HEADER OXIDOREDUCTASE 16-OCT-07 2ZB3 TITLE CRYSTAL STRUCTURE OF MOUSE 15-KETOPROSTAGLANDIN DELTA-13-REDUCTASE IN TITLE 2 COMPLEX WITH NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROSTAGLANDIN REDUCTASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PTGR2, 15-OXOPROSTAGLANDIN 13-REDUCTASE, ZINC-BINDING COMPND 5 ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROTEIN 1; COMPND 6 EC: 1.3.1.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PTGR2, ZADH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T KEYWDS ROSSMANN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.WU,A.H.J.WANG,T.P.KO,R.T.GUO,S.M.HU,L.M.CHUANG REVDAT 5 01-NOV-23 2ZB3 1 REMARK SEQADV REVDAT 4 09-JUN-09 2ZB3 1 REVDAT REVDAT 3 24-FEB-09 2ZB3 1 VERSN REVDAT 2 23-DEC-08 2ZB3 1 JRNL REVDAT 1 30-SEP-08 2ZB3 0 JRNL AUTH Y.H.WU,T.P.KO,R.T.GUO,S.M.HU,L.M.CHUANG,A.H.J.WANG JRNL TITL STRUCTURAL BASIS FOR CATALYTIC AND INHIBITORY MECHANISMS OF JRNL TITL 2 HUMAN PROSTAGLANDIN REDUCTASE PTGR2. JRNL REF STRUCTURE V. 16 1714 2008 JRNL REFN ISSN 0969-2126 JRNL PMID 19000823 JRNL DOI 10.1016/J.STR.2008.09.007 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.5 REMARK 3 NUMBER OF REFLECTIONS : 23101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1119 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 94 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.008 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 464 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.31 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.41 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZB3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000027747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL12B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24685 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.96900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1V3V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CACODYLATE, PH6.5, 27% PEG 8000, REMARK 280 80MM MG(OAC)2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.45300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.91450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.91450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.22650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.91450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.91450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 75.67950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.91450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.91450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.22650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.91450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.91450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 75.67950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 50.45300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -151.35900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 401 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 347 REMARK 465 ASP A 348 REMARK 465 SER A 349 REMARK 465 SER A 350 REMARK 465 LEU A 351 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 18 O HOH A 848 1.99 REMARK 500 O HOH A 810 O HOH A 811 2.01 REMARK 500 O HOH A 670 O HOH A 672 2.04 REMARK 500 O HOH A 635 O HOH A 831 2.05 REMARK 500 O HOH A 643 O HOH A 644 2.11 REMARK 500 O HOH A 558 O HOH A 559 2.14 REMARK 500 O HOH A 747 O HOH A 748 2.18 REMARK 500 O HOH A 624 O HOH A 858 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 783 O HOH A 783 7553 1.75 REMARK 500 ND2 ASN A 155 ND2 ASN A 155 7554 2.09 REMARK 500 O HOH A 828 O HOH A 830 3545 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 266 C - N - CA ANGL. DEV. = -18.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 154 -9.49 -56.51 REMARK 500 PRO A 222 105.29 -45.22 REMARK 500 ASP A 262 79.81 -64.90 REMARK 500 TYR A 265 -36.59 -34.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZB4 RELATED DB: PDB REMARK 900 RELATED ID: 2ZB7 RELATED DB: PDB REMARK 900 RELATED ID: 2ZB8 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FEATURE OF UNIPROT (PTGR2_MOUSE, Q8VDQ1) SHOWS CONFLICT AT THIS REMARK 999 POSITION: P -> T (IN REF. 1; BAB32284) DBREF 2ZB3 A 1 351 UNP Q8VDQ1 PTGR2_MOUSE 1 351 SEQADV 2ZB3 GLY A -1 UNP Q8VDQ1 EXPRESSION TAG SEQADV 2ZB3 SER A 0 UNP Q8VDQ1 EXPRESSION TAG SEQADV 2ZB3 THR A 18 UNP Q8VDQ1 PRO 18 SEE REMARK 999 SEQRES 1 A 353 GLY SER MET ILE ILE GLN ARG VAL VAL LEU ASN SER ARG SEQRES 2 A 353 PRO GLY LYS ASN GLY ASN THR VAL ALA GLU ASN PHE ARG SEQRES 3 A 353 VAL GLU GLU PHE SER LEU PRO ASP ALA LEU ASN GLU GLY SEQRES 4 A 353 GLN VAL GLN VAL ARG THR LEU TYR LEU SER VAL ASP PRO SEQRES 5 A 353 TYR MET ARG CYS LYS MET ASN GLU ASP THR GLY THR ASP SEQRES 6 A 353 TYR LEU ALA PRO TRP GLN LEU ALA GLN VAL ALA ASP GLY SEQRES 7 A 353 GLY GLY ILE GLY VAL VAL GLU GLU SER LYS HIS GLN LYS SEQRES 8 A 353 LEU THR LYS GLY ASP PHE VAL THR SER PHE TYR TRP PRO SEQRES 9 A 353 TRP GLN THR LYS ALA ILE LEU ASP GLY ASN GLY LEU GLU SEQRES 10 A 353 LYS VAL ASP PRO GLN LEU VAL ASP GLY HIS LEU SER TYR SEQRES 11 A 353 PHE LEU GLY ALA ILE GLY MET PRO GLY LEU THR SER LEU SEQRES 12 A 353 ILE GLY VAL GLN GLU LYS GLY HIS ILE SER ALA GLY SER SEQRES 13 A 353 ASN GLN THR MET VAL VAL SER GLY ALA ALA GLY ALA CYS SEQRES 14 A 353 GLY SER LEU ALA GLY GLN ILE GLY HIS LEU LEU GLY CYS SEQRES 15 A 353 SER ARG VAL VAL GLY ILE CYS GLY THR GLN GLU LYS CYS SEQRES 16 A 353 LEU PHE LEU THR SER GLU LEU GLY PHE ASP ALA ALA VAL SEQRES 17 A 353 ASN TYR LYS THR GLY ASN VAL ALA GLU GLN LEU ARG GLU SEQRES 18 A 353 ALA CYS PRO GLY GLY VAL ASP VAL TYR PHE ASP ASN VAL SEQRES 19 A 353 GLY GLY ASP ILE SER ASN ALA VAL ILE SER GLN MET ASN SEQRES 20 A 353 GLU ASN SER HIS ILE ILE LEU CYS GLY GLN ILE SER GLN SEQRES 21 A 353 TYR SER ASN ASP VAL PRO TYR PRO PRO PRO LEU PRO PRO SEQRES 22 A 353 ALA VAL GLU ALA ILE ARG LYS GLU ARG ASN ILE THR ARG SEQRES 23 A 353 GLU ARG PHE THR VAL LEU ASN TYR LYS ASP LYS PHE GLU SEQRES 24 A 353 PRO GLY ILE LEU GLN LEU SER GLN TRP PHE LYS GLU GLY SEQRES 25 A 353 LYS LEU LYS VAL LYS GLU THR MET ALA LYS GLY LEU GLU SEQRES 26 A 353 ASN MET GLY VAL ALA PHE GLN SER MET MET THR GLY GLY SEQRES 27 A 353 ASN VAL GLY LYS GLN ILE VAL CYS ILE SER GLU ASP SER SEQRES 28 A 353 SER LEU HET NDP A 900 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 2 NDP C21 H30 N7 O17 P3 FORMUL 3 HOH *464(H2 O) HELIX 1 1 VAL A 19 GLU A 21 5 3 HELIX 2 2 PRO A 50 MET A 56 1 7 HELIX 3 3 ASN A 112 LEU A 114 5 3 HELIX 4 4 ASP A 118 ASP A 123 5 6 HELIX 5 5 HIS A 125 GLY A 131 5 7 HELIX 6 6 GLY A 134 GLY A 148 1 15 HELIX 7 7 GLY A 165 LEU A 178 1 14 HELIX 8 8 THR A 189 GLU A 199 1 11 HELIX 9 9 LYS A 209 GLY A 211 5 3 HELIX 10 10 ASN A 212 CYS A 221 1 10 HELIX 11 11 GLY A 233 GLN A 243 1 11 HELIX 12 12 GLN A 255 TYR A 259 5 5 HELIX 13 13 PRO A 270 ASN A 281 1 12 HELIX 14 14 THR A 288 ASP A 294 5 7 HELIX 15 15 LYS A 295 GLU A 309 1 15 HELIX 16 16 ASN A 324 THR A 334 1 11 SHEET 1 A 2 ILE A 3 LEU A 8 0 SHEET 2 A 2 PHE A 23 PHE A 28 -1 O ARG A 24 N VAL A 7 SHEET 1 B 5 LYS A 106 ASP A 110 0 SHEET 2 B 5 GLN A 38 SER A 47 -1 N VAL A 41 O ALA A 107 SHEET 3 B 5 ASP A 75 SER A 85 -1 O GLU A 83 N GLN A 40 SHEET 4 B 5 PHE A 95 PRO A 102 -1 O SER A 98 N GLY A 78 SHEET 5 B 5 GLU A 115 LYS A 116 -1 O GLU A 115 N THR A 97 SHEET 1 C 4 LYS A 106 ASP A 110 0 SHEET 2 C 4 GLN A 38 SER A 47 -1 N VAL A 41 O ALA A 107 SHEET 3 C 4 LYS A 340 CYS A 344 -1 O VAL A 343 N LEU A 46 SHEET 4 C 4 GLU A 316 LYS A 320 1 N ALA A 319 O ILE A 342 SHEET 1 D 6 ALA A 204 ASN A 207 0 SHEET 2 D 6 ARG A 182 CYS A 187 1 N CYS A 187 O VAL A 206 SHEET 3 D 6 THR A 157 SER A 161 1 N MET A 158 O VAL A 184 SHEET 4 D 6 VAL A 225 ASP A 230 1 O VAL A 227 N VAL A 159 SHEET 5 D 6 MET A 244 LEU A 252 1 O HIS A 249 N TYR A 228 SHEET 6 D 6 THR A 283 ARG A 286 1 O THR A 283 N ILE A 250 SITE 1 AC1 36 PRO A 50 MET A 135 THR A 139 GLY A 165 SITE 2 AC1 36 ALA A 166 CYS A 167 CYS A 187 GLY A 188 SITE 3 AC1 36 LYS A 192 TYR A 208 ASN A 231 VAL A 232 SITE 4 AC1 36 CYS A 253 GLY A 254 GLN A 255 ILE A 256 SITE 5 AC1 36 TYR A 259 PHE A 287 VAL A 289 MET A 332 SITE 6 AC1 36 MET A 333 GLY A 335 ASN A 337 GLY A 339 SITE 7 AC1 36 HOH A 435 HOH A 452 HOH A 453 HOH A 457 SITE 8 AC1 36 HOH A 458 HOH A 464 HOH A 465 HOH A 466 SITE 9 AC1 36 HOH A 467 HOH A 546 HOH A 560 HOH A 611 CRYST1 85.829 85.829 100.906 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011651 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011651 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009910 0.00000