N N 330 MET CB CG sing N N 331 MET CB HB2 sing N N 332 MET CB HB3 sing N N 333 MET CG SD sing N N 334 MET CG HG2 sing N N 335 MET CG HG3 sing N N 336 MET SD CE sing N N 337 MET CE HE1 sing N N 338 MET CE HE2 sing N N 339 MET CE HE3 sing N N 340 MET OXT HXT sing N N 341 PCA N CA sing N N 342 PCA N CD sing N N 343 PCA N H sing N N 344 PCA CA CB sing N N 345 PCA CA C sing N N 346 PCA CA HA sing N N 347 PCA CB CG sing N N 348 PCA CB HB2 sing N N 349 PCA CB HB3 sing N N 350 PCA CG CD sing N N 351 PCA CG HG2 sing N N 352 PCA CG HG3 sing N N 353 PCA CD OE doub N N 354 PCA C O doub N N 355 PCA C OXT sing N N 356 PCA OXT HXT sing N N 357 PHE N CA sing N N 358 PHE N H sing N N 359 PHE N H2 sing N N 360 PHE CA C sing N N 361 PHE CA CB sing N N 362 PHE CA HA sing N N 363 PHE C O doub N N 364 PHE C OXT sing N N 365 PHE CB CG sing N N 366 PHE CB HB2 sing N N 367 PHE CB HB3 sing N N 368 PHE CG CD1 doub Y N 369 PHE CG CD2 sing Y N 370 PHE CD1 CE1 sing Y N 371 PHE CD1 HD1 sing N N 372 PHE CD2 CE2 doub Y N 373 PHE CD2 HD2 sing N N 374 PHE CE1 CZ doub Y N 375 PHE CE1 HE1 sing N N 376 PHE CE2 CZ sing Y N 377 PHE CE2 HE2 sing N N 378 PHE CZ HZ sing N N 379 PHE OXT HXT sing N N 380 PRO N CA sing N N 381 PRO N CD sing N N 382 PRO N H sing N N 383 PRO CA C sing N N 384 PRO CA CB sing N N 385 PRO CA HA sing N N 386 PRO C O doub N N 387 PRO C OXT sing N N 388 PRO CB CG sing N N 389 PRO CB HB2 sing N N 390 PRO CB HB3 sing N N 391 PRO CG CD sing N N 392 PRO CG HG2 sing N N 393 PRO CG HG3 sing N N 394 PRO CD HD2 sing N N 395 PRO CD HD3 sing N N 396 PRO OXT HXT sing N N 397 SER N CA sing N N 398 SER N H sing N N 399 SER N H2 sing N N 400 SER CA C sing N N 401 SER CA CB sing N N 402 SER CA HA sing N N 403 SER C O doub N N 404 SER C OXT sing N N 405 SER CB OG sing N N 406 SER CB HB2 sing N N 407 SER CB HB3 sing N N 408 SER OG HG sing N N 409 SER OXT HXT sing N N 410 SO4 S O1 doub N N 411 SO4 S O2 doub N N 412 SO4 S O3 sing N N 413 SO4 S O4 sing N N 414 THR N CA sing N N 415 THR N H sing N N 416 THR N H2 sing N N 417 THR CA C sing N N 418 THR CA CB sing N N 419 THR CA HA sing N N 420 THR C O doub N N 421 THR C OXT sing N N 422 THR CB OG1 sing N N 423 THR CB CG2 sing N N 424 THR CB HB sing N N 425 THR OG1 HG1 sing N N 426 THR CG2 HG21 sing N N 427 THR CG2 HG22 sing N N 428 THR CG2 HG23 sing N N 429 THR OXT HXT sing N N 430 TRP N CA sing N N 431 TRP N H sing N N 432 TRP N H2 sing N N 433 TRP CA C sing N N 434 TRP CA CB sing N N 435 TRP CA HA sing N N 436 TRP C O doub N N 437 TRP C OXT sing N N 438 TRP CB CG sing N N 439 TRP CB HB2 sing N N 440 TRP CB HB3 sing N N 441 TRP CG CD1 doub Y N 442 TRP CG CD2 sing Y N 443 TRP CD1 NE1 sing Y N 444 TRP CD1 HD1 sing N N 445 TRP CD2 CE2 doub Y N 446 TRP CD2 CE3 sing Y N 447 TRP NE1 CE2 sing Y N 448 TRP NE1 HE1 sing N N 449 TRP CE2 CZ2 sing Y N 450 TRP CE3 CZ3 doub Y N 451 TRP CE3 HE3 sing N N 452 TRP CZ2 CH2 doub Y N 453 TRP CZ2 HZ2 sing N N 454 TRP CZ3 CH2 sing Y N 455 TRP CZ3 HZ3 sing N N 456 TRP CH2 HH2 sing N N 457 TRP OXT HXT sing N N 458 TYR N CA sing N N 459 TYR N H sing N N 460 TYR N H2 sing N N 461 TYR CA C sing N N 462 TYR CA CB sing N N 463 TYR CA HA sing N N 464 TYR C O doub N N 465 TYR C OXT sing N N 466 TYR CB CG sing N N 467 TYR CB HB2 sing N N 468 TYR CB HB3 sing N N 469 TYR CG CD1 doub Y N 470 TYR CG CD2 sing Y N 471 TYR CD1 CE1 sing Y N 472 TYR CD1 HD1 sing N N 473 TYR CD2 CE2 doub Y N 474 TYR CD2 HD2 sing N N 475 TYR CE1 CZ doub Y N 476 TYR CE1 HE1 sing N N 477 TYR CE2 CZ sing Y N 478 TYR CE2 HE2 sing N N 479 TYR CZ OH sing N N 480 TYR OH HH sing N N 481 TYR OXT HXT sing N N 482 VAL N CA sing N N 483 VAL N H sing N N 484 VAL N H2 sing N N 485 VAL CA C sing N N 486 VAL CA CB sing N N 487 VAL CA HA sing N N 488 VAL C O doub N N 489 VAL C OXT sing N N 490 VAL CB CG1 sing N N 491 VAL CB CG2 sing N N 492 VAL CB HB sing N N 493 VAL CG1 HG11 sing N N 494 VAL CG1 HG12 sing N N 495 VAL CG1 HG13 sing N N 496 VAL CG2 HG21 sing N N 497 VAL CG2 HG22 sing N N 498 VAL CG2 HG23 sing N N 499 VAL OXT HXT sing N N 500 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YL0 _pdbx_initial_refinement_model.details 'PDB ENTRY 2YL0' # _atom_sites.entry_id 2YLG _atom_sites.fract_transf_matrix[1][1] 0.018643 _atom_sites.fract_transf_matrix[1][2] 0.010763 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021527 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005511 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE H N O S # loop_