HEADER DNA BINDING PROTEIN, RECOMBINATION 01-OCT-08 2ZTD TITLE MTRUVA FORM III COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOLLIDAY JUNCTION ATP-DEPENDENT DNA HELICASE RUVA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.6.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RUVA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMTRA KEYWDS RECOMBINATION, BRANCH MIGRATION, HOLLIDAY JUNCTION, DNA BINDING, KEYWDS 2 OLIGOMERIZATION, ACIDIC PIN, DNA BINDING PROTEIN, ATP-BINDING, DNA KEYWDS 3 DAMAGE, DNA RECOMBINATION, DNA REPAIR, DNA-BINDING, HELICASE, KEYWDS 4 HYDROLASE, NUCLEOTIDE-BINDING, SOS RESPONSE EXPDTA X-RAY DIFFRACTION AUTHOR J.R.PRABU,S.THAMOTHARAN,J.S.KHANDUJA,N.R.CHANDRA,K.MUNIYAPPA, AUTHOR 2 M.VIJAYAN REVDAT 4 01-NOV-23 2ZTD 1 REMARK SEQADV REVDAT 3 13-JUL-11 2ZTD 1 VERSN REVDAT 2 02-JUN-09 2ZTD 1 JRNL REVDAT 1 05-MAY-09 2ZTD 0 JRNL AUTH J.R.PRABU,S.THAMOTHARAN,J.S.KHANDUJA,N.R.CHANDRA, JRNL AUTH 2 K.MUNIYAPPA,M.VIJAYAN JRNL TITL CRYSTALLOGRAPHIC AND MODELLING STUDIES ON MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS RUVA ADDITIONAL ROLE OF RUVB-BINDING DOMAIN AND JRNL TITL 3 INTER SPECIES VARIABILITY JRNL REF BIOCHIM.BIOPHYS.ACTA V.1794 1001 2009 JRNL REFN ISSN 0006-3002 JRNL PMID 19374958 JRNL DOI 10.1016/J.BBAPAP.2009.04.003 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 15210 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.5000 - 2.4000 0.96 0 131 0.2467 0.3327 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.39320 REMARK 3 B22 (A**2) : -3.04060 REMARK 3 B33 (A**2) : -1.35260 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 NULL REMARK 3 ANGLE : 1.108 NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : 13.897 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A 1-63 REMARK 3 ORIGIN FOR THE GROUP (A): -25.7064 2.3526 13.8610 REMARK 3 T TENSOR REMARK 3 T11: 0.0097 T22: 0.0219 REMARK 3 T33: -0.0148 T12: -0.0080 REMARK 3 T13: 0.0736 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.5343 L22: 0.6323 REMARK 3 L33: 0.2551 L12: 0.1382 REMARK 3 L13: -0.4129 L23: -0.2323 REMARK 3 S TENSOR REMARK 3 S11: 0.0565 S12: -0.2180 S13: -0.0067 REMARK 3 S21: 0.1469 S22: -0.1373 S23: -0.2536 REMARK 3 S31: -0.1329 S32: 0.1358 S33: -0.1605 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A 65-131 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5043 15.5007 23.2457 REMARK 3 T TENSOR REMARK 3 T11: 0.1822 T22: 0.2108 REMARK 3 T33: 0.1885 T12: -0.0909 REMARK 3 T13: 0.0582 T23: -0.0360 REMARK 3 L TENSOR REMARK 3 L11: 0.0586 L22: 0.0190 REMARK 3 L33: 0.0448 L12: 0.0039 REMARK 3 L13: 0.0112 L23: 0.0092 REMARK 3 S TENSOR REMARK 3 S11: 0.1702 S12: -0.0748 S13: 0.2174 REMARK 3 S21: 0.0414 S22: -0.1756 S23: 0.0775 REMARK 3 S31: -0.1437 S32: 0.1744 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A 147-194 REMARK 3 ORIGIN FOR THE GROUP (A): -19.7168 36.1487 0.1763 REMARK 3 T TENSOR REMARK 3 T11: 0.2290 T22: 0.1308 REMARK 3 T33: 0.1796 T12: 0.0165 REMARK 3 T13: 0.0885 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.0246 L22: 0.0395 REMARK 3 L33: -0.0002 L12: 0.0101 REMARK 3 L13: -0.0127 L23: 0.0136 REMARK 3 S TENSOR REMARK 3 S11: 0.1278 S12: 0.0263 S13: 0.2832 REMARK 3 S21: 0.0161 S22: -0.2320 S23: 0.0767 REMARK 3 S31: 0.0473 S32: 0.2134 S33: -0.0006 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B 1-63 REMARK 3 ORIGIN FOR THE GROUP (A): -18.6514 33.5980 47.2804 REMARK 3 T TENSOR REMARK 3 T11: -0.1577 T22: -0.1651 REMARK 3 T33: 0.0840 T12: 0.2348 REMARK 3 T13: -0.0698 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.0593 L22: 0.1565 REMARK 3 L33: 0.3098 L12: -0.0737 REMARK 3 L13: 0.0373 L23: -0.0517 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: -0.0285 S13: 0.0101 REMARK 3 S21: -0.2690 S22: 0.0773 S23: -0.0276 REMARK 3 S31: 0.0799 S32: -0.2463 S33: 0.1473 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B 65-131 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8697 24.3451 34.0562 REMARK 3 T TENSOR REMARK 3 T11: 0.1031 T22: 0.2248 REMARK 3 T33: 0.1853 T12: 0.0343 REMARK 3 T13: -0.0567 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 0.0965 L22: 0.0387 REMARK 3 L33: 0.0584 L12: 0.0307 REMARK 3 L13: 0.0130 L23: 0.0005 REMARK 3 S TENSOR REMARK 3 S11: 0.1611 S12: 0.3469 S13: -0.3758 REMARK 3 S21: -0.2080 S22: 0.0957 S23: 0.0187 REMARK 3 S31: -0.0571 S32: -0.0347 S33: 0.0008 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B 147-194 REMARK 3 ORIGIN FOR THE GROUP (A): -24.7363 47.8187 13.4515 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.2266 REMARK 3 T33: 0.1410 T12: 0.0449 REMARK 3 T13: 0.0487 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 0.0025 L22: 0.0314 REMARK 3 L33: 0.0436 L12: -0.0442 REMARK 3 L13: -0.0181 L23: 0.0085 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: 0.1562 S13: -0.1208 REMARK 3 S21: -0.0368 S22: 0.0839 S23: 0.0681 REMARK 3 S31: 0.0599 S32: 0.0972 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A 1-131, 147-194 REMARK 3 SELECTION : CHAIN B 1-131, 147-194 REMARK 3 ATOM PAIRS NUMBER : 1316 REMARK 3 RMSD : 0.063 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZTD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1000028400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : OSMIC MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15211 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 2H5X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZED IN THE PRESENCE OF REMARK 280 EQUIMOLAR HOLLIDAY JUNCTION USING 0.1M SODIUM SUCCINATE, PH5.0, REMARK 280 1.4M AMMONIUM SULFATE, PH8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.33500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.41500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.60500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.33500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.41500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.60500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.33500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.41500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.60500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.33500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.41500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 49.60500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 61720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -187.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 511 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 ALA A -14 REMARK 465 SER A -13 REMARK 465 MET A -12 REMARK 465 THR A -11 REMARK 465 GLY A -10 REMARK 465 GLY A -9 REMARK 465 GLN A -8 REMARK 465 GLN A -7 REMARK 465 VAL A 133 REMARK 465 ALA A 134 REMARK 465 ALA A 135 REMARK 465 THR A 136 REMARK 465 GLY A 137 REMARK 465 GLY A 138 REMARK 465 ALA A 139 REMARK 465 LEU A 140 REMARK 465 SER A 141 REMARK 465 THR A 142 REMARK 465 ASN A 143 REMARK 465 GLY A 144 REMARK 465 HIS A 145 REMARK 465 ARG A 196 REMARK 465 MET B -15 REMARK 465 ALA B -14 REMARK 465 SER B -13 REMARK 465 MET B -12 REMARK 465 THR B -11 REMARK 465 GLY B -10 REMARK 465 GLY B -9 REMARK 465 GLN B -8 REMARK 465 GLN B -7 REMARK 465 MET B -6 REMARK 465 GLY B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 GLY B 132 REMARK 465 VAL B 133 REMARK 465 ALA B 134 REMARK 465 ALA B 135 REMARK 465 THR B 136 REMARK 465 GLY B 137 REMARK 465 GLY B 138 REMARK 465 ALA B 139 REMARK 465 LEU B 140 REMARK 465 SER B 141 REMARK 465 THR B 142 REMARK 465 ASN B 143 REMARK 465 GLY B 144 REMARK 465 HIS B 145 REMARK 465 ALA B 146 REMARK 465 ALA B 195 REMARK 465 ARG B 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A -6 CG SD CE REMARK 470 ARG A -4 CG CD NE CZ NH1 NH2 REMARK 470 GLU A -1 CG CD OE1 OE2 REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 ASP A 129 CG OD1 OD2 REMARK 470 ASP A 178 CG OD1 OD2 REMARK 470 SER B -2 OG REMARK 470 GLU B -1 CG CD OE1 OE2 REMARK 470 LYS B 117 CG CD CE NZ REMARK 470 ASP B 129 CG OD1 OD2 REMARK 470 ASP B 178 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A -2 -135.34 61.54 REMARK 500 VAL A 147 -57.86 76.61 REMARK 500 LYS A 194 -4.52 65.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2H5X RELATED DB: PDB REMARK 900 MTRUVA FORM I REMARK 900 RELATED ID: 2ZTC RELATED DB: PDB REMARK 900 MTRUVA FORM II REMARK 900 RELATED ID: 2ZTE RELATED DB: PDB REMARK 900 MTRUVA FORM IV DBREF 2ZTD A 1 196 UNP P66744 RUVA_MYCTU 1 196 DBREF 2ZTD B 1 196 UNP P66744 RUVA_MYCTU 1 196 SEQADV 2ZTD MET A -15 UNP P66744 EXPRESSION TAG SEQADV 2ZTD ALA A -14 UNP P66744 EXPRESSION TAG SEQADV 2ZTD SER A -13 UNP P66744 EXPRESSION TAG SEQADV 2ZTD MET A -12 UNP P66744 EXPRESSION TAG SEQADV 2ZTD THR A -11 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY A -10 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY A -9 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLN A -8 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLN A -7 UNP P66744 EXPRESSION TAG SEQADV 2ZTD MET A -6 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY A -5 UNP P66744 EXPRESSION TAG SEQADV 2ZTD ARG A -4 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY A -3 UNP P66744 EXPRESSION TAG SEQADV 2ZTD SER A -2 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLU A -1 UNP P66744 EXPRESSION TAG SEQADV 2ZTD PHE A 0 UNP P66744 EXPRESSION TAG SEQADV 2ZTD MET B -15 UNP P66744 EXPRESSION TAG SEQADV 2ZTD ALA B -14 UNP P66744 EXPRESSION TAG SEQADV 2ZTD SER B -13 UNP P66744 EXPRESSION TAG SEQADV 2ZTD MET B -12 UNP P66744 EXPRESSION TAG SEQADV 2ZTD THR B -11 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY B -10 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY B -9 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLN B -8 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLN B -7 UNP P66744 EXPRESSION TAG SEQADV 2ZTD MET B -6 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY B -5 UNP P66744 EXPRESSION TAG SEQADV 2ZTD ARG B -4 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLY B -3 UNP P66744 EXPRESSION TAG SEQADV 2ZTD SER B -2 UNP P66744 EXPRESSION TAG SEQADV 2ZTD GLU B -1 UNP P66744 EXPRESSION TAG SEQADV 2ZTD PHE B 0 UNP P66744 EXPRESSION TAG SEQRES 1 A 212 MET ALA SER MET THR GLY GLY GLN GLN MET GLY ARG GLY SEQRES 2 A 212 SER GLU PHE MET ILE ALA SER VAL ARG GLY GLU VAL LEU SEQRES 3 A 212 GLU VAL ALA LEU ASP HIS VAL VAL ILE GLU ALA ALA GLY SEQRES 4 A 212 VAL GLY TYR ARG VAL ASN ALA THR PRO ALA THR LEU ALA SEQRES 5 A 212 THR LEU ARG GLN GLY THR GLU ALA ARG LEU ILE THR ALA SEQRES 6 A 212 MET ILE VAL ARG GLU ASP SER MET THR LEU TYR GLY PHE SEQRES 7 A 212 PRO ASP GLY GLU THR ARG ASP LEU PHE LEU THR LEU LEU SEQRES 8 A 212 SER VAL SER GLY VAL GLY PRO ARG LEU ALA MET ALA ALA SEQRES 9 A 212 LEU ALA VAL HIS ASP ALA PRO ALA LEU ARG GLN VAL LEU SEQRES 10 A 212 ALA ASP GLY ASN VAL ALA ALA LEU THR ARG VAL PRO GLY SEQRES 11 A 212 ILE GLY LYS ARG GLY ALA GLU ARG MET VAL LEU GLU LEU SEQRES 12 A 212 ARG ASP LYS VAL GLY VAL ALA ALA THR GLY GLY ALA LEU SEQRES 13 A 212 SER THR ASN GLY HIS ALA VAL ARG SER PRO VAL VAL GLU SEQRES 14 A 212 ALA LEU VAL GLY LEU GLY PHE ALA ALA LYS GLN ALA GLU SEQRES 15 A 212 GLU ALA THR ASP THR VAL LEU ALA ALA ASN HIS ASP ALA SEQRES 16 A 212 THR THR SER SER ALA LEU ARG SER ALA LEU SER LEU LEU SEQRES 17 A 212 GLY LYS ALA ARG SEQRES 1 B 212 MET ALA SER MET THR GLY GLY GLN GLN MET GLY ARG GLY SEQRES 2 B 212 SER GLU PHE MET ILE ALA SER VAL ARG GLY GLU VAL LEU SEQRES 3 B 212 GLU VAL ALA LEU ASP HIS VAL VAL ILE GLU ALA ALA GLY SEQRES 4 B 212 VAL GLY TYR ARG VAL ASN ALA THR PRO ALA THR LEU ALA SEQRES 5 B 212 THR LEU ARG GLN GLY THR GLU ALA ARG LEU ILE THR ALA SEQRES 6 B 212 MET ILE VAL ARG GLU ASP SER MET THR LEU TYR GLY PHE SEQRES 7 B 212 PRO ASP GLY GLU THR ARG ASP LEU PHE LEU THR LEU LEU SEQRES 8 B 212 SER VAL SER GLY VAL GLY PRO ARG LEU ALA MET ALA ALA SEQRES 9 B 212 LEU ALA VAL HIS ASP ALA PRO ALA LEU ARG GLN VAL LEU SEQRES 10 B 212 ALA ASP GLY ASN VAL ALA ALA LEU THR ARG VAL PRO GLY SEQRES 11 B 212 ILE GLY LYS ARG GLY ALA GLU ARG MET VAL LEU GLU LEU SEQRES 12 B 212 ARG ASP LYS VAL GLY VAL ALA ALA THR GLY GLY ALA LEU SEQRES 13 B 212 SER THR ASN GLY HIS ALA VAL ARG SER PRO VAL VAL GLU SEQRES 14 B 212 ALA LEU VAL GLY LEU GLY PHE ALA ALA LYS GLN ALA GLU SEQRES 15 B 212 GLU ALA THR ASP THR VAL LEU ALA ALA ASN HIS ASP ALA SEQRES 16 B 212 THR THR SER SER ALA LEU ARG SER ALA LEU SER LEU LEU SEQRES 17 B 212 GLY LYS ALA ARG HET GOL A 502 6 HET GOL A 504 6 HET GOL B 501 6 HET GOL B 503 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *113(H2 O) HELIX 1 1 THR A 31 ALA A 36 1 6 HELIX 2 2 ASP A 64 SER A 76 1 13 HELIX 3 3 GLY A 81 HIS A 92 1 12 HELIX 4 4 ASP A 93 ASP A 103 1 11 HELIX 5 5 ASN A 105 ARG A 111 1 7 HELIX 6 6 GLY A 116 ARG A 128 1 13 HELIX 7 7 VAL A 147 LEU A 158 1 12 HELIX 8 8 ALA A 161 ASN A 176 1 16 HELIX 9 9 THR A 180 GLY A 193 1 14 HELIX 10 10 THR B 31 ALA B 36 1 6 HELIX 11 11 ASP B 64 SER B 76 1 13 HELIX 12 12 GLY B 81 HIS B 92 1 12 HELIX 13 13 ASP B 93 ASP B 103 1 11 HELIX 14 14 ASN B 105 ARG B 111 1 7 HELIX 15 15 GLY B 116 ARG B 128 1 13 HELIX 16 16 VAL B 147 LEU B 158 1 12 HELIX 17 17 ALA B 161 ASN B 176 1 16 HELIX 18 18 THR B 180 GLY B 193 1 14 SHEET 1 A12 VAL A 24 ASN A 29 0 SHEET 2 A12 HIS A 16 ALA A 21 -1 N ALA A 21 O VAL A 24 SHEET 3 A12 SER A 4 VAL A 12 -1 N LEU A 10 O VAL A 18 SHEET 4 A12 GLU A 43 ARG A 53 -1 O ALA A 44 N GLY A 7 SHEET 5 A12 SER A 56 PHE A 62 -1 O THR A 58 N ILE A 51 SHEET 6 A12 VAL A 24 ASN A 29 1 N ASN A 29 O GLY A 61 SHEET 7 A12 ILE B 2 VAL B 12 -1 O ALA B 3 N GLY A 25 SHEET 8 A12 GLU B 43 ARG B 53 -1 O ALA B 44 N GLY B 7 SHEET 9 A12 SER B 56 PHE B 62 -1 O THR B 58 N ILE B 51 SHEET 10 A12 VAL B 24 ASN B 29 1 N ASN B 29 O GLY B 61 SHEET 11 A12 HIS B 16 ALA B 21 -1 N ALA B 21 O VAL B 24 SHEET 12 A12 ILE B 2 VAL B 12 -1 N LEU B 10 O VAL B 18 SITE 1 AC1 4 GLY A 81 PRO A 82 ARG A 83 LEU A 84 SITE 1 AC2 2 ARG A 53 HOH A 565 SITE 1 AC3 4 GLY B 81 PRO B 82 ARG B 83 LEU B 84 SITE 1 AC4 3 ALA B 161 ALA B 162 LYS B 163 CRYST1 88.670 94.830 99.210 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011278 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010545 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010080 0.00000