HEADER MEMBRANE PROTEIN 17-OCT-12 2YNQ TITLE CRYSTAL STRUCTURE OF GEOBACILLUS THERMODENITRIFICANS ESSB TITLE 2 EXTRACELLULAR FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESSB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN, RESIDUES 241-397; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 420246; SOURCE 4 STRAIN: NG80-2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET27 (MODIFIED); SOURCE 10 OTHER_DETAILS: SYNTHETIC GENE KEYWDS MEMBRANE PROTEIN, SECRETION, ESS, TYPE V, SECRETION SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.ZOLTNER,P.K.FYFE,W.N.HUNTER REVDAT 2 13-NOV-13 2YNQ 1 JRNL REVDAT 1 05-DEC-12 2YNQ 0 JRNL AUTH M.ZOLTNER,D.G.NORMAN,P.K.FYFE,H.EL MKAMI,T.PALMER, JRNL AUTH 2 W.N.HUNTER JRNL TITL THE ARCHITECTURE OF ESSB, AN INTEGRAL MEMBRANE COMPONENT OF JRNL TITL 2 THE TYPE VII SECRETION SYSTEM. JRNL REF STRUCTURE V. 21 595 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23499020 JRNL DOI 10.1016/J.STR.2013.02.007 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 94.782 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.145 REMARK 3 NUMBER OF REFLECTIONS : 52094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.1862 REMARK 3 FREE R VALUE : 0.2215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.12 REMARK 3 FREE R VALUE TEST SET COUNT : 2642 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.4 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.462 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3649 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.248 REMARK 3 BIN R VALUE (WORKING SET) : 0.294 REMARK 3 BIN FREE R VALUE SET COUNT : 203 REMARK 3 BIN FREE R VALUE : 0.342 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5171 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.6 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.064 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.188 REMARK 3 B22 (A**2) : -0.335 REMARK 3 B33 (A**2) : -0.108 REMARK 3 B12 (A**2) : 0.000 REMARK 3 B13 (A**2) : -1.366 REMARK 3 B23 (A**2) : 0.000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.204 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.965 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5276 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7129 ; 1.202 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 627 ; 4.768 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 300 ;39.311 ;25.967 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1039 ;16.875 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;17.626 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 772 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4044 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2471 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3632 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 298 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 10 ; 0.119 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 69 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3099 ; 0.565 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5045 ; 1.134 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2177 ; 1.842 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2084 ; 3.113 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 242 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): 20.3624 0.2418 47.5808 REMARK 3 T TENSOR REMARK 3 T11: 0.1663 T22: 0.1453 REMARK 3 T33: 0.1865 T12: -0.1104 REMARK 3 T13: 0.0114 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 2.8683 L22: 2.0739 REMARK 3 L33: 3.9196 L12: 0.6257 REMARK 3 L13: 1.1111 L23: -0.1663 REMARK 3 S TENSOR REMARK 3 S11: 0.0457 S12: -0.3798 S13: 0.2347 REMARK 3 S21: 0.3156 S22: -0.2001 S23: 0.3431 REMARK 3 S31: -0.1078 S32: -0.3867 S33: 0.1544 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 292 A 376 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9498 -6.9081 31.6068 REMARK 3 T TENSOR REMARK 3 T11: 0.1589 T22: 0.1058 REMARK 3 T33: 0.1804 T12: 0.0015 REMARK 3 T13: -0.0201 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 2.0297 L22: 1.9968 REMARK 3 L33: 1.6025 L12: 1.4634 REMARK 3 L13: 1.5269 L23: 0.8772 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: -0.1907 S13: 0.2878 REMARK 3 S21: 0.0194 S22: -0.1485 S23: 0.3763 REMARK 3 S31: -0.0705 S32: -0.1793 S33: 0.1170 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 377 A 390 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6514 -12.8247 10.9636 REMARK 3 T TENSOR REMARK 3 T11: 0.3048 T22: 0.0872 REMARK 3 T33: 0.3561 T12: -0.1210 REMARK 3 T13: -0.0097 T23: -0.0606 REMARK 3 L TENSOR REMARK 3 L11: 7.5131 L22: 3.0770 REMARK 3 L33: 27.6315 L12: -2.3876 REMARK 3 L13: -1.3752 L23: 8.9615 REMARK 3 S TENSOR REMARK 3 S11: 0.3478 S12: 0.3533 S13: 0.2259 REMARK 3 S21: -0.4111 S22: 0.1253 S23: -0.2617 REMARK 3 S31: -1.0964 S32: 0.5665 S33: -0.4731 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 348 REMARK 3 ORIGIN FOR THE GROUP (A): 2.9648 -46.5919 41.9279 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.0909 REMARK 3 T33: 0.1050 T12: 0.0229 REMARK 3 T13: -0.0016 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.1613 L22: 1.0089 REMARK 3 L33: 1.4136 L12: -0.2530 REMARK 3 L13: 0.5867 L23: -0.0955 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: 0.1460 S13: -0.0424 REMARK 3 S21: -0.0756 S22: 0.0044 S23: -0.0640 REMARK 3 S31: 0.1035 S32: 0.0763 S33: 0.0298 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 349 B 373 REMARK 3 ORIGIN FOR THE GROUP (A): -19.5591 -35.6275 35.6716 REMARK 3 T TENSOR REMARK 3 T11: 0.2304 T22: 0.2846 REMARK 3 T33: 0.7827 T12: 0.2443 REMARK 3 T13: 0.1897 T23: 0.2772 REMARK 3 L TENSOR REMARK 3 L11: 4.4982 L22: 27.6504 REMARK 3 L33: 5.6352 L12: -4.8468 REMARK 3 L13: 0.0809 L23: 5.5017 REMARK 3 S TENSOR REMARK 3 S11: 0.2407 S12: 0.4025 S13: 1.3043 REMARK 3 S21: -0.3650 S22: -0.2973 S23: 1.3896 REMARK 3 S31: -1.0365 S32: -1.0344 S33: 0.0567 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 374 B 389 REMARK 3 ORIGIN FOR THE GROUP (A): -21.4969 -59.6453 33.7993 REMARK 3 T TENSOR REMARK 3 T11: 1.2391 T22: 0.6209 REMARK 3 T33: 0.7235 T12: -0.2327 REMARK 3 T13: -0.1542 T23: 0.3046 REMARK 3 L TENSOR REMARK 3 L11: 21.0557 L22: 0.4717 REMARK 3 L33: -2.0683 L12: 11.5002 REMARK 3 L13: -0.4238 L23: -0.6504 REMARK 3 S TENSOR REMARK 3 S11: -1.7986 S12: 3.4654 S13: 0.1054 REMARK 3 S21: -0.3929 S22: 1.8767 S23: 0.4560 REMARK 3 S31: 0.3219 S32: -0.1000 S33: -0.0781 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 241 C 340 REMARK 3 ORIGIN FOR THE GROUP (A): 11.9689 -27.4944 -5.1558 REMARK 3 T TENSOR REMARK 3 T11: 0.0898 T22: 0.1182 REMARK 3 T33: 0.0853 T12: 0.0129 REMARK 3 T13: -0.0156 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 2.5731 L22: 1.7301 REMARK 3 L33: 2.4681 L12: 0.2493 REMARK 3 L13: 0.3153 L23: 0.0572 REMARK 3 S TENSOR REMARK 3 S11: 0.0403 S12: 0.0190 S13: -0.0150 REMARK 3 S21: 0.0005 S22: 0.0040 S23: -0.2069 REMARK 3 S31: -0.0223 S32: 0.3018 S33: -0.0443 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 341 C 370 REMARK 3 ORIGIN FOR THE GROUP (A): 24.4762 -28.9718 14.4468 REMARK 3 T TENSOR REMARK 3 T11: 0.1232 T22: 0.3250 REMARK 3 T33: 0.2154 T12: 0.0853 REMARK 3 T13: 0.0211 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 2.1535 L22: 3.0129 REMARK 3 L33: 7.9723 L12: -0.1237 REMARK 3 L13: 2.8519 L23: -3.7268 REMARK 3 S TENSOR REMARK 3 S11: 0.0541 S12: 0.0499 S13: -0.4692 REMARK 3 S21: -0.3496 S22: 0.0840 S23: -0.3370 REMARK 3 S31: 0.5483 S32: 0.1573 S33: -0.1380 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 371 C 389 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2090 -8.6842 12.8525 REMARK 3 T TENSOR REMARK 3 T11: 0.6597 T22: 0.5027 REMARK 3 T33: 0.8211 T12: -0.3568 REMARK 3 T13: -0.5289 T23: 0.0856 REMARK 3 L TENSOR REMARK 3 L11: 4.1594 L22: 1.0650 REMARK 3 L33: 8.6278 L12: -2.1281 REMARK 3 L13: -6.9943 L23: 4.7280 REMARK 3 S TENSOR REMARK 3 S11: 0.4894 S12: -0.0689 S13: 0.8253 REMARK 3 S21: -0.6277 S22: 0.5200 S23: -0.1788 REMARK 3 S31: -1.2805 S32: 0.4378 S33: -1.0094 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 0 D 348 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6520 -28.7993 26.7726 REMARK 3 T TENSOR REMARK 3 T11: 0.1661 T22: 0.1349 REMARK 3 T33: 0.1348 T12: 0.0005 REMARK 3 T13: -0.0271 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.3853 L22: 0.8935 REMARK 3 L33: 1.8225 L12: -0.1536 REMARK 3 L13: 1.0576 L23: 0.1340 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: 0.0571 S13: -0.0280 REMARK 3 S21: -0.0236 S22: -0.0139 S23: -0.0961 REMARK 3 S31: 0.0611 S32: 0.0038 S33: -0.0090 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 349 D 375 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1483 -25.0752 47.0892 REMARK 3 T TENSOR REMARK 3 T11: 0.8982 T22: 0.4349 REMARK 3 T33: 0.1549 T12: -0.3843 REMARK 3 T13: 0.0127 T23: -0.1021 REMARK 3 L TENSOR REMARK 3 L11: 9.6128 L22: 0.9252 REMARK 3 L33: 21.7508 L12: -1.3790 REMARK 3 L13: -6.6085 L23: -0.5212 REMARK 3 S TENSOR REMARK 3 S11: 0.2900 S12: -1.6131 S13: -0.0359 REMARK 3 S21: 0.8411 S22: -0.0989 S23: 0.0990 REMARK 3 S31: -0.9505 S32: 0.8096 S33: -0.1911 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 376 D 390 REMARK 3 ORIGIN FOR THE GROUP (A): 34.9033 -22.2850 26.2221 REMARK 3 T TENSOR REMARK 3 T11: 0.1820 T22: 0.5993 REMARK 3 T33: 0.4392 T12: -0.2017 REMARK 3 T13: 0.1163 T23: -0.1231 REMARK 3 L TENSOR REMARK 3 L11: 25.7415 L22: 8.2276 REMARK 3 L33: 22.8382 L12: 12.9058 REMARK 3 L13: -19.3932 L23: -14.3071 REMARK 3 S TENSOR REMARK 3 S11: 0.1201 S12: 1.0849 S13: -0.8419 REMARK 3 S21: 0.1749 S22: -0.5231 S23: -0.3621 REMARK 3 S31: -0.5827 S32: 1.2554 S33: 0.4030 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.400 REMARK 3 ION PROBE RADIUS : 0.800 REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2YNQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-OCT-12. REMARK 100 THE PDBE ID CODE IS EBI-52569. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52114 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.40 REMARK 200 RESOLUTION RANGE LOW (A) : 29.46 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.6 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.7 REMARK 200 R MERGE FOR SHELL (I) : 0.44 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.0 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3 M MALONATE PH7.0, 10 MM ZNCL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.44500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.44500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 55.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -22.47532 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 94.78169 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 43.96968 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 55.31000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 94.78169 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL C1392 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 SER A -1 REMARK 465 THR A 0 REMARK 465 ALA A 241 REMARK 465 GLU A 391 REMARK 465 GLN A 392 REMARK 465 GLN A 393 REMARK 465 SER A 394 REMARK 465 GLU A 395 REMARK 465 GLN A 396 REMARK 465 GLN A 397 REMARK 465 GLY B -3 REMARK 465 ALA B -2 REMARK 465 GLU B 391 REMARK 465 GLU B 392 REMARK 465 GLN B 393 REMARK 465 GLN B 394 REMARK 465 SER B 395 REMARK 465 GLU B 396 REMARK 465 GLN B 397 REMARK 465 GLN B 8 REMARK 465 GLY C -3 REMARK 465 ALA C -2 REMARK 465 SER C -1 REMARK 465 THR C 0 REMARK 465 GLU C 390 REMARK 465 GLU C 391 REMARK 465 GLN C 392 REMARK 465 GLN C 393 REMARK 465 SER C 394 REMARK 465 GLU C 395 REMARK 465 GLN C 396 REMARK 465 GLN C 397 REMARK 465 GLY D -3 REMARK 465 ALA D -2 REMARK 465 SER D -1 REMARK 465 GLU D 391 REMARK 465 GLN D 392 REMARK 465 GLN D 393 REMARK 465 SER D 394 REMARK 465 GLU D 395 REMARK 465 GLN D 396 REMARK 465 GLN D 397 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B -1 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD B GLU B 330 NZ B LYS D 244 1.97 REMARK 500 OE1B GLU B 330 NZ B LYS D 244 1.99 REMARK 500 OE2B GLU B 330 NZ B LYS D 244 2.18 REMARK 500 OE2 GLU D 273 OH TYR D 319 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1A GLN C 245 OE1B GLN D 245 2555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 322 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 324 66.38 -101.49 REMARK 500 ASP B 355 103.26 -50.21 REMARK 500 SER B 359 -147.89 -67.77 REMARK 500 GLN B 387 -72.06 -128.33 REMARK 500 GLN C 324 62.02 -111.30 REMARK 500 GLN D 324 65.51 -109.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1392 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 302 O REMARK 620 2 HOH A2017 O 89.8 REMARK 620 3 ILE A 305 O 78.8 93.6 REMARK 620 4 HOH A2026 O 88.2 96.2 163.6 REMARK 620 5 HOH A2025 O 91.0 173.2 93.2 77.1 REMARK 620 6 MLI A1391 O7 161.7 105.5 90.1 99.9 75.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1393 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2051 O REMARK 620 2 GLN A 372 OE1 74.7 REMARK 620 3 GLN D 257 O 82.9 86.3 REMARK 620 4 HOH A2050 O 152.7 89.6 73.8 REMARK 620 5 HOH A2070 O 92.6 97.5 173.1 111.8 REMARK 620 6 HOH A2071 O 77.3 151.7 94.7 118.0 79.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1391 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 302 O REMARK 620 2 ILE B 305 O 82.3 REMARK 620 3 HOH B2043 O 102.7 94.0 REMARK 620 4 HOH B2042 O 88.9 170.3 84.0 REMARK 620 5 HOH B2033 O 82.3 88.7 174.5 94.0 REMARK 620 6 MLI B1390 O7 166.3 84.5 74.9 104.1 100.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C1391 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C2028 O REMARK 620 2 HOH C2015 O 93.5 REMARK 620 3 SER C 302 O 90.3 101.4 REMARK 620 4 ILE C 305 O 175.5 90.1 86.4 REMARK 620 5 MLI C1390 O7 94.6 95.9 161.6 87.6 REMARK 620 6 HOH C2029 O 83.9 171.0 87.3 92.9 75.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D1391 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 303 OD1 REMARK 620 2 VAL D 301 O 83.8 REMARK 620 3 HOH D2026 O 135.1 77.8 REMARK 620 4 HOH D2027 O 74.7 78.5 61.8 REMARK 620 5 ARG D 298 O 100.1 97.9 122.6 173.9 REMARK 620 6 HOH D2025 O 94.0 160.9 90.8 82.6 101.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI B1390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B1391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA D1391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI A1391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLI C1390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C1391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1392 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1393 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1394 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1392 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1392 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D1392 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ANO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE GEOBACILLUS THERMODENITRIFICANS ESSB REMARK 900 CYTOPLASMIC FRAGMENT DBREF 2YNQ A 241 397 UNP A4IKE6 A4IKE6_GEOTN 241 397 DBREF 2YNQ B 241 397 UNP A4IKE6 A4IKE6_GEOTN 241 397 DBREF 2YNQ C 241 397 UNP A4IKE6 A4IKE6_GEOTN 241 397 DBREF 2YNQ D 241 397 UNP A4IKE6 A4IKE6_GEOTN 241 397 SEQADV 2YNQ GLY A -3 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ ALA A -2 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ SER A -1 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ THR A 0 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ GLY B -3 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ ALA B -2 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ SER B -1 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ THR B 0 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ GLY C -3 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ ALA C -2 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ SER C -1 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ THR C 0 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ GLY D -3 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ ALA D -2 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ SER D -1 UNP A4IKE6 EXPRESSION TAG SEQADV 2YNQ THR D 0 UNP A4IKE6 EXPRESSION TAG SEQRES 1 A 161 GLY ALA SER THR ALA GLN PRO LYS GLN GLU ALA TYR ILE SEQRES 2 A 161 GLN SER THR GLU LEU PHE LEU GLN ASN LYS TYR SER ASP SEQRES 3 A 161 VAL ILE THR THR LEU GLU ASP TYR ALA PRO GLU ASP MET SEQRES 4 A 161 PRO TYR VAL ILE GLN TYR GLU LEU ALA SER SER TYR VAL SEQRES 5 A 161 MET THR GLU SER LEU THR GLU GLU GLN ARG GLN THR VAL SEQRES 6 A 161 SER ASN ASN ILE THR LEU LYS THR ASP GLU GLN TYR MET SEQRES 7 A 161 LEU TYR TRP ILE TYR ILE GLY ARG SER GLN SER GLU GLU SEQRES 8 A 161 ALA LEU GLU LEU ALA ARG THR ILE GLU ASP ARG ASP LEU SEQRES 9 A 161 ILE VAL TYR ALA LEU LEU LYS TYR ARG GLU GLN ILE LYS SEQRES 10 A 161 GLY ASP THR ASP LEU SER GLY ASP GLU LYS GLN LYS LYS SEQRES 11 A 161 LEU ASP GLU ILE ASP GLN GLU ILE LYS GLU TYR GLU ARG SEQRES 12 A 161 GLU ARG LYS GLU SER GLU ALA GLN LEU GLU GLU GLU GLN SEQRES 13 A 161 GLN SER GLU GLN GLN SEQRES 1 B 161 GLY ALA SER THR ALA GLN PRO LYS GLN GLU ALA TYR ILE SEQRES 2 B 161 GLN SER THR GLU LEU PHE LEU GLN ASN LYS TYR SER ASP SEQRES 3 B 161 VAL ILE THR THR LEU GLU ASP TYR ALA PRO GLU ASP MET SEQRES 4 B 161 PRO TYR VAL ILE GLN TYR GLU LEU ALA SER SER TYR VAL SEQRES 5 B 161 MET THR GLU SER LEU THR GLU GLU GLN ARG GLN THR VAL SEQRES 6 B 161 SER ASN ASN ILE THR LEU LYS THR ASP GLU GLN TYR MET SEQRES 7 B 161 LEU TYR TRP ILE TYR ILE GLY ARG SER GLN SER GLU GLU SEQRES 8 B 161 ALA LEU GLU LEU ALA ARG THR ILE GLU ASP ARG ASP LEU SEQRES 9 B 161 ILE VAL TYR ALA LEU LEU LYS TYR ARG GLU GLN ILE LYS SEQRES 10 B 161 GLY ASP THR ASP LEU SER GLY ASP GLU LYS GLN LYS LYS SEQRES 11 B 161 LEU ASP GLU ILE ASP GLN GLU ILE LYS GLU TYR GLU ARG SEQRES 12 B 161 GLU ARG LYS GLU SER GLU ALA GLN LEU GLU GLU GLU GLN SEQRES 13 B 161 GLN SER GLU GLN GLN SEQRES 1 C 161 GLY ALA SER THR ALA GLN PRO LYS GLN GLU ALA TYR ILE SEQRES 2 C 161 GLN SER THR GLU LEU PHE LEU GLN ASN LYS TYR SER ASP SEQRES 3 C 161 VAL ILE THR THR LEU GLU ASP TYR ALA PRO GLU ASP MET SEQRES 4 C 161 PRO TYR VAL ILE GLN TYR GLU LEU ALA SER SER TYR VAL SEQRES 5 C 161 MET THR GLU SER LEU THR GLU GLU GLN ARG GLN THR VAL SEQRES 6 C 161 SER ASN ASN ILE THR LEU LYS THR ASP GLU GLN TYR MET SEQRES 7 C 161 LEU TYR TRP ILE TYR ILE GLY ARG SER GLN SER GLU GLU SEQRES 8 C 161 ALA LEU GLU LEU ALA ARG THR ILE GLU ASP ARG ASP LEU SEQRES 9 C 161 ILE VAL TYR ALA LEU LEU LYS TYR ARG GLU GLN ILE LYS SEQRES 10 C 161 GLY ASP THR ASP LEU SER GLY ASP GLU LYS GLN LYS LYS SEQRES 11 C 161 LEU ASP GLU ILE ASP GLN GLU ILE LYS GLU TYR GLU ARG SEQRES 12 C 161 GLU ARG LYS GLU SER GLU ALA GLN LEU GLU GLU GLU GLN SEQRES 13 C 161 GLN SER GLU GLN GLN SEQRES 1 D 161 GLY ALA SER THR ALA GLN PRO LYS GLN GLU ALA TYR ILE SEQRES 2 D 161 GLN SER THR GLU LEU PHE LEU GLN ASN LYS TYR SER ASP SEQRES 3 D 161 VAL ILE THR THR LEU GLU ASP TYR ALA PRO GLU ASP MET SEQRES 4 D 161 PRO TYR VAL ILE GLN TYR GLU LEU ALA SER SER TYR VAL SEQRES 5 D 161 MET THR GLU SER LEU THR GLU GLU GLN ARG GLN THR VAL SEQRES 6 D 161 SER ASN ASN ILE THR LEU LYS THR ASP GLU GLN TYR MET SEQRES 7 D 161 LEU TYR TRP ILE TYR ILE GLY ARG SER GLN SER GLU GLU SEQRES 8 D 161 ALA LEU GLU LEU ALA ARG THR ILE GLU ASP ARG ASP LEU SEQRES 9 D 161 ILE VAL TYR ALA LEU LEU LYS TYR ARG GLU GLN ILE LYS SEQRES 10 D 161 GLY ASP THR ASP LEU SER GLY ASP GLU LYS GLN LYS LYS SEQRES 11 D 161 LEU ASP GLU ILE ASP GLN GLU ILE LYS GLU TYR GLU ARG SEQRES 12 D 161 GLU ARG LYS GLU SER GLU ALA GLN LEU GLU GLU GLU GLN SEQRES 13 D 161 GLN SER GLU GLN GLN HET MLI B1390 7 HET NA B1391 1 HET NA D1391 1 HET MLI A1391 7 HET MLI C1390 7 HET NA C1391 1 HET NA A1392 1 HET NA A1393 1 HET CL A1394 1 HET CL B1392 1 HET CL C1392 1 HET GOL D1392 6 HETNAM MLI MALONATE ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 MLI 3(C3 H2 O4 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 7 CL 3(CL 1-) FORMUL 8 NA 5(NA 1+) FORMUL 9 HOH *246(H2 O) HELIX 1 1 GLN A 242 GLN A 257 1 15 HELIX 2 2 TYR A 260 GLU A 268 1 9 HELIX 3 3 PRO A 272 ASP A 274 5 3 HELIX 4 4 PRO A 276 THR A 290 1 15 HELIX 5 5 GLU A 295 ILE A 305 1 11 HELIX 6 6 GLU A 311 ARG A 322 1 12 HELIX 7 7 SER A 325 ILE A 335 1 13 HELIX 8 8 ARG A 338 ASP A 355 1 18 HELIX 9 9 GLY A 360 ALA A 386 1 27 HELIX 10 1 GLN B 242 GLN B 257 1 15 HELIX 11 2 TYR B 260 GLU B 268 1 9 HELIX 12 3 PRO B 272 ASP B 274 5 3 HELIX 13 4 PRO B 276 THR B 290 1 15 HELIX 14 5 GLU B 295 ILE B 305 1 11 HELIX 15 6 GLU B 311 ARG B 322 1 12 HELIX 16 7 SER B 325 ILE B 335 1 13 HELIX 17 8 ARG B 338 ASP B 355 1 18 HELIX 18 9 GLY B 360 ALA B 386 1 27 HELIX 19 1 GLN C 242 GLN C 257 1 15 HELIX 20 2 TYR C 260 GLU C 268 1 9 HELIX 21 3 PRO C 272 ASP C 274 5 3 HELIX 22 4 PRO C 276 THR C 290 1 15 HELIX 23 5 GLU C 295 ILE C 305 1 11 HELIX 24 6 GLU C 311 ARG C 322 1 12 HELIX 25 7 SER C 325 ILE C 335 1 13 HELIX 26 8 ARG C 338 ASP C 355 1 18 HELIX 27 9 GLY C 360 ALA C 386 1 27 HELIX 28 1 GLN D 242 GLN D 257 1 15 HELIX 29 2 TYR D 260 GLU D 268 1 9 HELIX 30 3 PRO D 272 ASP D 274 5 3 HELIX 31 4 PRO D 276 THR D 290 1 15 HELIX 32 5 GLU D 295 ILE D 305 1 11 HELIX 33 6 GLU D 311 ARG D 322 1 12 HELIX 34 7 SER D 325 ILE D 335 1 13 HELIX 35 8 ARG D 338 ASP D 355 1 18 HELIX 36 9 GLY D 360 ALA D 386 1 27 LINK O7 MLI A1391 NA NA A1392 1555 1555 2.45 LINK NA NA A1392 O SER A 302 1555 1555 2.45 LINK NA NA A1392 O HOH A2017 1555 1555 2.26 LINK NA NA A1392 O ILE A 305 1555 1555 2.35 LINK NA NA A1392 O HOH A2026 1555 1555 2.23 LINK NA NA A1392 O HOH A2025 1555 1555 2.62 LINK NA NA A1393 O HOH A2051 1555 1555 2.69 LINK NA NA A1393 OE1 GLN A 372 1555 1555 2.55 LINK NA NA A1393 O GLN D 257 1555 1555 2.54 LINK NA NA A1393 O HOH A2050 1555 1555 3.13 LINK NA NA A1393 O HOH A2070 1555 1555 2.41 LINK NA NA A1393 O HOH A2071 1555 1555 2.47 LINK O7 MLI B1390 NA NA B1391 1555 1555 2.38 LINK NA NA B1391 O HOH B2042 1555 1555 2.43 LINK NA NA B1391 O SER B 302 1555 1555 2.39 LINK NA NA B1391 O ILE B 305 1555 1555 2.36 LINK NA NA B1391 O HOH B2043 1555 1555 2.64 LINK NA NA B1391 O HOH B2033 1555 1555 2.47 LINK O7 MLI C1390 NA NA C1391 1555 1555 2.72 LINK NA NA C1391 O HOH C2015 1555 1555 2.35 LINK NA NA C1391 O SER C 302 1555 1555 2.49 LINK NA NA C1391 O ILE C 305 1555 1555 2.41 LINK NA NA C1391 O HOH C2029 1555 1555 2.49 LINK NA NA C1391 O HOH C2028 1555 1555 2.19 LINK NA NA D1391 O VAL D 301 1555 1555 2.44 LINK NA NA D1391 O HOH D2026 1555 1555 2.48 LINK NA NA D1391 O HOH D2027 1555 1555 2.96 LINK NA NA D1391 O ARG D 298 1555 1555 2.25 LINK NA NA D1391 O HOH D2025 1555 1555 2.47 LINK NA NA D1391 OD1 ASN D 303 1555 1555 2.64 CISPEP 1 GLU A 389 GLU A 390 0 -8.07 SITE 1 AC1 9 LEU A 256 GLN A 257 TYR B 281 ILE B 305 SITE 2 AC1 9 THR B 306 LEU B 307 NA B1391 HOH B2043 SITE 3 AC1 9 HOH B2070 SITE 1 AC2 6 SER B 302 ILE B 305 MLI B1390 HOH B2033 SITE 2 AC2 6 HOH B2042 HOH B2043 SITE 1 AC3 6 ARG D 298 VAL D 301 ASN D 303 HOH D2025 SITE 2 AC3 6 HOH D2026 HOH D2027 SITE 1 AC4 9 TYR A 281 ILE A 305 THR A 306 LEU A 307 SITE 2 AC4 9 NA A1392 HOH A2025 HOH A2066 HOH A2067 SITE 3 AC4 9 HOH A2068 SITE 1 AC5 10 HOH A2051 TYR C 281 ILE C 305 THR C 306 SITE 2 AC5 10 LEU C 307 NA C1391 HOH C2029 HOH C2058 SITE 3 AC5 10 HOH C2060 LEU D 256 SITE 1 AC6 6 SER C 302 ILE C 305 MLI C1390 HOH C2015 SITE 2 AC6 6 HOH C2028 HOH C2029 SITE 1 AC7 6 SER A 302 ILE A 305 MLI A1391 HOH A2017 SITE 2 AC7 6 HOH A2025 HOH A2026 SITE 1 AC8 5 GLN A 372 HOH A2051 HOH A2070 HOH A2071 SITE 2 AC8 5 GLN D 257 SITE 1 AC9 2 ARG A 349 HOH A2044 SITE 1 BC1 3 SER B 261 ARG B 349 LYS B 353 SITE 1 BC2 2 TYR C 260 SER C 261 SITE 1 BC3 7 TRP A 317 ASP A 339 LEU A 340 TYR A 343 SITE 2 BC3 7 THR D 294 GLU D 295 GLU D 296 CRYST1 132.890 110.620 97.410 90.00 103.34 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007525 0.000000 0.001784 0.00000 SCALE2 0.000000 0.009040 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010551 0.00000