HEADER TRANSFERASE 06-JUN-11 2YM7 TITLE CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH TITLE 2 INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE CHK1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 1-289; COMPND 5 SYNONYM: CHECKPOINT KINASE 1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9 KEYWDS TRANSFERASE, DNA REPAIR, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR J.C.READER,T.P.MATTHEWS,S.KLAIR,K.M.J.CHEUNG,J.SCANLON,N.PROISY, AUTHOR 2 G.ADDISON,J.ELLARD,N.PITON,S.TAYLOR,M.CHERRY,M.FISHER,K.BOXALL, AUTHOR 3 S.BURNS,M.I.WALTON,I.M.WESTWOOD,A.HAYES,P.EVE,M.VALENTI,A.H.BRANDON, AUTHOR 4 G.BOX,R.L.M.VANMONTFORT,D.H.WILLIAMS,G.W.AHERNE,F.I.RAYNAUD, AUTHOR 5 S.A.ECCLES,M.D.GARRETT,I.COLLINS REVDAT 3 20-DEC-23 2YM7 1 REMARK REVDAT 2 28-JUN-17 2YM7 1 REMARK REVDAT 1 11-JAN-12 2YM7 0 JRNL AUTH J.C.READER,T.P.MATTHEWS,S.KLAIR,K.M.J.CHEUNG,J.SCANLON, JRNL AUTH 2 N.PROISY,G.ADDISON,J.ELLARD,N.PITON,S.TAYLOR,M.CHERRY, JRNL AUTH 3 M.FISHER,K.BOXALL,S.BURNS,M.I.WALTON,I.M.WESTWOOD,A.HAYES, JRNL AUTH 4 P.EVE,M.VALENTI,A.DE HAVEN BRANDON,G.BOX,R.L.M.VAN MONTFORT, JRNL AUTH 5 D.H.WILLIAMS,G.W.AHERNE,F.I.RAYNAUD,S.A.ECCLES,M.D.GARRETT, JRNL AUTH 6 I.COLLINS JRNL TITL STRUCTURE-GUIDED EVOLUTION OF POTENT AND SELECTIVE CHK1 JRNL TITL 2 INHIBITORS THROUGH SCAFFOLD MORPHING. JRNL REF J.MED.CHEM. V. 54 8328 2011 JRNL REFN ISSN 0022-2623 JRNL PMID 22111927 JRNL DOI 10.1021/JM2007326 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.P.MATTHEWS,S.KLAIR,S.BURNS,K.BOXALL,M.CHERRY,M.FISHER, REMARK 1 AUTH 2 I.M.WESTWOOD,M.I.WALTON,T.MCHARDY,K.-M.J.CHEUNG, REMARK 1 AUTH 3 R.VAN MONTFORT,D.WILLIAMS,G.W.AHERNE,M.D.GARRETT,J.READER, REMARK 1 AUTH 4 I.COLLINS REMARK 1 TITL IDENTIFICATION OF INHIBITORS OF CHECKPOINT KINASE 1 THROUGH REMARK 1 TITL 2 TEMPLATE SCREENING REMARK 1 REF J.MED.CHEM. V. 52 4810 2009 REMARK 1 REFN ISSN 0022-2623 REMARK 1 PMID 19572549 REMARK 1 DOI 10.1021/JM900314J REMARK 1 REFERENCE 2 REMARK 1 AUTH T.P.MATTHEWS,T.MCHARDY,S.KLAIR,K.BOXALL,M.FISHER,M.CHERRY, REMARK 1 AUTH 2 C.E.ALLEN,G.J.ADDISON,J.ELLARD,G.W.AHERNE,I.M.WESTWOOD, REMARK 1 AUTH 3 R.L.M.VAN MONTFORT,M.D.GARRETT,J.C.READER,I.COLLINS REMARK 1 TITL DESIGN AND EVALUATION OF 3,6-DI(HETERO)ARYL REMARK 1 TITL 2 IMIDAZO(1,2-A)PYRAZINES AS INHIBITORS OF CHECKPOINT AND REMARK 1 TITL 3 OTHER KINASES REMARK 1 REF BIOORG.MED.CHEM.LETT. V. 20 4045 2010 REMARK 1 REFN ISSN 0960-894X REMARK 1 PMID 20561787 REMARK 1 DOI 10.1016/J.BMCL.2010.05.096 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.300 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.1 REMARK 3 NUMBER OF REFLECTIONS : 52393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2572 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2470 - 4.7422 0.83 2614 145 0.1854 0.1852 REMARK 3 2 4.7422 - 3.7656 0.85 2668 165 0.1303 0.1754 REMARK 3 3 3.7656 - 3.2900 0.85 2693 169 0.1501 0.1764 REMARK 3 4 3.2900 - 2.9894 0.86 2713 136 0.1571 0.2330 REMARK 3 5 2.9894 - 2.7752 0.86 2712 183 0.1549 0.1623 REMARK 3 6 2.7752 - 2.6117 0.87 2730 138 0.1529 0.1749 REMARK 3 7 2.6117 - 2.4809 0.87 2781 154 0.1665 0.2183 REMARK 3 8 2.4809 - 2.3729 0.87 2792 135 0.1610 0.1991 REMARK 3 9 2.3729 - 2.2816 0.88 2808 123 0.1624 0.2063 REMARK 3 10 2.2816 - 2.2029 0.88 2809 126 0.1674 0.2082 REMARK 3 11 2.2029 - 2.1340 0.88 2783 145 0.1782 0.2326 REMARK 3 12 2.1340 - 2.0730 0.88 2838 148 0.1768 0.2107 REMARK 3 13 2.0730 - 2.0185 0.89 2821 148 0.1831 0.2514 REMARK 3 14 2.0185 - 1.9692 0.89 2856 124 0.2110 0.2070 REMARK 3 15 1.9692 - 1.9245 0.89 2838 130 0.2432 0.3007 REMARK 3 16 1.9245 - 1.8835 0.89 2831 138 0.2921 0.3062 REMARK 3 17 1.8835 - 1.8458 0.89 2879 132 0.3357 0.3816 REMARK 3 18 1.8458 - 1.8110 0.85 2655 133 0.3764 0.3867 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.42 REMARK 3 B_SOL : 51.57 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.87310 REMARK 3 B22 (A**2) : 2.29520 REMARK 3 B33 (A**2) : 0.57790 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.23660 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2162 REMARK 3 ANGLE : 1.004 2919 REMARK 3 CHIRALITY : 0.068 313 REMARK 3 PLANARITY : 0.005 369 REMARK 3 DIHEDRAL : 14.237 833 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 7:51) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7293 -1.5232 0.1800 REMARK 3 T TENSOR REMARK 3 T11: 0.4887 T22: 0.4352 REMARK 3 T33: 0.1422 T12: -0.0657 REMARK 3 T13: -0.0006 T23: -0.0603 REMARK 3 L TENSOR REMARK 3 L11: 0.1241 L22: 0.2318 REMARK 3 L33: 0.2150 L12: 0.1105 REMARK 3 L13: -0.1605 L23: -0.1727 REMARK 3 S TENSOR REMARK 3 S11: 0.1489 S12: 0.2292 S13: 0.0028 REMARK 3 S21: 0.2390 S22: -0.0130 S23: 0.0007 REMARK 3 S31: 0.2203 S32: 0.0466 S33: -0.0795 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 52:85) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7759 2.1898 10.4777 REMARK 3 T TENSOR REMARK 3 T11: 0.2770 T22: 0.5086 REMARK 3 T33: 0.0064 T12: -0.1241 REMARK 3 T13: -0.1009 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.2182 L22: 0.0634 REMARK 3 L33: 0.0322 L12: -0.0476 REMARK 3 L13: -0.0553 L23: 0.0005 REMARK 3 S TENSOR REMARK 3 S11: -0.0472 S12: 0.6773 S13: 0.2391 REMARK 3 S21: -0.3095 S22: -0.0293 S23: 0.0998 REMARK 3 S31: 0.0263 S32: -0.3395 S33: -0.0058 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 86:103) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3465 2.8031 17.2198 REMARK 3 T TENSOR REMARK 3 T11: 0.2119 T22: 0.2526 REMARK 3 T33: 0.1670 T12: -0.0000 REMARK 3 T13: 0.0588 T23: -0.0491 REMARK 3 L TENSOR REMARK 3 L11: 0.6334 L22: 1.1710 REMARK 3 L33: 0.4210 L12: 0.2886 REMARK 3 L13: -0.3271 L23: 0.3394 REMARK 3 S TENSOR REMARK 3 S11: -0.1128 S12: 0.4363 S13: -0.1224 REMARK 3 S21: -0.1947 S22: 0.0844 S23: -0.3902 REMARK 3 S31: 0.0772 S32: -0.0766 S33: -0.0140 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 104:161) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1029 7.6826 22.1434 REMARK 3 T TENSOR REMARK 3 T11: 0.1231 T22: 0.1041 REMARK 3 T33: 0.1060 T12: 0.0015 REMARK 3 T13: -0.0130 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.6430 L22: 0.5860 REMARK 3 L33: 0.2212 L12: 0.1440 REMARK 3 L13: 0.1514 L23: 0.1580 REMARK 3 S TENSOR REMARK 3 S11: -0.0809 S12: 0.1455 S13: 0.0800 REMARK 3 S21: -0.1522 S22: 0.0337 S23: 0.0743 REMARK 3 S31: -0.0491 S32: -0.0354 S33: -0.0263 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 162:185) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5614 -3.0761 34.7026 REMARK 3 T TENSOR REMARK 3 T11: 0.1450 T22: 0.1487 REMARK 3 T33: 0.1733 T12: -0.0106 REMARK 3 T13: 0.0251 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.1875 L22: 0.5669 REMARK 3 L33: 0.7029 L12: 0.2928 REMARK 3 L13: -0.1704 L23: -0.2185 REMARK 3 S TENSOR REMARK 3 S11: -0.0828 S12: -0.0316 S13: -0.1727 REMARK 3 S21: 0.0572 S22: 0.0231 S23: 0.0900 REMARK 3 S31: 0.1468 S32: -0.1437 S33: 0.0352 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 186:255) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9953 2.8172 36.8910 REMARK 3 T TENSOR REMARK 3 T11: 0.1172 T22: 0.1601 REMARK 3 T33: 0.1371 T12: 0.0041 REMARK 3 T13: -0.0089 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 0.2323 L22: 0.3784 REMARK 3 L33: 0.2990 L12: 0.2658 REMARK 3 L13: -0.0551 L23: -0.1601 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: -0.2407 S13: -0.1014 REMARK 3 S21: 0.0422 S22: -0.0733 S23: -0.0990 REMARK 3 S31: -0.0241 S32: 0.0882 S33: 0.0385 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 256:271) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0999 18.7006 30.0982 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1080 REMARK 3 T33: 0.2582 T12: 0.0112 REMARK 3 T13: 0.0441 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.0956 L22: 0.1179 REMARK 3 L33: 0.1214 L12: -0.0451 REMARK 3 L13: -0.0303 L23: 0.1010 REMARK 3 S TENSOR REMARK 3 S11: 0.0847 S12: -0.0136 S13: 0.3266 REMARK 3 S21: 0.0258 S22: -0.0635 S23: -0.2287 REMARK 3 S31: -0.1386 S32: 0.0415 S33: -0.0626 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 1-6, 17-21, 41-50, 77, 78, 272 REMARK 3 -289 ARE DISORDERED REMARK 4 REMARK 4 2YM7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1290048553. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29617 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 36.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2WMW REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: DL-MALIC ACID/PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.85500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 VAL A 3 REMARK 465 PRO A 4 REMARK 465 PHE A 5 REMARK 465 VAL A 6 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 ALA A 19 REMARK 465 TYR A 20 REMARK 465 GLY A 21 REMARK 465 ASP A 41 REMARK 465 MET A 42 REMARK 465 LYS A 43 REMARK 465 ARG A 44 REMARK 465 ALA A 45 REMARK 465 VAL A 46 REMARK 465 ASP A 47 REMARK 465 CYS A 48 REMARK 465 PRO A 49 REMARK 465 GLU A 50 REMARK 465 GLY A 77 REMARK 465 ASN A 78 REMARK 465 GLY A 272 REMARK 465 ALA A 273 REMARK 465 LYS A 274 REMARK 465 ARG A 275 REMARK 465 PRO A 276 REMARK 465 ARG A 277 REMARK 465 VAL A 278 REMARK 465 THR A 279 REMARK 465 SER A 280 REMARK 465 GLY A 281 REMARK 465 GLY A 282 REMARK 465 VAL A 283 REMARK 465 SER A 284 REMARK 465 GLU A 285 REMARK 465 SER A 286 REMARK 465 PRO A 287 REMARK 465 SER A 288 REMARK 465 GLY A 289 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 180 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 99 -2.62 71.06 REMARK 500 ARG A 129 -7.11 79.62 REMARK 500 ASP A 130 47.00 -152.21 REMARK 500 ASP A 130 47.00 -147.89 REMARK 500 ASP A 148 94.15 75.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2017 DISTANCE = 6.00 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YM7 A 1272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE YM7 A 1273 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1275 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1277 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XF0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2BRB RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 2X8D RELATED DB: PDB REMARK 900 DISCOVERY OF A NOVEL CLASS OF TRIAZOLONES AS CHECKPOINT KINASE REMARK 900 INHIBITORS - HIT TO LEAD EXPLORATION REMARK 900 RELATED ID: 2WMR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2CGV RELATED DB: PDB REMARK 900 IDENTIFICATION OF CHEMICALLY DIVERSE CHK1 INHIBITORS BY RECEPTOR- REMARK 900 BASED VIRTUAL SCREENING REMARK 900 RELATED ID: 2BRN RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 2WMX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2YER RELATED DB: PDB REMARK 900 SYNTHESIS AND EVALUATION OF TRIAZOLONES AS CHECKPOINT KINASE 1 REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2AYP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHK1 WITH AN INDOL INHIBITOR REMARK 900 RELATED ID: 2CGU RELATED DB: PDB REMARK 900 IDENTIFICATION OF CHEMICALLY DIVERSE CHK1 INHIBITORS BY RECEPTOR- REMARK 900 BASED VIRTUAL SCREENING REMARK 900 RELATED ID: 1NVS RELATED DB: PDB REMARK 900 THE COMPLEX STRUCTURE OF CHECKPOINT KINASE CHK1/SB218078 REMARK 900 RELATED ID: 2YDJ RELATED DB: PDB REMARK 900 DISCOVERY OF CHECKPOINT KINASE INHIBITOR AZD7762 BY STRUCTURE BASED REMARK 900 DESIGN AND OPTIMIZATION OF THIOPHENE CARBOXAMIDE UREAS REMARK 900 RELATED ID: 1NVQ RELATED DB: PDB REMARK 900 THE COMPLEX STRUCTURE OF CHECKPOINT KINASE CHK1/UCN-01 REMARK 900 RELATED ID: 2BRM RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 2YM5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2YDI RELATED DB: PDB REMARK 900 DISCOVERY OF CHECKPOINT KINASE INHIBITOR AZD7762 BY STRUCTURE BASED REMARK 900 DESIGN AND OPTIMIZATION OF THIOPHENE CARBOXAMIDE UREAS REMARK 900 RELATED ID: 2WMT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2CGX RELATED DB: PDB REMARK 900 IDENTIFICATION OF CHEMICALLY DIVERSE CHK1 INHIBITORS BY RECEPTOR- REMARK 900 BASED VIRTUAL SCREENING REMARK 900 RELATED ID: 2C3J RELATED DB: PDB REMARK 900 IDENTIFICATION OF A BURIED POCKET FOR POTENT AND SELECTIVE REMARK 900 INHIBITION OF CHK1: PREDICTION AND VERIFICATION REMARK 900 RELATED ID: 2BRO RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 2WMW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2WMU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2BRH RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 2X8E RELATED DB: PDB REMARK 900 DISCOVERY OF A NOVEL CLASS OF TRIAZOLONES AS CHECKPOINT KINASE REMARK 900 INHIBITORS - HIT TO LEAD EXPLORATION REMARK 900 RELATED ID: 1NVR RELATED DB: PDB REMARK 900 THE COMPLEX STRUCTURE OF CHECKPOINT KINASECHK1/ STAUROSPORINE REMARK 900 RELATED ID: 2C3K RELATED DB: PDB REMARK 900 IDENTIFICATION OF A BURIED POCKET FOR POTENT AND SELECTIVE REMARK 900 INHIBITION OF CHK1: PREDICTION AND VERIFICATION REMARK 900 RELATED ID: 2WMQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2YM4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2CGW RELATED DB: PDB REMARK 900 IDENTIFICATION OF CHEMICALLY DIVERSE CHK1 INHIBITORS BY RECEPTOR- REMARK 900 BASED VIRTUAL SCREENING REMARK 900 RELATED ID: 1ZLT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHK1 COMPLEXED WITH A HYMENALDISINEANALOG REMARK 900 RELATED ID: 2YEX RELATED DB: PDB REMARK 900 SYNTHESIS AND EVALUATION OF TRIAZOLONES AS CHECKPOINT KINASE 1 REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2YM3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2XEZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 1ZYS RELATED DB: PDB REMARK 900 CO-CRYSTAL STRUCTURE OF CHECKPOINT KINASE CHK1 WITH APYRROLO- REMARK 900 PYRIDINE INHIBITOR REMARK 900 RELATED ID: 2BR1 RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 1IA8 RELATED DB: PDB REMARK 900 THE 1.7 A CRYSTAL STRUCTURE OF HUMAN CELL CYCLE CHECKPOINTKINASE REMARK 900 CHK1 REMARK 900 RELATED ID: 2BRG RELATED DB: PDB REMARK 900 STRUCTURE-BASED DESIGN OF NOVEL CHK1 INHIBITORS: INSIGHTS INTO REMARK 900 HYDROGEN BONDING AND PROTEIN-LIGAND AFFINITY REMARK 900 RELATED ID: 2YDK RELATED DB: PDB REMARK 900 DISCOVERY OF CHECKPOINT KINASE INHIBITOR AZD7762 BY STRUCTURE BASED REMARK 900 DESIGN AND OPTIMIZATION OF THIOPHENE CARBOXAMIDE UREAS REMARK 900 RELATED ID: 2WMV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2WMS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2X8I RELATED DB: PDB REMARK 900 DISCOVERY OF A NOVEL CLASS OF TRIAZOLONES AS CHECKPOINT KINASE REMARK 900 INHIBITORS - HIT TO LEAD EXPLORATION REMARK 900 RELATED ID: 2C3L RELATED DB: PDB REMARK 900 IDENTIFICATION OF A BURIED POCKET FOR POTENT AND SELECTIVE REMARK 900 INHIBITION OF CHK1: PREDICTION AND VERIFICATION REMARK 900 RELATED ID: 2XEY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2YM8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS REMARK 900 RELATED ID: 2YM6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHECKPOINT KINASE 1 (CHK1) IN COMPLEX WITH REMARK 900 INHIBITORS DBREF 2YM7 A 1 289 UNP O14757 CHK1_HUMAN 1 289 SEQRES 1 A 289 MET ALA VAL PRO PHE VAL GLU ASP TRP ASP LEU VAL GLN SEQRES 2 A 289 THR LEU GLY GLU GLY ALA TYR GLY GLU VAL GLN LEU ALA SEQRES 3 A 289 VAL ASN ARG VAL THR GLU GLU ALA VAL ALA VAL LYS ILE SEQRES 4 A 289 VAL ASP MET LYS ARG ALA VAL ASP CYS PRO GLU ASN ILE SEQRES 5 A 289 LYS LYS GLU ILE CYS ILE ASN LYS MET LEU ASN HIS GLU SEQRES 6 A 289 ASN VAL VAL LYS PHE TYR GLY HIS ARG ARG GLU GLY ASN SEQRES 7 A 289 ILE GLN TYR LEU PHE LEU GLU TYR CYS SER GLY GLY GLU SEQRES 8 A 289 LEU PHE ASP ARG ILE GLU PRO ASP ILE GLY MET PRO GLU SEQRES 9 A 289 PRO ASP ALA GLN ARG PHE PHE HIS GLN LEU MET ALA GLY SEQRES 10 A 289 VAL VAL TYR LEU HIS GLY ILE GLY ILE THR HIS ARG ASP SEQRES 11 A 289 ILE LYS PRO GLU ASN LEU LEU LEU ASP GLU ARG ASP ASN SEQRES 12 A 289 LEU LYS ILE SER ASP PHE GLY LEU ALA THR VAL PHE ARG SEQRES 13 A 289 TYR ASN ASN ARG GLU ARG LEU LEU ASN LYS MET CYS GLY SEQRES 14 A 289 THR LEU PRO TYR VAL ALA PRO GLU LEU LEU LYS ARG ARG SEQRES 15 A 289 GLU PHE HIS ALA GLU PRO VAL ASP VAL TRP SER CYS GLY SEQRES 16 A 289 ILE VAL LEU THR ALA MET LEU ALA GLY GLU LEU PRO TRP SEQRES 17 A 289 ASP GLN PRO SER ASP SER CYS GLN GLU TYR SER ASP TRP SEQRES 18 A 289 LYS GLU LYS LYS THR TYR LEU ASN PRO TRP LYS LYS ILE SEQRES 19 A 289 ASP SER ALA PRO LEU ALA LEU LEU HIS LYS ILE LEU VAL SEQRES 20 A 289 GLU ASN PRO SER ALA ARG ILE THR ILE PRO ASP ILE LYS SEQRES 21 A 289 LYS ASP ARG TRP TYR ASN LYS PRO LEU LYS LYS GLY ALA SEQRES 22 A 289 LYS ARG PRO ARG VAL THR SER GLY GLY VAL SER GLU SER SEQRES 23 A 289 PRO SER GLY HET YM7 A1272 23 HET YM7 A1273 23 HET EDO A1274 4 HET EDO A1275 4 HET EDO A1276 4 HET EDO A1277 4 HETNAM YM7 5-({6-[(PIPERIDIN-4-YLMETHYL)AMINO]PYRIMIDIN-4- HETNAM 2 YM7 YL}AMINO)PYRAZINE-2-CARBONITRILE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 YM7 2(C15 H18 N8) FORMUL 4 EDO 4(C2 H6 O2) FORMUL 8 HOH *248(H2 O) HELIX 1 1 ASN A 51 LEU A 62 1 12 HELIX 2 2 PHE A 93 ILE A 96 5 4 HELIX 3 3 PRO A 103 ILE A 124 1 22 HELIX 4 4 LYS A 132 GLU A 134 5 3 HELIX 5 5 THR A 170 VAL A 174 5 5 HELIX 6 6 ALA A 175 ARG A 181 1 7 HELIX 7 7 HIS A 185 GLY A 204 1 20 HELIX 8 8 CYS A 215 GLU A 223 1 9 HELIX 9 9 PRO A 230 ILE A 234 5 5 HELIX 10 10 ASP A 235 LEU A 246 1 12 HELIX 11 11 THR A 255 LYS A 260 1 6 SHEET 1 AA 5 TRP A 9 THR A 14 0 SHEET 2 AA 5 VAL A 23 ASN A 28 -1 O LEU A 25 N VAL A 12 SHEET 3 AA 5 ALA A 34 VAL A 40 -1 O VAL A 35 N ALA A 26 SHEET 4 AA 5 GLN A 80 GLU A 85 -1 O GLN A 80 N VAL A 40 SHEET 5 AA 5 PHE A 70 ARG A 75 -1 N TYR A 71 O PHE A 83 SHEET 1 AB 3 GLY A 90 GLU A 91 0 SHEET 2 AB 3 LEU A 136 LEU A 138 -1 N LEU A 138 O GLY A 90 SHEET 3 AB 3 LEU A 144 ILE A 146 -1 O LYS A 145 N LEU A 137 SHEET 1 AC 2 ILE A 126 THR A 127 0 SHEET 2 AC 2 THR A 153 VAL A 154 -1 O THR A 153 N THR A 127 SHEET 1 AD 2 ARG A 156 TYR A 157 0 SHEET 2 AD 2 ARG A 160 GLU A 161 -1 O ARG A 160 N TYR A 157 CISPEP 1 ASN A 229 PRO A 230 0 1.88 SITE 1 AC1 15 LEU A 15 ALA A 36 LYS A 38 LEU A 84 SITE 2 AC1 15 GLU A 85 TYR A 86 CYS A 87 GLU A 91 SITE 3 AC1 15 GLU A 134 LEU A 137 SER A 147 ASP A 148 SITE 4 AC1 15 HOH A2005 HOH A2243 HOH A2244 SITE 1 AC2 6 TRP A 9 GLU A 33 ALA A 34 TYR A 71 SITE 2 AC2 6 ARG A 74 PHE A 83 SITE 1 AC3 3 ARG A 29 LEU A 163 GLU A 183 SITE 1 AC4 5 LYS A 132 GLU A 134 THR A 170 HOH A2050 SITE 2 AC4 5 HOH A2245 SITE 1 AC5 3 HIS A 243 LEU A 246 HOH A2221 SITE 1 AC6 2 HOH A2172 HOH A2246 CRYST1 44.940 65.710 57.940 90.00 94.14 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022252 0.000000 0.001611 0.00000 SCALE2 0.000000 0.015218 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017304 0.00000