HEADER LIGASE 01-OCT-08 2ZTG TITLE CRYSTAL STRUCTURE OF ARCHAEOGLOBUS FULGIDUS ALANYL-TRNA TITLE 2 SYNTHETASE LACKING THE C-TERMINAL DIMERIZATION DOMAIN IN TITLE 3 COMPLEX WITH ALA-SA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALARS-DELTAC; COMPND 5 SYNONYM: ALANINE-TRNA LIGASE, ALARS; COMPND 6 EC: 6.1.1.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 GENE: AF_2255, ALAS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS CLASS-II AMINOACYL-TRNA SYNTHETASE, AMINOACYL-TRNA KEYWDS 2 SYNTHETASE, ATP-BINDING, CYTOPLASM, LIGASE, NUCLEOTIDE- KEYWDS 3 BINDING, PROTEIN BIOSYNTHESIS, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 4 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 5 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 6 RSGI EXPDTA X-RAY DIFFRACTION AUTHOR M.NAGANUMA,S.SEKINE,R.FUKUNAGA,S.YOKOYAMA REVDAT 1 30-JUN-09 2ZTG 0 JRNL AUTH M.NAGANUMA,S.SEKINE,R.FUKUNAGA,S.YOKOYAMA JRNL TITL UNIQUE PROTEIN ARCHITECTURE OF ALANYL-TRNA JRNL TITL 2 SYNTHETASE FOR AMINOACYLATION, EDITING, AND JRNL TITL 3 DIMERIZATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 8489 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19423669 JRNL DOI 10.1073/PNAS.0901572106 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2992116.160 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 37067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1856 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3338 REMARK 3 BIN R VALUE (WORKING SET) : 0.3860 REMARK 3 BIN FREE R VALUE : 0.4120 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 174 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.031 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5894 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 152 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.61000 REMARK 3 B22 (A**2) : 9.43000 REMARK 3 B33 (A**2) : -5.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM SIGMAA (A) : 0.46 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.51 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.89 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.570 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.470 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.590 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 69.79 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ALASA.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ALASA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZTG COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-OCT-08. REMARK 100 THE RCSB ID CODE IS RCSB028403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97888, 0.97936 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : 0.09900 REMARK 200 FOR THE DATA SET : 24.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50900 REMARK 200 R SYM FOR SHELL (I) : 0.50900 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG-MME 2000, 5MM MGCL2, 0.25MM REMARK 280 ALASA, 100MM BIS-TRIS, 0.1MM ZINC ACETATE, PH 7.2, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 80.19550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.54100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 80.19550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.54100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1108 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 22 89.47 -170.38 REMARK 500 PRO A 24 -79.34 -53.32 REMARK 500 CYS A 26 -10.69 103.01 REMARK 500 ILE A 39 12.72 -171.20 REMARK 500 ASP A 42 -70.28 -141.84 REMARK 500 PRO A 44 -73.46 -69.29 REMARK 500 ASN A 53 80.81 -150.60 REMARK 500 TRP A 162 -145.68 -121.68 REMARK 500 GLU A 223 31.33 -79.07 REMARK 500 PHE A 265 58.07 -154.03 REMARK 500 ARG A 282 41.33 -79.42 REMARK 500 GLU A 283 -24.85 -146.74 REMARK 500 ARG A 308 -80.54 -56.19 REMARK 500 VAL A 322 -174.93 -65.88 REMARK 500 LYS A 438 -2.93 58.17 REMARK 500 HIS A 484 44.39 -142.68 REMARK 500 GLU A 492 90.31 -69.07 REMARK 500 LYS A 494 144.93 -27.58 REMARK 500 ALA A 503 124.51 -36.79 REMARK 500 GLU A 539 100.83 -54.08 REMARK 500 SER A 540 -168.68 -165.65 REMARK 500 ALA A 552 -167.54 -169.25 REMARK 500 LEU A 563 -163.64 -114.93 REMARK 500 ALA A 576 95.35 -57.86 REMARK 500 ARG A 624 88.05 -69.32 REMARK 500 LYS A 625 137.25 -29.67 REMARK 500 GLU A 626 103.14 168.96 REMARK 500 GLU A 665 144.55 -171.74 REMARK 500 GLU A 738 -161.27 -170.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 CYS A 23 24.3 L L OUTSIDE RANGE REMARK 500 LYS A 625 23.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1019 DISTANCE = 5.51 ANGSTROMS REMARK 525 HOH A1069 DISTANCE = 5.75 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 452 NE2 REMARK 620 2 HOH A1055 O 99.5 REMARK 620 3 HOH A1144 O 117.9 100.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 902 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 604 NE2 REMARK 620 2 CYS A 703 SG 120.5 REMARK 620 3 HIS A 707 NE2 96.8 128.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A5A A 801 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 901 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 902 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AR_001000589.1 RELATED DB: TARGETDB DBREF 2ZTG A 1 739 UNP O28029 SYA_ARCFU 1 739 SEQRES 1 A 739 MSE THR LEU ASP GLU GLU TYR LEU ASP ILE THR PHE LEU SEQRES 2 A 739 THR GLU ASN GLY PHE VAL ARG LYS ARG CYS PRO LYS CYS SEQRES 3 A 739 GLY LYS HIS PHE TRP THR ALA ASP PRO GLU ARG GLU ILE SEQRES 4 A 739 CYS GLY ASP PRO PRO CYS GLU SER TYR SER PHE ILE GLY SEQRES 5 A 739 ASN PRO VAL PHE LYS LYS PRO PHE GLU LEU ASP GLU MSE SEQRES 6 A 739 ARG GLU TYR TYR LEU ASN PHE PHE GLU ARG ARG GLY HIS SEQRES 7 A 739 GLY ARG ILE GLU ARG TYR PRO VAL VAL ALA ARG TRP ARG SEQRES 8 A 739 THR ASP ILE TYR LEU THR ILE ALA SER ILE ALA ASP PHE SEQRES 9 A 739 GLN PRO PHE VAL THR SER GLY VAL ALA PRO PRO PRO ALA SEQRES 10 A 739 ASN PRO LEU THR ILE SER GLN PRO CYS ILE ARG LEU ASP SEQRES 11 A 739 ASP LEU ASP SER VAL GLY ARG THR GLY ARG HIS LEU THR SEQRES 12 A 739 LEU PHE GLU MSE MSE ALA HIS HIS ALA PHE ASN TYR PRO SEQRES 13 A 739 GLY LYS GLU ILE TYR TRP LYS ASN GLU THR VAL ALA TYR SEQRES 14 A 739 CYS THR GLU LEU LEU ASN GLU LEU GLY VAL LYS LYS GLU SEQRES 15 A 739 ASP ILE VAL TYR LYS GLU GLU PRO TRP ALA GLY GLY GLY SEQRES 16 A 739 ASN ALA GLY PRO CYS LEU GLU ALA ILE VAL GLY GLY LEU SEQRES 17 A 739 GLU VAL ALA THR LEU VAL PHE MSE ASN LEU GLU GLU HIS SEQRES 18 A 739 PRO GLU GLY ASP ILE GLU ILE LYS GLY ALA ARG TYR ARG SEQRES 19 A 739 LYS MSE ASP ASN TYR ILE VAL ASP THR GLY TYR GLY LEU SEQRES 20 A 739 GLU ARG PHE VAL TRP ALA SER LYS GLY THR PRO THR VAL SEQRES 21 A 739 TYR ASP ALA ILE PHE PRO GLU VAL VAL ASP THR ILE ILE SEQRES 22 A 739 ASP ASN SER ASN VAL SER PHE ASN ARG GLU ASP GLU ARG SEQRES 23 A 739 VAL ARG ARG ILE VAL ALA GLU SER SER LYS LEU ALA GLY SEQRES 24 A 739 ILE MSE GLY GLU LEU ARG GLY GLU ARG LEU ASN GLN LEU SEQRES 25 A 739 ARG LYS SER VAL ALA ASP THR VAL GLY VAL SER VAL GLU SEQRES 26 A 739 GLU LEU GLU GLY ILE VAL VAL PRO LEU GLU LYS VAL TYR SEQRES 27 A 739 SER LEU ALA ASP HIS THR ARG CYS ILE LEU PHE MSE LEU SEQRES 28 A 739 GLY ASP GLY LEU VAL PRO SER ASN ALA GLY ALA GLY TYR SEQRES 29 A 739 LEU ALA ARG LEU MSE ILE ARG ARG SER LEU ARG LEU ALA SEQRES 30 A 739 GLU GLU LEU GLU LEU GLY LEU ASP LEU TYR ASP LEU VAL SEQRES 31 A 739 GLU MSE HIS LYS LYS ILE LEU GLY PHE GLU PHE ASP VAL SEQRES 32 A 739 PRO LEU SER THR VAL GLN GLU ILE LEU GLU LEU GLU LYS SEQRES 33 A 739 GLU ARG TYR ARG THR THR VAL SER LYS GLY THR ARG LEU SEQRES 34 A 739 VAL GLU ARG LEU VAL GLU ARG LYS LYS LYS LEU GLU LYS SEQRES 35 A 739 ASP ASP LEU ILE GLU LEU TYR ASP SER HIS GLY ILE PRO SEQRES 36 A 739 VAL GLU LEU ALA VAL GLY ILE ALA ALA GLU LYS GLY ALA SEQRES 37 A 739 GLU VAL GLU MSE PRO LYS ASP ILE TYR ALA GLU LEU ALA SEQRES 38 A 739 LYS ARG HIS SER LYS ALA GLU LYS VAL GLN GLU LYS LYS SEQRES 39 A 739 ILE THR LEU GLN ASN GLU TYR PRO ALA THR GLU LYS LEU SEQRES 40 A 739 TYR TYR ASP ASP PRO THR LEU LEU GLU PHE GLU ALA GLU SEQRES 41 A 739 VAL ILE GLY VAL GLU GLY ASP PHE VAL ILE LEU ASN ARG SEQRES 42 A 739 SER ALA PHE TYR PRO GLU SER GLY GLY GLN ASP ASN ASP SEQRES 43 A 739 VAL GLY TYR LEU ILE ALA ASN GLY GLY LYS PHE GLU VAL SEQRES 44 A 739 VAL ASP VAL LEU GLU ALA ASP GLY VAL VAL LEU HIS VAL SEQRES 45 A 739 VAL LYS GLY ALA LYS PRO GLU VAL GLY THR LYS VAL LYS SEQRES 46 A 739 GLY VAL ILE ASP SER ASP VAL ARG TRP ARG HIS MSE ARG SEQRES 47 A 739 HIS HIS SER ALA THR HIS VAL LEU LEU TYR SER LEU GLN SEQRES 48 A 739 LYS VAL LEU GLY ASN HIS VAL TRP GLN ALA GLY ALA ARG SEQRES 49 A 739 LYS GLU PHE SER LYS ALA ARG LEU ASP VAL THR HIS PHE SEQRES 50 A 739 ARG ARG PRO SER GLU GLU GLU ILE LYS GLU ILE GLU MSE SEQRES 51 A 739 LEU ALA ASN ARG GLU ILE LEU ALA ASN LYS PRO ILE LYS SEQRES 52 A 739 TRP GLU TRP MSE ASP ARG ILE GLU ALA GLU ARG LYS PHE SEQRES 53 A 739 GLY PHE ARG LEU TYR GLN GLY GLY VAL PRO PRO GLY ARG SEQRES 54 A 739 LYS ILE ARG VAL VAL GLN VAL GLY ASP ASP VAL GLN ALA SEQRES 55 A 739 CYS GLY GLY THR HIS CYS ARG SER THR GLY GLU ILE GLY SEQRES 56 A 739 MSE LEU LYS ILE LEU LYS VAL GLU SER ILE GLN ASP GLY SEQRES 57 A 739 VAL ILE ARG PHE GLU PHE ALA ALA GLY GLU ALA MODRES 2ZTG MSE A 1 MET SELENOMETHIONINE MODRES 2ZTG MSE A 65 MET SELENOMETHIONINE MODRES 2ZTG MSE A 147 MET SELENOMETHIONINE MODRES 2ZTG MSE A 148 MET SELENOMETHIONINE MODRES 2ZTG MSE A 216 MET SELENOMETHIONINE MODRES 2ZTG MSE A 236 MET SELENOMETHIONINE MODRES 2ZTG MSE A 301 MET SELENOMETHIONINE MODRES 2ZTG MSE A 350 MET SELENOMETHIONINE MODRES 2ZTG MSE A 369 MET SELENOMETHIONINE MODRES 2ZTG MSE A 392 MET SELENOMETHIONINE MODRES 2ZTG MSE A 472 MET SELENOMETHIONINE MODRES 2ZTG MSE A 597 MET SELENOMETHIONINE MODRES 2ZTG MSE A 650 MET SELENOMETHIONINE MODRES 2ZTG MSE A 667 MET SELENOMETHIONINE MODRES 2ZTG MSE A 716 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 65 8 HET MSE A 147 8 HET MSE A 148 8 HET MSE A 216 8 HET MSE A 236 8 HET MSE A 301 8 HET MSE A 350 8 HET MSE A 369 8 HET MSE A 392 8 HET MSE A 472 8 HET MSE A 597 8 HET MSE A 650 8 HET MSE A 667 8 HET MSE A 716 8 HET A5A A 801 28 HET ZN A 901 1 HET ZN A 902 1 HETNAM MSE SELENOMETHIONINE HETNAM A5A '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE HETNAM ZN ZINC ION FORMUL 1 MSE 15(C5 H11 N O2 SE) FORMUL 2 A5A C13 H19 N7 O7 S FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *152(H2 O) HELIX 1 1 THR A 2 LEU A 8 1 7 HELIX 2 2 ILE A 10 GLU A 15 1 6 HELIX 3 3 GLU A 61 ARG A 75 1 15 HELIX 4 4 ALA A 99 GLN A 105 5 7 HELIX 5 5 LEU A 129 VAL A 135 5 7 HELIX 6 6 TRP A 162 LEU A 177 1 16 HELIX 7 7 LYS A 180 ILE A 184 5 5 HELIX 8 8 LEU A 247 GLY A 256 1 10 HELIX 9 9 THR A 259 PHE A 265 1 7 HELIX 10 10 PHE A 265 ASN A 275 1 11 HELIX 11 11 ASP A 284 GLY A 302 1 19 HELIX 12 12 GLY A 306 GLY A 321 1 16 HELIX 13 13 SER A 323 ASP A 353 1 31 HELIX 14 14 ALA A 360 LEU A 380 1 21 HELIX 15 15 ASP A 385 GLY A 398 1 14 HELIX 16 16 PRO A 404 LYS A 438 1 35 HELIX 17 17 GLU A 441 GLY A 453 1 13 HELIX 18 18 PRO A 455 LYS A 466 1 12 HELIX 19 19 ASP A 475 ARG A 483 1 9 HELIX 20 20 ASP A 589 GLY A 615 1 27 HELIX 21 21 SER A 641 ALA A 658 1 18 HELIX 22 22 ARG A 669 GLY A 677 1 9 HELIX 23 23 PHE A 678 GLN A 682 5 5 HELIX 24 24 SER A 710 GLY A 715 5 6 SHEET 1 A 9 VAL A 19 LYS A 21 0 SHEET 2 A 9 PHE A 30 THR A 32 -1 O THR A 32 N VAL A 19 SHEET 3 A 9 VAL A 185 GLY A 193 -1 O TYR A 186 N TRP A 31 SHEET 4 A 9 ASN A 196 VAL A 205 -1 O ILE A 204 N VAL A 185 SHEET 5 A 9 LEU A 208 GLU A 220 -1 O ALA A 211 N ALA A 203 SHEET 6 A 9 ALA A 231 GLY A 246 -1 O ILE A 240 N MSE A 216 SHEET 7 A 9 LEU A 144 ASN A 154 -1 N MSE A 148 O TYR A 245 SHEET 8 A 9 LEU A 120 ILE A 127 -1 N CYS A 126 O PHE A 145 SHEET 9 A 9 GLY A 79 ARG A 80 1 N GLY A 79 O THR A 121 SHEET 1 B 7 VAL A 19 LYS A 21 0 SHEET 2 B 7 PHE A 30 THR A 32 -1 O THR A 32 N VAL A 19 SHEET 3 B 7 VAL A 185 GLY A 193 -1 O TYR A 186 N TRP A 31 SHEET 4 B 7 ASN A 196 VAL A 205 -1 O ILE A 204 N VAL A 185 SHEET 5 B 7 LEU A 208 GLU A 220 -1 O ALA A 211 N ALA A 203 SHEET 6 B 7 ALA A 231 GLY A 246 -1 O ILE A 240 N MSE A 216 SHEET 7 B 7 ILE A 226 ILE A 228 -1 N ILE A 226 O TYR A 233 SHEET 1 C 2 GLU A 505 LYS A 506 0 SHEET 2 C 2 ARG A 533 SER A 534 1 O SER A 534 N GLU A 505 SHEET 1 D 7 GLY A 555 VAL A 559 0 SHEET 2 D 7 GLY A 548 ALA A 552 -1 N GLY A 548 O VAL A 559 SHEET 3 D 7 LYS A 583 ILE A 588 -1 O LYS A 585 N ILE A 551 SHEET 4 D 7 GLU A 516 GLU A 525 -1 N ALA A 519 O VAL A 584 SHEET 5 D 7 PHE A 528 LEU A 531 -1 O ILE A 530 N GLY A 523 SHEET 6 D 7 VAL A 568 VAL A 572 -1 O HIS A 571 N VAL A 529 SHEET 7 D 7 ASP A 561 ALA A 565 -1 N ASP A 561 O VAL A 572 SHEET 1 E 4 GLN A 620 GLY A 622 0 SHEET 2 E 4 ARG A 631 THR A 635 -1 O ASP A 633 N ALA A 621 SHEET 3 E 4 VAL A 729 ALA A 736 -1 O PHE A 732 N LEU A 632 SHEET 4 E 4 LEU A 717 GLN A 726 -1 N GLU A 723 O ARG A 731 SHEET 1 F 3 ILE A 662 ASP A 668 0 SHEET 2 F 3 LYS A 690 VAL A 696 -1 O GLN A 695 N LYS A 663 SHEET 3 F 3 ASP A 699 ALA A 702 -1 O GLN A 701 N VAL A 694 LINK C MSE A 1 N THR A 2 1555 1555 1.34 LINK C GLU A 64 N MSE A 65 1555 1555 1.33 LINK C MSE A 65 N ARG A 66 1555 1555 1.33 LINK C GLU A 146 N MSE A 147 1555 1555 1.32 LINK C MSE A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N ALA A 149 1555 1555 1.32 LINK C PHE A 215 N MSE A 216 1555 1555 1.33 LINK C MSE A 216 N ASN A 217 1555 1555 1.33 LINK C LYS A 235 N MSE A 236 1555 1555 1.33 LINK C MSE A 236 N ASP A 237 1555 1555 1.33 LINK C ILE A 300 N MSE A 301 1555 1555 1.33 LINK C MSE A 301 N GLY A 302 1555 1555 1.33 LINK C PHE A 349 N MSE A 350 1555 1555 1.33 LINK C MSE A 350 N LEU A 351 1555 1555 1.32 LINK C LEU A 368 N MSE A 369 1555 1555 1.32 LINK C MSE A 369 N ILE A 370 1555 1555 1.33 LINK C GLU A 391 N MSE A 392 1555 1555 1.33 LINK C MSE A 392 N HIS A 393 1555 1555 1.33 LINK C GLU A 471 N MSE A 472 1555 1555 1.33 LINK C MSE A 472 N PRO A 473 1555 1555 1.34 LINK C HIS A 596 N MSE A 597 1555 1555 1.32 LINK C MSE A 597 N ARG A 598 1555 1555 1.33 LINK C GLU A 649 N MSE A 650 1555 1555 1.33 LINK C MSE A 650 N LEU A 651 1555 1555 1.32 LINK C TRP A 666 N MSE A 667 1555 1555 1.33 LINK C MSE A 667 N ASP A 668 1555 1555 1.33 LINK C GLY A 715 N MSE A 716 1555 1555 1.33 LINK C MSE A 716 N LEU A 717 1555 1555 1.33 LINK NE2 HIS A 452 ZN ZN A 901 1555 1555 2.07 LINK NE2 HIS A 604 ZN ZN A 902 1555 1555 2.38 LINK SG CYS A 703 ZN ZN A 902 1555 1555 2.13 LINK NE2 HIS A 707 ZN ZN A 902 1555 1555 1.96 LINK ZN ZN A 901 O HOH A1055 1555 1555 2.37 LINK ZN ZN A 901 O HOH A1144 1555 1555 1.94 CISPEP 1 CYS A 23 PRO A 24 0 0.38 CISPEP 2 GLN A 105 PRO A 106 0 0.13 CISPEP 3 ASN A 118 PRO A 119 0 0.06 SITE 1 AC1 20 ARG A 128 ASP A 131 ARG A 140 HIS A 141 SITE 2 AC1 20 LEU A 142 PHE A 145 MSE A 147 TRP A 191 SITE 3 AC1 20 GLU A 209 VAL A 210 ALA A 211 THR A 212 SITE 4 AC1 20 VAL A 214 ASP A 242 THR A 243 GLY A 244 SITE 5 AC1 20 GLY A 246 ARG A 249 HOH A1025 HOH A1152 SITE 1 AC2 6 HIS A 452 HOH A1054 HOH A1055 HOH A1129 SITE 2 AC2 6 HOH A1144 HOH A1146 SITE 1 AC3 5 HIS A 600 HIS A 604 CYS A 703 HIS A 707 SITE 2 AC3 5 HOH A1114 CRYST1 160.391 49.082 98.044 90.00 108.08 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006235 0.000000 0.002035 0.00000 SCALE2 0.000000 0.020374 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010729 0.00000 HETATM 1 N MSE A 1 36.554 -26.382 -54.813 1.00129.74 N HETATM 2 CA MSE A 1 37.413 -25.165 -54.854 1.00129.96 C HETATM 3 C MSE A 1 38.272 -25.033 -53.595 1.00128.03 C HETATM 4 O MSE A 1 37.746 -24.824 -52.499 1.00128.43 O HETATM 5 CB MSE A 1 36.535 -23.924 -55.017 1.00133.18 C HETATM 6 CG MSE A 1 37.311 -22.627 -55.097 1.00137.42 C HETATM 7 SE MSE A 1 36.236 -21.220 -55.847 1.00142.16 SE HETATM 8 CE MSE A 1 36.573 -21.565 -57.723 1.00140.74 C