HEADER VIRAL PROTEIN 02-NOV-12 2YQ0 TITLE KSHV LANA (ORF73) C-TERMINAL DOMAIN, OCTAMERIC RING: CUBIC CRYSTAL TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF 73; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 996-1153; COMPND 5 SYNONYM: KSHV LANA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 8 TYPE M; SOURCE 3 ORGANISM_TAXID: 435895; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET BASED KEYWDS VIRAL PROTEIN, LATENCY-ASSOCIATED NUCLEAR ANTIGEN, LANA-1, DNA- KEYWDS 2 BINDING DOMAIN, ORIGIN-BINDING DOMAIN, OLIGOMERIZATION DOMAIN, KEYWDS 3 KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS, GAMMAHERPESVIRUS, KEYWDS 4 RHADINOVIRUS, PRIMARY EFFUSION LYMPHOMA, MULTICENTRIC CASTLEMAN'S KEYWDS 5 DISEASE, TUMOR VIRUS, CANCER, MURID HERPESVIRUS 4, MUHV-4, MURID KEYWDS 6 HERPESVIRUS 68, MHV-68 EXPDTA X-RAY DIFFRACTION AUTHOR J.HELLERT,J.KRAUSZE,T.LUHRS REVDAT 5 20-DEC-23 2YQ0 1 REMARK REVDAT 4 08-MAY-19 2YQ0 1 REMARK REVDAT 3 03-APR-19 2YQ0 1 REMARK REVDAT 2 29-JAN-14 2YQ0 1 REMARK HELIX SHEET REVDAT 1 13-NOV-13 2YQ0 0 JRNL AUTH J.HELLERT,M.WEIDNER-GLUNDE,J.KRAUSZE,U.RICHTER,H.ADLER, JRNL AUTH 2 R.FEDOROV,M.PIETREK,J.RUCKERT,C.RITTER,T.F.SCHULZ,T.LUHRS JRNL TITL A STRUCTURAL BASIS FOR BRD2/4-MEDIATED HOST CHROMATIN JRNL TITL 2 INTERACTION AND OLIGOMER ASSEMBLY OF KAPOSI JRNL TITL 3 SARCOMA-ASSOCIATED HERPESVIRUS AND MURINE GAMMAHERPESVIRUS JRNL TITL 4 LANA PROTEINS. JRNL REF PLOS PATHOG. V. 9 3640 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 24146614 JRNL DOI 10.1371/JOURNAL.PPAT.1003640 REMARK 2 REMARK 2 RESOLUTION. 3.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 2178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.262 REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.317 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.9641 - 3.9113 1.00 2069 109 0.2595 0.3166 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 140.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 198.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 980 REMARK 3 ANGLE : 0.746 1324 REMARK 3 CHIRALITY : 0.054 134 REMARK 3 PLANARITY : 0.003 167 REMARK 3 DIHEDRAL : 12.361 366 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1024 THROUGH 1046 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5958 45.0591 17.1916 REMARK 3 T TENSOR REMARK 3 T11: 2.3971 T22: 1.6566 REMARK 3 T33: 1.8590 T12: -0.2906 REMARK 3 T13: -0.3451 T23: 0.4925 REMARK 3 L TENSOR REMARK 3 L11: 2.0683 L22: 2.2428 REMARK 3 L33: 3.7960 L12: -7.0726 REMARK 3 L13: -7.1164 L23: 2.8576 REMARK 3 S TENSOR REMARK 3 S11: -0.3168 S12: 0.1546 S13: 0.9849 REMARK 3 S21: 0.6095 S22: -0.8652 S23: -4.8672 REMARK 3 S31: 0.9520 S32: 0.8025 S33: 0.3543 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 1047 THROUGH 1055 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6348 44.4171 34.2914 REMARK 3 T TENSOR REMARK 3 T11: 1.9875 T22: 1.9720 REMARK 3 T33: 2.5240 T12: -0.0845 REMARK 3 T13: -0.1272 T23: 0.3120 REMARK 3 L TENSOR REMARK 3 L11: 2.0488 L22: 2.0212 REMARK 3 L33: 2.1209 L12: 0.8679 REMARK 3 L13: -0.1748 L23: -5.6869 REMARK 3 S TENSOR REMARK 3 S11: -2.4106 S12: 2.1089 S13: 1.3541 REMARK 3 S21: 1.1208 S22: -0.1514 S23: -2.6331 REMARK 3 S31: 0.7010 S32: 0.7926 S33: 4.3885 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 1056 THROUGH 1089 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8523 36.6282 23.8304 REMARK 3 T TENSOR REMARK 3 T11: 2.1903 T22: 1.2271 REMARK 3 T33: 1.3229 T12: -0.4958 REMARK 3 T13: -0.1584 T23: 0.0375 REMARK 3 L TENSOR REMARK 3 L11: 2.3309 L22: 2.9316 REMARK 3 L33: 2.7727 L12: -0.3265 REMARK 3 L13: -4.9409 L23: -0.7656 REMARK 3 S TENSOR REMARK 3 S11: 2.0715 S12: 0.4839 S13: -1.6660 REMARK 3 S21: 1.7104 S22: -0.5104 S23: -1.0188 REMARK 3 S31: -1.4051 S32: -1.6211 S33: -1.6134 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 1090 THROUGH 1099 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7558 28.4066 27.2438 REMARK 3 T TENSOR REMARK 3 T11: 2.9601 T22: 2.2703 REMARK 3 T33: 1.2885 T12: 0.4846 REMARK 3 T13: 0.0825 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 2.0045 L22: 1.8617 REMARK 3 L33: 1.9432 L12: -5.0673 REMARK 3 L13: -5.1694 L23: 1.9231 REMARK 3 S TENSOR REMARK 3 S11: -0.9043 S12: 2.4707 S13: -2.1892 REMARK 3 S21: -4.8149 S22: -1.5003 S23: 1.1129 REMARK 3 S31: 7.7426 S32: 2.9804 S33: 2.8986 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 1100 THROUGH 1138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7469 44.6853 25.8393 REMARK 3 T TENSOR REMARK 3 T11: 1.9136 T22: 1.0246 REMARK 3 T33: 1.4837 T12: -0.2957 REMARK 3 T13: -0.0062 T23: 0.2858 REMARK 3 L TENSOR REMARK 3 L11: 4.7844 L22: 2.7391 REMARK 3 L33: 6.1119 L12: -3.3338 REMARK 3 L13: -0.9294 L23: 0.9978 REMARK 3 S TENSOR REMARK 3 S11: -0.6445 S12: -0.8845 S13: 0.0143 REMARK 3 S21: 0.3820 S22: -0.0039 S23: 0.5034 REMARK 3 S31: 0.5877 S32: -1.3788 S33: 0.6089 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 1139 THROUGH 1146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6993 36.1534 39.3960 REMARK 3 T TENSOR REMARK 3 T11: 2.3765 T22: 2.3392 REMARK 3 T33: 1.9366 T12: -0.5761 REMARK 3 T13: -0.4372 T23: -0.0961 REMARK 3 L TENSOR REMARK 3 L11: 2.0573 L22: 2.0668 REMARK 3 L33: 8.3456 L12: -8.8696 REMARK 3 L13: -4.1102 L23: 0.8796 REMARK 3 S TENSOR REMARK 3 S11: -0.3133 S12: 6.1045 S13: -1.6222 REMARK 3 S21: 3.1533 S22: -0.1043 S23: -1.3259 REMARK 3 S31: -1.6260 S32: 0.6719 S33: 1.0648 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YQ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1290054570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 2.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918410 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2178 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.910 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.80 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : 0.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YPY REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL OF 1 MM PROTEIN IN 5 MM BISTRIS, REMARK 280 PH 6.5, 2 MM DTT WAS ADDED TO 1 UL OF 0.1 M SODIUM CITRATE, PH REMARK 280 2.5, 1.5 M AMMONIUM SULFATE. THE MIXTURE WAS INCUBATED AT 4 REMARK 280 DEGREE CENTIGRADE IN A HANGING DROP SETUP. CRYSTALS GREW IN A REMARK 280 FEW DAYS AND WERE CRYO-PROTECTED BY SHORT SOAKING IN 0.1 M REMARK 280 SODIUM CITRATE, PH 2.5, 1.5 M AMMONIUM SULFATE, 25% (V/V) REMARK 280 GLYCEROL., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -251.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 107.40000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 107.40000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 0.000000 -1.000000 107.40000 REMARK 350 BIOMT3 4 0.000000 -1.000000 0.000000 107.40000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 107.40000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 107.40000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 107.40000 REMARK 350 BIOMT1 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 0.000000 0.000000 -1.000000 107.40000 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 1.000000 0.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 994 REMARK 465 SER A 995 REMARK 465 GLY A 996 REMARK 465 VAL A 997 REMARK 465 ARG A 998 REMARK 465 MET A 999 REMARK 465 ARG A 1000 REMARK 465 ARG A 1001 REMARK 465 VAL A 1002 REMARK 465 PRO A 1003 REMARK 465 VAL A 1004 REMARK 465 THR A 1005 REMARK 465 HIS A 1006 REMARK 465 PRO A 1007 REMARK 465 LYS A 1008 REMARK 465 LYS A 1009 REMARK 465 PRO A 1010 REMARK 465 HIS A 1011 REMARK 465 PRO A 1012 REMARK 465 ARG A 1013 REMARK 465 TYR A 1014 REMARK 465 GLN A 1015 REMARK 465 GLN A 1016 REMARK 465 PRO A 1017 REMARK 465 PRO A 1018 REMARK 465 VAL A 1019 REMARK 465 PRO A 1020 REMARK 465 TYR A 1021 REMARK 465 ARG A 1022 REMARK 465 GLN A 1023 REMARK 465 GLY A 1092 REMARK 465 PRO A 1093 REMARK 465 ASP A 1094 REMARK 465 GLN A 1095 REMARK 465 SER A 1096 REMARK 465 GLN A 1147 REMARK 465 PRO A 1148 REMARK 465 GLY A 1149 REMARK 465 GLU A 1150 REMARK 465 ASN A 1151 REMARK 465 GLN A 1152 REMARK 465 GLY A 1153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1048 72.83 48.90 REMARK 500 GLN A1107 -63.78 -94.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2147 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YPY RELATED DB: PDB REMARK 900 KSHV LANA (ORF73) C-TERMINAL DOMAIN, DECAMERIC RING: MONOCLINIC REMARK 900 CRYSTAL FORM REMARK 900 RELATED ID: 2YPZ RELATED DB: PDB REMARK 900 KSHV LANA (ORF73) C-TERMINAL DOMAIN, DECAMERIC RING: ORTHORHOMBIC REMARK 900 CRYSTAL FORM REMARK 900 RELATED ID: 2YQ1 RELATED DB: PDB REMARK 900 MHV-68 LANA (ORF73) C-TERMINAL DOMAIN: TRICLINIC CRYSTAL FORM DBREF 2YQ0 A 996 1153 UNP Q76SB0 Q76SB0_HHV8 996 1153 SEQADV 2YQ0 GLY A 994 UNP Q76SB0 EXPRESSION TAG SEQADV 2YQ0 SER A 995 UNP Q76SB0 EXPRESSION TAG SEQRES 1 A 160 GLY SER GLY VAL ARG MET ARG ARG VAL PRO VAL THR HIS SEQRES 2 A 160 PRO LYS LYS PRO HIS PRO ARG TYR GLN GLN PRO PRO VAL SEQRES 3 A 160 PRO TYR ARG GLN ILE ASP ASP CYS PRO ALA LYS ALA ARG SEQRES 4 A 160 PRO GLN HIS ILE PHE TYR ARG ARG PHE LEU GLY LYS ASP SEQRES 5 A 160 GLY ARG ARG ASP PRO LYS CYS GLN TRP LYS PHE ALA VAL SEQRES 6 A 160 ILE PHE TRP GLY ASN ASP PRO TYR GLY LEU LYS LYS LEU SEQRES 7 A 160 SER GLN ALA PHE GLN PHE GLY GLY VAL LYS ALA GLY PRO SEQRES 8 A 160 VAL SER CYS LEU PRO HIS PRO GLY PRO ASP GLN SER PRO SEQRES 9 A 160 ILE THR TYR CYS VAL TYR VAL TYR CYS GLN ASN LYS ASP SEQRES 10 A 160 THR SER LYS LYS VAL GLN MET ALA ARG LEU ALA TRP GLU SEQRES 11 A 160 ALA SER HIS PRO LEU ALA GLY ASN LEU GLN SER SER ILE SEQRES 12 A 160 VAL LYS PHE LYS LYS PRO LEU PRO LEU THR GLN PRO GLY SEQRES 13 A 160 GLU ASN GLN GLY HET SO4 A2147 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- HELIX 1 1 ALA A 1029 GLY A 1046 1 18 HELIX 2 2 PRO A 1065 ALA A 1074 1 10 HELIX 3 3 LYS A 1109 SER A 1125 1 17 SHEET 1 1 1 PHE A1056 GLY A1062 0 SHEET 1 2 1 LYS A1081 ALA A1082 0 SHEET 1 3 1 SER A1086 CYS A1087 0 SHEET 1 4 1 TYR A1100 CYS A1106 0 SHEET 1 5 1 GLN A1133 LYS A1138 0 SITE 1 AC1 6 ARG A1032 GLY A1067 LYS A1070 ARG A1119 SITE 2 AC1 6 ALA A1129 GLY A1130 CRYST1 107.400 107.400 107.400 90.00 90.00 90.00 P 4 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009311 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009311 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009311 0.00000