HEADER HYDROLASE 17-JUN-07 2Z4G TITLE HISTIDINOL PHOSPHATE PHOSPHATASE FROM THERMUS THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINOL PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.3.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS METAL-DEPENDENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.OMI REVDAT 4 01-NOV-23 2Z4G 1 REMARK LINK REVDAT 3 13-JUL-11 2Z4G 1 VERSN REVDAT 2 24-FEB-09 2Z4G 1 VERSN REVDAT 1 27-NOV-07 2Z4G 0 JRNL AUTH R.OMI,M.GOTO,I.MIYAHARA,M.MANZOKU,A.EBIHARA,K.HIROTSU JRNL TITL CRYSTAL STRUCTURE OF MONOFUNCTIONAL HISTIDINOL PHOSPHATE JRNL TITL 2 PHOSPHATASE FROM THERMUS THERMOPHILUS HB8. JRNL REF BIOCHEMISTRY V. 46 12618 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17929834 JRNL DOI 10.1021/BI701204R REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2434599.480 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 57245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 5818 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 8263 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 944 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4187 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 413 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.06000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : 1.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.24 REMARK 3 ESD FROM SIGMAA (A) : 0.31 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.37 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.019 REMARK 3 BOND ANGLES (DEGREES) : 1.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.340 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.130 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.530 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 19.530; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 13.550; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 56.62 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESOLUTION-DEPENDENT WEIGHTING SCHEME, REMARK 3 BULK SOLVENT MODEL USED REMARK 4 REMARK 4 2Z4G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000027508. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57365 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2YXO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH8.5, 0.68M SODIUM REMARK 280 MALONATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.48050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.39300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.48050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.39300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 9270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -323.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 84.96100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 96.78600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 264 REMARK 465 ARG A 265 REMARK 465 ALA A 266 REMARK 465 SER A 267 REMARK 465 ALA B 266 REMARK 465 SER B 267 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 48 CG CD OE1 OE2 REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 1656 O HOH B 1656 2665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 97 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 164 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 164 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 5 88.57 -151.56 REMARK 500 PRO A 9 1.60 -62.92 REMARK 500 ASP A 46 57.51 38.71 REMARK 500 HIS A 154 80.58 7.47 REMARK 500 ASP B 46 54.50 37.27 REMARK 500 ALA B 70 57.95 -119.42 REMARK 500 HIS B 154 79.17 9.22 REMARK 500 ASP B 156 41.62 -104.03 REMARK 500 LYS B 160 -56.95 -28.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 203 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 THE FE ION IS NOT IDENTIFIED TO BE FE(III) OR FE(II). REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 503 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 5 NE2 REMARK 620 2 HIS A 7 NE2 92.4 REMARK 620 3 GLU A 80 OE1 93.4 94.2 REMARK 620 4 ASP A 224 OD1 79.4 84.1 172.5 REMARK 620 5 HOH A 630 O 87.3 178.1 87.7 94.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 13 NE2 REMARK 620 2 HIS A 38 NE2 105.2 REMARK 620 3 HIS A 226 NE2 97.2 128.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE2 REMARK 620 2 HIS A 108 NE2 91.8 REMARK 620 3 HIS A 154 NE2 95.5 87.3 REMARK 620 4 HOH A 630 O 79.7 169.8 99.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B1503 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 5 NE2 REMARK 620 2 HIS B 7 NE2 91.1 REMARK 620 3 GLU B 80 OE1 87.1 91.9 REMARK 620 4 ASP B 224 OD1 84.2 79.8 167.8 REMARK 620 5 HOH B1648 O 94.6 168.0 98.9 90.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 13 NE2 REMARK 620 2 HIS B 38 NE2 100.4 REMARK 620 3 HIS B 226 NE2 107.3 126.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B1502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 80 OE2 REMARK 620 2 HIS B 108 NE2 97.2 REMARK 620 3 HIS B 154 NE2 96.1 88.0 REMARK 620 4 HOH B1648 O 82.1 179.1 92.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YXO RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH SULFATE REMARK 900 RELATED ID: 2YZ5 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH PHOSPHATE DBREF 2Z4G A 1 267 UNP Q5SLG2 Q5SLG2_THET8 1 267 DBREF 2Z4G B 1 267 UNP Q5SLG2 Q5SLG2_THET8 1 267 SEQRES 1 A 267 MET VAL ASP SER HIS VAL HIS THR PRO LEU CYS GLY HIS SEQRES 2 A 267 ALA GLU GLY HIS PRO GLU ALA TYR LEU GLU GLU ALA ARG SEQRES 3 A 267 ALA LYS GLY LEU LYS GLY VAL VAL PHE THR ASP HIS SER SEQRES 4 A 267 PRO MET PRO PRO TRP TYR ASP PRO GLU SER ARG MET ARG SEQRES 5 A 267 LEU GLU ALA LEU PRO PHE TYR LEU LEU ALA LEU GLU ARG SEQRES 6 A 267 VAL ARG GLU ARG ALA GLN ASP LEU TYR VAL GLY ILE GLY SEQRES 7 A 267 LEU GLU ALA ASP PHE HIS PRO GLY THR GLU GLY PHE LEU SEQRES 8 A 267 ALA GLN LEU LEU ARG ARG TYR PRO PHE ASP TYR VAL ILE SEQRES 9 A 267 GLY SER VAL HIS TYR LEU GLY ALA TRP PRO LEU ASP HIS SEQRES 10 A 267 PRO ASP HIS GLN GLU GLU TYR ALA TRP ARG ASP LEU LYS SEQRES 11 A 267 GLU VAL PHE ARG ALA TYR PHE GLN GLU VAL GLU LYS ALA SEQRES 12 A 267 ALA ARG SER GLY LEU PHE HIS ALA ILE GLY HIS LEU ASP SEQRES 13 A 267 LEU PRO LYS LYS PHE GLY HIS ARG LEU PRO GLU GLU ALA SEQRES 14 A 267 LEU LEU GLU LEU ALA GLU PRO ALA LEU ARG ALA VAL ALA SEQRES 15 A 267 GLU ALA GLY LEU PHE LEU ASP VAL ASN THR ALA GLY LEU SEQRES 16 A 267 ARG ARG PRO ALA LYS GLU VAL TYR PRO ALA PRO ALA LEU SEQRES 17 A 267 LEU ARG ARG ALA ARG GLU LEU GLY ILE GLY LEU VAL LEU SEQRES 18 A 267 GLY SER ASP ALA HIS ARG PRO GLU GLU VAL GLY PHE ALA SEQRES 19 A 267 PHE PRO GLU VAL GLN ALA LEU LEU ALA GLY LEU GLY PHE SEQRES 20 A 267 ARG GLU ALA TYR TYR PHE VAL GLU GLY SER PRO VAL ALA SEQRES 21 A 267 TYR PRO LEU SER ARG ALA SER SEQRES 1 B 267 MET VAL ASP SER HIS VAL HIS THR PRO LEU CYS GLY HIS SEQRES 2 B 267 ALA GLU GLY HIS PRO GLU ALA TYR LEU GLU GLU ALA ARG SEQRES 3 B 267 ALA LYS GLY LEU LYS GLY VAL VAL PHE THR ASP HIS SER SEQRES 4 B 267 PRO MET PRO PRO TRP TYR ASP PRO GLU SER ARG MET ARG SEQRES 5 B 267 LEU GLU ALA LEU PRO PHE TYR LEU LEU ALA LEU GLU ARG SEQRES 6 B 267 VAL ARG GLU ARG ALA GLN ASP LEU TYR VAL GLY ILE GLY SEQRES 7 B 267 LEU GLU ALA ASP PHE HIS PRO GLY THR GLU GLY PHE LEU SEQRES 8 B 267 ALA GLN LEU LEU ARG ARG TYR PRO PHE ASP TYR VAL ILE SEQRES 9 B 267 GLY SER VAL HIS TYR LEU GLY ALA TRP PRO LEU ASP HIS SEQRES 10 B 267 PRO ASP HIS GLN GLU GLU TYR ALA TRP ARG ASP LEU LYS SEQRES 11 B 267 GLU VAL PHE ARG ALA TYR PHE GLN GLU VAL GLU LYS ALA SEQRES 12 B 267 ALA ARG SER GLY LEU PHE HIS ALA ILE GLY HIS LEU ASP SEQRES 13 B 267 LEU PRO LYS LYS PHE GLY HIS ARG LEU PRO GLU GLU ALA SEQRES 14 B 267 LEU LEU GLU LEU ALA GLU PRO ALA LEU ARG ALA VAL ALA SEQRES 15 B 267 GLU ALA GLY LEU PHE LEU ASP VAL ASN THR ALA GLY LEU SEQRES 16 B 267 ARG ARG PRO ALA LYS GLU VAL TYR PRO ALA PRO ALA LEU SEQRES 17 B 267 LEU ARG ARG ALA ARG GLU LEU GLY ILE GLY LEU VAL LEU SEQRES 18 B 267 GLY SER ASP ALA HIS ARG PRO GLU GLU VAL GLY PHE ALA SEQRES 19 B 267 PHE PRO GLU VAL GLN ALA LEU LEU ALA GLY LEU GLY PHE SEQRES 20 B 267 ARG GLU ALA TYR TYR PHE VAL GLU GLY SER PRO VAL ALA SEQRES 21 B 267 TYR PRO LEU SER ARG ALA SER HET ZN A 501 1 HET FE A 502 1 HET FE A 503 1 HET ZN B1501 1 HET FE B1502 1 HET FE B1503 1 HET GOL B 601 6 HETNAM ZN ZINC ION HETNAM FE FE (III) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 FE 4(FE 3+) FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *413(H2 O) HELIX 1 1 THR A 8 GLY A 12 5 5 HELIX 2 2 HIS A 17 LYS A 28 1 12 HELIX 3 3 ASP A 46 ARG A 50 5 5 HELIX 4 4 ARG A 52 GLU A 54 5 3 HELIX 5 5 ALA A 55 ARG A 69 1 15 HELIX 6 6 THR A 87 ARG A 97 1 11 HELIX 7 7 HIS A 117 ARG A 127 5 11 HELIX 8 8 ASP A 128 SER A 146 1 19 HELIX 9 9 ASP A 156 LYS A 160 5 5 HELIX 10 10 PRO A 166 GLY A 185 1 20 HELIX 11 11 ALA A 193 ARG A 197 5 5 HELIX 12 12 ALA A 205 LEU A 215 1 11 HELIX 13 13 ARG A 227 VAL A 231 5 5 HELIX 14 14 ALA A 234 LEU A 245 1 12 HELIX 15 15 THR B 8 GLY B 12 5 5 HELIX 16 16 HIS B 17 LYS B 28 1 12 HELIX 17 17 ASP B 46 ARG B 50 5 5 HELIX 18 18 ARG B 52 GLU B 54 5 3 HELIX 19 19 ALA B 55 ALA B 70 1 16 HELIX 20 20 THR B 87 ARG B 96 1 10 HELIX 21 21 HIS B 117 ARG B 127 5 11 HELIX 22 22 ASP B 128 SER B 146 1 19 HELIX 23 23 ASP B 156 LYS B 160 5 5 HELIX 24 24 PRO B 166 GLY B 185 1 20 HELIX 25 25 ALA B 193 ARG B 196 5 4 HELIX 26 26 ALA B 205 LEU B 215 1 11 HELIX 27 27 ARG B 227 VAL B 231 5 5 HELIX 28 28 ALA B 234 LEU B 245 1 12 SHEET 1 A 7 VAL A 2 VAL A 6 0 SHEET 2 A 7 GLY A 32 HIS A 38 1 O VAL A 34 N ASP A 3 SHEET 3 A 7 TYR A 74 ASP A 82 1 O GLY A 78 N PHE A 35 SHEET 4 A 7 VAL A 103 SER A 106 1 O ILE A 104 N LEU A 79 SHEET 5 A 7 ALA A 151 ILE A 152 1 O ALA A 151 N GLY A 105 SHEET 6 A 7 PHE A 187 ASN A 191 1 O ASP A 189 N ILE A 152 SHEET 7 A 7 LEU A 219 GLY A 222 1 O VAL A 220 N VAL A 190 SHEET 1 B 2 TYR A 109 LEU A 110 0 SHEET 2 B 2 TRP A 113 PRO A 114 -1 O TRP A 113 N LEU A 110 SHEET 1 C 2 GLU A 249 VAL A 254 0 SHEET 2 C 2 SER A 257 PRO A 262 -1 O VAL A 259 N TYR A 252 SHEET 1 D 7 VAL B 2 VAL B 6 0 SHEET 2 D 7 GLY B 32 HIS B 38 1 O THR B 36 N VAL B 6 SHEET 3 D 7 TYR B 74 ASP B 82 1 O GLY B 76 N VAL B 33 SHEET 4 D 7 VAL B 103 SER B 106 1 O SER B 106 N ALA B 81 SHEET 5 D 7 ALA B 151 ILE B 152 1 O ALA B 151 N GLY B 105 SHEET 6 D 7 PHE B 187 ASN B 191 1 O ASP B 189 N ILE B 152 SHEET 7 D 7 LEU B 219 GLY B 222 1 O VAL B 220 N LEU B 188 SHEET 1 E 2 TYR B 109 LEU B 110 0 SHEET 2 E 2 TRP B 113 PRO B 114 -1 O TRP B 113 N LEU B 110 SHEET 1 F 2 GLU B 249 VAL B 254 0 SHEET 2 F 2 SER B 257 PRO B 262 -1 O TYR B 261 N ALA B 250 LINK NE2 HIS A 5 FE FE A 503 1555 1555 2.33 LINK NE2 HIS A 7 FE FE A 503 1555 1555 2.22 LINK NE2 HIS A 13 ZN ZN A 501 1555 1555 2.15 LINK NE2 HIS A 38 ZN ZN A 501 1555 1555 2.06 LINK OE2 GLU A 80 FE FE A 502 1555 1555 2.30 LINK OE1 GLU A 80 FE FE A 503 1555 1555 2.21 LINK NE2 HIS A 108 FE FE A 502 1555 1555 2.31 LINK NE2 HIS A 154 FE FE A 502 1555 1555 2.29 LINK OD1 ASP A 224 FE FE A 503 1555 1555 2.25 LINK NE2 HIS A 226 ZN ZN A 501 1555 1555 2.17 LINK FE FE A 502 O HOH A 630 1555 1555 2.09 LINK FE FE A 503 O HOH A 630 1555 1555 2.00 LINK NE2 HIS B 5 FE FE B1503 1555 1555 2.28 LINK NE2 HIS B 7 FE FE B1503 1555 1555 2.33 LINK NE2 HIS B 13 ZN ZN B1501 1555 1555 2.22 LINK NE2 HIS B 38 ZN ZN B1501 1555 1555 2.13 LINK OE2 GLU B 80 FE FE B1502 1555 1555 2.25 LINK OE1 GLU B 80 FE FE B1503 1555 1555 2.13 LINK NE2 HIS B 108 FE FE B1502 1555 1555 2.18 LINK NE2 HIS B 154 FE FE B1502 1555 1555 2.32 LINK OD1 ASP B 224 FE FE B1503 1555 1555 2.15 LINK NE2 HIS B 226 ZN ZN B1501 1555 1555 2.14 LINK FE FE B1502 O HOH B1648 1555 1555 2.19 LINK FE FE B1503 O HOH B1648 1555 1555 1.91 CISPEP 1 TYR A 203 PRO A 204 0 -0.80 CISPEP 2 TYR B 203 PRO B 204 0 -1.24 SITE 1 AC1 4 HIS A 13 HIS A 38 HIS A 226 HOH A 631 SITE 1 AC2 6 GLU A 80 HIS A 108 HIS A 154 FE A 503 SITE 2 AC2 6 HOH A 630 HOH A 631 SITE 1 AC3 6 HIS A 5 HIS A 7 GLU A 80 ASP A 224 SITE 2 AC3 6 FE A 502 HOH A 630 SITE 1 AC4 4 HIS B 13 HIS B 38 HIS B 226 HOH B1504 SITE 1 AC5 5 GLU B 80 HIS B 108 HIS B 154 FE B1503 SITE 2 AC5 5 HOH B1648 SITE 1 AC6 6 HIS B 5 HIS B 7 GLU B 80 ASP B 224 SITE 2 AC6 6 FE B1502 HOH B1648 SITE 1 AC7 6 HIS A 17 GLU A 19 ARG A 69 LEU B 60 SITE 2 AC7 6 LEU B 61 GLU B 64 CRYST1 84.961 96.786 74.716 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011770 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013384 0.00000