HEADER CELL ADHESION 01-AUG-07 2Z6G TITLE CRYSTAL STRUCTURE OF A FULL-LENGTH ZEBRAFISH BETA-CATENIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CATENIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) STAR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS FULL-LENGTH, BETA-CATENIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Y.XING,K.TAKEMARU,J.LIU,J.ZHENG,R.MOON,W.XU REVDAT 4 01-NOV-23 2Z6G 1 REMARK REVDAT 3 24-FEB-09 2Z6G 1 VERSN REVDAT 2 25-MAR-08 2Z6G 1 JRNL AUTHOR REVDAT 1 12-FEB-08 2Z6G 0 JRNL AUTH Y.XING,K.TAKEMARU,J.LIU,J.D.BERNDT,J.J.ZHENG,R.T.MOON,W.XU JRNL TITL CRYSTAL STRUCTURE OF A FULL-LENGTH BETA-CATENIN JRNL REF STRUCTURE V. 16 478 2008 JRNL REFN ISSN 0969-2126 JRNL PMID 18334222 JRNL DOI 10.1016/J.STR.2007.12.021 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 483797.840 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 78.2 REMARK 3 NUMBER OF REFLECTIONS : 11140 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.281 REMARK 3 FREE R VALUE : 0.319 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 562 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.61 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 68.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1509 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 69 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.047 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4186 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.89000 REMARK 3 B22 (A**2) : 14.56000 REMARK 3 B33 (A**2) : -6.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.54 REMARK 3 ESD FROM SIGMAA (A) : 0.35 REMARK 3 LOW RESOLUTION CUTOFF (A) : 50.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.65 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.31 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.003 REMARK 3 BOND ANGLES (DEGREES) : 0.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 16.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.570 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.210 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.180 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.490 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.520 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.28 REMARK 3 BSOL : 15.38 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z6G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000027580. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 170.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 5 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ANL-ECT REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11140 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1I7X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 7.5, 10% ETHANOL, 25MM REMARK 280 SPERMINE TETRAHYDROCHLORIDE, PH 7.50, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.81150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.54550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.40950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.54550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.81150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.40950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 LEU A 7 REMARK 465 MET A 8 REMARK 465 GLU A 9 REMARK 465 LEU A 10 REMARK 465 GLU A 11 REMARK 465 MET A 12 REMARK 465 ALA A 13 REMARK 465 MET A 14 REMARK 465 ASP A 15 REMARK 465 PRO A 16 REMARK 465 ASP A 17 REMARK 465 ARG A 18 REMARK 465 LYS A 19 REMARK 465 ALA A 20 REMARK 465 ALA A 21 REMARK 465 VAL A 22 REMARK 465 SER A 23 REMARK 465 HIS A 24 REMARK 465 TRP A 25 REMARK 465 GLN A 26 REMARK 465 GLN A 27 REMARK 465 GLN A 28 REMARK 465 SER A 29 REMARK 465 TYR A 30 REMARK 465 LEU A 31 REMARK 465 ASP A 32 REMARK 465 SER A 33 REMARK 465 GLY A 34 REMARK 465 ILE A 35 REMARK 465 HIS A 36 REMARK 465 SER A 37 REMARK 465 GLY A 38 REMARK 465 ALA A 39 REMARK 465 THR A 40 REMARK 465 THR A 41 REMARK 465 THR A 42 REMARK 465 ALA A 43 REMARK 465 PRO A 44 REMARK 465 SER A 45 REMARK 465 LEU A 46 REMARK 465 SER A 47 REMARK 465 GLY A 48 REMARK 465 LYS A 49 REMARK 465 GLY A 50 REMARK 465 ASN A 51 REMARK 465 PRO A 52 REMARK 465 GLU A 53 REMARK 465 ASP A 54 REMARK 465 ASP A 55 REMARK 465 ASP A 56 REMARK 465 VAL A 57 REMARK 465 ASP A 58 REMARK 465 ASN A 59 REMARK 465 GLN A 60 REMARK 465 VAL A 61 REMARK 465 LEU A 62 REMARK 465 TYR A 63 REMARK 465 GLU A 64 REMARK 465 TRP A 65 REMARK 465 GLU A 66 REMARK 465 GLN A 67 REMARK 465 GLY A 68 REMARK 465 PHE A 69 REMARK 465 ASN A 70 REMARK 465 GLN A 71 REMARK 465 SER A 72 REMARK 465 PHE A 73 REMARK 465 ASN A 74 REMARK 465 GLN A 75 REMARK 465 GLU A 76 REMARK 465 GLN A 77 REMARK 465 VAL A 78 REMARK 465 ALA A 79 REMARK 465 ASP A 80 REMARK 465 ILE A 81 REMARK 465 ASP A 82 REMARK 465 GLY A 83 REMARK 465 GLN A 84 REMARK 465 TYR A 85 REMARK 465 ALA A 86 REMARK 465 MET A 87 REMARK 465 THR A 88 REMARK 465 ARG A 89 REMARK 465 ALA A 90 REMARK 465 GLN A 91 REMARK 465 ARG A 92 REMARK 465 VAL A 93 REMARK 465 ARG A 94 REMARK 465 ALA A 95 REMARK 465 ALA A 96 REMARK 465 MET A 97 REMARK 465 PHE A 98 REMARK 465 PRO A 99 REMARK 465 GLU A 100 REMARK 465 THR A 101 REMARK 465 LEU A 102 REMARK 465 ASP A 103 REMARK 465 GLU A 104 REMARK 465 GLY A 105 REMARK 465 MET A 106 REMARK 465 GLN A 107 REMARK 465 ILE A 108 REMARK 465 PRO A 109 REMARK 465 SER A 110 REMARK 465 THR A 111 REMARK 465 GLN A 112 REMARK 465 PHE A 113 REMARK 465 ASP A 114 REMARK 465 SER A 115 REMARK 465 ALA A 116 REMARK 465 HIS A 117 REMARK 465 PRO A 118 REMARK 465 THR A 119 REMARK 465 ASN A 120 REMARK 465 VAL A 121 REMARK 465 GLN A 122 REMARK 465 ARG A 123 REMARK 465 LEU A 124 REMARK 465 ALA A 125 REMARK 465 MET A 552 REMARK 465 GLY A 553 REMARK 465 GLY A 554 REMARK 465 THR A 555 REMARK 465 GLN A 556 REMARK 465 GLN A 557 REMARK 465 PHE A 682 REMARK 465 ARG A 683 REMARK 465 THR A 684 REMARK 465 GLU A 685 REMARK 465 PRO A 686 REMARK 465 MET A 687 REMARK 465 THR A 688 REMARK 465 TRP A 689 REMARK 465 ASN A 690 REMARK 465 GLU A 691 REMARK 465 THR A 692 REMARK 465 GLY A 693 REMARK 465 ASP A 694 REMARK 465 LEU A 695 REMARK 465 GLY A 696 REMARK 465 LEU A 697 REMARK 465 ASP A 698 REMARK 465 ILE A 699 REMARK 465 GLY A 700 REMARK 465 ALA A 701 REMARK 465 GLN A 702 REMARK 465 GLY A 703 REMARK 465 GLU A 704 REMARK 465 PRO A 705 REMARK 465 LEU A 706 REMARK 465 GLY A 707 REMARK 465 TYR A 708 REMARK 465 ARG A 709 REMARK 465 GLN A 710 REMARK 465 ASP A 711 REMARK 465 ASP A 712 REMARK 465 PRO A 713 REMARK 465 SER A 714 REMARK 465 TYR A 715 REMARK 465 ARG A 716 REMARK 465 SER A 717 REMARK 465 PHE A 718 REMARK 465 HIS A 719 REMARK 465 SER A 720 REMARK 465 GLY A 721 REMARK 465 GLY A 722 REMARK 465 TYR A 723 REMARK 465 GLY A 724 REMARK 465 GLN A 725 REMARK 465 ASP A 726 REMARK 465 ALA A 727 REMARK 465 MET A 728 REMARK 465 GLY A 729 REMARK 465 MET A 730 REMARK 465 ASP A 731 REMARK 465 PRO A 732 REMARK 465 MET A 733 REMARK 465 MET A 734 REMARK 465 GLU A 735 REMARK 465 HIS A 736 REMARK 465 GLU A 737 REMARK 465 MET A 738 REMARK 465 ALA A 739 REMARK 465 GLY A 740 REMARK 465 HIS A 741 REMARK 465 HIS A 742 REMARK 465 PRO A 743 REMARK 465 GLY A 744 REMARK 465 PRO A 745 REMARK 465 ASP A 746 REMARK 465 TYR A 747 REMARK 465 PRO A 748 REMARK 465 VAL A 749 REMARK 465 ASP A 750 REMARK 465 GLY A 751 REMARK 465 LEU A 752 REMARK 465 PRO A 753 REMARK 465 ASP A 754 REMARK 465 LEU A 755 REMARK 465 GLY A 756 REMARK 465 HIS A 757 REMARK 465 THR A 758 REMARK 465 GLN A 759 REMARK 465 ASP A 760 REMARK 465 LEU A 761 REMARK 465 ILE A 762 REMARK 465 ASP A 763 REMARK 465 GLY A 764 REMARK 465 LEU A 765 REMARK 465 PRO A 766 REMARK 465 PRO A 767 REMARK 465 GLY A 768 REMARK 465 ASP A 769 REMARK 465 SER A 770 REMARK 465 ASN A 771 REMARK 465 GLN A 772 REMARK 465 LEU A 773 REMARK 465 ALA A 774 REMARK 465 TRP A 775 REMARK 465 PHE A 776 REMARK 465 ASP A 777 REMARK 465 THR A 778 REMARK 465 ASP A 779 REMARK 465 LEU A 780 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 LEU A 131 CG CD1 CD2 REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 HIS A 133 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 558 CG CD OE1 NE2 REMARK 470 LEU A 681 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 128 -80.94 -110.60 REMARK 500 TYR A 141 -70.57 -67.61 REMARK 500 ASP A 248 -71.17 -61.54 REMARK 500 LYS A 287 -171.82 -60.32 REMARK 500 THR A 329 -49.38 -142.19 REMARK 500 TYR A 332 100.79 -57.16 REMARK 500 ASP A 389 22.14 -72.87 REMARK 500 ALA A 390 -36.74 -142.58 REMARK 500 ALA A 391 24.46 -75.52 REMARK 500 ASN A 429 75.14 62.85 REMARK 500 ASN A 430 84.48 -178.51 REMARK 500 ARG A 456 77.77 -52.79 REMARK 500 GLU A 457 -7.77 -57.17 REMARK 500 SER A 472 146.25 -170.31 REMARK 500 HIS A 474 137.63 173.31 REMARK 500 GLN A 475 -72.60 -29.22 REMARK 500 ASP A 476 18.72 -66.90 REMARK 500 SER A 501 134.82 -33.27 REMARK 500 GLU A 561 19.01 53.22 REMARK 500 ASN A 593 71.16 50.64 REMARK 500 ASN A 608 -39.62 -37.63 REMARK 500 LEU A 642 -4.83 -56.55 REMARK 500 ARG A 646 35.72 -82.86 REMARK 500 ASP A 664 45.45 78.34 REMARK 500 GLN A 667 -4.61 -54.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z6H RELATED DB: PDB REMARK 900 THE SAME PROTEIN FROM HUMAN DBREF 2Z6G A 1 780 UNP Q90424 Q90424_DANRE 1 780 SEQRES 1 A 780 MET ALA THR GLN SER ASP LEU MET GLU LEU GLU MET ALA SEQRES 2 A 780 MET ASP PRO ASP ARG LYS ALA ALA VAL SER HIS TRP GLN SEQRES 3 A 780 GLN GLN SER TYR LEU ASP SER GLY ILE HIS SER GLY ALA SEQRES 4 A 780 THR THR THR ALA PRO SER LEU SER GLY LYS GLY ASN PRO SEQRES 5 A 780 GLU ASP ASP ASP VAL ASP ASN GLN VAL LEU TYR GLU TRP SEQRES 6 A 780 GLU GLN GLY PHE ASN GLN SER PHE ASN GLN GLU GLN VAL SEQRES 7 A 780 ALA ASP ILE ASP GLY GLN TYR ALA MET THR ARG ALA GLN SEQRES 8 A 780 ARG VAL ARG ALA ALA MET PHE PRO GLU THR LEU ASP GLU SEQRES 9 A 780 GLY MET GLN ILE PRO SER THR GLN PHE ASP SER ALA HIS SEQRES 10 A 780 PRO THR ASN VAL GLN ARG LEU ALA GLU PRO SER GLN MET SEQRES 11 A 780 LEU LYS HIS ALA VAL VAL ASN LEU ILE ASN TYR GLN ASP SEQRES 12 A 780 ASP ALA GLU LEU ALA THR ARG ALA ILE PRO GLU LEU THR SEQRES 13 A 780 LYS LEU LEU ASN ASP GLU ASP GLN VAL VAL VAL ASN LYS SEQRES 14 A 780 ALA ALA VAL MET VAL HIS GLN LEU SER LYS LYS GLU ALA SEQRES 15 A 780 SER ARG HIS ALA ILE MET ARG SER PRO GLN MET VAL SER SEQRES 16 A 780 ALA ILE VAL ARG THR MET GLN ASN THR ASN ASP VAL GLU SEQRES 17 A 780 THR ALA ARG CYS THR SER GLY THR LEU HIS ASN LEU SER SEQRES 18 A 780 HIS HIS ARG GLU GLY LEU LEU ALA ILE PHE LYS SER GLY SEQRES 19 A 780 GLY ILE PRO ALA LEU VAL ASN MET LEU GLY SER PRO VAL SEQRES 20 A 780 ASP SER VAL LEU PHE HIS ALA ILE THR THR LEU HIS ASN SEQRES 21 A 780 LEU LEU LEU HIS GLN GLU GLY ALA LYS MET ALA VAL ARG SEQRES 22 A 780 LEU ALA GLY GLY LEU GLN LYS MET VAL ALA LEU LEU ASN SEQRES 23 A 780 LYS THR ASN VAL LYS PHE LEU ALA ILE THR THR ASP CYS SEQRES 24 A 780 LEU GLN ILE LEU ALA TYR GLY ASN GLN GLU SER LYS LEU SEQRES 25 A 780 ILE ILE LEU ALA SER GLY GLY PRO GLN ALA LEU VAL ASN SEQRES 26 A 780 ILE MET ARG THR TYR THR TYR GLU LYS LEU LEU TRP THR SEQRES 27 A 780 THR SER ARG VAL LEU LYS VAL LEU SER VAL CYS SER SER SEQRES 28 A 780 ASN LYS PRO ALA ILE VAL GLU ALA GLY GLY MET GLN ALA SEQRES 29 A 780 LEU GLY LEU HIS LEU THR ASP PRO SER GLN ARG LEU VAL SEQRES 30 A 780 GLN ASN CYS LEU TRP THR LEU ARG ASN LEU SER ASP ALA SEQRES 31 A 780 ALA THR LYS GLN GLU GLY MET GLU GLY LEU LEU GLY THR SEQRES 32 A 780 LEU VAL GLN LEU LEU GLY SER ASP ASP ILE ASN VAL VAL SEQRES 33 A 780 THR CYS ALA ALA GLY ILE LEU SER ASN LEU THR CYS ASN SEQRES 34 A 780 ASN TYR LYS ASN LYS MET MET VAL CYS GLN VAL GLY GLY SEQRES 35 A 780 ILE GLU ALA LEU VAL ARG THR VAL LEU ARG ALA GLY ASP SEQRES 36 A 780 ARG GLU ASP ILE THR GLU PRO ALA ILE CYS ALA LEU ARG SEQRES 37 A 780 HIS LEU THR SER ARG HIS GLN ASP ALA GLU MET ALA GLN SEQRES 38 A 780 ASN ALA VAL ARG LEU HIS TYR GLY LEU PRO VAL VAL VAL SEQRES 39 A 780 LYS LEU LEU HIS PRO PRO SER HIS TRP PRO LEU ILE LYS SEQRES 40 A 780 ALA THR VAL GLY LEU ILE ARG ASN LEU ALA LEU CYS PRO SEQRES 41 A 780 ALA ASN HIS ALA PRO LEU ARG GLU GLN GLY ALA ILE PRO SEQRES 42 A 780 ARG LEU VAL GLN LEU LEU VAL ARG ALA HIS GLN ASP THR SEQRES 43 A 780 GLN ARG ARG THR SER MET GLY GLY THR GLN GLN GLN PHE SEQRES 44 A 780 VAL GLU GLY VAL ARG MET GLU GLU ILE VAL GLU ALA CYS SEQRES 45 A 780 THR GLY ALA LEU HIS ILE LEU ALA ARG ASP ILE HIS ASN SEQRES 46 A 780 ARG ILE VAL ILE ARG GLY LEU ASN THR ILE PRO LEU PHE SEQRES 47 A 780 VAL GLN LEU LEU TYR SER PRO ILE GLU ASN ILE GLN ARG SEQRES 48 A 780 VAL ALA ALA GLY VAL LEU CYS GLU LEU ALA GLN ASP LYS SEQRES 49 A 780 GLU ALA ALA GLU ALA ILE GLU ALA GLU GLY ALA THR ALA SEQRES 50 A 780 PRO LEU THR GLU LEU LEU HIS SER ARG ASN GLU GLY VAL SEQRES 51 A 780 ALA THR TYR ALA ALA ALA VAL LEU PHE ARG MET SER GLU SEQRES 52 A 780 ASP LYS PRO GLN ASP TYR LYS LYS ARG LEU SER VAL GLU SEQRES 53 A 780 LEU THR SER SER LEU PHE ARG THR GLU PRO MET THR TRP SEQRES 54 A 780 ASN GLU THR GLY ASP LEU GLY LEU ASP ILE GLY ALA GLN SEQRES 55 A 780 GLY GLU PRO LEU GLY TYR ARG GLN ASP ASP PRO SER TYR SEQRES 56 A 780 ARG SER PHE HIS SER GLY GLY TYR GLY GLN ASP ALA MET SEQRES 57 A 780 GLY MET ASP PRO MET MET GLU HIS GLU MET ALA GLY HIS SEQRES 58 A 780 HIS PRO GLY PRO ASP TYR PRO VAL ASP GLY LEU PRO ASP SEQRES 59 A 780 LEU GLY HIS THR GLN ASP LEU ILE ASP GLY LEU PRO PRO SEQRES 60 A 780 GLY ASP SER ASN GLN LEU ALA TRP PHE ASP THR ASP LEU HELIX 1 1 GLN A 129 ASP A 161 1 33 HELIX 2 2 ASP A 163 LYS A 179 1 17 HELIX 3 3 LYS A 180 MET A 188 1 9 HELIX 4 4 SER A 190 THR A 204 1 15 HELIX 5 5 ASP A 206 HIS A 222 1 17 HELIX 6 6 HIS A 223 SER A 233 1 11 HELIX 7 7 GLY A 234 LEU A 243 1 10 HELIX 8 8 VAL A 247 GLN A 265 1 19 HELIX 9 9 GLY A 267 ALA A 275 1 9 HELIX 10 10 GLY A 276 LEU A 284 1 9 HELIX 11 11 LEU A 285 LYS A 287 5 3 HELIX 12 12 ASN A 289 TYR A 305 1 17 HELIX 13 13 ASN A 307 ALA A 316 1 10 HELIX 14 14 GLY A 318 ARG A 328 1 11 HELIX 15 15 TYR A 332 VAL A 348 1 17 HELIX 16 16 SER A 351 ALA A 359 1 9 HELIX 17 17 GLY A 360 GLY A 366 1 7 HELIX 18 18 LEU A 367 LEU A 369 5 3 HELIX 19 19 SER A 373 ASP A 389 1 17 HELIX 20 20 MET A 397 LEU A 408 1 12 HELIX 21 21 ASP A 412 THR A 427 1 16 HELIX 22 22 ASN A 430 GLN A 439 1 10 HELIX 23 23 GLY A 441 GLY A 454 1 14 HELIX 24 24 ARG A 456 LEU A 470 1 15 HELIX 25 25 ASP A 476 HIS A 487 1 12 HELIX 26 26 GLY A 489 LEU A 496 1 8 HELIX 27 27 HIS A 502 LEU A 518 1 17 HELIX 28 28 CYS A 519 GLN A 529 1 11 HELIX 29 29 GLY A 530 ARG A 549 1 20 HELIX 30 30 ARG A 564 ALA A 580 1 17 HELIX 31 31 ASP A 582 LEU A 592 1 11 HELIX 32 32 THR A 594 LEU A 601 1 8 HELIX 33 33 LEU A 602 SER A 604 5 3 HELIX 34 34 ILE A 606 GLN A 622 1 17 HELIX 35 35 ASP A 623 GLU A 633 1 11 HELIX 36 36 ALA A 635 LEU A 642 1 8 HELIX 37 37 LEU A 643 SER A 645 5 3 HELIX 38 38 ASN A 647 GLU A 663 1 17 HELIX 39 39 ASP A 668 LEU A 681 1 14 CISPEP 1 PRO A 499 PRO A 500 0 -0.05 CRYST1 71.623 112.819 123.091 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013962 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008124 0.00000