data_2YUL # _entry.id 2YUL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YUL pdb_00002yul 10.2210/pdb2yul/pdb RCSB RCSB027153 ? ? WWPDB D_1000027153 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso002002627.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YUL _pdbx_database_status.recvd_initial_deposition_date 2007-04-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abe, H.' 1 'Tochio, N.' 2 'Miyamoto, K.' 3 'Koshiba, S.' 4 'Inoue, M.' 5 'Kigawa, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the HMG box of human Transcription factor SOX-17' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abe, H.' 1 ? primary 'Tochio, N.' 2 ? primary 'Miyamoto, K.' 3 ? primary 'Koshiba, S.' 4 ? primary 'Inoue, M.' 5 ? primary 'Kigawa, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Transcription factor SOX-17' _entity.formula_weight 9293.553 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'HMG (high mobility group) box' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKSGPS SG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKSGPS SG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso002002627.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ILE n 1 9 ARG n 1 10 ARG n 1 11 PRO n 1 12 MET n 1 13 ASN n 1 14 ALA n 1 15 PHE n 1 16 MET n 1 17 VAL n 1 18 TRP n 1 19 ALA n 1 20 LYS n 1 21 ASP n 1 22 GLU n 1 23 ARG n 1 24 LYS n 1 25 ARG n 1 26 LEU n 1 27 ALA n 1 28 GLN n 1 29 GLN n 1 30 ASN n 1 31 PRO n 1 32 ASP n 1 33 LEU n 1 34 HIS n 1 35 ASN n 1 36 ALA n 1 37 GLU n 1 38 LEU n 1 39 SER n 1 40 LYS n 1 41 MET n 1 42 LEU n 1 43 GLY n 1 44 LYS n 1 45 SER n 1 46 TRP n 1 47 LYS n 1 48 ALA n 1 49 LEU n 1 50 THR n 1 51 LEU n 1 52 ALA n 1 53 GLU n 1 54 LYS n 1 55 ARG n 1 56 PRO n 1 57 PHE n 1 58 VAL n 1 59 GLU n 1 60 GLU n 1 61 ALA n 1 62 GLU n 1 63 ARG n 1 64 LEU n 1 65 ARG n 1 66 VAL n 1 67 GLN n 1 68 HIS n 1 69 MET n 1 70 GLN n 1 71 ASP n 1 72 HIS n 1 73 PRO n 1 74 ASN n 1 75 TYR n 1 76 LYS n 1 77 SER n 1 78 GLY n 1 79 PRO n 1 80 SER n 1 81 SER n 1 82 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene SOX17 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P051003-07 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SOX17_HUMAN _struct_ref.pdbx_db_accession Q9H6I2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code IRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYK _struct_ref.pdbx_align_begin 68 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YUL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9H6I2 _struct_ref_seq.db_align_beg 68 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 136 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YUL GLY A 1 ? UNP Q9H6I2 ? ? 'expression tag' 1 1 1 2YUL SER A 2 ? UNP Q9H6I2 ? ? 'expression tag' 2 2 1 2YUL SER A 3 ? UNP Q9H6I2 ? ? 'expression tag' 3 3 1 2YUL GLY A 4 ? UNP Q9H6I2 ? ? 'expression tag' 4 4 1 2YUL SER A 5 ? UNP Q9H6I2 ? ? 'expression tag' 5 5 1 2YUL SER A 6 ? UNP Q9H6I2 ? ? 'expression tag' 6 6 1 2YUL GLY A 7 ? UNP Q9H6I2 ? ? 'expression tag' 7 7 1 2YUL SER A 77 ? UNP Q9H6I2 ? ? 'expression tag' 77 8 1 2YUL GLY A 78 ? UNP Q9H6I2 ? ? 'expression tag' 78 9 1 2YUL PRO A 79 ? UNP Q9H6I2 ? ? 'expression tag' 79 10 1 2YUL SER A 80 ? UNP Q9H6I2 ? ? 'expression tag' 80 11 1 2YUL SER A 81 ? UNP Q9H6I2 ? ? 'expression tag' 81 12 1 2YUL GLY A 82 ? UNP Q9H6I2 ? ? 'expression tag' 82 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.1mM Protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2YUL _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2YUL _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2YUL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection TopSpin 1.3 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMNMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9747 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2YUL _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2YUL _struct.title 'Solution structure of the HMG box of human Transcription factor SOX-17' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YUL _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;TRANSCRIPTION, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 13 ? ASN A 30 ? ASN A 13 ASN A 30 1 ? 18 HELX_P HELX_P2 2 HIS A 34 ? LEU A 49 ? HIS A 34 LEU A 49 1 ? 16 HELX_P HELX_P3 3 THR A 50 ? ASP A 71 ? THR A 50 ASP A 71 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2YUL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YUL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 TRP 18 18 18 TRP TRP A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 MET 41 41 41 MET MET A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 TRP 46 46 46 TRP TRP A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLY 82 82 82 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 17 ? ? -50.13 -70.68 2 1 LYS A 20 ? ? -34.73 -33.69 3 1 ALA A 36 ? ? -34.29 -38.87 4 1 LYS A 40 ? ? -35.15 -33.94 5 1 LEU A 49 ? ? -49.39 159.30 6 1 PRO A 73 ? ? -69.75 4.00 7 1 ASN A 74 ? ? -75.81 49.81 8 1 TYR A 75 ? ? -127.33 -52.51 9 1 LYS A 76 ? ? -174.93 119.01 10 1 PRO A 79 ? ? -69.76 -173.88 11 2 PRO A 11 ? ? -69.82 -170.37 12 2 ASN A 35 ? ? -33.51 -71.40 13 2 LYS A 40 ? ? -36.74 -31.39 14 2 PRO A 73 ? ? -69.78 79.88 15 2 ASN A 74 ? ? -135.02 -34.31 16 2 TYR A 75 ? ? -42.06 161.56 17 2 LYS A 76 ? ? -50.94 177.73 18 3 SER A 5 ? ? -169.38 118.06 19 3 LYS A 20 ? ? -36.02 -35.38 20 3 ASN A 35 ? ? -34.55 -70.31 21 3 ALA A 36 ? ? -34.27 -38.41 22 3 LYS A 40 ? ? -38.44 -31.11 23 3 LEU A 49 ? ? -42.64 155.95 24 3 LEU A 64 ? ? -90.54 -63.32 25 3 TYR A 75 ? ? -38.96 156.72 26 3 LYS A 76 ? ? -49.11 103.90 27 4 ALA A 36 ? ? -38.31 -38.15 28 4 LYS A 40 ? ? -36.96 -30.94 29 4 PRO A 73 ? ? -69.77 0.47 30 4 TYR A 75 ? ? -47.65 156.75 31 5 LYS A 20 ? ? -34.33 -35.13 32 5 ASN A 35 ? ? -33.63 -70.23 33 5 ALA A 36 ? ? -34.21 -39.87 34 5 LYS A 40 ? ? -35.37 -32.05 35 5 PRO A 73 ? ? -69.68 3.09 36 5 SER A 77 ? ? -174.95 131.27 37 5 SER A 80 ? ? -40.43 92.50 38 6 PRO A 11 ? ? -69.71 -177.21 39 6 LYS A 20 ? ? -36.44 -34.64 40 6 ASN A 35 ? ? -33.83 -70.38 41 6 ALA A 36 ? ? -34.75 -39.80 42 6 LYS A 40 ? ? -35.75 -30.86 43 6 TYR A 75 ? ? -44.93 170.72 44 6 PRO A 79 ? ? -69.80 86.12 45 7 SER A 2 ? ? -67.23 82.26 46 7 SER A 3 ? ? 34.63 41.85 47 7 LYS A 20 ? ? -39.61 -32.84 48 7 ALA A 36 ? ? -35.37 -38.61 49 7 LYS A 40 ? ? -37.12 -31.54 50 7 LYS A 76 ? ? -172.91 104.96 51 8 SER A 3 ? ? -37.85 154.23 52 8 PRO A 11 ? ? -69.72 -171.52 53 8 LYS A 20 ? ? -39.92 -32.53 54 8 ASN A 35 ? ? -33.98 -70.00 55 8 ALA A 36 ? ? -34.33 -39.53 56 8 LYS A 40 ? ? -36.71 -30.54 57 8 LEU A 49 ? ? -46.39 152.16 58 8 GLU A 60 ? ? -91.09 -64.79 59 8 PRO A 73 ? ? -69.74 4.54 60 8 ASN A 74 ? ? -75.70 48.04 61 8 TYR A 75 ? ? -134.19 -51.56 62 8 LYS A 76 ? ? -167.38 105.51 63 8 SER A 77 ? ? -164.12 119.91 64 8 SER A 81 ? ? 37.75 39.96 65 9 ASN A 35 ? ? -34.58 -70.09 66 9 ALA A 36 ? ? -33.73 -38.38 67 9 TYR A 75 ? ? -46.38 169.85 68 9 SER A 81 ? ? 37.40 48.74 69 10 SER A 2 ? ? 35.84 36.55 70 10 SER A 6 ? ? -92.72 -64.38 71 10 ALA A 36 ? ? -34.39 -38.51 72 10 LYS A 40 ? ? -36.70 -31.76 73 10 PRO A 73 ? ? -69.79 5.20 74 10 ASN A 74 ? ? -51.08 -70.39 75 10 LYS A 76 ? ? -178.62 127.83 76 11 ASN A 35 ? ? -33.24 -70.37 77 11 ALA A 36 ? ? -34.83 -39.81 78 11 LYS A 40 ? ? -35.08 -34.24 79 11 PRO A 73 ? ? -69.76 0.81 80 11 SER A 80 ? ? -170.00 142.31 81 12 LYS A 20 ? ? -38.48 -36.83 82 12 ALA A 36 ? ? -33.60 -37.61 83 12 PRO A 73 ? ? -69.75 2.75 84 12 PRO A 79 ? ? -69.71 2.89 85 13 VAL A 17 ? ? -43.77 -70.90 86 13 LYS A 20 ? ? -36.84 -34.99 87 13 ASN A 35 ? ? -32.56 -72.78 88 13 LYS A 40 ? ? -36.23 -30.99 89 13 PRO A 73 ? ? -69.76 0.10 90 14 LYS A 20 ? ? -38.81 -36.60 91 14 ALA A 36 ? ? -34.05 -36.20 92 14 GLU A 60 ? ? -94.35 -60.60 93 14 HIS A 68 ? ? -39.67 -26.10 94 14 PRO A 73 ? ? -69.72 3.83 95 14 LYS A 76 ? ? -176.45 147.50 96 14 SER A 77 ? ? -174.62 106.15 97 15 ASN A 35 ? ? -35.18 -70.11 98 15 ALA A 36 ? ? -34.39 -37.47 99 15 LYS A 40 ? ? -36.49 -32.07 100 15 TYR A 75 ? ? -54.53 -175.95 101 16 LYS A 20 ? ? -35.98 -33.95 102 16 ASN A 35 ? ? -32.75 -72.11 103 16 LYS A 40 ? ? -36.98 -30.92 104 16 GLU A 60 ? ? -95.86 -60.94 105 16 PRO A 73 ? ? -69.74 3.55 106 16 ASN A 74 ? ? -37.15 -35.39 107 17 PRO A 11 ? ? -69.84 -176.93 108 17 LYS A 20 ? ? -35.06 -34.28 109 17 ASP A 21 ? ? -92.20 -61.35 110 17 ASN A 35 ? ? -34.20 -70.02 111 17 ALA A 36 ? ? -34.14 -39.18 112 17 LYS A 40 ? ? -36.63 -30.83 113 17 PRO A 73 ? ? -69.74 6.60 114 17 LYS A 76 ? ? -34.13 141.72 115 17 SER A 80 ? ? -37.10 115.71 116 18 SER A 5 ? ? -37.40 126.57 117 18 SER A 6 ? ? -97.04 40.93 118 18 LYS A 20 ? ? -34.20 -33.31 119 18 ASN A 35 ? ? -34.13 -70.22 120 18 LYS A 40 ? ? -35.88 -30.90 121 18 PRO A 73 ? ? -69.71 78.33 122 18 ASN A 74 ? ? -128.42 -51.43 123 18 LYS A 76 ? ? -132.39 -69.00 124 19 ALA A 36 ? ? -36.19 -39.81 125 19 LYS A 40 ? ? -38.34 -29.80 126 19 LYS A 76 ? ? -172.40 129.70 127 20 PRO A 11 ? ? -69.77 -174.10 128 20 ALA A 36 ? ? -35.87 -39.02 129 20 LYS A 40 ? ? -35.89 -31.26 130 20 VAL A 66 ? ? -38.55 -38.94 131 20 HIS A 68 ? ? -38.60 -28.28 132 20 PRO A 73 ? ? -69.69 1.02 #