data_2YZA # _entry.id 2YZA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YZA pdb_00002yza 10.2210/pdb2yza/pdb RCSB RCSB027322 ? ? WWPDB D_1000027322 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2H6D _pdbx_database_related.details 'wild type' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YZA _pdbx_database_status.recvd_initial_deposition_date 2007-05-04 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saijo, S.' 1 'Takagi, T.' 2 'Yoshikawa, S.' 3 'Kishishita, S.' 4 'Shirouzu, M.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Structural basis for compound C inhibition of the human AMP-activated protein kinase alpha 2 subunit kinase domain' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 67 _citation.page_first 480 _citation.page_last 487 _citation.year 2011 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21543851 _citation.pdbx_database_id_DOI 10.1107/S0907444911010201 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Handa, N.' 1 ? primary 'Takagi, T.' 2 ? primary 'Saijo, S.' 3 ? primary 'Kishishita, S.' 4 ? primary 'Takaya, D.' 5 ? primary 'Toyama, M.' 6 ? primary 'Terada, T.' 7 ? primary 'Shirouzu, M.' 8 ? primary 'Suzuki, A.' 9 ? primary 'Lee, S.' 10 ? primary 'Yamauchi, T.' 11 ? primary 'Okada-Iwabu, M.' 12 ? primary 'Iwabu, M.' 13 ? primary 'Kadowaki, T.' 14 ? primary 'Minokoshi, Y.' 15 ? primary 'Yokoyama, S.' 16 ? # _cell.entry_id 2YZA _cell.length_a 39.187 _cell.length_b 67.336 _cell.length_c 50.651 _cell.angle_alpha 90.00 _cell.angle_beta 91.26 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2YZA _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;5'-AMP-activated protein kinase catalytic subunit alpha-2 ; 31571.730 1 2.7.11.1 T172D 'kinase domain' ? 2 water nat water 18.015 10 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;5'-AMP-activated protein kinase alpha-2 subunit, AMPK alpha-2 chain ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM MSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVAT LLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPE ; _entity_poly.pdbx_seq_one_letter_code_can ;GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM MSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVAT LLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 LYS n 1 4 HIS n 1 5 ASP n 1 6 GLY n 1 7 ARG n 1 8 VAL n 1 9 LYS n 1 10 ILE n 1 11 GLY n 1 12 HIS n 1 13 TYR n 1 14 VAL n 1 15 LEU n 1 16 GLY n 1 17 ASP n 1 18 THR n 1 19 LEU n 1 20 GLY n 1 21 VAL n 1 22 GLY n 1 23 THR n 1 24 PHE n 1 25 GLY n 1 26 LYS n 1 27 VAL n 1 28 LYS n 1 29 ILE n 1 30 GLY n 1 31 GLU n 1 32 HIS n 1 33 GLN n 1 34 LEU n 1 35 THR n 1 36 GLY n 1 37 HIS n 1 38 LYS n 1 39 VAL n 1 40 ALA n 1 41 VAL n 1 42 LYS n 1 43 ILE n 1 44 LEU n 1 45 ASN n 1 46 ARG n 1 47 GLN n 1 48 LYS n 1 49 ILE n 1 50 ARG n 1 51 SER n 1 52 LEU n 1 53 ASP n 1 54 VAL n 1 55 VAL n 1 56 GLY n 1 57 LYS n 1 58 ILE n 1 59 LYS n 1 60 ARG n 1 61 GLU n 1 62 ILE n 1 63 GLN n 1 64 ASN n 1 65 LEU n 1 66 LYS n 1 67 LEU n 1 68 PHE n 1 69 ARG n 1 70 HIS n 1 71 PRO n 1 72 HIS n 1 73 ILE n 1 74 ILE n 1 75 LYS n 1 76 LEU n 1 77 TYR n 1 78 GLN n 1 79 VAL n 1 80 ILE n 1 81 SER n 1 82 THR n 1 83 PRO n 1 84 THR n 1 85 ASP n 1 86 PHE n 1 87 PHE n 1 88 MET n 1 89 VAL n 1 90 MET n 1 91 GLU n 1 92 TYR n 1 93 VAL n 1 94 SER n 1 95 GLY n 1 96 GLY n 1 97 GLU n 1 98 LEU n 1 99 PHE n 1 100 ASP n 1 101 TYR n 1 102 ILE n 1 103 CYS n 1 104 LYS n 1 105 HIS n 1 106 GLY n 1 107 ARG n 1 108 VAL n 1 109 GLU n 1 110 GLU n 1 111 MET n 1 112 GLU n 1 113 ALA n 1 114 ARG n 1 115 ARG n 1 116 LEU n 1 117 PHE n 1 118 GLN n 1 119 GLN n 1 120 ILE n 1 121 LEU n 1 122 SER n 1 123 ALA n 1 124 VAL n 1 125 ASP n 1 126 TYR n 1 127 CYS n 1 128 HIS n 1 129 ARG n 1 130 HIS n 1 131 MET n 1 132 VAL n 1 133 VAL n 1 134 HIS n 1 135 ARG n 1 136 ASP n 1 137 LEU n 1 138 LYS n 1 139 PRO n 1 140 GLU n 1 141 ASN n 1 142 VAL n 1 143 LEU n 1 144 LEU n 1 145 ASP n 1 146 ALA n 1 147 HIS n 1 148 MET n 1 149 ASN n 1 150 ALA n 1 151 LYS n 1 152 ILE n 1 153 ALA n 1 154 ASP n 1 155 PHE n 1 156 GLY n 1 157 LEU n 1 158 SER n 1 159 ASN n 1 160 MET n 1 161 MET n 1 162 SER n 1 163 ASP n 1 164 GLY n 1 165 GLU n 1 166 PHE n 1 167 LEU n 1 168 ARG n 1 169 ASP n 1 170 SER n 1 171 CYS n 1 172 GLY n 1 173 SER n 1 174 PRO n 1 175 ASN n 1 176 TYR n 1 177 ALA n 1 178 ALA n 1 179 PRO n 1 180 GLU n 1 181 VAL n 1 182 ILE n 1 183 SER n 1 184 GLY n 1 185 ARG n 1 186 LEU n 1 187 TYR n 1 188 ALA n 1 189 GLY n 1 190 PRO n 1 191 GLU n 1 192 VAL n 1 193 ASP n 1 194 ILE n 1 195 TRP n 1 196 SER n 1 197 CYS n 1 198 GLY n 1 199 VAL n 1 200 ILE n 1 201 LEU n 1 202 TYR n 1 203 ALA n 1 204 LEU n 1 205 LEU n 1 206 CYS n 1 207 GLY n 1 208 THR n 1 209 LEU n 1 210 PRO n 1 211 PHE n 1 212 ASP n 1 213 ASP n 1 214 GLU n 1 215 HIS n 1 216 VAL n 1 217 PRO n 1 218 THR n 1 219 LEU n 1 220 PHE n 1 221 LYS n 1 222 LYS n 1 223 ILE n 1 224 ARG n 1 225 GLY n 1 226 GLY n 1 227 VAL n 1 228 PHE n 1 229 TYR n 1 230 ILE n 1 231 PRO n 1 232 GLU n 1 233 TYR n 1 234 LEU n 1 235 ASN n 1 236 ARG n 1 237 SER n 1 238 VAL n 1 239 ALA n 1 240 THR n 1 241 LEU n 1 242 LEU n 1 243 MET n 1 244 HIS n 1 245 MET n 1 246 LEU n 1 247 GLN n 1 248 VAL n 1 249 ASP n 1 250 PRO n 1 251 LEU n 1 252 LYS n 1 253 ARG n 1 254 ALA n 1 255 THR n 1 256 ILE n 1 257 LYS n 1 258 ASP n 1 259 ILE n 1 260 ARG n 1 261 GLU n 1 262 HIS n 1 263 GLU n 1 264 TRP n 1 265 PHE n 1 266 LYS n 1 267 GLN n 1 268 ASP n 1 269 LEU n 1 270 PRO n 1 271 SER n 1 272 TYR n 1 273 LEU n 1 274 PHE n 1 275 PRO n 1 276 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'PRKAA2, AMPK, AMPK2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell-free protein synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PX060824-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AAPK2_HUMAN _struct_ref.pdbx_db_accession P54646 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPE ; _struct_ref.pdbx_align_begin 6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YZA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 276 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P54646 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 279 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 279 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YZA GLY A 1 ? UNP P54646 ? ? 'expression tag' 4 1 1 2YZA SER A 2 ? UNP P54646 ? ? 'expression tag' 5 2 1 2YZA ASP A 169 ? UNP P54646 THR 172 'engineered mutation' 172 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YZA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.9 _exptl_crystal_grow.pdbx_details ;0.1M Tris-HCl pH8.9, 16% PEG4000, 15% isopropanol, 0.1M Ammonium sulfate, Protein solution: 5mM AMPPNP, 5mM Magnesium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2006-09-28 _diffrn_detector.details 'rhodium coated mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'fixed exit Si double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 2YZA _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 25.0 _reflns.number_all ? _reflns.number_obs 4913 _reflns.percent_possible_obs 94.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.106 _reflns.pdbx_netI_over_sigmaI 11.5 _reflns.B_iso_Wilson_estimate 48.3 _reflns.pdbx_redundancy 3.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.05 _reflns_shell.percent_possible_all 51.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.251 _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 126 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2YZA _refine.ls_number_reflns_obs 4422 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.0 _refine.ls_d_res_high 3.02 _refine.ls_percent_reflns_obs 93.31 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.227 _refine.ls_R_factor_R_free 0.308 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 484 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.887 _refine.correlation_coeff_Fo_to_Fc_free 0.769 _refine.B_iso_mean 21.753 _refine.aniso_B[1][1] 0.99 _refine.aniso_B[2][2] 0.15 _refine.aniso_B[3][3] -1.11 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.51 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2H6D' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.673 _refine.overall_SU_ML 0.485 _refine.overall_SU_B 25.942 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2063 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 2073 _refine_hist.d_res_high 3.02 _refine_hist.d_res_low 25.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 2112 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.873 1.962 ? 2854 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.405 5.000 ? 256 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.402 22.826 ? 92 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.713 15.000 ? 374 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.511 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.055 0.200 ? 319 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1568 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.166 0.200 ? 861 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.295 0.200 ? 1417 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.092 0.200 ? 47 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.168 0.200 ? 45 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.086 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.177 1.500 ? 1321 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.315 2.000 ? 2070 'X-RAY DIFFRACTION' ? r_scbond_it 0.260 3.000 ? 891 'X-RAY DIFFRACTION' ? r_scangle_it 0.444 4.500 ? 784 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.02 _refine_ls_shell.d_res_low 3.094 _refine_ls_shell.number_reflns_R_work 171 _refine_ls_shell.R_factor_R_work 0.241 _refine_ls_shell.percent_reflns_obs 49.47 _refine_ls_shell.R_factor_R_free 0.348 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 17 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 188 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2YZA _struct.title ;Crystal structure of kinase domain of Human 5'-AMP-activated protein kinase alpha-2 subunit mutant (T172D) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YZA _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;Signaling protein, Serine/threonine protein kinase, Phosphorylation, ATP-binding, Nucleotide-binding, Cholesterol biosynthesis, Fatty acid biosynthesis, Lipid synthesis, glucose metabolism, Magnesium, Metal-binding, Serine/threonine-protein kinase, Steroid biosynthesis, Transferase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 46 ? LEU A 52 ? ARG A 49 LEU A 55 1 ? 7 HELX_P HELX_P2 2 VAL A 54 ? PHE A 68 ? VAL A 57 PHE A 71 1 ? 15 HELX_P HELX_P3 3 GLU A 97 ? GLY A 106 ? GLU A 100 GLY A 109 1 ? 10 HELX_P HELX_P4 4 GLU A 109 ? MET A 131 ? GLU A 112 MET A 134 1 ? 23 HELX_P HELX_P5 5 LYS A 138 ? GLU A 140 ? LYS A 141 GLU A 143 5 ? 3 HELX_P HELX_P6 6 ALA A 178 ? SER A 183 ? ALA A 181 SER A 186 1 ? 6 HELX_P HELX_P7 7 ALA A 188 ? GLY A 207 ? ALA A 191 GLY A 210 1 ? 20 HELX_P HELX_P8 8 HIS A 215 ? GLY A 226 ? HIS A 218 GLY A 229 1 ? 12 HELX_P HELX_P9 9 ASN A 235 ? LEU A 246 ? ASN A 238 LEU A 249 1 ? 12 HELX_P HELX_P10 10 THR A 255 ? GLU A 261 ? THR A 258 GLU A 264 1 ? 7 HELX_P HELX_P11 11 HIS A 262 ? GLN A 267 ? HIS A 265 GLN A 270 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 9 ? ILE A 10 ? LYS A 12 ILE A 13 A 2 TYR A 13 ? VAL A 21 ? TYR A 16 VAL A 24 A 3 LYS A 26 ? HIS A 32 ? LYS A 29 HIS A 35 A 4 LYS A 38 ? ASN A 45 ? LYS A 41 ASN A 48 A 5 ASP A 85 ? GLU A 91 ? ASP A 88 GLU A 94 A 6 LEU A 76 ? SER A 81 ? LEU A 79 SER A 84 B 1 VAL A 142 ? LEU A 144 ? VAL A 145 LEU A 147 B 2 ALA A 150 ? ILE A 152 ? ALA A 153 ILE A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 10 ? N ILE A 13 O TYR A 13 ? O TYR A 16 A 2 3 N GLY A 16 ? N GLY A 19 O ILE A 29 ? O ILE A 32 A 3 4 N LYS A 26 ? N LYS A 29 O ILE A 43 ? O ILE A 46 A 4 5 N ALA A 40 ? N ALA A 43 O MET A 90 ? O MET A 93 A 5 6 O PHE A 87 ? O PHE A 90 N ILE A 80 ? N ILE A 83 B 1 2 N LEU A 143 ? N LEU A 146 O LYS A 151 ? O LYS A 154 # _database_PDB_matrix.entry_id 2YZA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YZA _atom_sites.fract_transf_matrix[1][1] 0.025519 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000561 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014851 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019748 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 4 ? ? ? A . n A 1 2 SER 2 5 ? ? ? A . n A 1 3 LYS 3 6 ? ? ? A . n A 1 4 HIS 4 7 ? ? ? A . n A 1 5 ASP 5 8 ? ? ? A . n A 1 6 GLY 6 9 ? ? ? A . n A 1 7 ARG 7 10 10 ARG ARG A . n A 1 8 VAL 8 11 11 VAL VAL A . n A 1 9 LYS 9 12 12 LYS LYS A . n A 1 10 ILE 10 13 13 ILE ILE A . n A 1 11 GLY 11 14 14 GLY GLY A . n A 1 12 HIS 12 15 15 HIS HIS A . n A 1 13 TYR 13 16 16 TYR TYR A . n A 1 14 VAL 14 17 17 VAL VAL A . n A 1 15 LEU 15 18 18 LEU LEU A . n A 1 16 GLY 16 19 19 GLY GLY A . n A 1 17 ASP 17 20 20 ASP ASP A . n A 1 18 THR 18 21 21 THR THR A . n A 1 19 LEU 19 22 22 LEU LEU A . n A 1 20 GLY 20 23 23 GLY GLY A . n A 1 21 VAL 21 24 24 VAL VAL A . n A 1 22 GLY 22 25 25 GLY GLY A . n A 1 23 THR 23 26 26 THR THR A . n A 1 24 PHE 24 27 27 PHE PHE A . n A 1 25 GLY 25 28 28 GLY GLY A . n A 1 26 LYS 26 29 29 LYS LYS A . n A 1 27 VAL 27 30 30 VAL VAL A . n A 1 28 LYS 28 31 31 LYS LYS A . n A 1 29 ILE 29 32 32 ILE ILE A . n A 1 30 GLY 30 33 33 GLY GLY A . n A 1 31 GLU 31 34 34 GLU GLU A . n A 1 32 HIS 32 35 35 HIS HIS A . n A 1 33 GLN 33 36 36 GLN GLN A . n A 1 34 LEU 34 37 37 LEU LEU A . n A 1 35 THR 35 38 38 THR THR A . n A 1 36 GLY 36 39 39 GLY GLY A . n A 1 37 HIS 37 40 40 HIS HIS A . n A 1 38 LYS 38 41 41 LYS LYS A . n A 1 39 VAL 39 42 42 VAL VAL A . n A 1 40 ALA 40 43 43 ALA ALA A . n A 1 41 VAL 41 44 44 VAL VAL A . n A 1 42 LYS 42 45 45 LYS LYS A . n A 1 43 ILE 43 46 46 ILE ILE A . n A 1 44 LEU 44 47 47 LEU LEU A . n A 1 45 ASN 45 48 48 ASN ASN A . n A 1 46 ARG 46 49 49 ARG ARG A . n A 1 47 GLN 47 50 50 GLN GLN A . n A 1 48 LYS 48 51 51 LYS LYS A . n A 1 49 ILE 49 52 52 ILE ILE A . n A 1 50 ARG 50 53 53 ARG ARG A . n A 1 51 SER 51 54 54 SER SER A . n A 1 52 LEU 52 55 55 LEU LEU A . n A 1 53 ASP 53 56 56 ASP ASP A . n A 1 54 VAL 54 57 57 VAL VAL A . n A 1 55 VAL 55 58 58 VAL VAL A . n A 1 56 GLY 56 59 59 GLY GLY A . n A 1 57 LYS 57 60 60 LYS LYS A . n A 1 58 ILE 58 61 61 ILE ILE A . n A 1 59 LYS 59 62 62 LYS LYS A . n A 1 60 ARG 60 63 63 ARG ARG A . n A 1 61 GLU 61 64 64 GLU GLU A . n A 1 62 ILE 62 65 65 ILE ILE A . n A 1 63 GLN 63 66 66 GLN GLN A . n A 1 64 ASN 64 67 67 ASN ASN A . n A 1 65 LEU 65 68 68 LEU LEU A . n A 1 66 LYS 66 69 69 LYS LYS A . n A 1 67 LEU 67 70 70 LEU LEU A . n A 1 68 PHE 68 71 71 PHE PHE A . n A 1 69 ARG 69 72 72 ARG ARG A . n A 1 70 HIS 70 73 73 HIS HIS A . n A 1 71 PRO 71 74 74 PRO PRO A . n A 1 72 HIS 72 75 75 HIS HIS A . n A 1 73 ILE 73 76 76 ILE ILE A . n A 1 74 ILE 74 77 77 ILE ILE A . n A 1 75 LYS 75 78 78 LYS LYS A . n A 1 76 LEU 76 79 79 LEU LEU A . n A 1 77 TYR 77 80 80 TYR TYR A . n A 1 78 GLN 78 81 81 GLN GLN A . n A 1 79 VAL 79 82 82 VAL VAL A . n A 1 80 ILE 80 83 83 ILE ILE A . n A 1 81 SER 81 84 84 SER SER A . n A 1 82 THR 82 85 85 THR THR A . n A 1 83 PRO 83 86 86 PRO PRO A . n A 1 84 THR 84 87 87 THR THR A . n A 1 85 ASP 85 88 88 ASP ASP A . n A 1 86 PHE 86 89 89 PHE PHE A . n A 1 87 PHE 87 90 90 PHE PHE A . n A 1 88 MET 88 91 91 MET MET A . n A 1 89 VAL 89 92 92 VAL VAL A . n A 1 90 MET 90 93 93 MET MET A . n A 1 91 GLU 91 94 94 GLU GLU A . n A 1 92 TYR 92 95 95 TYR TYR A . n A 1 93 VAL 93 96 96 VAL VAL A . n A 1 94 SER 94 97 97 SER SER A . n A 1 95 GLY 95 98 98 GLY GLY A . n A 1 96 GLY 96 99 99 GLY GLY A . n A 1 97 GLU 97 100 100 GLU GLU A . n A 1 98 LEU 98 101 101 LEU LEU A . n A 1 99 PHE 99 102 102 PHE PHE A . n A 1 100 ASP 100 103 103 ASP ASP A . n A 1 101 TYR 101 104 104 TYR TYR A . n A 1 102 ILE 102 105 105 ILE ILE A . n A 1 103 CYS 103 106 106 CYS CYS A . n A 1 104 LYS 104 107 107 LYS LYS A . n A 1 105 HIS 105 108 108 HIS HIS A . n A 1 106 GLY 106 109 109 GLY GLY A . n A 1 107 ARG 107 110 110 ARG ARG A . n A 1 108 VAL 108 111 111 VAL VAL A . n A 1 109 GLU 109 112 112 GLU GLU A . n A 1 110 GLU 110 113 113 GLU GLU A . n A 1 111 MET 111 114 114 MET MET A . n A 1 112 GLU 112 115 115 GLU GLU A . n A 1 113 ALA 113 116 116 ALA ALA A . n A 1 114 ARG 114 117 117 ARG ARG A . n A 1 115 ARG 115 118 118 ARG ARG A . n A 1 116 LEU 116 119 119 LEU LEU A . n A 1 117 PHE 117 120 120 PHE PHE A . n A 1 118 GLN 118 121 121 GLN GLN A . n A 1 119 GLN 119 122 122 GLN GLN A . n A 1 120 ILE 120 123 123 ILE ILE A . n A 1 121 LEU 121 124 124 LEU LEU A . n A 1 122 SER 122 125 125 SER SER A . n A 1 123 ALA 123 126 126 ALA ALA A . n A 1 124 VAL 124 127 127 VAL VAL A . n A 1 125 ASP 125 128 128 ASP ASP A . n A 1 126 TYR 126 129 129 TYR TYR A . n A 1 127 CYS 127 130 130 CYS CYS A . n A 1 128 HIS 128 131 131 HIS HIS A . n A 1 129 ARG 129 132 132 ARG ARG A . n A 1 130 HIS 130 133 133 HIS HIS A . n A 1 131 MET 131 134 134 MET MET A . n A 1 132 VAL 132 135 135 VAL VAL A . n A 1 133 VAL 133 136 136 VAL VAL A . n A 1 134 HIS 134 137 137 HIS HIS A . n A 1 135 ARG 135 138 138 ARG ARG A . n A 1 136 ASP 136 139 139 ASP ASP A . n A 1 137 LEU 137 140 140 LEU LEU A . n A 1 138 LYS 138 141 141 LYS LYS A . n A 1 139 PRO 139 142 142 PRO PRO A . n A 1 140 GLU 140 143 143 GLU GLU A . n A 1 141 ASN 141 144 144 ASN ASN A . n A 1 142 VAL 142 145 145 VAL VAL A . n A 1 143 LEU 143 146 146 LEU LEU A . n A 1 144 LEU 144 147 147 LEU LEU A . n A 1 145 ASP 145 148 148 ASP ASP A . n A 1 146 ALA 146 149 149 ALA ALA A . n A 1 147 HIS 147 150 150 HIS HIS A . n A 1 148 MET 148 151 151 MET MET A . n A 1 149 ASN 149 152 152 ASN ASN A . n A 1 150 ALA 150 153 153 ALA ALA A . n A 1 151 LYS 151 154 154 LYS LYS A . n A 1 152 ILE 152 155 155 ILE ILE A . n A 1 153 ALA 153 156 156 ALA ALA A . n A 1 154 ASP 154 157 157 ASP ASP A . n A 1 155 PHE 155 158 158 PHE PHE A . n A 1 156 GLY 156 159 159 GLY GLY A . n A 1 157 LEU 157 160 160 LEU LEU A . n A 1 158 SER 158 161 161 SER SER A . n A 1 159 ASN 159 162 162 ASN ASN A . n A 1 160 MET 160 163 163 MET MET A . n A 1 161 MET 161 164 164 MET MET A . n A 1 162 SER 162 165 165 SER SER A . n A 1 163 ASP 163 166 166 ASP ASP A . n A 1 164 GLY 164 167 ? ? ? A . n A 1 165 GLU 165 168 ? ? ? A . n A 1 166 PHE 166 169 ? ? ? A . n A 1 167 LEU 167 170 ? ? ? A . n A 1 168 ARG 168 171 ? ? ? A . n A 1 169 ASP 169 172 ? ? ? A . n A 1 170 SER 170 173 ? ? ? A . n A 1 171 CYS 171 174 ? ? ? A . n A 1 172 GLY 172 175 ? ? ? A . n A 1 173 SER 173 176 ? ? ? A . n A 1 174 PRO 174 177 ? ? ? A . n A 1 175 ASN 175 178 178 ASN ASN A . n A 1 176 TYR 176 179 179 TYR TYR A . n A 1 177 ALA 177 180 180 ALA ALA A . n A 1 178 ALA 178 181 181 ALA ALA A . n A 1 179 PRO 179 182 182 PRO PRO A . n A 1 180 GLU 180 183 183 GLU GLU A . n A 1 181 VAL 181 184 184 VAL VAL A . n A 1 182 ILE 182 185 185 ILE ILE A . n A 1 183 SER 183 186 186 SER SER A . n A 1 184 GLY 184 187 187 GLY GLY A . n A 1 185 ARG 185 188 188 ARG ARG A . n A 1 186 LEU 186 189 189 LEU LEU A . n A 1 187 TYR 187 190 190 TYR TYR A . n A 1 188 ALA 188 191 191 ALA ALA A . n A 1 189 GLY 189 192 192 GLY GLY A . n A 1 190 PRO 190 193 193 PRO PRO A . n A 1 191 GLU 191 194 194 GLU GLU A . n A 1 192 VAL 192 195 195 VAL VAL A . n A 1 193 ASP 193 196 196 ASP ASP A . n A 1 194 ILE 194 197 197 ILE ILE A . n A 1 195 TRP 195 198 198 TRP TRP A . n A 1 196 SER 196 199 199 SER SER A . n A 1 197 CYS 197 200 200 CYS CYS A . n A 1 198 GLY 198 201 201 GLY GLY A . n A 1 199 VAL 199 202 202 VAL VAL A . n A 1 200 ILE 200 203 203 ILE ILE A . n A 1 201 LEU 201 204 204 LEU LEU A . n A 1 202 TYR 202 205 205 TYR TYR A . n A 1 203 ALA 203 206 206 ALA ALA A . n A 1 204 LEU 204 207 207 LEU LEU A . n A 1 205 LEU 205 208 208 LEU LEU A . n A 1 206 CYS 206 209 209 CYS CYS A . n A 1 207 GLY 207 210 210 GLY GLY A . n A 1 208 THR 208 211 211 THR THR A . n A 1 209 LEU 209 212 212 LEU LEU A . n A 1 210 PRO 210 213 213 PRO PRO A . n A 1 211 PHE 211 214 214 PHE PHE A . n A 1 212 ASP 212 215 215 ASP ASP A . n A 1 213 ASP 213 216 216 ASP ASP A . n A 1 214 GLU 214 217 217 GLU GLU A . n A 1 215 HIS 215 218 218 HIS HIS A . n A 1 216 VAL 216 219 219 VAL VAL A . n A 1 217 PRO 217 220 220 PRO PRO A . n A 1 218 THR 218 221 221 THR THR A . n A 1 219 LEU 219 222 222 LEU LEU A . n A 1 220 PHE 220 223 223 PHE PHE A . n A 1 221 LYS 221 224 224 LYS LYS A . n A 1 222 LYS 222 225 225 LYS LYS A . n A 1 223 ILE 223 226 226 ILE ILE A . n A 1 224 ARG 224 227 227 ARG ARG A . n A 1 225 GLY 225 228 228 GLY GLY A . n A 1 226 GLY 226 229 229 GLY GLY A . n A 1 227 VAL 227 230 230 VAL VAL A . n A 1 228 PHE 228 231 231 PHE PHE A . n A 1 229 TYR 229 232 232 TYR TYR A . n A 1 230 ILE 230 233 233 ILE ILE A . n A 1 231 PRO 231 234 234 PRO PRO A . n A 1 232 GLU 232 235 235 GLU GLU A . n A 1 233 TYR 233 236 236 TYR TYR A . n A 1 234 LEU 234 237 237 LEU LEU A . n A 1 235 ASN 235 238 238 ASN ASN A . n A 1 236 ARG 236 239 239 ARG ARG A . n A 1 237 SER 237 240 240 SER SER A . n A 1 238 VAL 238 241 241 VAL VAL A . n A 1 239 ALA 239 242 242 ALA ALA A . n A 1 240 THR 240 243 243 THR THR A . n A 1 241 LEU 241 244 244 LEU LEU A . n A 1 242 LEU 242 245 245 LEU LEU A . n A 1 243 MET 243 246 246 MET MET A . n A 1 244 HIS 244 247 247 HIS HIS A . n A 1 245 MET 245 248 248 MET MET A . n A 1 246 LEU 246 249 249 LEU LEU A . n A 1 247 GLN 247 250 250 GLN GLN A . n A 1 248 VAL 248 251 251 VAL VAL A . n A 1 249 ASP 249 252 252 ASP ASP A . n A 1 250 PRO 250 253 253 PRO PRO A . n A 1 251 LEU 251 254 254 LEU LEU A . n A 1 252 LYS 252 255 255 LYS LYS A . n A 1 253 ARG 253 256 256 ARG ARG A . n A 1 254 ALA 254 257 257 ALA ALA A . n A 1 255 THR 255 258 258 THR THR A . n A 1 256 ILE 256 259 259 ILE ILE A . n A 1 257 LYS 257 260 260 LYS LYS A . n A 1 258 ASP 258 261 261 ASP ASP A . n A 1 259 ILE 259 262 262 ILE ILE A . n A 1 260 ARG 260 263 263 ARG ARG A . n A 1 261 GLU 261 264 264 GLU GLU A . n A 1 262 HIS 262 265 265 HIS HIS A . n A 1 263 GLU 263 266 266 GLU GLU A . n A 1 264 TRP 264 267 267 TRP TRP A . n A 1 265 PHE 265 268 268 PHE PHE A . n A 1 266 LYS 266 269 269 LYS LYS A . n A 1 267 GLN 267 270 270 GLN GLN A . n A 1 268 ASP 268 271 271 ASP ASP A . n A 1 269 LEU 269 272 272 LEU LEU A . n A 1 270 PRO 270 273 273 PRO PRO A . n A 1 271 SER 271 274 274 SER SER A . n A 1 272 TYR 272 275 275 TYR TYR A . n A 1 273 LEU 273 276 276 LEU LEU A . n A 1 274 PHE 274 277 277 PHE PHE A . n A 1 275 PRO 275 278 278 PRO PRO A . n A 1 276 GLU 276 279 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 600 600 HOH HOH A . B 2 HOH 2 601 601 HOH HOH A . B 2 HOH 3 602 602 HOH HOH A . B 2 HOH 4 603 603 HOH HOH A . B 2 HOH 5 604 604 HOH HOH A . B 2 HOH 6 605 605 HOH HOH A . B 2 HOH 7 606 606 HOH HOH A . B 2 HOH 8 607 607 HOH HOH A . B 2 HOH 9 608 608 HOH HOH A . B 2 HOH 10 609 609 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-11 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 BSS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 86 ? ? -53.07 -9.04 2 1 ASP A 157 ? ? -108.81 78.71 3 1 SER A 165 ? ? -135.21 -32.85 4 1 TYR A 179 ? ? -121.55 -51.89 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 50 ? CG ? A GLN 47 CG 2 1 Y 1 A GLN 50 ? CD ? A GLN 47 CD 3 1 Y 1 A GLN 50 ? OE1 ? A GLN 47 OE1 4 1 Y 1 A GLN 50 ? NE2 ? A GLN 47 NE2 5 1 Y 1 A LYS 60 ? CG ? A LYS 57 CG 6 1 Y 1 A LYS 60 ? CD ? A LYS 57 CD 7 1 Y 1 A LYS 60 ? CE ? A LYS 57 CE 8 1 Y 1 A LYS 60 ? NZ ? A LYS 57 NZ 9 1 Y 1 A ARG 138 ? CG ? A ARG 135 CG 10 1 Y 1 A ARG 138 ? CD ? A ARG 135 CD 11 1 Y 1 A ARG 138 ? NE ? A ARG 135 NE 12 1 Y 1 A ARG 138 ? CZ ? A ARG 135 CZ 13 1 Y 1 A ARG 138 ? NH1 ? A ARG 135 NH1 14 1 Y 1 A ARG 138 ? NH2 ? A ARG 135 NH2 15 1 Y 1 A ASN 178 ? CG ? A ASN 175 CG 16 1 Y 1 A ASN 178 ? OD1 ? A ASN 175 OD1 17 1 Y 1 A ASN 178 ? ND2 ? A ASN 175 ND2 18 1 Y 1 A GLU 217 ? CG ? A GLU 214 CG 19 1 Y 1 A GLU 217 ? CD ? A GLU 214 CD 20 1 Y 1 A GLU 217 ? OE1 ? A GLU 214 OE1 21 1 Y 1 A GLU 217 ? OE2 ? A GLU 214 OE2 22 1 Y 1 A GLU 235 ? CG ? A GLU 232 CG 23 1 Y 1 A GLU 235 ? CD ? A GLU 232 CD 24 1 Y 1 A GLU 235 ? OE1 ? A GLU 232 OE1 25 1 Y 1 A GLU 235 ? OE2 ? A GLU 232 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 4 ? A GLY 1 2 1 Y 1 A SER 5 ? A SER 2 3 1 Y 1 A LYS 6 ? A LYS 3 4 1 Y 1 A HIS 7 ? A HIS 4 5 1 Y 1 A ASP 8 ? A ASP 5 6 1 Y 1 A GLY 9 ? A GLY 6 7 1 Y 1 A GLY 167 ? A GLY 164 8 1 Y 1 A GLU 168 ? A GLU 165 9 1 Y 1 A PHE 169 ? A PHE 166 10 1 Y 1 A LEU 170 ? A LEU 167 11 1 Y 1 A ARG 171 ? A ARG 168 12 1 Y 1 A ASP 172 ? A ASP 169 13 1 Y 1 A SER 173 ? A SER 170 14 1 Y 1 A CYS 174 ? A CYS 171 15 1 Y 1 A GLY 175 ? A GLY 172 16 1 Y 1 A SER 176 ? A SER 173 17 1 Y 1 A PRO 177 ? A PRO 174 18 1 Y 1 A GLU 279 ? A GLU 276 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2H6D _pdbx_initial_refinement_model.details 'PDB ENTRY 2H6D' #