data_2ZK9 # _entry.id 2ZK9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2ZK9 RCSB RCSB028077 WWPDB D_1000028077 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2009-03-17 _pdbx_database_PDB_obs_spr.pdb_id 2ZK9 _pdbx_database_PDB_obs_spr.replace_pdb_id 2Z8T _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3A54 'The A47Q mutant of this entry' unspecified PDB 3A55 'The A47Q mutant of this entry' unspecified PDB 3A56 'Wild protein of this entry' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZK9 _pdbx_database_status.recvd_initial_deposition_date 2008-03-13 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Hashizume, R.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structures of protein glutaminase and its pro forms converted into enzyme-substrate complex' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 38691 _citation.page_last 38702 _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21926168 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.255133 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hashizume, R.' 1 primary 'Maki, Y.' 2 primary 'Mizutani, K.' 3 primary 'Takahashi, N.' 4 primary 'Matsubara, H.' 5 primary 'Sugita, A.' 6 primary 'Sato, K.' 7 primary 'Yamaguchi, S.' 8 primary 'Mikami, B.' 9 # _cell.entry_id 2ZK9 _cell.length_a 62.306 _cell.length_b 62.306 _cell.length_c 185.532 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZK9 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protein-glutaminase 19876.283 1 3.5.1.- ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 448 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LASVIPDVATLNSLFNQIKNESCGTSTASSPCITFRYPVDGCYARAHKMRQILMNNGYDCEKQFVYGNLKASTGTCCVAW SYHVAILVSYKNASGVTEKRIIDPSLFSSGPVTDTAWRNACVNTSCGSASVSSYANTAGNVYYRSPSNSYLYDNNLINTN CVLTKFSLLSGCSPSPAPDVSSCGF ; _entity_poly.pdbx_seq_one_letter_code_can ;LASVIPDVATLNSLFNQIKNESCGTSTASSPCITFRYPVDGCYARAHKMRQILMNNGYDCEKQFVYGNLKASTGTCCVAW SYHVAILVSYKNASGVTEKRIIDPSLFSSGPVTDTAWRNACVNTSCGSASVSSYANTAGNVYYRSPSNSYLYDNNLINTN CVLTKFSLLSGCSPSPAPDVSSCGF ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ALA n 1 3 SER n 1 4 VAL n 1 5 ILE n 1 6 PRO n 1 7 ASP n 1 8 VAL n 1 9 ALA n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 SER n 1 14 LEU n 1 15 PHE n 1 16 ASN n 1 17 GLN n 1 18 ILE n 1 19 LYS n 1 20 ASN n 1 21 GLU n 1 22 SER n 1 23 CYS n 1 24 GLY n 1 25 THR n 1 26 SER n 1 27 THR n 1 28 ALA n 1 29 SER n 1 30 SER n 1 31 PRO n 1 32 CYS n 1 33 ILE n 1 34 THR n 1 35 PHE n 1 36 ARG n 1 37 TYR n 1 38 PRO n 1 39 VAL n 1 40 ASP n 1 41 GLY n 1 42 CYS n 1 43 TYR n 1 44 ALA n 1 45 ARG n 1 46 ALA n 1 47 HIS n 1 48 LYS n 1 49 MET n 1 50 ARG n 1 51 GLN n 1 52 ILE n 1 53 LEU n 1 54 MET n 1 55 ASN n 1 56 ASN n 1 57 GLY n 1 58 TYR n 1 59 ASP n 1 60 CYS n 1 61 GLU n 1 62 LYS n 1 63 GLN n 1 64 PHE n 1 65 VAL n 1 66 TYR n 1 67 GLY n 1 68 ASN n 1 69 LEU n 1 70 LYS n 1 71 ALA n 1 72 SER n 1 73 THR n 1 74 GLY n 1 75 THR n 1 76 CYS n 1 77 CYS n 1 78 VAL n 1 79 ALA n 1 80 TRP n 1 81 SER n 1 82 TYR n 1 83 HIS n 1 84 VAL n 1 85 ALA n 1 86 ILE n 1 87 LEU n 1 88 VAL n 1 89 SER n 1 90 TYR n 1 91 LYS n 1 92 ASN n 1 93 ALA n 1 94 SER n 1 95 GLY n 1 96 VAL n 1 97 THR n 1 98 GLU n 1 99 LYS n 1 100 ARG n 1 101 ILE n 1 102 ILE n 1 103 ASP n 1 104 PRO n 1 105 SER n 1 106 LEU n 1 107 PHE n 1 108 SER n 1 109 SER n 1 110 GLY n 1 111 PRO n 1 112 VAL n 1 113 THR n 1 114 ASP n 1 115 THR n 1 116 ALA n 1 117 TRP n 1 118 ARG n 1 119 ASN n 1 120 ALA n 1 121 CYS n 1 122 VAL n 1 123 ASN n 1 124 THR n 1 125 SER n 1 126 CYS n 1 127 GLY n 1 128 SER n 1 129 ALA n 1 130 SER n 1 131 VAL n 1 132 SER n 1 133 SER n 1 134 TYR n 1 135 ALA n 1 136 ASN n 1 137 THR n 1 138 ALA n 1 139 GLY n 1 140 ASN n 1 141 VAL n 1 142 TYR n 1 143 TYR n 1 144 ARG n 1 145 SER n 1 146 PRO n 1 147 SER n 1 148 ASN n 1 149 SER n 1 150 TYR n 1 151 LEU n 1 152 TYR n 1 153 ASP n 1 154 ASN n 1 155 ASN n 1 156 LEU n 1 157 ILE n 1 158 ASN n 1 159 THR n 1 160 ASN n 1 161 CYS n 1 162 VAL n 1 163 LEU n 1 164 THR n 1 165 LYS n 1 166 PHE n 1 167 SER n 1 168 LEU n 1 169 LEU n 1 170 SER n 1 171 GLY n 1 172 CYS n 1 173 SER n 1 174 PRO n 1 175 SER n 1 176 PRO n 1 177 ALA n 1 178 PRO n 1 179 ASP n 1 180 VAL n 1 181 SER n 1 182 SER n 1 183 CYS n 1 184 GLY n 1 185 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 9670 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chryseobacterium proteolyticum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 118127 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pN7-9 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9AQQ8_9FLAO _struct_ref.pdbx_db_accession Q9AQQ8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LASVIPDVATLNSLFNQIKNQSCGTSTASSPCITFRYPVDGCYARAHKMRQILMNNGYDCEKQFVYGNLKASTGTCCVAW SYHVAILVSYKNASGVTEKRIIDPSLFSSGPVTDTAWRNACVNTSCGSASVSSYANTAGNVYYRSPSNSYLYDNNLINTN CVLTKFSLLSGCSPSPAPDVSSCGF ; _struct_ref.pdbx_align_begin 136 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ZK9 _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 185 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9AQQ8 _struct_ref_seq.db_align_beg 136 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 320 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 185 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2ZK9 _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id X _struct_ref_seq_dif.seq_num 21 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9AQQ8 _struct_ref_seq_dif.db_mon_id GLN _struct_ref_seq_dif.pdbx_seq_db_seq_num 156 _struct_ref_seq_dif.details 'SEE REMARK 999' _struct_ref_seq_dif.pdbx_auth_seq_num 21 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZK9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_percent_sol 52.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '0.1M sodium citrate, 1M Ammonium Phosphate , pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS V' _diffrn_detector.pdbx_collection_date 2007-07-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL38B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL38B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.entry_id 2ZK9 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.15 _reflns.d_resolution_low 50.0 _reflns.number_all 76489 _reflns.number_obs 76207 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 12.68 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 2ZK9 _refine.ls_number_reflns_obs 72390 _refine.ls_number_reflns_all 72390 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.15 _refine.ls_percent_reflns_obs 94.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.0979 _refine.ls_R_factor_R_free 0.1359 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters 19019 _refine.ls_number_restraints 26255 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'AB INITIO' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2ZK9 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 101 _refine_analyze.occupancy_sum_hydrogen 1277.97 _refine_analyze.occupancy_sum_non_hydrogen 1839.46 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1388 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 448 _refine_hist.number_atoms_total 1843 _refine_hist.d_res_high 1.15 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.031 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0315 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.102 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.089 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.115 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.041 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.110 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2ZK9 _pdbx_refine.R_factor_all_no_cutoff 0.0979 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.0921 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 66286 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2ZK9 _struct.title 'Crystal Structure of Protein-glutaminase' _struct.pdbx_descriptor 'Protein-glutaminase (E.C.3.5.1._)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZK9 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'deamidation glutaminase, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 7 ? ASN A 20 ? ASP X 7 ASN X 20 1 ? 14 HELX_P HELX_P2 2 GLY A 41 ? ASN A 56 ? GLY X 41 ASN X 56 1 ? 16 HELX_P HELX_P3 3 THR A 113 ? CYS A 121 ? THR X 113 CYS X 121 1 ? 9 HELX_P HELX_P4 4 VAL A 122 ? GLY A 127 ? VAL X 122 GLY X 127 5 ? 6 HELX_P HELX_P5 5 LEU A 156 ? PHE A 166 ? LEU X 156 PHE X 166 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 32 SG A ? X CYS 23 X CYS 32 1_555 ? ? ? ? ? ? ? 2.101 ? disulf2 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 32 SG B ? X CYS 23 X CYS 32 1_555 ? ? ? ? ? ? ? 2.646 ? disulf3 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 172 SG ? ? X CYS 76 X CYS 172 1_555 ? ? ? ? ? ? ? 2.068 ? disulf4 disulf ? ? A CYS 77 SG ? ? ? 1_555 A CYS 126 SG A ? X CYS 77 X CYS 126 1_555 ? ? ? ? ? ? ? 1.982 ? disulf5 disulf ? ? A CYS 77 SG ? ? ? 1_555 A CYS 126 SG B ? X CYS 77 X CYS 126 1_555 ? ? ? ? ? ? ? 2.629 ? disulf6 disulf ? ? A CYS 161 SG A ? ? 1_555 A CYS 183 SG A ? X CYS 161 X CYS 183 1_555 ? ? ? ? ? ? ? 2.003 ? disulf7 disulf ? ? A CYS 161 SG B ? ? 1_555 A CYS 183 SG B ? X CYS 161 X CYS 183 1_555 ? ? ? ? ? ? ? 2.693 ? metalc1 metalc ? ? B NA . NA ? ? ? 1_555 D HOH . O ? ? X NA 501 X HOH 619 1_555 ? ? ? ? ? ? ? 2.500 ? metalc2 metalc ? ? B NA . NA ? ? ? 1_555 D HOH . O ? ? X NA 501 X HOH 789 1_555 ? ? ? ? ? ? ? 2.949 ? metalc3 metalc ? ? B NA . NA ? ? ? 1_555 D HOH . O B ? X NA 501 X HOH 565 1_555 ? ? ? ? ? ? ? 3.043 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 30 A . ? SER 30 X PRO 31 A ? PRO 31 X 1 -19.84 2 SER 30 A . ? SER 30 X PRO 31 A ? PRO 31 X 1 -1.29 3 SER 173 A . ? SER 173 X PRO 174 A ? PRO 174 X 1 -2.68 4 SER 173 A . ? SER 173 X PRO 174 A ? PRO 174 X 1 -2.58 5 SER 175 A . ? SER 175 X PRO 176 A ? PRO 176 X 1 0.29 6 SER 175 A . ? SER 175 X PRO 176 A ? PRO 176 X 1 -2.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 4 ? ILE A 5 ? VAL X 4 ILE X 5 A 2 CYS A 77 ? LYS A 91 ? CYS X 77 LYS X 91 A 3 THR A 97 ? ILE A 102 ? THR X 97 ILE X 102 B 1 VAL A 4 ? ILE A 5 ? VAL X 4 ILE X 5 B 2 CYS A 77 ? LYS A 91 ? CYS X 77 LYS X 91 B 3 GLU A 61 ? SER A 72 ? GLU X 61 SER X 72 B 4 SER A 130 ? ALA A 138 ? SER X 130 ALA X 138 C 1 VAL A 141 ? ARG A 144 ? VAL X 141 ARG X 144 C 2 TYR A 150 ? TYR A 152 ? TYR X 150 TYR X 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 5 ? N ILE X 5 O SER A 89 ? O SER X 89 A 2 3 N VAL A 88 ? N VAL X 88 O ARG A 100 ? O ARG X 100 B 1 2 N ILE A 5 ? N ILE X 5 O SER A 89 ? O SER X 89 B 2 3 O VAL A 78 ? O VAL X 78 N ALA A 71 ? N ALA X 71 B 3 4 N PHE A 64 ? N PHE X 64 O ALA A 135 ? O ALA X 135 C 1 2 N TYR A 142 ? N TYR X 142 O LEU A 151 ? O LEU X 151 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 ? ? ? ? ? 5 'BINDING SITE FOR RESIDUE NA X 501' AC2 ? ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL X 201' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NA X 501' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL X 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLY A 41 ? GLY X 41 . ? 1_555 ? 2 AC1 5 CYS A 42 ? CYS X 42 . ? 1_555 ? 3 AC1 5 HOH D . ? HOH X 565 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH X 619 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH X 789 . ? 1_555 ? 6 AC2 5 TYR A 43 ? TYR X 43 . ? 1_555 ? 7 AC2 5 TYR A 82 ? TYR X 82 . ? 1_555 ? 8 AC2 5 PHE A 185 ? PHE X 185 . ? 1_555 ? 9 AC2 5 HOH D . ? HOH X 642 . ? 1_555 ? 10 AC2 5 HOH D . ? HOH X 703 . ? 1_555 ? 11 AC3 5 GLY A 41 ? GLY X 41 . ? 1_555 ? 12 AC3 5 CYS A 42 ? CYS X 42 . ? 1_555 ? 13 AC3 5 HOH D . ? HOH X 565 . ? 1_555 ? 14 AC3 5 HOH D . ? HOH X 619 . ? 1_555 ? 15 AC3 5 HOH D . ? HOH X 789 . ? 1_555 ? 16 AC4 5 TYR A 43 ? TYR X 43 . ? 1_555 ? 17 AC4 5 TYR A 82 ? TYR X 82 . ? 1_555 ? 18 AC4 5 PHE A 185 ? PHE X 185 . ? 1_555 ? 19 AC4 5 HOH D . ? HOH X 642 . ? 1_555 ? 20 AC4 5 HOH D . ? HOH X 703 . ? 8_666 ? # _database_PDB_matrix.entry_id 2ZK9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZK9 _atom_sites.fract_transf_matrix[1][1] 0.016050 _atom_sites.fract_transf_matrix[1][2] 0.009266 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018533 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005390 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU X . n A 1 2 ALA 2 2 2 ALA ALA X . n A 1 3 SER 3 3 3 SER SER X . n A 1 4 VAL 4 4 4 VAL VAL X . n A 1 5 ILE 5 5 5 ILE ILE X . n A 1 6 PRO 6 6 6 PRO PRO X . n A 1 7 ASP 7 7 7 ASP ASP X . n A 1 8 VAL 8 8 8 VAL VAL X . n A 1 9 ALA 9 9 9 ALA ALA X . n A 1 10 THR 10 10 10 THR THR X . n A 1 11 LEU 11 11 11 LEU LEU X . n A 1 12 ASN 12 12 12 ASN ASN X . n A 1 13 SER 13 13 13 SER SER X . n A 1 14 LEU 14 14 14 LEU LEU X . n A 1 15 PHE 15 15 15 PHE PHE X . n A 1 16 ASN 16 16 16 ASN ASN X . n A 1 17 GLN 17 17 17 GLN GLN X . n A 1 18 ILE 18 18 18 ILE ILE X . n A 1 19 LYS 19 19 19 LYS LYS X . n A 1 20 ASN 20 20 20 ASN ASN X . n A 1 21 GLU 21 21 21 GLU GLU X . n A 1 22 SER 22 22 22 SER SER X . n A 1 23 CYS 23 23 23 CYS CYS X . n A 1 24 GLY 24 24 24 GLY GLY X . n A 1 25 THR 25 25 25 THR THR X . n A 1 26 SER 26 26 26 SER SER X . n A 1 27 THR 27 27 27 THR THR X . n A 1 28 ALA 28 28 28 ALA ALA X . n A 1 29 SER 29 29 29 SER SER X . n A 1 30 SER 30 30 30 SER SER X . n A 1 31 PRO 31 31 31 PRO PRO X . n A 1 32 CYS 32 32 32 CYS CYS X . n A 1 33 ILE 33 33 33 ILE ILE X . n A 1 34 THR 34 34 34 THR THR X . n A 1 35 PHE 35 35 35 PHE PHE X . n A 1 36 ARG 36 36 36 ARG ARG X . n A 1 37 TYR 37 37 37 TYR TYR X . n A 1 38 PRO 38 38 38 PRO PRO X . n A 1 39 VAL 39 39 39 VAL VAL X . n A 1 40 ASP 40 40 40 ASP ASP X . n A 1 41 GLY 41 41 41 GLY GLY X . n A 1 42 CYS 42 42 42 CYS CYS X . n A 1 43 TYR 43 43 43 TYR TYR X . n A 1 44 ALA 44 44 44 ALA ALA X . n A 1 45 ARG 45 45 45 ARG ARG X . n A 1 46 ALA 46 46 46 ALA ALA X . n A 1 47 HIS 47 47 47 HIS HIS X . n A 1 48 LYS 48 48 48 LYS LYS X . n A 1 49 MET 49 49 49 MET MET X . n A 1 50 ARG 50 50 50 ARG ARG X . n A 1 51 GLN 51 51 51 GLN GLN X . n A 1 52 ILE 52 52 52 ILE ILE X . n A 1 53 LEU 53 53 53 LEU LEU X . n A 1 54 MET 54 54 54 MET MET X . n A 1 55 ASN 55 55 55 ASN ASN X . n A 1 56 ASN 56 56 56 ASN ASN X . n A 1 57 GLY 57 57 57 GLY GLY X . n A 1 58 TYR 58 58 58 TYR TYR X . n A 1 59 ASP 59 59 59 ASP ASP X . n A 1 60 CYS 60 60 60 CYS CYS X . n A 1 61 GLU 61 61 61 GLU GLU X . n A 1 62 LYS 62 62 62 LYS LYS X . n A 1 63 GLN 63 63 63 GLN GLN X . n A 1 64 PHE 64 64 64 PHE PHE X . n A 1 65 VAL 65 65 65 VAL VAL X . n A 1 66 TYR 66 66 66 TYR TYR X . n A 1 67 GLY 67 67 67 GLY GLY X . n A 1 68 ASN 68 68 68 ASN ASN X . n A 1 69 LEU 69 69 69 LEU LEU X . n A 1 70 LYS 70 70 70 LYS LYS X . n A 1 71 ALA 71 71 71 ALA ALA X . n A 1 72 SER 72 72 72 SER SER X . n A 1 73 THR 73 73 73 THR THR X . n A 1 74 GLY 74 74 74 GLY GLY X . n A 1 75 THR 75 75 75 THR THR X . n A 1 76 CYS 76 76 76 CYS CYS X . n A 1 77 CYS 77 77 77 CYS CYS X . n A 1 78 VAL 78 78 78 VAL VAL X . n A 1 79 ALA 79 79 79 ALA ALA X . n A 1 80 TRP 80 80 80 TRP TRP X . n A 1 81 SER 81 81 81 SER SER X . n A 1 82 TYR 82 82 82 TYR TYR X . n A 1 83 HIS 83 83 83 HIS HIS X . n A 1 84 VAL 84 84 84 VAL VAL X . n A 1 85 ALA 85 85 85 ALA ALA X . n A 1 86 ILE 86 86 86 ILE ILE X . n A 1 87 LEU 87 87 87 LEU LEU X . n A 1 88 VAL 88 88 88 VAL VAL X . n A 1 89 SER 89 89 89 SER SER X . n A 1 90 TYR 90 90 90 TYR TYR X . n A 1 91 LYS 91 91 91 LYS LYS X . n A 1 92 ASN 92 92 92 ASN ASN X . n A 1 93 ALA 93 93 93 ALA ALA X . n A 1 94 SER 94 94 94 SER SER X . n A 1 95 GLY 95 95 95 GLY GLY X . n A 1 96 VAL 96 96 96 VAL VAL X . n A 1 97 THR 97 97 97 THR THR X . n A 1 98 GLU 98 98 98 GLU GLU X . n A 1 99 LYS 99 99 99 LYS LYS X . n A 1 100 ARG 100 100 100 ARG ARG X . n A 1 101 ILE 101 101 101 ILE ILE X . n A 1 102 ILE 102 102 102 ILE ILE X . n A 1 103 ASP 103 103 103 ASP ASP X . n A 1 104 PRO 104 104 104 PRO PRO X . n A 1 105 SER 105 105 105 SER SER X . n A 1 106 LEU 106 106 106 LEU LEU X . n A 1 107 PHE 107 107 107 PHE PHE X . n A 1 108 SER 108 108 108 SER SER X . n A 1 109 SER 109 109 109 SER SER X . n A 1 110 GLY 110 110 110 GLY GLY X . n A 1 111 PRO 111 111 111 PRO PRO X . n A 1 112 VAL 112 112 112 VAL VAL X . n A 1 113 THR 113 113 113 THR THR X . n A 1 114 ASP 114 114 114 ASP ASP X . n A 1 115 THR 115 115 115 THR THR X . n A 1 116 ALA 116 116 116 ALA ALA X . n A 1 117 TRP 117 117 117 TRP TRP X . n A 1 118 ARG 118 118 118 ARG ARG X . n A 1 119 ASN 119 119 119 ASN ASN X . n A 1 120 ALA 120 120 120 ALA ALA X . n A 1 121 CYS 121 121 121 CYS CYS X . n A 1 122 VAL 122 122 122 VAL VAL X . n A 1 123 ASN 123 123 123 ASN ASN X . n A 1 124 THR 124 124 124 THR THR X . n A 1 125 SER 125 125 125 SER SER X . n A 1 126 CYS 126 126 126 CYS CYS X . n A 1 127 GLY 127 127 127 GLY GLY X . n A 1 128 SER 128 128 128 SER SER X . n A 1 129 ALA 129 129 129 ALA ALA X . n A 1 130 SER 130 130 130 SER SER X . n A 1 131 VAL 131 131 131 VAL VAL X . n A 1 132 SER 132 132 132 SER SER X . n A 1 133 SER 133 133 133 SER SER X . n A 1 134 TYR 134 134 134 TYR TYR X . n A 1 135 ALA 135 135 135 ALA ALA X . n A 1 136 ASN 136 136 136 ASN ASN X . n A 1 137 THR 137 137 137 THR THR X . n A 1 138 ALA 138 138 138 ALA ALA X . n A 1 139 GLY 139 139 139 GLY GLY X . n A 1 140 ASN 140 140 140 ASN ASN X . n A 1 141 VAL 141 141 141 VAL VAL X . n A 1 142 TYR 142 142 142 TYR TYR X . n A 1 143 TYR 143 143 143 TYR TYR X . n A 1 144 ARG 144 144 144 ARG ARG X . n A 1 145 SER 145 145 145 SER SER X . n A 1 146 PRO 146 146 146 PRO PRO X . n A 1 147 SER 147 147 147 SER SER X . n A 1 148 ASN 148 148 148 ASN ASN X . n A 1 149 SER 149 149 149 SER SER X . n A 1 150 TYR 150 150 150 TYR TYR X . n A 1 151 LEU 151 151 151 LEU LEU X . n A 1 152 TYR 152 152 152 TYR TYR X . n A 1 153 ASP 153 153 153 ASP ASP X . n A 1 154 ASN 154 154 154 ASN ASN X . n A 1 155 ASN 155 155 155 ASN ASN X . n A 1 156 LEU 156 156 156 LEU LEU X . n A 1 157 ILE 157 157 157 ILE ILE X . n A 1 158 ASN 158 158 158 ASN ASN X . n A 1 159 THR 159 159 159 THR THR X . n A 1 160 ASN 160 160 160 ASN ASN X . n A 1 161 CYS 161 161 161 CYS CYS X . n A 1 162 VAL 162 162 162 VAL VAL X . n A 1 163 LEU 163 163 163 LEU LEU X . n A 1 164 THR 164 164 164 THR THR X . n A 1 165 LYS 165 165 165 LYS LYS X . n A 1 166 PHE 166 166 166 PHE PHE X . n A 1 167 SER 167 167 167 SER SER X . n A 1 168 LEU 168 168 168 LEU LEU X . n A 1 169 LEU 169 169 169 LEU LEU X . n A 1 170 SER 170 170 170 SER SER X . n A 1 171 GLY 171 171 171 GLY GLY X . n A 1 172 CYS 172 172 172 CYS CYS X . n A 1 173 SER 173 173 173 SER SER X . n A 1 174 PRO 174 174 174 PRO PRO X . n A 1 175 SER 175 175 175 SER SER X . n A 1 176 PRO 176 176 176 PRO PRO X . n A 1 177 ALA 177 177 177 ALA ALA X . n A 1 178 PRO 178 178 178 PRO PRO X . n A 1 179 ASP 179 179 179 ASP ASP X . n A 1 180 VAL 180 180 180 VAL VAL X . n A 1 181 SER 181 181 181 SER SER X . n A 1 182 SER 182 182 182 SER SER X . n A 1 183 CYS 183 183 183 CYS CYS X . n A 1 184 GLY 184 184 184 GLY GLY X . n A 1 185 PHE 185 185 185 PHE PHE X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 501 501 NA NA X . C 3 GOL 1 201 201 GOL GOL X . D 4 HOH 1 502 502 HOH HOH X . D 4 HOH 2 503 503 HOH HOH X . D 4 HOH 3 504 504 HOH HOH X . D 4 HOH 4 505 505 HOH HOH X . D 4 HOH 5 506 506 HOH HOH X . D 4 HOH 6 507 507 HOH HOH X . D 4 HOH 7 508 508 HOH HOH X . D 4 HOH 8 509 509 HOH HOH X . D 4 HOH 9 510 510 HOH HOH X . D 4 HOH 10 511 511 HOH HOH X . D 4 HOH 11 512 512 HOH HOH X . D 4 HOH 12 513 513 HOH HOH X . D 4 HOH 13 514 514 HOH HOH X . D 4 HOH 14 515 515 HOH HOH X . D 4 HOH 15 516 516 HOH HOH X . D 4 HOH 16 517 517 HOH HOH X . D 4 HOH 17 518 518 HOH HOH X . D 4 HOH 18 519 519 HOH HOH X . D 4 HOH 19 520 520 HOH HOH X . D 4 HOH 20 521 521 HOH HOH X . D 4 HOH 21 522 522 HOH HOH X . D 4 HOH 22 523 523 HOH HOH X . D 4 HOH 23 524 524 HOH HOH X . D 4 HOH 24 525 525 HOH HOH X . D 4 HOH 25 526 526 HOH HOH X . D 4 HOH 26 527 527 HOH HOH X . D 4 HOH 27 528 528 HOH HOH X . D 4 HOH 28 529 529 HOH HOH X . D 4 HOH 29 530 530 HOH HOH X . D 4 HOH 30 531 531 HOH HOH X . D 4 HOH 31 532 532 HOH HOH X . D 4 HOH 32 533 533 HOH HOH X . D 4 HOH 33 534 534 HOH HOH X . D 4 HOH 34 535 535 HOH HOH X . D 4 HOH 35 536 536 HOH HOH X . D 4 HOH 36 537 537 HOH HOH X . D 4 HOH 37 538 538 HOH HOH X . D 4 HOH 38 539 539 HOH HOH X . D 4 HOH 39 540 540 HOH HOH X . D 4 HOH 40 541 541 HOH HOH X . D 4 HOH 41 542 542 HOH HOH X . D 4 HOH 42 543 543 HOH HOH X . D 4 HOH 43 544 544 HOH HOH X . D 4 HOH 44 545 545 HOH HOH X . D 4 HOH 45 546 546 HOH HOH X . D 4 HOH 46 547 547 HOH HOH X . D 4 HOH 47 548 548 HOH HOH X . D 4 HOH 48 549 549 HOH HOH X . D 4 HOH 49 550 550 HOH HOH X . D 4 HOH 50 551 551 HOH HOH X . D 4 HOH 51 552 552 HOH HOH X . D 4 HOH 52 553 553 HOH HOH X . D 4 HOH 53 554 554 HOH HOH X . D 4 HOH 54 555 555 HOH HOH X . D 4 HOH 55 556 556 HOH HOH X . D 4 HOH 56 557 557 HOH HOH X . D 4 HOH 57 558 558 HOH HOH X . D 4 HOH 58 559 559 HOH HOH X . D 4 HOH 59 560 560 HOH HOH X . D 4 HOH 60 561 561 HOH HOH X . D 4 HOH 61 562 562 HOH HOH X . D 4 HOH 62 563 563 HOH HOH X . D 4 HOH 63 564 564 HOH HOH X . D 4 HOH 64 565 565 HOH HOH X . D 4 HOH 65 566 566 HOH HOH X . D 4 HOH 66 567 567 HOH HOH X . D 4 HOH 67 568 568 HOH HOH X . D 4 HOH 68 569 569 HOH HOH X . D 4 HOH 69 570 570 HOH HOH X . D 4 HOH 70 571 571 HOH HOH X . D 4 HOH 71 572 572 HOH HOH X . D 4 HOH 72 573 573 HOH HOH X . D 4 HOH 73 574 574 HOH HOH X . D 4 HOH 74 575 575 HOH HOH X . D 4 HOH 75 576 576 HOH HOH X . D 4 HOH 76 577 577 HOH HOH X . D 4 HOH 77 578 578 HOH HOH X . D 4 HOH 78 579 579 HOH HOH X . D 4 HOH 79 580 580 HOH HOH X . D 4 HOH 80 581 581 HOH HOH X . D 4 HOH 81 582 582 HOH HOH X . D 4 HOH 82 583 583 HOH HOH X . D 4 HOH 83 584 584 HOH HOH X . D 4 HOH 84 585 585 HOH HOH X . D 4 HOH 85 586 586 HOH HOH X . D 4 HOH 86 587 587 HOH HOH X . D 4 HOH 87 588 588 HOH HOH X . D 4 HOH 88 589 589 HOH HOH X . D 4 HOH 89 590 590 HOH HOH X . D 4 HOH 90 591 591 HOH HOH X . D 4 HOH 91 592 592 HOH HOH X . D 4 HOH 92 593 593 HOH HOH X . D 4 HOH 93 594 594 HOH HOH X . D 4 HOH 94 595 595 HOH HOH X . D 4 HOH 95 596 596 HOH HOH X . D 4 HOH 96 597 597 HOH HOH X . D 4 HOH 97 598 598 HOH HOH X . D 4 HOH 98 599 599 HOH HOH X . D 4 HOH 99 600 600 HOH HOH X . D 4 HOH 100 601 601 HOH HOH X . D 4 HOH 101 602 602 HOH HOH X . D 4 HOH 102 603 603 HOH HOH X . D 4 HOH 103 604 604 HOH HOH X . D 4 HOH 104 605 605 HOH HOH X . D 4 HOH 105 606 606 HOH HOH X . D 4 HOH 106 607 607 HOH HOH X . D 4 HOH 107 608 608 HOH HOH X . D 4 HOH 108 609 609 HOH HOH X . D 4 HOH 109 610 610 HOH HOH X . D 4 HOH 110 611 611 HOH HOH X . D 4 HOH 111 612 612 HOH HOH X . D 4 HOH 112 613 613 HOH HOH X . D 4 HOH 113 614 614 HOH HOH X . D 4 HOH 114 615 615 HOH HOH X . D 4 HOH 115 616 616 HOH HOH X . D 4 HOH 116 617 617 HOH HOH X . D 4 HOH 117 618 618 HOH HOH X . D 4 HOH 118 619 619 HOH HOH X . D 4 HOH 119 620 620 HOH HOH X . D 4 HOH 120 621 621 HOH HOH X . D 4 HOH 121 622 622 HOH HOH X . D 4 HOH 122 623 623 HOH HOH X . D 4 HOH 123 624 624 HOH HOH X . D 4 HOH 124 625 625 HOH HOH X . D 4 HOH 125 626 626 HOH HOH X . D 4 HOH 126 627 627 HOH HOH X . D 4 HOH 127 628 628 HOH HOH X . D 4 HOH 128 629 629 HOH HOH X . D 4 HOH 129 630 630 HOH HOH X . D 4 HOH 130 631 631 HOH HOH X . D 4 HOH 131 632 632 HOH HOH X . D 4 HOH 132 633 633 HOH HOH X . D 4 HOH 133 634 634 HOH HOH X . D 4 HOH 134 635 635 HOH HOH X . D 4 HOH 135 636 636 HOH HOH X . D 4 HOH 136 637 637 HOH HOH X . D 4 HOH 137 638 638 HOH HOH X . D 4 HOH 138 639 639 HOH HOH X . D 4 HOH 139 640 640 HOH HOH X . D 4 HOH 140 641 641 HOH HOH X . D 4 HOH 141 642 642 HOH HOH X . D 4 HOH 142 643 643 HOH HOH X . D 4 HOH 143 644 644 HOH HOH X . D 4 HOH 144 645 645 HOH HOH X . D 4 HOH 145 646 646 HOH HOH X . D 4 HOH 146 647 647 HOH HOH X . D 4 HOH 147 648 648 HOH HOH X . D 4 HOH 148 649 649 HOH HOH X . D 4 HOH 149 650 650 HOH HOH X . D 4 HOH 150 651 651 HOH HOH X . D 4 HOH 151 652 652 HOH HOH X . D 4 HOH 152 653 653 HOH HOH X . D 4 HOH 153 654 654 HOH HOH X . D 4 HOH 154 655 655 HOH HOH X . D 4 HOH 155 656 656 HOH HOH X . D 4 HOH 156 657 657 HOH HOH X . D 4 HOH 157 658 658 HOH HOH X . D 4 HOH 158 659 659 HOH HOH X . D 4 HOH 159 660 660 HOH HOH X . D 4 HOH 160 661 661 HOH HOH X . D 4 HOH 161 662 662 HOH HOH X . D 4 HOH 162 663 663 HOH HOH X . D 4 HOH 163 664 664 HOH HOH X . D 4 HOH 164 665 665 HOH HOH X . D 4 HOH 165 666 666 HOH HOH X . D 4 HOH 166 667 667 HOH HOH X . D 4 HOH 167 668 668 HOH HOH X . D 4 HOH 168 669 669 HOH HOH X . D 4 HOH 169 670 670 HOH HOH X . D 4 HOH 170 671 671 HOH HOH X . D 4 HOH 171 672 672 HOH HOH X . D 4 HOH 172 673 673 HOH HOH X . D 4 HOH 173 674 674 HOH HOH X . D 4 HOH 174 675 675 HOH HOH X . D 4 HOH 175 676 676 HOH HOH X . D 4 HOH 176 677 677 HOH HOH X . D 4 HOH 177 678 678 HOH HOH X . D 4 HOH 178 679 679 HOH HOH X . D 4 HOH 179 680 680 HOH HOH X . D 4 HOH 180 681 681 HOH HOH X . D 4 HOH 181 682 682 HOH HOH X . D 4 HOH 182 683 683 HOH HOH X . D 4 HOH 183 684 684 HOH HOH X . D 4 HOH 184 685 685 HOH HOH X . D 4 HOH 185 686 686 HOH HOH X . D 4 HOH 186 687 687 HOH HOH X . D 4 HOH 187 688 688 HOH HOH X . D 4 HOH 188 689 689 HOH HOH X . D 4 HOH 189 690 690 HOH HOH X . D 4 HOH 190 691 691 HOH HOH X . D 4 HOH 191 692 692 HOH HOH X . D 4 HOH 192 693 693 HOH HOH X . D 4 HOH 193 694 694 HOH HOH X . D 4 HOH 194 695 695 HOH HOH X . D 4 HOH 195 696 696 HOH HOH X . D 4 HOH 196 697 697 HOH HOH X . D 4 HOH 197 698 698 HOH HOH X . D 4 HOH 198 699 699 HOH HOH X . D 4 HOH 199 700 700 HOH HOH X . D 4 HOH 200 701 701 HOH HOH X . D 4 HOH 201 702 702 HOH HOH X . D 4 HOH 202 703 703 HOH HOH X . D 4 HOH 203 704 704 HOH HOH X . D 4 HOH 204 705 705 HOH HOH X . D 4 HOH 205 706 706 HOH HOH X . D 4 HOH 206 707 707 HOH HOH X . D 4 HOH 207 708 708 HOH HOH X . D 4 HOH 208 709 709 HOH HOH X . D 4 HOH 209 710 710 HOH HOH X . D 4 HOH 210 711 711 HOH HOH X . D 4 HOH 211 712 712 HOH HOH X . D 4 HOH 212 713 713 HOH HOH X . D 4 HOH 213 714 714 HOH HOH X . D 4 HOH 214 715 715 HOH HOH X . D 4 HOH 215 716 716 HOH HOH X . D 4 HOH 216 717 717 HOH HOH X . D 4 HOH 217 718 718 HOH HOH X . D 4 HOH 218 719 719 HOH HOH X . D 4 HOH 219 720 720 HOH HOH X . D 4 HOH 220 721 721 HOH HOH X . D 4 HOH 221 722 722 HOH HOH X . D 4 HOH 222 723 723 HOH HOH X . D 4 HOH 223 724 724 HOH HOH X . D 4 HOH 224 725 725 HOH HOH X . D 4 HOH 225 726 726 HOH HOH X . D 4 HOH 226 727 727 HOH HOH X . D 4 HOH 227 728 728 HOH HOH X . D 4 HOH 228 729 729 HOH HOH X . D 4 HOH 229 730 730 HOH HOH X . D 4 HOH 230 731 731 HOH HOH X . D 4 HOH 231 732 732 HOH HOH X . D 4 HOH 232 733 733 HOH HOH X . D 4 HOH 233 734 734 HOH HOH X . D 4 HOH 234 735 735 HOH HOH X . D 4 HOH 235 736 736 HOH HOH X . D 4 HOH 236 737 737 HOH HOH X . D 4 HOH 237 738 738 HOH HOH X . D 4 HOH 238 739 739 HOH HOH X . D 4 HOH 239 740 740 HOH HOH X . D 4 HOH 240 741 741 HOH HOH X . D 4 HOH 241 742 742 HOH HOH X . D 4 HOH 242 743 743 HOH HOH X . D 4 HOH 243 744 744 HOH HOH X . D 4 HOH 244 745 745 HOH HOH X . D 4 HOH 245 746 746 HOH HOH X . D 4 HOH 246 747 747 HOH HOH X . D 4 HOH 247 748 748 HOH HOH X . D 4 HOH 248 749 749 HOH HOH X . D 4 HOH 249 750 750 HOH HOH X . D 4 HOH 250 751 751 HOH HOH X . D 4 HOH 251 752 752 HOH HOH X . D 4 HOH 252 753 753 HOH HOH X . D 4 HOH 253 754 754 HOH HOH X . D 4 HOH 254 755 755 HOH HOH X . D 4 HOH 255 756 756 HOH HOH X . D 4 HOH 256 757 757 HOH HOH X . D 4 HOH 257 758 758 HOH HOH X . D 4 HOH 258 759 759 HOH HOH X . D 4 HOH 259 760 760 HOH HOH X . D 4 HOH 260 761 761 HOH HOH X . D 4 HOH 261 762 762 HOH HOH X . D 4 HOH 262 763 763 HOH HOH X . D 4 HOH 263 764 764 HOH HOH X . D 4 HOH 264 765 765 HOH HOH X . D 4 HOH 265 766 766 HOH HOH X . D 4 HOH 266 767 767 HOH HOH X . D 4 HOH 267 768 768 HOH HOH X . D 4 HOH 268 769 769 HOH HOH X . D 4 HOH 269 770 770 HOH HOH X . D 4 HOH 270 771 771 HOH HOH X . D 4 HOH 271 772 772 HOH HOH X . D 4 HOH 272 773 773 HOH HOH X . D 4 HOH 273 774 774 HOH HOH X . D 4 HOH 274 775 775 HOH HOH X . D 4 HOH 275 776 776 HOH HOH X . D 4 HOH 276 777 777 HOH HOH X . D 4 HOH 277 778 778 HOH HOH X . D 4 HOH 278 779 779 HOH HOH X . D 4 HOH 279 780 780 HOH HOH X . D 4 HOH 280 781 781 HOH HOH X . D 4 HOH 281 782 782 HOH HOH X . D 4 HOH 282 783 783 HOH HOH X . D 4 HOH 283 784 784 HOH HOH X . D 4 HOH 284 785 785 HOH HOH X . D 4 HOH 285 786 786 HOH HOH X . D 4 HOH 286 787 787 HOH HOH X . D 4 HOH 287 788 788 HOH HOH X . D 4 HOH 288 789 789 HOH HOH X . D 4 HOH 289 790 790 HOH HOH X . D 4 HOH 290 791 791 HOH HOH X . D 4 HOH 291 792 792 HOH HOH X . D 4 HOH 292 793 793 HOH HOH X . D 4 HOH 293 794 794 HOH HOH X . D 4 HOH 294 795 795 HOH HOH X . D 4 HOH 295 796 796 HOH HOH X . D 4 HOH 296 797 797 HOH HOH X . D 4 HOH 297 798 798 HOH HOH X . D 4 HOH 298 799 799 HOH HOH X . D 4 HOH 299 800 800 HOH HOH X . D 4 HOH 300 801 801 HOH HOH X . D 4 HOH 301 802 802 HOH HOH X . D 4 HOH 302 803 803 HOH HOH X . D 4 HOH 303 804 804 HOH HOH X . D 4 HOH 304 805 805 HOH HOH X . D 4 HOH 305 806 806 HOH HOH X . D 4 HOH 306 807 807 HOH HOH X . D 4 HOH 307 808 808 HOH HOH X . D 4 HOH 308 809 809 HOH HOH X . D 4 HOH 309 810 810 HOH HOH X . D 4 HOH 310 811 811 HOH HOH X . D 4 HOH 311 812 812 HOH HOH X . D 4 HOH 312 813 813 HOH HOH X . D 4 HOH 313 814 814 HOH HOH X . D 4 HOH 314 815 815 HOH HOH X . D 4 HOH 315 816 816 HOH HOH X . D 4 HOH 316 817 817 HOH HOH X . D 4 HOH 317 818 818 HOH HOH X . D 4 HOH 318 819 819 HOH HOH X . D 4 HOH 319 820 820 HOH HOH X . D 4 HOH 320 821 821 HOH HOH X . D 4 HOH 321 822 822 HOH HOH X . D 4 HOH 322 823 823 HOH HOH X . D 4 HOH 323 824 824 HOH HOH X . D 4 HOH 324 825 825 HOH HOH X . D 4 HOH 325 826 826 HOH HOH X . D 4 HOH 326 827 827 HOH HOH X . D 4 HOH 327 828 828 HOH HOH X . D 4 HOH 328 829 829 HOH HOH X . D 4 HOH 329 830 830 HOH HOH X . D 4 HOH 330 831 831 HOH HOH X . D 4 HOH 331 832 832 HOH HOH X . D 4 HOH 332 833 833 HOH HOH X . D 4 HOH 333 834 834 HOH HOH X . D 4 HOH 334 835 835 HOH HOH X . D 4 HOH 335 836 836 HOH HOH X . D 4 HOH 336 837 837 HOH HOH X . D 4 HOH 337 838 838 HOH HOH X . D 4 HOH 338 839 839 HOH HOH X . D 4 HOH 339 840 840 HOH HOH X . D 4 HOH 340 841 841 HOH HOH X . D 4 HOH 341 842 842 HOH HOH X . D 4 HOH 342 843 843 HOH HOH X . D 4 HOH 343 844 844 HOH HOH X . D 4 HOH 344 845 845 HOH HOH X . D 4 HOH 345 846 846 HOH HOH X . D 4 HOH 346 847 847 HOH HOH X . D 4 HOH 347 848 848 HOH HOH X . D 4 HOH 348 849 849 HOH HOH X . D 4 HOH 349 850 850 HOH HOH X . D 4 HOH 350 851 851 HOH HOH X . D 4 HOH 351 852 852 HOH HOH X . D 4 HOH 352 853 853 HOH HOH X . D 4 HOH 353 854 854 HOH HOH X . D 4 HOH 354 855 855 HOH HOH X . D 4 HOH 355 856 856 HOH HOH X . D 4 HOH 356 857 857 HOH HOH X . D 4 HOH 357 858 858 HOH HOH X . D 4 HOH 358 859 859 HOH HOH X . D 4 HOH 359 860 860 HOH HOH X . D 4 HOH 360 861 861 HOH HOH X . D 4 HOH 361 862 862 HOH HOH X . D 4 HOH 362 863 863 HOH HOH X . D 4 HOH 363 864 864 HOH HOH X . D 4 HOH 364 865 865 HOH HOH X . D 4 HOH 365 866 866 HOH HOH X . D 4 HOH 366 867 867 HOH HOH X . D 4 HOH 367 868 868 HOH HOH X . D 4 HOH 368 869 869 HOH HOH X . D 4 HOH 369 870 870 HOH HOH X . D 4 HOH 370 871 871 HOH HOH X . D 4 HOH 371 872 872 HOH HOH X . D 4 HOH 372 873 873 HOH HOH X . D 4 HOH 373 874 874 HOH HOH X . D 4 HOH 374 875 875 HOH HOH X . D 4 HOH 375 876 876 HOH HOH X . D 4 HOH 376 877 877 HOH HOH X . D 4 HOH 377 878 878 HOH HOH X . D 4 HOH 378 879 879 HOH HOH X . D 4 HOH 379 880 880 HOH HOH X . D 4 HOH 380 881 881 HOH HOH X . D 4 HOH 381 882 882 HOH HOH X . D 4 HOH 382 883 883 HOH HOH X . D 4 HOH 383 884 884 HOH HOH X . D 4 HOH 384 885 885 HOH HOH X . D 4 HOH 385 886 886 HOH HOH X . D 4 HOH 386 887 887 HOH HOH X . D 4 HOH 387 888 888 HOH HOH X . D 4 HOH 388 889 889 HOH HOH X . D 4 HOH 389 890 890 HOH HOH X . D 4 HOH 390 891 891 HOH HOH X . D 4 HOH 391 892 892 HOH HOH X . D 4 HOH 392 893 893 HOH HOH X . D 4 HOH 393 894 894 HOH HOH X . D 4 HOH 394 895 895 HOH HOH X . D 4 HOH 395 896 896 HOH HOH X . D 4 HOH 396 897 897 HOH HOH X . D 4 HOH 397 898 898 HOH HOH X . D 4 HOH 398 899 899 HOH HOH X . D 4 HOH 399 900 900 HOH HOH X . D 4 HOH 400 901 901 HOH HOH X . D 4 HOH 401 902 902 HOH HOH X . D 4 HOH 402 903 903 HOH HOH X . D 4 HOH 403 904 904 HOH HOH X . D 4 HOH 404 905 905 HOH HOH X . D 4 HOH 405 906 906 HOH HOH X . D 4 HOH 406 907 907 HOH HOH X . D 4 HOH 407 908 908 HOH HOH X . D 4 HOH 408 909 909 HOH HOH X . D 4 HOH 409 910 910 HOH HOH X . D 4 HOH 410 911 911 HOH HOH X . D 4 HOH 411 912 912 HOH HOH X . D 4 HOH 412 913 913 HOH HOH X . D 4 HOH 413 914 914 HOH HOH X . D 4 HOH 414 915 915 HOH HOH X . D 4 HOH 415 916 916 HOH HOH X . D 4 HOH 416 917 917 HOH HOH X . D 4 HOH 417 918 918 HOH HOH X . D 4 HOH 418 919 919 HOH HOH X . D 4 HOH 419 920 920 HOH HOH X . D 4 HOH 420 921 921 HOH HOH X . D 4 HOH 421 922 922 HOH HOH X . D 4 HOH 422 923 923 HOH HOH X . D 4 HOH 423 924 924 HOH HOH X . D 4 HOH 424 925 925 HOH HOH X . D 4 HOH 425 926 926 HOH HOH X . D 4 HOH 426 927 927 HOH HOH X . D 4 HOH 427 928 928 HOH HOH X . D 4 HOH 428 929 929 HOH HOH X . D 4 HOH 429 930 930 HOH HOH X . D 4 HOH 430 931 931 HOH HOH X . D 4 HOH 431 932 932 HOH HOH X . D 4 HOH 432 933 933 HOH HOH X . D 4 HOH 433 934 934 HOH HOH X . D 4 HOH 434 935 935 HOH HOH X . D 4 HOH 435 936 936 HOH HOH X . D 4 HOH 436 937 937 HOH HOH X . D 4 HOH 437 938 938 HOH HOH X . D 4 HOH 438 939 939 HOH HOH X . D 4 HOH 439 940 940 HOH HOH X . D 4 HOH 440 941 941 HOH HOH X . D 4 HOH 441 942 942 HOH HOH X . D 4 HOH 442 943 943 HOH HOH X . D 4 HOH 443 944 944 HOH HOH X . D 4 HOH 444 945 945 HOH HOH X . D 4 HOH 445 946 946 HOH HOH X . D 4 HOH 446 947 947 HOH HOH X . D 4 HOH 447 948 948 HOH HOH X . D 4 HOH 448 949 949 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 X HOH 515 ? D HOH . 2 1 X HOH 518 ? D HOH . 3 1 X HOH 661 ? D HOH . 4 1 X HOH 758 ? D HOH . 5 1 X HOH 774 ? D HOH . 6 1 X HOH 785 ? D HOH . 7 1 X HOH 874 ? D HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? X HOH 619 ? 1_555 NA ? B NA . ? X NA 501 ? 1_555 O ? D HOH . ? X HOH 789 ? 1_555 67.4 ? 2 O ? D HOH . ? X HOH 619 ? 1_555 NA ? B NA . ? X NA 501 ? 1_555 O B D HOH . ? X HOH 565 ? 1_555 62.8 ? 3 O ? D HOH . ? X HOH 789 ? 1_555 NA ? B NA . ? X NA 501 ? 1_555 O B D HOH . ? X HOH 565 ? 1_555 120.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-08-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 SHELX phasing . ? 3 # _pdbx_entry_details.entry_id 2ZK9 _pdbx_entry_details.sequence_details ;RESIDUE 21 GLU (UNP RESIDUE 156 GLN) IS SEEM TO BE DEAMIDATED BY THE ENZYME ITSELF. SELF-DEAMIDATION IS THE FEATURE OF THE PROTEIN GLUTAMINASE. THE CHANGE TO GLU WAS CONFIRMED BY PROTEIN-SEQUENCER. ; _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C X PHE 185 ? A O X PHE 185 ? A 1.443 1.229 0.214 0.019 N 2 1 C X PHE 185 ? B O X PHE 185 ? B 1.551 1.229 0.322 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA X CYS 32 ? B CB X CYS 32 ? B SG X CYS 32 ? B 121.09 114.20 6.89 1.10 N 2 1 NE X ARG 45 ? ? CZ X ARG 45 ? ? NH1 X ARG 45 ? ? 123.58 120.30 3.28 0.50 N 3 1 NE X ARG 50 ? ? CZ X ARG 50 ? ? NH1 X ARG 50 ? ? 123.45 120.30 3.15 0.50 N 4 1 NE X ARG 100 ? ? CZ X ARG 100 ? ? NH2 X ARG 100 ? ? 116.13 120.30 -4.17 0.50 N 5 1 CB X TYR 134 ? B CG X TYR 134 ? B CD2 X TYR 134 ? B 116.25 121.00 -4.75 0.60 N 6 1 CB X TYR 134 ? B CG X TYR 134 ? B CD1 X TYR 134 ? B 125.96 121.00 4.96 0.60 N 7 1 CA X PHE 185 ? B C X PHE 185 ? B O X PHE 185 ? B 98.44 120.10 -21.66 2.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR X 34 ? ? -82.84 47.36 2 1 ASP X 103 ? ? -154.63 85.01 3 1 ASN X 148 ? ? 73.54 31.19 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 GLYCEROL GOL 4 water HOH #