HEADER HYDROLASE 27-APR-07 2YY6 TITLE CRYSTAL STRUCTURE OF THE PHOSPHOGLYCOLATE PHOSPHATASE FROM AQUIFEX TITLE 2 AEOLICUS VF5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOGLYCOLATE PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PGPASE, PGP; COMPND 5 EC: 3.1.3.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 STRAIN: VF5; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL-21(DE3)-RIL-X; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS PHOSPHOGLYCOLATE PHOSPHATASE, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.TANAKA,T.S.KUMAREVEL,S.KURAMITSU,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 5 15-NOV-23 2YY6 1 REMARK REVDAT 4 25-OCT-23 2YY6 1 REMARK REVDAT 3 13-JUL-11 2YY6 1 VERSN REVDAT 2 24-FEB-09 2YY6 1 VERSN REVDAT 1 30-OCT-07 2YY6 0 JRNL AUTH T.TANAKA,T.S.KUMAREVEL,S.KURAMITSU,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF THE PHOSPHOGLYCOLATE PHOSPHATASE FROM JRNL TITL 2 AQUIFEX AEOLICUS VF5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1576429.010 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1173 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3683 REMARK 3 BIN R VALUE (WORKING SET) : 0.3460 REMARK 3 BIN FREE R VALUE : 0.4170 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 170 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.032 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3284 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 3.95000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.42 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.56 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.070 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.490 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.540 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.090 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.210 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 51.59 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YY6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000027282. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : BENDING MAGNET REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23364 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : 0.04100 REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.29400 REMARK 200 R SYM FOR SHELL (I) : 0.26200 REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2NYV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG6000, 0.5M LI-SULFATE, 0.1M NA REMARK 280 -ACETATE , PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.90100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.80200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 209 REMARK 465 ILE A 210 REMARK 465 VAL A 211 REMARK 465 GLU A 212 REMARK 465 PHE A 213 REMARK 465 HIS B 209 REMARK 465 ILE B 210 REMARK 465 VAL B 211 REMARK 465 GLU B 212 REMARK 465 PHE B 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 139 N - CA - C ANGL. DEV. = 19.8 DEGREES REMARK 500 PRO B 138 C - N - CA ANGL. DEV. = -10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 -81.33 -93.84 REMARK 500 THR A 11 -61.86 -125.70 REMARK 500 LYS A 57 -118.75 61.20 REMARK 500 LYS A 70 -64.66 -172.27 REMARK 500 LEU A 73 34.08 160.87 REMARK 500 GLU A 74 10.20 -156.68 REMARK 500 ASN A 75 40.84 -169.51 REMARK 500 VAL A 78 -57.49 -127.88 REMARK 500 GLU A 85 -18.82 85.82 REMARK 500 LEU A 107 124.69 -32.84 REMARK 500 LEU A 126 144.75 -174.12 REMARK 500 THR A 132 -85.11 -2.85 REMARK 500 SER A 139 150.55 106.57 REMARK 500 ASN A 188 -72.83 -123.12 REMARK 500 MSE A 206 53.38 -94.32 REMARK 500 ARG B 2 -1.99 -150.55 REMARK 500 LEU B 8 -82.80 -91.07 REMARK 500 LYS B 57 -129.57 54.06 REMARK 500 ARG B 69 58.72 -68.99 REMARK 500 LYS B 70 -43.04 -171.97 REMARK 500 LEU B 73 4.12 -60.21 REMARK 500 VAL B 78 -61.37 -133.10 REMARK 500 GLU B 85 -14.54 87.99 REMARK 500 LEU B 126 146.63 -171.00 REMARK 500 LYS B 136 -87.28 -103.31 REMARK 500 ASP B 162 33.65 -149.91 REMARK 500 ASN B 188 -69.27 -131.75 REMARK 500 MSE B 206 45.14 -100.83 REMARK 500 ASP B 207 -169.13 -117.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AAE001001342.1 RELATED DB: TARGETDB DBREF 2YY6 A 1 213 UNP O67359 GPH_AQUAE 1 213 DBREF 2YY6 B 1 213 UNP O67359 GPH_AQUAE 1 213 SEQRES 1 A 213 MSE ARG VAL ILE LEU PHE ASP LEU ASP GLY THR LEU ILE SEQRES 2 A 213 ASP SER ALA LYS ASP ILE ALA LEU ALA LEU GLU LYS THR SEQRES 3 A 213 LEU LYS GLU LEU GLY LEU GLU GLU TYR TYR PRO ASP ASN SEQRES 4 A 213 VAL THR LYS TYR ILE GLY GLY GLY VAL ARG ALA LEU LEU SEQRES 5 A 213 GLU LYS VAL LEU LYS ASP LYS PHE ARG GLU GLU TYR VAL SEQRES 6 A 213 GLU VAL PHE ARG LYS HIS TYR LEU GLU ASN PRO VAL VAL SEQRES 7 A 213 TYR THR LYS PRO TYR PRO GLU ILE PRO TYR THR LEU GLU SEQRES 8 A 213 ALA LEU LYS SER LYS GLY PHE LYS LEU ALA VAL VAL SER SEQRES 9 A 213 ASN LYS LEU GLU GLU LEU SER LYS LYS ILE LEU ASP ILE SEQRES 10 A 213 LEU ASN LEU SER GLY TYR PHE ASP LEU ILE VAL GLY GLY SEQRES 11 A 213 ASP THR PHE GLY GLU LYS LYS PRO SER PRO THR PRO VAL SEQRES 12 A 213 LEU LYS THR LEU GLU ILE LEU GLY GLU GLU PRO GLU LYS SEQRES 13 A 213 ALA LEU ILE VAL GLY ASP THR ASP ALA ASP ILE GLU ALA SEQRES 14 A 213 GLY LYS ARG ALA GLY THR LYS THR ALA LEU ALA LEU TRP SEQRES 15 A 213 GLY TYR VAL LYS LEU ASN SER GLN ILE PRO ASP PHE THR SEQRES 16 A 213 LEU SER ARG PRO SER ASP LEU VAL LYS LEU MSE ASP ASN SEQRES 17 A 213 HIS ILE VAL GLU PHE SEQRES 1 B 213 MSE ARG VAL ILE LEU PHE ASP LEU ASP GLY THR LEU ILE SEQRES 2 B 213 ASP SER ALA LYS ASP ILE ALA LEU ALA LEU GLU LYS THR SEQRES 3 B 213 LEU LYS GLU LEU GLY LEU GLU GLU TYR TYR PRO ASP ASN SEQRES 4 B 213 VAL THR LYS TYR ILE GLY GLY GLY VAL ARG ALA LEU LEU SEQRES 5 B 213 GLU LYS VAL LEU LYS ASP LYS PHE ARG GLU GLU TYR VAL SEQRES 6 B 213 GLU VAL PHE ARG LYS HIS TYR LEU GLU ASN PRO VAL VAL SEQRES 7 B 213 TYR THR LYS PRO TYR PRO GLU ILE PRO TYR THR LEU GLU SEQRES 8 B 213 ALA LEU LYS SER LYS GLY PHE LYS LEU ALA VAL VAL SER SEQRES 9 B 213 ASN LYS LEU GLU GLU LEU SER LYS LYS ILE LEU ASP ILE SEQRES 10 B 213 LEU ASN LEU SER GLY TYR PHE ASP LEU ILE VAL GLY GLY SEQRES 11 B 213 ASP THR PHE GLY GLU LYS LYS PRO SER PRO THR PRO VAL SEQRES 12 B 213 LEU LYS THR LEU GLU ILE LEU GLY GLU GLU PRO GLU LYS SEQRES 13 B 213 ALA LEU ILE VAL GLY ASP THR ASP ALA ASP ILE GLU ALA SEQRES 14 B 213 GLY LYS ARG ALA GLY THR LYS THR ALA LEU ALA LEU TRP SEQRES 15 B 213 GLY TYR VAL LYS LEU ASN SER GLN ILE PRO ASP PHE THR SEQRES 16 B 213 LEU SER ARG PRO SER ASP LEU VAL LYS LEU MSE ASP ASN SEQRES 17 B 213 HIS ILE VAL GLU PHE MODRES 2YY6 MSE A 1 MET SELENOMETHIONINE MODRES 2YY6 MSE A 206 MET SELENOMETHIONINE MODRES 2YY6 MSE B 1 MET SELENOMETHIONINE MODRES 2YY6 MSE B 206 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 206 8 HET MSE B 1 8 HET MSE B 206 8 HET SO4 A 301 5 HET SO4 B 302 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *191(H2 O) HELIX 1 1 SER A 15 GLY A 31 1 17 HELIX 2 2 LEU A 32 TYR A 36 5 5 HELIX 3 3 ASN A 39 TYR A 43 5 5 HELIX 4 4 GLY A 47 LYS A 57 1 11 HELIX 5 5 ASP A 58 PHE A 60 5 3 HELIX 6 6 ARG A 61 TYR A 72 1 12 HELIX 7 7 GLU A 85 LYS A 96 1 12 HELIX 8 8 LEU A 107 LEU A 118 1 12 HELIX 9 9 LEU A 120 PHE A 124 5 5 HELIX 10 10 PRO A 140 ILE A 149 1 10 HELIX 11 11 GLU A 153 GLU A 155 5 3 HELIX 12 12 THR A 163 GLY A 174 1 12 HELIX 13 13 PRO A 199 MSE A 206 1 8 HELIX 14 14 SER B 15 GLY B 31 1 17 HELIX 15 15 LEU B 32 TYR B 36 5 5 HELIX 16 16 ASN B 39 TYR B 43 5 5 HELIX 17 17 GLY B 47 LYS B 57 1 11 HELIX 18 18 ASP B 58 PHE B 60 5 3 HELIX 19 19 ARG B 61 TYR B 72 1 12 HELIX 20 20 GLU B 85 LYS B 96 1 12 HELIX 21 21 LEU B 107 LEU B 118 1 12 HELIX 22 22 LEU B 120 PHE B 124 5 5 HELIX 23 23 PRO B 140 GLY B 151 1 12 HELIX 24 24 GLU B 153 GLU B 155 5 3 HELIX 25 25 THR B 163 GLY B 174 1 12 HELIX 26 26 ARG B 198 MSE B 206 1 9 SHEET 1 A 5 LYS A 99 VAL A 102 0 SHEET 2 A 5 VAL A 3 PHE A 6 1 N PHE A 6 O ALA A 101 SHEET 3 A 5 ALA A 157 GLY A 161 1 O LEU A 158 N LEU A 5 SHEET 4 A 5 LYS A 176 ALA A 180 1 O LYS A 176 N ILE A 159 SHEET 5 A 5 PHE A 194 LEU A 196 1 O LEU A 196 N LEU A 179 SHEET 1 B 2 ILE A 13 ASP A 14 0 SHEET 2 B 2 LYS A 81 PRO A 82 -1 O LYS A 81 N ASP A 14 SHEET 1 C 6 LEU B 126 VAL B 128 0 SHEET 2 C 6 LYS B 99 VAL B 103 1 N VAL B 102 O VAL B 128 SHEET 3 C 6 VAL B 3 PHE B 6 1 N PHE B 6 O ALA B 101 SHEET 4 C 6 ALA B 157 GLY B 161 1 O VAL B 160 N LEU B 5 SHEET 5 C 6 LYS B 176 ALA B 180 1 O LYS B 176 N ILE B 159 SHEET 6 C 6 PHE B 194 LEU B 196 1 O LEU B 196 N LEU B 179 SHEET 1 D 2 ILE B 13 ASP B 14 0 SHEET 2 D 2 LYS B 81 PRO B 82 -1 O LYS B 81 N ASP B 14 CISPEP 1 LYS A 137 PRO A 138 0 2.24 CISPEP 2 SER A 139 PRO A 140 0 -2.32 SITE 1 AC1 5 PRO A 37 ASP A 38 ASN A 39 LYS A 42 SITE 2 AC1 5 TYR A 43 SITE 1 AC2 4 PRO B 37 ASP B 38 ASN B 39 TYR B 43 CRYST1 96.247 96.247 50.703 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010390 0.005999 0.000000 0.00000 SCALE2 0.000000 0.011997 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019723 0.00000 HETATM 1 N MSE A 1 16.836 10.402 22.145 1.00 74.80 N HETATM 2 CA MSE A 1 16.387 8.982 22.165 1.00 74.92 C HETATM 3 C MSE A 1 16.574 8.388 20.777 1.00 71.17 C HETATM 4 O MSE A 1 17.612 7.800 20.484 1.00 71.60 O HETATM 5 CB MSE A 1 14.919 8.914 22.570 1.00 80.18 C HETATM 6 CG MSE A 1 14.654 8.033 23.758 1.00 86.28 C HETATM 7 SE MSE A 1 12.875 8.361 24.334 1.00 98.08 SE HETATM 8 CE MSE A 1 11.942 6.955 23.405 1.00 93.30 C