HEADER TRANSPORT PROTEIN 08-JAN-08 2ZFK TITLE CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN DURING MG RELEASE: MG- TITLE 2 RELEASING TRANSITION-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF1A, KINESIN HEAVY CHAIN ISOFORM 5C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KIF1A (RESIDUES 1-355), KIF5C (RESIDUES 329-334); COMPND 5 SYNONYM: AXONAL TRANSPORTER OF SYNAPTIC VESI CLES, KINESIN HEAVY COMPND 6 CHAIN NEURON-SPECIFIC 2; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: FUSION PROTEIN COMPRISES RESIDUES 1-355 OF KINESIN- COMPND 9 LIKE PROTEIN KIF1A, AND RESIDUES 329-334 OF KINESIN HEAVY CHAIN COMPND 10 ISOFORM 5C, AND C-TERMINAL TAIL WITH SEQUENCE HHHHH SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS KINESIN, ALPHA AND BETA PROTEIN, ENZYME, ATPASE, P-LOOP, MOTOR KEYWDS 2 PROTEIN, ATP-BINDING, COILED COIL, MICROTUBULE, NUCLEOTIDE-BINDING, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.NITTA,Y.OKADA,N.HIROKAWA REVDAT 5 01-NOV-23 2ZFK 1 REMARK SEQADV REVDAT 4 23-AUG-17 2ZFK 1 SOURCE REVDAT 3 05-JAN-10 2ZFK 1 JRNL REVDAT 2 24-FEB-09 2ZFK 1 VERSN REVDAT 1 23-SEP-08 2ZFK 0 JRNL AUTH R.NITTA,Y.OKADA,N.HIROKAWA JRNL TITL STRUCTURAL MODEL FOR STRAIN-DEPENDENT MICROTUBULE ACTIVATION JRNL TITL 2 OF MG-ADP RELEASE FROM KINESIN. JRNL REF NAT.STRUCT.MOL.BIOL. V. 15 1067 2008 JRNL REFN ISSN 1545-9993 JRNL PMID 18806800 JRNL DOI 10.1038/NSMB.1487 REMARK 2 REMARK 2 RESOLUTION. 3.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 287001.190 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 69.5 REMARK 3 NUMBER OF REFLECTIONS : 2671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.292 REMARK 3 FREE R VALUE : 0.349 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 264 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.021 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 42.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 229 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE : 0.4730 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 28 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.089 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2433 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.18000 REMARK 3 B22 (A**2) : 57.38000 REMARK 3 B33 (A**2) : -64.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.65 REMARK 3 ESD FROM SIGMAA (A) : 0.37 REMARK 3 LOW RESOLUTION CUTOFF (A) : 15.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.75 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.60 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.150 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 4.870 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 8.270 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.600 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 9.010 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.10 REMARK 3 BSOL : 10.20 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ADP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : TRS.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ADP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 5 : TRS.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000027908. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 3235 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1VFV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.73850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.53000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.08100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.53000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.73850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.08100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 SER A 5 REMARK 465 MET A 30 REMARK 465 SER A 31 REMARK 465 ALA A 206 REMARK 465 ALA A 207 REMARK 465 THR A 208 REMARK 465 ASN A 209 REMARK 465 MET A 210 REMARK 465 ARG A 254 REMARK 465 ALA A 255 REMARK 465 ASP A 256 REMARK 465 SER A 257 REMARK 465 THR A 258 REMARK 465 GLY A 259 REMARK 465 ALA A 260 REMARK 465 LYS A 261 REMARK 465 GLY A 262 REMARK 465 THR A 263 REMARK 465 ARG A 264 REMARK 465 LEU A 265 REMARK 465 LYS A 266 REMARK 465 ASN A 293 REMARK 465 LYS A 294 REMARK 465 ASN A 295 REMARK 465 LYS A 296 REMARK 465 LYS A 297 REMARK 465 LYS A 298 REMARK 465 LYS A 299 REMARK 465 LYS A 300 REMARK 465 THR A 301 REMARK 465 ASN A 356 REMARK 465 THR A 357 REMARK 465 VAL A 358 REMARK 465 SER A 359 REMARK 465 VAL A 360 REMARK 465 ASN A 361 REMARK 465 HIS A 362 REMARK 465 HIS A 363 REMARK 465 HIS A 364 REMARK 465 HIS A 365 REMARK 465 HIS A 366 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 29 CG CD OE1 NE2 REMARK 470 ASN A 39 CG OD1 ND2 REMARK 470 GLN A 42 CG CD OE1 NE2 REMARK 470 PRO A 43 CG CD REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 ARG A 75 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 ASP A 125 CG OD1 OD2 REMARK 470 ARG A 129 CG CD NE CZ NH1 NH2 REMARK 470 MET A 138 CG SD CE REMARK 470 ASN A 165 CG OD1 ND2 REMARK 470 LEU A 166 CG CD1 CD2 REMARK 470 SER A 182 OG REMARK 470 ASP A 194 CG OD1 OD2 REMARK 470 PRO A 202 CG CD REMARK 470 HIS A 218 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 229 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 231 CG OD1 OD2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 ASP A 302 CG OD1 OD2 REMARK 470 LEU A 314 CG CD1 CD2 REMARK 470 SER A 323 OG REMARK 470 ARG A 324 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 338 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 350 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 353 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 317 O GLY A 321 2.12 REMARK 500 OG SER A 145 O SER A 182 2.16 REMARK 500 OG SER A 309 OG1 THR A 312 2.17 REMARK 500 O GLU A 112 OE1 GLN A 116 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 43 N - CA - CB ANGL. DEV. = 7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 7 -18.85 152.05 REMARK 500 PRO A 14 -78.34 -29.43 REMARK 500 PHE A 15 144.95 -173.42 REMARK 500 SER A 17 -77.83 -34.54 REMARK 500 ARG A 18 -38.58 -31.51 REMARK 500 ARG A 22 22.24 -79.95 REMARK 500 ASP A 23 30.33 32.57 REMARK 500 LYS A 25 -146.61 -98.63 REMARK 500 ASN A 39 -28.94 -154.18 REMARK 500 PRO A 40 86.68 23.02 REMARK 500 LYS A 41 45.77 172.31 REMARK 500 GLN A 42 -28.17 179.57 REMARK 500 PRO A 43 -64.85 106.54 REMARK 500 LYS A 44 157.71 -31.55 REMARK 500 THR A 46 178.18 -50.28 REMARK 500 PRO A 47 -144.64 -66.79 REMARK 500 LYS A 48 -156.43 -102.61 REMARK 500 PHE A 50 156.65 67.24 REMARK 500 SER A 51 -79.46 -59.57 REMARK 500 PHE A 52 89.95 58.79 REMARK 500 SER A 55 62.56 -110.41 REMARK 500 SER A 58 79.03 -151.03 REMARK 500 THR A 60 -124.33 -84.29 REMARK 500 PRO A 62 12.78 -47.89 REMARK 500 ARG A 75 -10.11 -49.95 REMARK 500 ILE A 77 -66.05 -90.06 REMARK 500 GLU A 79 -72.98 -39.84 REMARK 500 GLU A 87 30.12 -78.57 REMARK 500 TYR A 89 117.33 30.00 REMARK 500 ILE A 93 102.81 -171.01 REMARK 500 THR A 99 127.74 -21.45 REMARK 500 THR A 106 5.38 -67.17 REMARK 500 MET A 107 -37.60 -133.80 REMARK 500 ASP A 114 131.92 65.99 REMARK 500 GLN A 115 42.03 108.45 REMARK 500 ILE A 119 -72.57 -55.22 REMARK 500 CYS A 123 -73.77 -47.95 REMARK 500 GLU A 124 -54.47 -23.53 REMARK 500 THR A 133 -160.50 55.38 REMARK 500 THR A 134 -28.27 162.46 REMARK 500 ASP A 136 40.60 -81.34 REMARK 500 ASN A 137 9.60 -153.35 REMARK 500 MET A 138 -90.02 -40.76 REMARK 500 SER A 139 96.26 63.18 REMARK 500 TYR A 140 -57.34 -121.18 REMARK 500 SER A 141 115.57 65.17 REMARK 500 GLU A 152 19.49 51.76 REMARK 500 VAL A 154 179.32 -55.26 REMARK 500 ARG A 155 128.70 -171.44 REMARK 500 ASN A 162 -134.75 35.31 REMARK 500 REMARK 500 THIS ENTRY HAS 99 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 2000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1VFV RELATED DB: PDB REMARK 900 RELATED ID: 1VFW RELATED DB: PDB REMARK 900 RELATED ID: 1VFX RELATED DB: PDB REMARK 900 RELATED ID: 1VFZ RELATED DB: PDB REMARK 900 RELATED ID: 1I6I RELATED DB: PDB REMARK 900 RELATED ID: 1I5S RELATED DB: PDB REMARK 900 RELATED ID: 2ZFI RELATED DB: PDB REMARK 900 RELATED ID: 2ZFJ RELATED DB: PDB REMARK 900 RELATED ID: 2ZFL RELATED DB: PDB REMARK 900 RELATED ID: 2ZFM RELATED DB: PDB DBREF 2ZFK A 1 355 UNP P33173 KIF1A_MOUSE 1 355 DBREF 2ZFK A 356 361 UNP P28738 KIF5C_MOUSE 329 334 SEQADV 2ZFK HIS A 362 UNP P28738 EXPRESSION TAG SEQADV 2ZFK HIS A 363 UNP P28738 EXPRESSION TAG SEQADV 2ZFK HIS A 364 UNP P28738 EXPRESSION TAG SEQADV 2ZFK HIS A 365 UNP P28738 EXPRESSION TAG SEQADV 2ZFK HIS A 366 UNP P28738 EXPRESSION TAG SEQRES 1 A 366 MET ALA GLY ALA SER VAL LYS VAL ALA VAL ARG VAL ARG SEQRES 2 A 366 PRO PHE ASN SER ARG GLU MET SER ARG ASP SER LYS CYS SEQRES 3 A 366 ILE ILE GLN MET SER GLY SER THR THR THR ILE VAL ASN SEQRES 4 A 366 PRO LYS GLN PRO LYS GLU THR PRO LYS SER PHE SER PHE SEQRES 5 A 366 ASP TYR SER TYR TRP SER HIS THR SER PRO GLU ASP ILE SEQRES 6 A 366 ASN TYR ALA SER GLN LYS GLN VAL TYR ARG ASP ILE GLY SEQRES 7 A 366 GLU GLU MET LEU GLN HIS ALA PHE GLU GLY TYR ASN VAL SEQRES 8 A 366 CYS ILE PHE ALA TYR GLY GLN THR GLY ALA GLY LYS SER SEQRES 9 A 366 TYR THR MET MET GLY LYS GLN GLU LYS ASP GLN GLN GLY SEQRES 10 A 366 ILE ILE PRO GLN LEU CYS GLU ASP LEU PHE SER ARG ILE SEQRES 11 A 366 ASN ASP THR THR ASN ASP ASN MET SER TYR SER VAL GLU SEQRES 12 A 366 VAL SER TYR MET GLU ILE TYR CYS GLU ARG VAL ARG ASP SEQRES 13 A 366 LEU LEU ASN PRO LYS ASN LYS GLY ASN LEU ARG VAL ARG SEQRES 14 A 366 GLU HIS PRO LEU LEU GLY PRO TYR VAL GLU ASP LEU SER SEQRES 15 A 366 LYS LEU ALA VAL THR SER TYR ASN ASP ILE GLN ASP LEU SEQRES 16 A 366 MET ASP SER GLY ASN LYS PRO ARG THR VAL ALA ALA THR SEQRES 17 A 366 ASN MET ASN GLU THR SER SER ARG SER HIS ALA VAL PHE SEQRES 18 A 366 ASN ILE ILE PHE THR GLN LYS ARG HIS ASP ALA GLU THR SEQRES 19 A 366 ASN ILE THR THR GLU LYS VAL SER LYS ILE SER LEU VAL SEQRES 20 A 366 ASP LEU ALA GLY SER GLU ARG ALA ASP SER THR GLY ALA SEQRES 21 A 366 LYS GLY THR ARG LEU LYS GLU GLY ALA ASN ILE ASN LYS SEQRES 22 A 366 SER LEU THR THR LEU GLY LYS VAL ILE SER ALA LEU ALA SEQRES 23 A 366 GLU MET ASP SER GLY PRO ASN LYS ASN LYS LYS LYS LYS SEQRES 24 A 366 LYS THR ASP PHE ILE PRO TYR ARG ASP SER VAL LEU THR SEQRES 25 A 366 TRP LEU LEU ARG GLU ASN LEU GLY GLY ASN SER ARG THR SEQRES 26 A 366 ALA MET VAL ALA ALA LEU SER PRO ALA ASP ILE ASN TYR SEQRES 27 A 366 ASP GLU THR LEU SER THR LEU ARG TYR ALA ASP ARG ALA SEQRES 28 A 366 LYS GLN ILE ARG ASN THR VAL SER VAL ASN HIS HIS HIS SEQRES 29 A 366 HIS HIS HET MG A2001 1 HET ADP A2000 27 HET TRS A2002 8 HET TRS A2003 8 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 2 MG MG 2+ FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 TRS 2(C4 H12 N O3 1+) FORMUL 6 HOH *27(H2 O) HELIX 1 1 ASN A 16 ARG A 22 1 7 HELIX 2 2 SER A 69 ILE A 77 1 9 HELIX 3 3 ILE A 77 GLU A 87 1 11 HELIX 4 4 SER A 104 GLY A 109 1 6 HELIX 5 5 GLY A 117 ASP A 132 1 16 HELIX 6 6 SER A 188 LYS A 201 1 14 HELIX 7 7 GLU A 212 SER A 215 5 4 HELIX 8 8 LYS A 273 ALA A 286 1 14 HELIX 9 9 SER A 309 LEU A 315 1 7 HELIX 10 10 ALA A 334 ILE A 336 5 3 HELIX 11 11 ASN A 337 ARG A 350 1 14 SHEET 1 A 7 TYR A 54 TYR A 56 0 SHEET 2 A 7 ALA A 9 VAL A 12 1 N VAL A 10 O TYR A 54 SHEET 3 A 7 THR A 325 LEU A 331 1 O ALA A 329 N ARG A 11 SHEET 4 A 7 VAL A 91 GLY A 97 1 N TYR A 96 O VAL A 328 SHEET 5 A 7 THR A 238 GLY A 251 1 O VAL A 247 N ALA A 95 SHEET 6 A 7 SER A 217 ARG A 229 -1 N GLN A 227 O LYS A 240 SHEET 7 A 7 VAL A 142 TYR A 150 -1 N GLU A 143 O ILE A 224 SHEET 1 B 2 VAL A 168 HIS A 171 0 SHEET 2 B 2 GLY A 175 VAL A 178 -1 O TYR A 177 N ARG A 169 LINK OG SER A 104 MG MG A2001 1555 1555 2.69 CISPEP 1 THR A 46 PRO A 47 0 0.22 SITE 1 AC1 1 SER A 104 SITE 1 AC2 12 ARG A 13 SER A 58 ASP A 64 ILE A 65 SITE 2 AC2 12 TYR A 67 GLN A 98 GLY A 100 ALA A 101 SITE 3 AC2 12 GLY A 102 LYS A 103 SER A 104 TYR A 105 CRYST1 39.477 50.162 157.060 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025331 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006367 0.00000