HEADER HYDROLASE 07-AUG-08 2ZQB TITLE CRYSTAL STRUCTURE OF A PSYCHROTROPHIC RNASEHI VARIANT WITH SEXTUPLE TITLE 2 THERMOSTABILIZING MUTATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE HI; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: RNASE HI; COMPND 5 EC: 3.1.26.4; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS; SOURCE 3 ORGANISM_TAXID: 70863; SOURCE 4 STRAIN: MR-1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: MIC2067(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET25B(+) KEYWDS HYDROLASE, CYTOPLASM, ENDONUCLEASE, MAGNESIUM, METAL-BINDING, KEYWDS 2 NUCLEASE EXPDTA X-RAY DIFFRACTION AUTHOR C.ANGKAWIDJAJA,S.KANAYA REVDAT 3 01-NOV-23 2ZQB 1 REMARK REVDAT 2 10-NOV-21 2ZQB 1 REMARK SEQADV REVDAT 1 23-JUN-09 2ZQB 0 JRNL AUTH M.S.ROHMAN,T.TADOKORO,C.ANGKAWIDJAJA,Y.ABE,H.MATSUMURA, JRNL AUTH 2 Y.KOGA,K.TAKANO,S.KANAYA JRNL TITL DESTABILIZATION OF PSYCHROTROPHIC RNASE HI IN A LOCALIZED JRNL TITL 2 FASHION AS REVEALED BY MUTATIONAL AND X-RAY CRYSTALLOGRAPHIC JRNL TITL 3 ANALYSES JRNL REF FEBS J. V. 276 603 2009 JRNL REFN ISSN 1742-464X JRNL PMID 19120449 JRNL DOI 10.1111/J.1742-4658.2008.06811.X REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22450 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1212 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1571 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4702 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.684 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.295 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.186 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.093 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4851 ; 0.030 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6566 ; 2.510 ; 1.934 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 594 ; 8.541 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 209 ;38.254 ;24.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 843 ;20.456 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;21.443 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 694 ; 0.178 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3638 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2363 ; 0.265 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3137 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 253 ; 0.190 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 75 ; 0.336 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.407 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3105 ; 1.601 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4734 ; 2.533 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2149 ; 3.551 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1832 ; 5.354 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZQB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000028291. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER DIP-6040 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23782 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.14600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 0.52500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2E4L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG, MME 5000, 0.1M MES, 0.2M REMARK 280 AMMONIUM SULFATE, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 136.40800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.11950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.11950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.20400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.11950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.11950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 204.61200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.11950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.11950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 68.20400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.11950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.11950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 204.61200 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 136.40800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY A 125 REMARK 465 HIS A 126 REMARK 465 ALA A 127 REMARK 465 GLN A 155 REMARK 465 ALA A 156 REMARK 465 GLU A 157 REMARK 465 SER A 158 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 3 REMARK 465 HIS B 126 REMARK 465 ALA B 127 REMARK 465 GLY B 128 REMARK 465 HIS B 129 REMARK 465 GLN B 155 REMARK 465 ALA B 156 REMARK 465 GLU B 157 REMARK 465 SER B 158 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 GLU C 3 REMARK 465 GLN C 155 REMARK 465 ALA C 156 REMARK 465 GLU C 157 REMARK 465 SER C 158 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 GLN D 155 REMARK 465 ALA D 156 REMARK 465 GLU D 157 REMARK 465 SER D 158 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 15 94.36 -164.12 REMARK 500 ASN A 18 81.29 -159.15 REMARK 500 LYS A 31 -121.04 45.14 REMARK 500 THR A 82 -62.31 -137.03 REMARK 500 HIS A 129 -5.59 -140.02 REMARK 500 ALA A 130 -4.46 84.68 REMARK 500 ALA A 145 34.14 -90.77 REMARK 500 GLN A 149 136.80 -39.86 REMARK 500 LYS B 31 -125.20 47.11 REMARK 500 THR B 82 -39.29 -132.22 REMARK 500 THR B 94 -172.59 -47.82 REMARK 500 LYS C 31 -130.34 53.16 REMARK 500 THR C 82 -67.06 -134.77 REMARK 500 ASN C 96 61.16 -115.17 REMARK 500 ALA C 127 129.10 -31.88 REMARK 500 ALA C 145 30.49 -99.55 REMARK 500 ASN D 18 102.03 -168.35 REMARK 500 LYS D 31 -127.34 53.47 REMARK 500 THR D 44 -167.55 -165.24 REMARK 500 THR D 82 -77.40 -121.04 REMARK 500 TRP D 83 -74.53 -19.35 REMARK 500 THR D 94 -167.82 -73.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 16 GLY A 17 -135.75 REMARK 500 GLY A 17 ASN A 18 -137.32 REMARK 500 ASN B 96 GLY B 97 145.25 REMARK 500 LYS B 124 GLY B 125 -138.62 REMARK 500 ASN C 96 GLY C 97 -126.54 REMARK 500 HIS C 126 ALA C 127 144.81 REMARK 500 ALA C 127 GLY C 128 -54.92 REMARK 500 GLY C 128 HIS C 129 86.01 REMARK 500 THR C 152 GLY C 153 67.95 REMARK 500 ALA D 127 GLY D 128 -38.32 REMARK 500 THR D 152 GLY D 153 -130.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 159 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E4L RELATED DB: PDB DBREF 2ZQB A 1 158 UNP Q8EE30 RNH_SHEON 1 158 DBREF 2ZQB B 1 158 UNP Q8EE30 RNH_SHEON 1 158 DBREF 2ZQB C 1 158 UNP Q8EE30 RNH_SHEON 1 158 DBREF 2ZQB D 1 158 UNP Q8EE30 RNH_SHEON 1 158 SEQADV 2ZQB LYS A 29 UNP Q8EE30 ASN 29 ENGINEERED MUTATION SEQADV 2ZQB GLY A 39 UNP Q8EE30 ASP 39 ENGINEERED MUTATION SEQADV 2ZQB VAL A 76 UNP Q8EE30 MET 76 ENGINEERED MUTATION SEQADV 2ZQB ASN A 90 UNP Q8EE30 LYS 90 ENGINEERED MUTATION SEQADV 2ZQB GLY A 97 UNP Q8EE30 ARG 97 ENGINEERED MUTATION SEQADV 2ZQB HIS A 136 UNP Q8EE30 ASP 136 ENGINEERED MUTATION SEQADV 2ZQB LYS B 29 UNP Q8EE30 ASN 29 ENGINEERED MUTATION SEQADV 2ZQB GLY B 39 UNP Q8EE30 ASP 39 ENGINEERED MUTATION SEQADV 2ZQB VAL B 76 UNP Q8EE30 MET 76 ENGINEERED MUTATION SEQADV 2ZQB ASN B 90 UNP Q8EE30 LYS 90 ENGINEERED MUTATION SEQADV 2ZQB GLY B 97 UNP Q8EE30 ARG 97 ENGINEERED MUTATION SEQADV 2ZQB HIS B 136 UNP Q8EE30 ASP 136 ENGINEERED MUTATION SEQADV 2ZQB LYS C 29 UNP Q8EE30 ASN 29 ENGINEERED MUTATION SEQADV 2ZQB GLY C 39 UNP Q8EE30 ASP 39 ENGINEERED MUTATION SEQADV 2ZQB VAL C 76 UNP Q8EE30 MET 76 ENGINEERED MUTATION SEQADV 2ZQB ASN C 90 UNP Q8EE30 LYS 90 ENGINEERED MUTATION SEQADV 2ZQB GLY C 97 UNP Q8EE30 ARG 97 ENGINEERED MUTATION SEQADV 2ZQB HIS C 136 UNP Q8EE30 ASP 136 ENGINEERED MUTATION SEQADV 2ZQB LYS D 29 UNP Q8EE30 ASN 29 ENGINEERED MUTATION SEQADV 2ZQB GLY D 39 UNP Q8EE30 ASP 39 ENGINEERED MUTATION SEQADV 2ZQB VAL D 76 UNP Q8EE30 MET 76 ENGINEERED MUTATION SEQADV 2ZQB ASN D 90 UNP Q8EE30 LYS 90 ENGINEERED MUTATION SEQADV 2ZQB GLY D 97 UNP Q8EE30 ARG 97 ENGINEERED MUTATION SEQADV 2ZQB HIS D 136 UNP Q8EE30 ASP 136 ENGINEERED MUTATION SEQRES 1 A 158 MET THR GLU LEU LYS LEU ILE HIS ILE PHE THR ASP GLY SEQRES 2 A 158 SER CYS LEU GLY ASN PRO GLY PRO GLY GLY TYR GLY ILE SEQRES 3 A 158 VAL MET LYS TYR LYS GLY HIS THR LYS GLU MET SER GLY SEQRES 4 A 158 GLY PHE SER LEU THR THR ASN ASN ARG MET GLU LEU LEU SEQRES 5 A 158 ALA PRO ILE VAL ALA LEU GLU ALA LEU LYS GLU PRO CYS SEQRES 6 A 158 LYS ILE ILE LEU THR SER ASP SER GLN TYR VAL ARG GLN SEQRES 7 A 158 GLY ILE MET THR TRP ILE HIS GLY TRP LYS LYS ASN GLY SEQRES 8 A 158 TRP MET THR SER ASN GLY THR PRO VAL LYS ASN VAL ASP SEQRES 9 A 158 LEU TRP LYS ARG LEU ASP LYS ALA ALA GLN LEU HIS GLN SEQRES 10 A 158 ILE ASP TRP ARG TRP VAL LYS GLY HIS ALA GLY HIS ALA SEQRES 11 A 158 GLU ASN GLU ARG CYS HIS GLN LEU ALA ARG ALA ALA ALA SEQRES 12 A 158 GLU ALA ASN PRO THR GLN ILE ASP THR GLY TYR GLN ALA SEQRES 13 A 158 GLU SER SEQRES 1 B 158 MET THR GLU LEU LYS LEU ILE HIS ILE PHE THR ASP GLY SEQRES 2 B 158 SER CYS LEU GLY ASN PRO GLY PRO GLY GLY TYR GLY ILE SEQRES 3 B 158 VAL MET LYS TYR LYS GLY HIS THR LYS GLU MET SER GLY SEQRES 4 B 158 GLY PHE SER LEU THR THR ASN ASN ARG MET GLU LEU LEU SEQRES 5 B 158 ALA PRO ILE VAL ALA LEU GLU ALA LEU LYS GLU PRO CYS SEQRES 6 B 158 LYS ILE ILE LEU THR SER ASP SER GLN TYR VAL ARG GLN SEQRES 7 B 158 GLY ILE MET THR TRP ILE HIS GLY TRP LYS LYS ASN GLY SEQRES 8 B 158 TRP MET THR SER ASN GLY THR PRO VAL LYS ASN VAL ASP SEQRES 9 B 158 LEU TRP LYS ARG LEU ASP LYS ALA ALA GLN LEU HIS GLN SEQRES 10 B 158 ILE ASP TRP ARG TRP VAL LYS GLY HIS ALA GLY HIS ALA SEQRES 11 B 158 GLU ASN GLU ARG CYS HIS GLN LEU ALA ARG ALA ALA ALA SEQRES 12 B 158 GLU ALA ASN PRO THR GLN ILE ASP THR GLY TYR GLN ALA SEQRES 13 B 158 GLU SER SEQRES 1 C 158 MET THR GLU LEU LYS LEU ILE HIS ILE PHE THR ASP GLY SEQRES 2 C 158 SER CYS LEU GLY ASN PRO GLY PRO GLY GLY TYR GLY ILE SEQRES 3 C 158 VAL MET LYS TYR LYS GLY HIS THR LYS GLU MET SER GLY SEQRES 4 C 158 GLY PHE SER LEU THR THR ASN ASN ARG MET GLU LEU LEU SEQRES 5 C 158 ALA PRO ILE VAL ALA LEU GLU ALA LEU LYS GLU PRO CYS SEQRES 6 C 158 LYS ILE ILE LEU THR SER ASP SER GLN TYR VAL ARG GLN SEQRES 7 C 158 GLY ILE MET THR TRP ILE HIS GLY TRP LYS LYS ASN GLY SEQRES 8 C 158 TRP MET THR SER ASN GLY THR PRO VAL LYS ASN VAL ASP SEQRES 9 C 158 LEU TRP LYS ARG LEU ASP LYS ALA ALA GLN LEU HIS GLN SEQRES 10 C 158 ILE ASP TRP ARG TRP VAL LYS GLY HIS ALA GLY HIS ALA SEQRES 11 C 158 GLU ASN GLU ARG CYS HIS GLN LEU ALA ARG ALA ALA ALA SEQRES 12 C 158 GLU ALA ASN PRO THR GLN ILE ASP THR GLY TYR GLN ALA SEQRES 13 C 158 GLU SER SEQRES 1 D 158 MET THR GLU LEU LYS LEU ILE HIS ILE PHE THR ASP GLY SEQRES 2 D 158 SER CYS LEU GLY ASN PRO GLY PRO GLY GLY TYR GLY ILE SEQRES 3 D 158 VAL MET LYS TYR LYS GLY HIS THR LYS GLU MET SER GLY SEQRES 4 D 158 GLY PHE SER LEU THR THR ASN ASN ARG MET GLU LEU LEU SEQRES 5 D 158 ALA PRO ILE VAL ALA LEU GLU ALA LEU LYS GLU PRO CYS SEQRES 6 D 158 LYS ILE ILE LEU THR SER ASP SER GLN TYR VAL ARG GLN SEQRES 7 D 158 GLY ILE MET THR TRP ILE HIS GLY TRP LYS LYS ASN GLY SEQRES 8 D 158 TRP MET THR SER ASN GLY THR PRO VAL LYS ASN VAL ASP SEQRES 9 D 158 LEU TRP LYS ARG LEU ASP LYS ALA ALA GLN LEU HIS GLN SEQRES 10 D 158 ILE ASP TRP ARG TRP VAL LYS GLY HIS ALA GLY HIS ALA SEQRES 11 D 158 GLU ASN GLU ARG CYS HIS GLN LEU ALA ARG ALA ALA ALA SEQRES 12 D 158 GLU ALA ASN PRO THR GLN ILE ASP THR GLY TYR GLN ALA SEQRES 13 D 158 GLU SER HET SO4 A 159 5 HET SO4 B 159 5 HET SO4 C 159 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 3(O4 S 2-) FORMUL 8 HOH *224(H2 O) HELIX 1 1 THR A 45 ALA A 60 1 16 HELIX 2 2 SER A 73 THR A 82 1 10 HELIX 3 3 THR A 82 LYS A 89 1 8 HELIX 4 4 ASN A 102 GLN A 114 1 13 HELIX 5 5 GLU A 131 ALA A 145 1 15 HELIX 6 6 THR B 45 ALA B 60 1 16 HELIX 7 7 SER B 73 THR B 82 1 10 HELIX 8 8 THR B 82 ASN B 90 1 9 HELIX 9 9 ASN B 102 LEU B 115 1 14 HELIX 10 10 ALA B 130 ALA B 145 1 16 HELIX 11 11 THR C 45 LEU C 61 1 17 HELIX 12 12 SER C 73 THR C 82 1 10 HELIX 13 13 THR C 82 LYS C 89 1 8 HELIX 14 14 ASN C 102 HIS C 116 1 15 HELIX 15 15 HIS C 129 GLU C 144 1 16 HELIX 16 16 THR D 45 ALA D 60 1 16 HELIX 17 17 SER D 73 THR D 82 1 10 HELIX 18 18 THR D 82 ASN D 90 1 9 HELIX 19 19 ASN D 102 GLN D 114 1 13 HELIX 20 20 HIS D 129 GLU D 144 1 16 SHEET 1 A10 GLN A 117 TRP A 122 0 SHEET 2 A10 CYS A 65 SER A 71 1 N LEU A 69 O ARG A 121 SHEET 3 A10 LYS A 5 SER A 14 1 N ILE A 9 O THR A 70 SHEET 4 A10 GLY A 20 TYR A 30 -1 O VAL A 27 N PHE A 10 SHEET 5 A10 HIS A 33 THR A 44 -1 O PHE A 41 N GLY A 22 SHEET 6 A10 HIS B 33 THR B 44 -1 O SER B 38 N GLU A 36 SHEET 7 A10 GLY B 20 TYR B 30 -1 N GLY B 22 O PHE B 41 SHEET 8 A10 LEU B 6 CYS B 15 -1 N PHE B 10 O VAL B 27 SHEET 9 A10 LYS B 66 SER B 71 1 O ILE B 68 N ILE B 9 SHEET 10 A10 GLN B 117 TRP B 122 1 O ASP B 119 N LEU B 69 SHEET 1 B10 GLN C 117 TRP C 122 0 SHEET 2 B10 CYS C 65 SER C 71 1 N LEU C 69 O ARG C 121 SHEET 3 B10 LYS C 5 SER C 14 1 N ILE C 7 O LYS C 66 SHEET 4 B10 GLY C 20 TYR C 30 -1 O LYS C 29 N HIS C 8 SHEET 5 B10 HIS C 33 THR C 44 -1 O LYS C 35 N MET C 28 SHEET 6 B10 HIS D 33 THR D 44 -1 O GLU D 36 N SER C 38 SHEET 7 B10 GLY D 20 TYR D 30 -1 N GLY D 22 O PHE D 41 SHEET 8 B10 LEU D 6 CYS D 15 -1 N SER D 14 O GLY D 23 SHEET 9 B10 LYS D 66 SER D 71 1 O LYS D 66 N ILE D 7 SHEET 10 B10 GLN D 117 TRP D 122 1 O ASP D 119 N ILE D 67 CISPEP 1 ASN A 18 PRO A 19 0 18.59 CISPEP 2 ASN B 18 PRO B 19 0 8.05 CISPEP 3 ASN C 18 PRO C 19 0 12.95 CISPEP 4 ASN D 18 PRO D 19 0 3.77 CISPEP 5 GLY D 153 TYR D 154 0 2.90 SITE 1 AC1 6 THR A 45 ASN A 47 LYS A 101 ASN A 102 SITE 2 AC1 6 HOH A 215 ASN C 96 SITE 1 AC2 5 THR B 45 ASN B 47 LYS B 101 ASN B 102 SITE 2 AC2 5 HOH B 167 SITE 1 AC3 6 SER B 95 THR C 45 ASN C 47 LYS C 101 SITE 2 AC3 6 ASN C 102 HOH C 174 CRYST1 68.239 68.239 272.816 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014654 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014654 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003665 0.00000