HEADER PROTEIN FIBRIL REGULATOR 31-JUL-07 2Z6E TITLE CRYSTAL STRUCTURE OF HUMAN DAAM1 FH2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISHEVELED-ASSOCIATED ACTIVATOR OF MORPHOGENESIS 1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: FH2 DOMAIN, UNP RESIDUES 594-1012; COMPND 5 SYNONYM: FORMIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: DAAM1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS COILED COIL, ALTERNATIVE SPLICING, CYTOPLASM, PROTEIN FIBRIL KEYWDS 2 REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR M.YAMASHITA,T.HIGASHI,Y.SATO,R.SHIRAKAWA,T.KITA,H.HORIUCHI,S.FUKAI, AUTHOR 2 O.NUREKI REVDAT 3 13-MAR-24 2Z6E 1 REMARK REVDAT 2 24-FEB-09 2Z6E 1 VERSN REVDAT 1 27-MAY-08 2Z6E 0 JRNL AUTH M.YAMASHITA,T.HIGASHI,S.SUETSUGU,Y.SATO,T.IKEDA,R.SHIRAKAWA, JRNL AUTH 2 T.KITA,T.TAKENAWA,H.HORIUCHI,S.FUKAI,O.NUREKI JRNL TITL CRYSTAL STRUCTURE OF HUMAN DAAM1 FORMIN HOMOLOGY 2 DOMAIN JRNL REF GENES CELLS V. 12 1255 2007 JRNL REFN ISSN 1356-9597 JRNL PMID 17986009 JRNL DOI 10.1111/J.1365-2443.2007.01132.X REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3368250.170 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.8 REMARK 3 NUMBER OF REFLECTIONS : 49208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2469 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6094 REMARK 3 BIN R VALUE (WORKING SET) : 0.4130 REMARK 3 BIN FREE R VALUE : 0.4510 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 323 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12628 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.35000 REMARK 3 B22 (A**2) : 26.63000 REMARK 3 B33 (A**2) : -16.28000 REMARK 3 B12 (A**2) : 16.41000 REMARK 3 B13 (A**2) : 5.52000 REMARK 3 B23 (A**2) : 16.30000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM SIGMAA (A) : 0.76 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.53 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.82 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.950 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 7.490 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.930 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 9.560 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.28 REMARK 3 BSOL : 23.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z6E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000027578. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-05; 25-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL41XU; BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000; 0.9793, 0.9795 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : DENZO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49227 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03700 REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.18400 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 594 REMARK 465 GLY A 595 REMARK 465 LEU A 596 REMARK 465 ALA A 597 REMARK 465 LEU A 598 REMARK 465 LYS A 599 REMARK 465 LYS A 600 REMARK 465 GLN A 656 REMARK 465 ASP A 657 REMARK 465 PHE A 658 REMARK 465 PHE A 659 REMARK 465 VAL A 660 REMARK 465 ASN A 661 REMARK 465 SER A 662 REMARK 465 ASN A 663 REMARK 465 SER A 664 REMARK 465 LYS A 665 REMARK 465 GLN A 666 REMARK 465 LYS A 667 REMARK 465 GLU A 668 REMARK 465 ALA A 669 REMARK 465 ASP A 670 REMARK 465 ALA A 671 REMARK 465 ILE A 672 REMARK 465 ASP A 673 REMARK 465 ASP A 674 REMARK 465 THR A 675 REMARK 465 LEU A 676 REMARK 465 SER A 677 REMARK 465 SER A 678 REMARK 465 LYS A 679 REMARK 465 VAL B 660 REMARK 465 ASN B 661 REMARK 465 SER B 662 REMARK 465 ASN B 663 REMARK 465 SER B 664 REMARK 465 LYS B 665 REMARK 465 GLN B 666 REMARK 465 LYS B 667 REMARK 465 GLU B 668 REMARK 465 ALA B 669 REMARK 465 ASP B 670 REMARK 465 ALA B 671 REMARK 465 ILE B 672 REMARK 465 ASP B 673 REMARK 465 ASP B 674 REMARK 465 THR B 675 REMARK 465 LEU B 676 REMARK 465 SER B 677 REMARK 465 SER B 678 REMARK 465 LYS B 679 REMARK 465 LEU B 680 REMARK 465 LYS B 681 REMARK 465 GLU B 1012 REMARK 465 MET C 594 REMARK 465 GLY C 595 REMARK 465 LEU C 596 REMARK 465 ALA C 597 REMARK 465 LEU C 598 REMARK 465 LYS C 599 REMARK 465 LYS C 600 REMARK 465 PHE C 658 REMARK 465 PHE C 659 REMARK 465 VAL C 660 REMARK 465 ASN C 661 REMARK 465 SER C 662 REMARK 465 ASN C 663 REMARK 465 SER C 664 REMARK 465 LYS C 665 REMARK 465 GLN C 666 REMARK 465 LYS C 667 REMARK 465 GLU C 668 REMARK 465 ALA C 669 REMARK 465 ASP C 670 REMARK 465 ALA C 671 REMARK 465 ILE C 672 REMARK 465 ASP C 673 REMARK 465 ASP C 674 REMARK 465 THR C 675 REMARK 465 LEU C 676 REMARK 465 SER C 677 REMARK 465 SER C 678 REMARK 465 LYS C 679 REMARK 465 LEU C 680 REMARK 465 ARG C 1003 REMARK 465 ALA C 1004 REMARK 465 ARG C 1005 REMARK 465 MET C 1006 REMARK 465 GLU C 1007 REMARK 465 ALA C 1008 REMARK 465 GLN C 1009 REMARK 465 LEU C 1010 REMARK 465 LYS C 1011 REMARK 465 GLU C 1012 REMARK 465 MET D 594 REMARK 465 GLY D 595 REMARK 465 LEU D 596 REMARK 465 ALA D 597 REMARK 465 LEU D 598 REMARK 465 LYS D 599 REMARK 465 LYS D 600 REMARK 465 PHE D 658 REMARK 465 PHE D 659 REMARK 465 VAL D 660 REMARK 465 ASN D 661 REMARK 465 SER D 662 REMARK 465 ASN D 663 REMARK 465 SER D 664 REMARK 465 LYS D 665 REMARK 465 GLN D 666 REMARK 465 LYS D 667 REMARK 465 GLU D 668 REMARK 465 ALA D 669 REMARK 465 ASP D 670 REMARK 465 ALA D 671 REMARK 465 ILE D 672 REMARK 465 ASP D 673 REMARK 465 ASP D 674 REMARK 465 THR D 675 REMARK 465 LEU D 676 REMARK 465 SER D 677 REMARK 465 SER D 678 REMARK 465 LYS D 679 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 602 105.67 -48.22 REMARK 500 ASN A 614 44.13 80.46 REMARK 500 LYS A 622 15.37 -68.54 REMARK 500 LYS A 681 173.55 179.71 REMARK 500 GLU A 721 56.97 38.47 REMARK 500 PRO A 736 108.94 -57.70 REMARK 500 GLU A 746 -6.23 -55.86 REMARK 500 ARG A 753 74.07 27.30 REMARK 500 ALA A 755 140.66 -20.52 REMARK 500 LEU A 774 -70.91 -60.16 REMARK 500 LYS A 782 63.57 -112.02 REMARK 500 MET A 824 -105.24 -57.47 REMARK 500 ASN A 825 91.57 -60.20 REMARK 500 LYS A 867 -13.63 -153.29 REMARK 500 TYR A 868 71.50 -150.53 REMARK 500 GLN A 883 35.74 -88.16 REMARK 500 ALA A 884 -22.61 -154.62 REMARK 500 THR A 890 -77.74 -59.05 REMARK 500 SER A 915 34.04 -93.17 REMARK 500 PHE A 924 -72.27 -59.67 REMARK 500 ALA A 964 -111.87 -11.93 REMARK 500 GLN A 981 -74.83 -66.81 REMARK 500 ALA A 982 -37.36 -32.31 REMARK 500 MET A1006 3.74 -69.88 REMARK 500 LYS B 599 54.33 -91.78 REMARK 500 LYS B 601 -85.55 -158.48 REMARK 500 SER B 602 97.64 -62.36 REMARK 500 ASN B 614 44.14 88.53 REMARK 500 TRP B 628 -12.85 -48.63 REMARK 500 GLN B 655 71.30 -32.99 REMARK 500 GLN B 656 96.71 -48.87 REMARK 500 PHE B 658 162.08 -29.81 REMARK 500 ARG B 691 -74.33 -58.41 REMARK 500 GLU B 746 11.57 -56.97 REMARK 500 ARG B 753 80.11 35.05 REMARK 500 ALA B 755 136.33 -32.68 REMARK 500 GLN B 771 -70.15 -45.66 REMARK 500 GLN B 775 -39.09 -39.86 REMARK 500 LYS B 782 71.20 -106.87 REMARK 500 PHE B 783 -40.53 -132.88 REMARK 500 MET B 824 -103.03 -58.32 REMARK 500 ASN B 825 79.04 -62.60 REMARK 500 LYS B 826 -169.15 -72.81 REMARK 500 LYS B 867 3.71 -154.73 REMARK 500 TYR B 868 58.80 -159.71 REMARK 500 GLN B 883 49.91 -80.78 REMARK 500 ALA B 884 -18.78 -160.89 REMARK 500 THR B 890 -73.67 -53.55 REMARK 500 PRO B 918 171.25 -51.88 REMARK 500 LYS B 923 34.89 -87.35 REMARK 500 REMARK 500 THIS ENTRY HAS 99 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 778 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UX5 RELATED DB: PDB REMARK 900 YEAST BNI1P FH2 REMARK 900 RELATED ID: 1Y64 RELATED DB: PDB REMARK 900 YEAST BNI1P FH2-TMRACTIN COMPLEX REMARK 900 RELATED ID: 1V9D RELATED DB: PDB REMARK 900 MOUSE MDIA1 FH2 CORE DBREF 2Z6E A 594 1012 UNP Q9Y4D1 DAAM1_HUMAN 594 1012 DBREF 2Z6E B 594 1012 UNP Q9Y4D1 DAAM1_HUMAN 594 1012 DBREF 2Z6E C 594 1012 UNP Q9Y4D1 DAAM1_HUMAN 594 1012 DBREF 2Z6E D 594 1012 UNP Q9Y4D1 DAAM1_HUMAN 594 1012 SEQRES 1 A 419 MET GLY LEU ALA LEU LYS LYS LYS SER ILE PRO GLN PRO SEQRES 2 A 419 THR ASN ALA LEU LYS SER PHE ASN TRP SER LYS LEU PRO SEQRES 3 A 419 GLU ASN LYS LEU GLU GLY THR VAL TRP THR GLU ILE ASP SEQRES 4 A 419 ASP THR LYS VAL PHE LYS ILE LEU ASP LEU GLU ASP LEU SEQRES 5 A 419 GLU ARG THR PHE SER ALA TYR GLN ARG GLN GLN ASP PHE SEQRES 6 A 419 PHE VAL ASN SER ASN SER LYS GLN LYS GLU ALA ASP ALA SEQRES 7 A 419 ILE ASP ASP THR LEU SER SER LYS LEU LYS VAL LYS GLU SEQRES 8 A 419 LEU SER VAL ILE ASP GLY ARG ARG ALA GLN ASN CYS ASN SEQRES 9 A 419 ILE LEU LEU SER ARG LEU LYS LEU SER ASN ASP GLU ILE SEQRES 10 A 419 LYS ARG ALA ILE LEU THR MET ASP GLU GLN GLU ASP LEU SEQRES 11 A 419 PRO LYS ASP MET LEU GLU GLN LEU LEU LYS PHE VAL PRO SEQRES 12 A 419 GLU LYS SER ASP ILE ASP LEU LEU GLU GLU HIS LYS HIS SEQRES 13 A 419 GLU LEU ASP ARG MET ALA LYS ALA ASP ARG PHE LEU PHE SEQRES 14 A 419 GLU MET SER ARG ILE ASN HIS TYR GLN GLN ARG LEU GLN SEQRES 15 A 419 SER LEU TYR PHE LYS LYS LYS PHE ALA GLU ARG VAL ALA SEQRES 16 A 419 GLU VAL LYS PRO LYS VAL GLU ALA ILE ARG SER GLY SER SEQRES 17 A 419 GLU GLU VAL PHE ARG SER GLY ALA LEU LYS GLN LEU LEU SEQRES 18 A 419 GLU VAL VAL LEU ALA PHE GLY ASN TYR MET ASN LYS GLY SEQRES 19 A 419 GLN ARG GLY ASN ALA TYR GLY PHE LYS ILE SER SER LEU SEQRES 20 A 419 ASN LYS ILE ALA ASP THR LYS SER SER ILE ASP LYS ASN SEQRES 21 A 419 ILE THR LEU LEU HIS TYR LEU ILE THR ILE VAL GLU ASN SEQRES 22 A 419 LYS TYR PRO SER VAL LEU ASN LEU ASN GLU GLU LEU ARG SEQRES 23 A 419 ASP ILE PRO GLN ALA ALA LYS VAL ASN MET THR GLU LEU SEQRES 24 A 419 ASP LYS GLU ILE SER THR LEU ARG SER GLY LEU LYS ALA SEQRES 25 A 419 VAL GLU THR GLU LEU GLU TYR GLN LYS SER GLN PRO PRO SEQRES 26 A 419 GLN PRO GLY ASP LYS PHE VAL SER VAL VAL SER GLN PHE SEQRES 27 A 419 ILE THR VAL ALA SER PHE SER PHE SER ASP VAL GLU ASP SEQRES 28 A 419 LEU LEU ALA GLU ALA LYS ASP LEU PHE THR LYS ALA VAL SEQRES 29 A 419 LYS HIS PHE GLY GLU GLU ALA GLY LYS ILE GLN PRO ASP SEQRES 30 A 419 GLU PHE PHE GLY ILE PHE ASP GLN PHE LEU GLN ALA VAL SEQRES 31 A 419 SER GLU ALA LYS GLN GLU ASN GLU ASN MET ARG LYS LYS SEQRES 32 A 419 LYS GLU GLU GLU GLU ARG ARG ALA ARG MET GLU ALA GLN SEQRES 33 A 419 LEU LYS GLU SEQRES 1 B 419 MET GLY LEU ALA LEU LYS LYS LYS SER ILE PRO GLN PRO SEQRES 2 B 419 THR ASN ALA LEU LYS SER PHE ASN TRP SER LYS LEU PRO SEQRES 3 B 419 GLU ASN LYS LEU GLU GLY THR VAL TRP THR GLU ILE ASP SEQRES 4 B 419 ASP THR LYS VAL PHE LYS ILE LEU ASP LEU GLU ASP LEU SEQRES 5 B 419 GLU ARG THR PHE SER ALA TYR GLN ARG GLN GLN ASP PHE SEQRES 6 B 419 PHE VAL ASN SER ASN SER LYS GLN LYS GLU ALA ASP ALA SEQRES 7 B 419 ILE ASP ASP THR LEU SER SER LYS LEU LYS VAL LYS GLU SEQRES 8 B 419 LEU SER VAL ILE ASP GLY ARG ARG ALA GLN ASN CYS ASN SEQRES 9 B 419 ILE LEU LEU SER ARG LEU LYS LEU SER ASN ASP GLU ILE SEQRES 10 B 419 LYS ARG ALA ILE LEU THR MET ASP GLU GLN GLU ASP LEU SEQRES 11 B 419 PRO LYS ASP MET LEU GLU GLN LEU LEU LYS PHE VAL PRO SEQRES 12 B 419 GLU LYS SER ASP ILE ASP LEU LEU GLU GLU HIS LYS HIS SEQRES 13 B 419 GLU LEU ASP ARG MET ALA LYS ALA ASP ARG PHE LEU PHE SEQRES 14 B 419 GLU MET SER ARG ILE ASN HIS TYR GLN GLN ARG LEU GLN SEQRES 15 B 419 SER LEU TYR PHE LYS LYS LYS PHE ALA GLU ARG VAL ALA SEQRES 16 B 419 GLU VAL LYS PRO LYS VAL GLU ALA ILE ARG SER GLY SER SEQRES 17 B 419 GLU GLU VAL PHE ARG SER GLY ALA LEU LYS GLN LEU LEU SEQRES 18 B 419 GLU VAL VAL LEU ALA PHE GLY ASN TYR MET ASN LYS GLY SEQRES 19 B 419 GLN ARG GLY ASN ALA TYR GLY PHE LYS ILE SER SER LEU SEQRES 20 B 419 ASN LYS ILE ALA ASP THR LYS SER SER ILE ASP LYS ASN SEQRES 21 B 419 ILE THR LEU LEU HIS TYR LEU ILE THR ILE VAL GLU ASN SEQRES 22 B 419 LYS TYR PRO SER VAL LEU ASN LEU ASN GLU GLU LEU ARG SEQRES 23 B 419 ASP ILE PRO GLN ALA ALA LYS VAL ASN MET THR GLU LEU SEQRES 24 B 419 ASP LYS GLU ILE SER THR LEU ARG SER GLY LEU LYS ALA SEQRES 25 B 419 VAL GLU THR GLU LEU GLU TYR GLN LYS SER GLN PRO PRO SEQRES 26 B 419 GLN PRO GLY ASP LYS PHE VAL SER VAL VAL SER GLN PHE SEQRES 27 B 419 ILE THR VAL ALA SER PHE SER PHE SER ASP VAL GLU ASP SEQRES 28 B 419 LEU LEU ALA GLU ALA LYS ASP LEU PHE THR LYS ALA VAL SEQRES 29 B 419 LYS HIS PHE GLY GLU GLU ALA GLY LYS ILE GLN PRO ASP SEQRES 30 B 419 GLU PHE PHE GLY ILE PHE ASP GLN PHE LEU GLN ALA VAL SEQRES 31 B 419 SER GLU ALA LYS GLN GLU ASN GLU ASN MET ARG LYS LYS SEQRES 32 B 419 LYS GLU GLU GLU GLU ARG ARG ALA ARG MET GLU ALA GLN SEQRES 33 B 419 LEU LYS GLU SEQRES 1 C 419 MET GLY LEU ALA LEU LYS LYS LYS SER ILE PRO GLN PRO SEQRES 2 C 419 THR ASN ALA LEU LYS SER PHE ASN TRP SER LYS LEU PRO SEQRES 3 C 419 GLU ASN LYS LEU GLU GLY THR VAL TRP THR GLU ILE ASP SEQRES 4 C 419 ASP THR LYS VAL PHE LYS ILE LEU ASP LEU GLU ASP LEU SEQRES 5 C 419 GLU ARG THR PHE SER ALA TYR GLN ARG GLN GLN ASP PHE SEQRES 6 C 419 PHE VAL ASN SER ASN SER LYS GLN LYS GLU ALA ASP ALA SEQRES 7 C 419 ILE ASP ASP THR LEU SER SER LYS LEU LYS VAL LYS GLU SEQRES 8 C 419 LEU SER VAL ILE ASP GLY ARG ARG ALA GLN ASN CYS ASN SEQRES 9 C 419 ILE LEU LEU SER ARG LEU LYS LEU SER ASN ASP GLU ILE SEQRES 10 C 419 LYS ARG ALA ILE LEU THR MET ASP GLU GLN GLU ASP LEU SEQRES 11 C 419 PRO LYS ASP MET LEU GLU GLN LEU LEU LYS PHE VAL PRO SEQRES 12 C 419 GLU LYS SER ASP ILE ASP LEU LEU GLU GLU HIS LYS HIS SEQRES 13 C 419 GLU LEU ASP ARG MET ALA LYS ALA ASP ARG PHE LEU PHE SEQRES 14 C 419 GLU MET SER ARG ILE ASN HIS TYR GLN GLN ARG LEU GLN SEQRES 15 C 419 SER LEU TYR PHE LYS LYS LYS PHE ALA GLU ARG VAL ALA SEQRES 16 C 419 GLU VAL LYS PRO LYS VAL GLU ALA ILE ARG SER GLY SER SEQRES 17 C 419 GLU GLU VAL PHE ARG SER GLY ALA LEU LYS GLN LEU LEU SEQRES 18 C 419 GLU VAL VAL LEU ALA PHE GLY ASN TYR MET ASN LYS GLY SEQRES 19 C 419 GLN ARG GLY ASN ALA TYR GLY PHE LYS ILE SER SER LEU SEQRES 20 C 419 ASN LYS ILE ALA ASP THR LYS SER SER ILE ASP LYS ASN SEQRES 21 C 419 ILE THR LEU LEU HIS TYR LEU ILE THR ILE VAL GLU ASN SEQRES 22 C 419 LYS TYR PRO SER VAL LEU ASN LEU ASN GLU GLU LEU ARG SEQRES 23 C 419 ASP ILE PRO GLN ALA ALA LYS VAL ASN MET THR GLU LEU SEQRES 24 C 419 ASP LYS GLU ILE SER THR LEU ARG SER GLY LEU LYS ALA SEQRES 25 C 419 VAL GLU THR GLU LEU GLU TYR GLN LYS SER GLN PRO PRO SEQRES 26 C 419 GLN PRO GLY ASP LYS PHE VAL SER VAL VAL SER GLN PHE SEQRES 27 C 419 ILE THR VAL ALA SER PHE SER PHE SER ASP VAL GLU ASP SEQRES 28 C 419 LEU LEU ALA GLU ALA LYS ASP LEU PHE THR LYS ALA VAL SEQRES 29 C 419 LYS HIS PHE GLY GLU GLU ALA GLY LYS ILE GLN PRO ASP SEQRES 30 C 419 GLU PHE PHE GLY ILE PHE ASP GLN PHE LEU GLN ALA VAL SEQRES 31 C 419 SER GLU ALA LYS GLN GLU ASN GLU ASN MET ARG LYS LYS SEQRES 32 C 419 LYS GLU GLU GLU GLU ARG ARG ALA ARG MET GLU ALA GLN SEQRES 33 C 419 LEU LYS GLU SEQRES 1 D 419 MET GLY LEU ALA LEU LYS LYS LYS SER ILE PRO GLN PRO SEQRES 2 D 419 THR ASN ALA LEU LYS SER PHE ASN TRP SER LYS LEU PRO SEQRES 3 D 419 GLU ASN LYS LEU GLU GLY THR VAL TRP THR GLU ILE ASP SEQRES 4 D 419 ASP THR LYS VAL PHE LYS ILE LEU ASP LEU GLU ASP LEU SEQRES 5 D 419 GLU ARG THR PHE SER ALA TYR GLN ARG GLN GLN ASP PHE SEQRES 6 D 419 PHE VAL ASN SER ASN SER LYS GLN LYS GLU ALA ASP ALA SEQRES 7 D 419 ILE ASP ASP THR LEU SER SER LYS LEU LYS VAL LYS GLU SEQRES 8 D 419 LEU SER VAL ILE ASP GLY ARG ARG ALA GLN ASN CYS ASN SEQRES 9 D 419 ILE LEU LEU SER ARG LEU LYS LEU SER ASN ASP GLU ILE SEQRES 10 D 419 LYS ARG ALA ILE LEU THR MET ASP GLU GLN GLU ASP LEU SEQRES 11 D 419 PRO LYS ASP MET LEU GLU GLN LEU LEU LYS PHE VAL PRO SEQRES 12 D 419 GLU LYS SER ASP ILE ASP LEU LEU GLU GLU HIS LYS HIS SEQRES 13 D 419 GLU LEU ASP ARG MET ALA LYS ALA ASP ARG PHE LEU PHE SEQRES 14 D 419 GLU MET SER ARG ILE ASN HIS TYR GLN GLN ARG LEU GLN SEQRES 15 D 419 SER LEU TYR PHE LYS LYS LYS PHE ALA GLU ARG VAL ALA SEQRES 16 D 419 GLU VAL LYS PRO LYS VAL GLU ALA ILE ARG SER GLY SER SEQRES 17 D 419 GLU GLU VAL PHE ARG SER GLY ALA LEU LYS GLN LEU LEU SEQRES 18 D 419 GLU VAL VAL LEU ALA PHE GLY ASN TYR MET ASN LYS GLY SEQRES 19 D 419 GLN ARG GLY ASN ALA TYR GLY PHE LYS ILE SER SER LEU SEQRES 20 D 419 ASN LYS ILE ALA ASP THR LYS SER SER ILE ASP LYS ASN SEQRES 21 D 419 ILE THR LEU LEU HIS TYR LEU ILE THR ILE VAL GLU ASN SEQRES 22 D 419 LYS TYR PRO SER VAL LEU ASN LEU ASN GLU GLU LEU ARG SEQRES 23 D 419 ASP ILE PRO GLN ALA ALA LYS VAL ASN MET THR GLU LEU SEQRES 24 D 419 ASP LYS GLU ILE SER THR LEU ARG SER GLY LEU LYS ALA SEQRES 25 D 419 VAL GLU THR GLU LEU GLU TYR GLN LYS SER GLN PRO PRO SEQRES 26 D 419 GLN PRO GLY ASP LYS PHE VAL SER VAL VAL SER GLN PHE SEQRES 27 D 419 ILE THR VAL ALA SER PHE SER PHE SER ASP VAL GLU ASP SEQRES 28 D 419 LEU LEU ALA GLU ALA LYS ASP LEU PHE THR LYS ALA VAL SEQRES 29 D 419 LYS HIS PHE GLY GLU GLU ALA GLY LYS ILE GLN PRO ASP SEQRES 30 D 419 GLU PHE PHE GLY ILE PHE ASP GLN PHE LEU GLN ALA VAL SEQRES 31 D 419 SER GLU ALA LYS GLN GLU ASN GLU ASN MET ARG LYS LYS SEQRES 32 D 419 LYS GLU GLU GLU GLU ARG ARG ALA ARG MET GLU ALA GLN SEQRES 33 D 419 LEU LYS GLU FORMUL 5 HOH *122(H2 O) HELIX 1 1 GLU A 620 GLU A 624 5 5 HELIX 2 2 THR A 626 ASP A 632 5 7 HELIX 3 3 ASP A 633 LYS A 638 1 6 HELIX 4 4 ASP A 641 PHE A 649 1 9 HELIX 5 5 ASP A 689 LYS A 704 1 16 HELIX 6 6 SER A 706 THR A 716 1 11 HELIX 7 7 PRO A 724 LEU A 732 1 9 HELIX 8 8 GLU A 737 GLU A 746 1 10 HELIX 9 9 HIS A 747 LEU A 751 5 5 HELIX 10 10 ALA A 755 ARG A 766 1 12 HELIX 11 11 HIS A 769 LYS A 782 1 14 HELIX 12 12 PHE A 783 GLU A 789 1 7 HELIX 13 13 VAL A 790 SER A 807 1 18 HELIX 14 14 SER A 807 MET A 824 1 18 HELIX 15 15 LYS A 836 THR A 846 5 11 HELIX 16 16 THR A 855 ASN A 866 1 12 HELIX 17 17 TYR A 868 LEU A 872 5 5 HELIX 18 18 ASN A 873 LEU A 878 1 6 HELIX 19 19 ASN A 888 SER A 915 1 28 HELIX 20 20 LYS A 923 PHE A 960 1 38 HELIX 21 21 GLN A 968 GLU A 1001 1 34 HELIX 22 22 ALA A 1004 GLN A 1009 1 6 HELIX 23 23 GLU B 620 GLU B 624 5 5 HELIX 24 24 THR B 626 ILE B 631 5 6 HELIX 25 25 ASP B 633 LYS B 638 1 6 HELIX 26 26 ASP B 641 PHE B 649 1 9 HELIX 27 27 ASP B 689 LYS B 704 1 16 HELIX 28 28 SER B 706 THR B 716 1 11 HELIX 29 29 PRO B 724 LEU B 732 1 9 HELIX 30 30 GLU B 737 GLU B 746 1 10 HELIX 31 31 HIS B 747 LEU B 751 5 5 HELIX 32 32 ALA B 755 ARG B 766 1 12 HELIX 33 33 HIS B 769 LYS B 782 1 14 HELIX 34 34 PHE B 783 SER B 807 1 25 HELIX 35 35 SER B 807 MET B 824 1 18 HELIX 36 36 LYS B 826 GLY B 830 5 5 HELIX 37 37 LYS B 836 ILE B 843 5 8 HELIX 38 38 THR B 855 ASN B 866 1 12 HELIX 39 39 TYR B 868 ARG B 879 5 12 HELIX 40 40 ILE B 881 ALA B 885 5 5 HELIX 41 41 ASN B 888 SER B 915 1 28 HELIX 42 42 LYS B 923 PHE B 960 1 38 HELIX 43 43 GLN B 968 LYS B 1011 1 44 HELIX 44 44 GLU C 620 GLU C 624 5 5 HELIX 45 45 THR C 626 ILE C 631 5 6 HELIX 46 46 ASP C 632 LYS C 638 1 7 HELIX 47 47 ASP C 641 PHE C 649 1 9 HELIX 48 48 ASP C 689 LYS C 704 1 16 HELIX 49 49 SER C 706 THR C 716 1 11 HELIX 50 50 PRO C 724 PHE C 734 1 11 HELIX 51 51 GLU C 737 GLU C 746 1 10 HELIX 52 52 HIS C 747 LEU C 751 5 5 HELIX 53 53 ALA C 755 ARG C 766 1 12 HELIX 54 54 HIS C 769 LYS C 782 1 14 HELIX 55 55 PHE C 783 SER C 807 1 25 HELIX 56 56 SER C 807 ASN C 825 1 19 HELIX 57 57 LYS C 836 ILE C 843 5 8 HELIX 58 58 THR C 855 ASN C 866 1 12 HELIX 59 59 TYR C 868 LEU C 872 5 5 HELIX 60 60 ASN C 873 LEU C 878 1 6 HELIX 61 61 ILE C 881 ALA C 885 5 5 HELIX 62 62 ASN C 888 SER C 915 1 28 HELIX 63 63 LYS C 923 PHE C 960 1 38 HELIX 64 64 GLN C 968 ARG C 1002 1 35 HELIX 65 65 GLU D 620 GLU D 624 5 5 HELIX 66 66 THR D 626 ILE D 631 5 6 HELIX 67 67 ASP D 632 LYS D 638 1 7 HELIX 68 68 ASP D 641 PHE D 649 1 9 HELIX 69 69 ASP D 689 LYS D 704 1 16 HELIX 70 70 SER D 706 THR D 716 1 11 HELIX 71 71 PRO D 724 LEU D 732 1 9 HELIX 72 72 GLU D 737 GLU D 746 1 10 HELIX 73 73 HIS D 747 LEU D 751 5 5 HELIX 74 74 ALA D 755 ARG D 766 1 12 HELIX 75 75 HIS D 769 LYS D 782 1 14 HELIX 76 76 PHE D 783 SER D 807 1 25 HELIX 77 77 SER D 807 MET D 824 1 18 HELIX 78 78 LYS D 826 GLY D 830 5 5 HELIX 79 79 LYS D 836 ILE D 843 5 8 HELIX 80 80 THR D 855 ASN D 866 1 12 HELIX 81 81 TYR D 868 LEU D 872 5 5 HELIX 82 82 ASN D 873 LEU D 878 1 6 HELIX 83 83 ILE D 881 ALA D 885 5 5 HELIX 84 84 ASN D 888 SER D 915 1 28 HELIX 85 85 LYS D 923 PHE D 960 1 38 HELIX 86 86 GLN D 968 GLU D 1007 1 40 SHEET 1 A 2 TYR A 652 GLN A 653 0 SHEET 2 A 2 GLU A 684 LEU A 685 -1 O GLU A 684 N GLN A 653 SHEET 1 B 2 TYR B 652 ARG B 654 0 SHEET 2 B 2 LYS B 683 LEU B 685 -1 O GLU B 684 N GLN B 653 SHEET 1 C 2 TYR C 652 GLN C 653 0 SHEET 2 C 2 GLU C 684 LEU C 685 -1 O GLU C 684 N GLN C 653 SHEET 1 D 2 TYR D 652 GLN D 653 0 SHEET 2 D 2 GLU D 684 LEU D 685 -1 O GLU D 684 N GLN D 653 CRYST1 69.213 91.895 97.681 98.12 90.32 104.79 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014448 0.003815 0.000651 0.00000 SCALE2 0.000000 0.011255 0.001679 0.00000 SCALE3 0.000000 0.000000 0.010351 0.00000