HEADER METAL BINDING PROTEIN 01-MAY-07 2YYR TITLE STRUCTURAL ANALYSIS OF PHD DOMAIN OF PYGOPUS COMPLEXED WITH TITLE 2 TRIMETHYLATED HISTONE H3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYGOPUS HOMOLOG 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PHD DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: H3K4ME3 PEPTIDE; COMPND 8 CHAIN: P; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: CELL-FREE PROTEIN SYNTHESIS; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PCR2.1-TOPO; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: SYNTHESIZED HISTONE H3 PEPTIDE, TRI-METHYLATED AT SOURCE 11 LYS4 KEYWDS PHD FINGER, BCL9/LGS INTERACTOR, HISTONE RECOGNITION, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.NAKAMURA,B.PADMANABHAN,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 15-NOV-23 2YYR 1 REMARK REVDAT 3 25-OCT-23 2YYR 1 REMARK LINK REVDAT 2 24-FEB-09 2YYR 1 VERSN REVDAT 1 06-MAY-08 2YYR 0 JRNL AUTH Y.NAKAMURA,T.UMEHARA,B.PADMANABHAN,S.YOKOYAMA JRNL TITL STRUCTURAL ANALYSIS OF PHD DOMAIN OF PYGOPUS COMPLEXED WITH JRNL TITL 2 TRIMETHYLATED HISTONE H3 PEPTIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 105460.710 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 6106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.600 REMARK 3 FREE R VALUE TEST SET COUNT : 646 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 805 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 86 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.041 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 951 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.62000 REMARK 3 B22 (A**2) : 7.62000 REMARK 3 B33 (A**2) : -15.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.26 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.37 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.040 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 11.04 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000027303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : 0.31500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2DX8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M NA CITRATE, 0.1M LISO4, 0.1MM REMARK 280 ZNCL2, 50MM TRIS-HCL, PH 9.0, CO-CRYSTALLIZATION, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.92650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.75900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.75900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.88975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.75900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.75900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.96325 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.75900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.75900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 71.88975 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.75900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.75900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 23.96325 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 47.92650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 330 REMARK 465 GLY A 331 REMARK 465 HIS A 332 REMARK 465 SER A 333 REMARK 465 SER A 334 REMARK 465 SER A 335 REMARK 465 ASP A 336 REMARK 465 HIS B 330 REMARK 465 GLY B 331 REMARK 465 HIS B 332 REMARK 465 SER B 333 REMARK 465 SER B 334 REMARK 465 SER B 335 REMARK 465 ASP B 336 REMARK 465 ALA P 7 REMARK 465 ARG P 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 345 -1.75 67.98 REMARK 500 SER A 360 -75.04 -164.22 REMARK 500 VAL B 338 132.71 52.32 REMARK 500 SER B 360 -77.31 -164.68 REMARK 500 GLN P 5 78.66 -65.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 341 SG REMARK 620 2 CYS A 344 SG 106.5 REMARK 620 3 HIS A 366 ND1 98.3 104.1 REMARK 620 4 CYS A 369 SG 114.1 111.7 120.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 357 SG REMARK 620 2 CYS A 361 SG 106.8 REMARK 620 3 CYS A 390 SG 114.3 119.2 REMARK 620 4 CYS A 393 SG 105.5 109.4 100.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 341 SG REMARK 620 2 CYS B 344 SG 111.4 REMARK 620 3 HIS B 366 ND1 99.7 100.4 REMARK 620 4 CYS B 369 SG 116.9 109.6 117.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 357 SG REMARK 620 2 CYS B 361 SG 107.2 REMARK 620 3 CYS B 390 SG 114.3 119.4 REMARK 620 4 CYS B 393 SG 102.9 108.5 103.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DX8 RELATED DB: PDB REMARK 900 NATIVE STRUCTURE REMARK 900 RELATED ID: MMT007007653.2 RELATED DB: TARGETDB DBREF 2YYR A 330 396 UNP Q9D0P5 PYGO1_MOUSE 330 396 DBREF 2YYR B 330 396 UNP Q9D0P5 PYGO1_MOUSE 330 396 DBREF 2YYR P 1 8 PDB 2YYR 2YYR 1 8 SEQRES 1 A 67 HIS GLY HIS SER SER SER ASP PRO VAL TYR PRO CYS GLY SEQRES 2 A 67 ILE CYS THR ASN GLU VAL ASN ASP ASP GLN ASP ALA ILE SEQRES 3 A 67 LEU CYS GLU ALA SER CYS GLN LYS TRP PHE HIS ARG ILE SEQRES 4 A 67 CYS THR GLY MSE THR GLU THR ALA TYR GLY LEU LEU THR SEQRES 5 A 67 ALA GLU ALA SER ALA VAL TRP GLY CYS ASP THR CYS MSE SEQRES 6 A 67 ALA ASP SEQRES 1 B 67 HIS GLY HIS SER SER SER ASP PRO VAL TYR PRO CYS GLY SEQRES 2 B 67 ILE CYS THR ASN GLU VAL ASN ASP ASP GLN ASP ALA ILE SEQRES 3 B 67 LEU CYS GLU ALA SER CYS GLN LYS TRP PHE HIS ARG ILE SEQRES 4 B 67 CYS THR GLY MSE THR GLU THR ALA TYR GLY LEU LEU THR SEQRES 5 B 67 ALA GLU ALA SER ALA VAL TRP GLY CYS ASP THR CYS MSE SEQRES 6 B 67 ALA ASP SEQRES 1 P 8 ALA ARG THR M3L GLN THR ALA ARG MODRES 2YYR MSE A 372 MET SELENOMETHIONINE MODRES 2YYR MSE A 394 MET SELENOMETHIONINE MODRES 2YYR MSE B 372 MET SELENOMETHIONINE MODRES 2YYR MSE B 394 MET SELENOMETHIONINE MODRES 2YYR M3L P 4 LYS N-TRIMETHYLLYSINE HET MSE A 372 8 HET MSE A 394 8 HET MSE B 372 8 HET MSE B 394 8 HET M3L P 4 12 HET ZN A 401 1 HET ZN A 402 1 HET ZN B 403 1 HET ZN B 404 1 HETNAM MSE SELENOMETHIONINE HETNAM M3L N-TRIMETHYLLYSINE HETNAM ZN ZINC ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 M3L C9 H21 N2 O2 1+ FORMUL 4 ZN 4(ZN 2+) FORMUL 8 HOH *60(H2 O) HELIX 1 1 ARG A 367 GLY A 371 1 5 HELIX 2 2 THR A 373 GLU A 383 1 11 HELIX 3 3 CYS A 390 ALA A 395 1 6 HELIX 4 4 ARG B 367 GLY B 371 1 5 HELIX 5 5 THR B 373 GLU B 383 1 11 HELIX 6 6 CYS B 390 ALA B 395 1 6 SHEET 1 A 2 ALA A 354 LEU A 356 0 SHEET 2 A 2 TRP A 364 HIS A 366 -1 O PHE A 365 N ILE A 355 SHEET 1 B 2 ALA A 386 TRP A 388 0 SHEET 2 B 2 ALA B 386 TRP B 388 -1 O VAL B 387 N VAL A 387 SHEET 1 C 2 ALA B 354 LEU B 356 0 SHEET 2 C 2 TRP B 364 HIS B 366 -1 O PHE B 365 N ILE B 355 LINK SG CYS A 341 ZN ZN A 401 1555 1555 2.34 LINK SG CYS A 344 ZN ZN A 401 1555 1555 2.45 LINK SG CYS A 357 ZN ZN A 402 1555 1555 2.37 LINK SG CYS A 361 ZN ZN A 402 1555 1555 2.24 LINK ND1 HIS A 366 ZN ZN A 401 1555 1555 2.12 LINK SG CYS A 369 ZN ZN A 401 1555 1555 2.24 LINK SG CYS A 390 ZN ZN A 402 1555 1555 2.24 LINK SG CYS A 393 ZN ZN A 402 1555 1555 2.33 LINK SG CYS B 341 ZN ZN B 403 1555 1555 2.35 LINK SG CYS B 344 ZN ZN B 403 1555 1555 2.41 LINK SG CYS B 357 ZN ZN B 404 1555 1555 2.36 LINK SG CYS B 361 ZN ZN B 404 1555 1555 2.29 LINK ND1 HIS B 366 ZN ZN B 403 1555 1555 2.24 LINK SG CYS B 369 ZN ZN B 403 1555 1555 2.27 LINK SG CYS B 390 ZN ZN B 404 1555 1555 2.25 LINK SG CYS B 393 ZN ZN B 404 1555 1555 2.35 SITE 1 AC1 4 CYS A 341 CYS A 344 HIS A 366 CYS A 369 SITE 1 AC2 4 CYS A 357 CYS A 361 CYS A 390 CYS A 393 SITE 1 AC3 4 CYS B 341 CYS B 344 HIS B 366 CYS B 369 SITE 1 AC4 4 CYS B 357 CYS B 361 CYS B 390 CYS B 393 CRYST1 59.518 59.518 95.853 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016802 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016802 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010433 0.00000