HEADER CELL ADHESION 16-DEC-08 2ZWK TITLE CRYSTAL STRUCTURE OF INTIMIN-TIR90 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTIMIN; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: D2-D3 DOMAIN, UNP RESIDUES 752-934; COMPND 5 SYNONYM: ATTACHING AND EFFACING PROTEIN, EAE PROTEIN, GAMMA-INTIMIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PUTATIVE TRANSLOCATED INTIMIN RECEPTOR PROTEIN COMPND 9 (TRANSLOCATED INTIMIN RECEPTOR TIR); COMPND 10 CHAIN: B, D, F; COMPND 11 FRAGMENT: IBD DOMAIN, UNP RESIDUES 274-336; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 155864; SOURCE 4 STRAIN: O157:H7 EDL933; SOURCE 5 GENE: INTIMIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 155864; SOURCE 14 STRAIN: O157:H7 EDL933; SOURCE 15 GENE: TIR; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS PROTEIN-PROTEIN COMPLEX, UNIQUE INTIMIN-TIR OCTAMER INTERMEDIATE, KEYWDS 2 CELL MEMBRANE, CELL OUTER MEMBRANE, MEMBRANE, TRANSMEMBRANE, KEYWDS 3 VIRULENCE, RECEPTOR, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Y.MA,F.GAO,D.-F.LI,G.F.GAO REVDAT 3 06-NOV-24 2ZWK 1 REMARK REVDAT 2 01-NOV-23 2ZWK 1 SEQADV REVDAT 1 22-DEC-09 2ZWK 0 JRNL AUTH Y.MA,Q.ZOU,G.F.GAO JRNL TITL STRUCTURAL INSIGHT INTO THE INTERACTION BETWEEN INTIMIN AND JRNL TITL 2 TIR OF ENTEROHAEMORRHAGIC E COLI: EVIDENCE FOR A DYNAMIC JRNL TITL 3 SEQUENTIAL CLUSTERING-AGGREGATING-RETICULATING MODEL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 83.1 REMARK 3 NUMBER OF REFLECTIONS : 23899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.301 REMARK 3 FREE R VALUE : 0.360 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2344 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.29 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.5360 REMARK 3 BIN FREE R VALUE : 0.5260 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 337 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5655 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 115.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 39.71100 REMARK 3 B22 (A**2) : 39.71100 REMARK 3 B33 (A**2) : -79.42200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.65 REMARK 3 ESD FROM SIGMAA (A) : 1.00 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.71 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.00 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.880 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 97.15 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZWK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000028515. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 98.0 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26817 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 66.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : 0.12500 REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41300 REMARK 200 R SYM FOR SHELL (I) : 0.41300 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 2ZQK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)2SO4, 5% 2-PROPANOL, PH 4.6, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 48.39000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 322.15500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 161.07750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.39000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 483.23250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 483.23250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.39000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 161.07750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 48.39000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 322.15500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 48.39000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 322.15500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 48.39000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 483.23250 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 161.07750 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 48.39000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 161.07750 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 483.23250 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 48.39000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 48.39000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 322.15500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 96.78000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 -96.78000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 96.78000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 -96.78000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 5 REMARK 465 MET B 5 REMARK 465 LEU B 69 REMARK 465 GLU B 70 REMARK 465 HIS B 71 REMARK 465 HIS B 72 REMARK 465 HIS B 73 REMARK 465 HIS B 74 REMARK 465 HIS B 75 REMARK 465 HIS B 76 REMARK 465 MET C 5 REMARK 465 MET D 5 REMARK 465 LEU D 69 REMARK 465 GLU D 70 REMARK 465 HIS D 71 REMARK 465 HIS D 72 REMARK 465 HIS D 73 REMARK 465 HIS D 74 REMARK 465 HIS D 75 REMARK 465 HIS D 76 REMARK 465 MET E 5 REMARK 465 MET F 5 REMARK 465 LEU F 69 REMARK 465 GLU F 70 REMARK 465 HIS F 71 REMARK 465 HIS F 72 REMARK 465 HIS F 73 REMARK 465 HIS F 74 REMARK 465 HIS F 75 REMARK 465 HIS F 76 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 11 131.78 171.96 REMARK 500 ASN A 21 34.76 -170.12 REMARK 500 ASN A 22 27.47 33.15 REMARK 500 ASP A 45 -136.30 26.71 REMARK 500 ALA A 62 75.76 -60.84 REMARK 500 SER A 63 -16.74 174.49 REMARK 500 ASP A 82 54.05 -105.37 REMARK 500 LYS A 83 45.17 32.66 REMARK 500 CYS A 112 43.61 -76.92 REMARK 500 LYS A 113 69.09 13.92 REMARK 500 ASN A 114 -11.29 66.94 REMARK 500 THR A 121 7.87 -56.60 REMARK 500 VAL A 122 -80.31 -102.32 REMARK 500 SER A 129 -72.04 -82.39 REMARK 500 TYR A 139 -103.76 -106.74 REMARK 500 SER A 140 -58.31 46.24 REMARK 500 SER A 141 17.67 -66.81 REMARK 500 LYS A 150 99.85 46.74 REMARK 500 SER A 154 -72.14 -48.09 REMARK 500 GLN A 169 -92.86 74.73 REMARK 500 ASN A 170 80.69 36.67 REMARK 500 VAL A 177 30.35 -66.44 REMARK 500 ASN A 178 22.33 -156.29 REMARK 500 ARG B 12 -72.26 -68.60 REMARK 500 PHE B 20 31.42 -76.69 REMARK 500 ASP B 24 9.41 -54.12 REMARK 500 LEU B 33 59.36 -113.74 REMARK 500 GLU B 59 28.24 -76.21 REMARK 500 GLU B 60 -66.67 -120.01 REMARK 500 ALA B 61 33.26 -72.87 REMARK 500 LYS B 62 -54.14 -141.83 REMARK 500 GLN B 64 -34.17 -134.53 REMARK 500 GLU B 67 70.60 -104.41 REMARK 500 GLU C 9 142.37 -37.46 REMARK 500 GLN C 33 122.23 -39.30 REMARK 500 TYR C 34 22.36 84.63 REMARK 500 ALA C 62 68.62 -60.61 REMARK 500 SER C 63 -7.62 -173.26 REMARK 500 LYS C 83 67.24 -6.25 REMARK 500 ASP C 100 -152.50 -81.01 REMARK 500 ALA C 103 115.32 178.15 REMARK 500 TYR C 104 138.82 -33.72 REMARK 500 TYR C 105 -49.77 -26.03 REMARK 500 MET C 109 6.44 -62.39 REMARK 500 CYS C 112 39.72 -73.59 REMARK 500 LYS C 113 67.21 20.45 REMARK 500 VAL C 122 -75.72 -41.94 REMARK 500 ILE C 126 -31.80 -38.61 REMARK 500 ALA C 133 -17.02 -45.06 REMARK 500 TYR C 139 -84.77 -117.21 REMARK 500 REMARK 500 THIS ENTRY HAS 127 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZQK RELATED DB: PDB REMARK 900 INTIMIN-TIR68 COMPLEX DBREF 2ZWK A 6 188 UNP P43261 EAE_ECO57 752 934 DBREF 2ZWK B 6 68 UNP Q7DB77 Q7DB77_ECO57 274 336 DBREF 2ZWK C 6 188 UNP P43261 EAE_ECO57 752 934 DBREF 2ZWK D 6 68 UNP Q7DB77 Q7DB77_ECO57 274 336 DBREF 2ZWK E 6 188 UNP P43261 EAE_ECO57 752 934 DBREF 2ZWK F 6 68 UNP Q7DB77 Q7DB77_ECO57 274 336 SEQADV 2ZWK MET A 5 UNP P43261 INITIATING METHIONINE SEQADV 2ZWK MET B 5 UNP Q7DB77 INITIATING METHIONINE SEQADV 2ZWK LEU B 69 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK GLU B 70 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS B 71 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS B 72 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS B 73 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS B 74 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS B 75 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS B 76 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK MET C 5 UNP P43261 INITIATING METHIONINE SEQADV 2ZWK MET D 5 UNP Q7DB77 INITIATING METHIONINE SEQADV 2ZWK LEU D 69 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK GLU D 70 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS D 71 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS D 72 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS D 73 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS D 74 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS D 75 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS D 76 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK MET E 5 UNP P43261 INITIATING METHIONINE SEQADV 2ZWK MET F 5 UNP Q7DB77 INITIATING METHIONINE SEQADV 2ZWK LEU F 69 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK GLU F 70 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS F 71 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS F 72 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS F 73 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS F 74 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS F 75 UNP Q7DB77 EXPRESSION TAG SEQADV 2ZWK HIS F 76 UNP Q7DB77 EXPRESSION TAG SEQRES 1 A 184 MET PHE PHE ASP GLU LEU LYS ILE ASP ASN LYS VAL ASP SEQRES 2 A 184 ILE ILE GLY ASN ASN VAL ARG GLY GLU LEU PRO ASN ILE SEQRES 3 A 184 TRP LEU GLN TYR GLY GLN PHE LYS LEU LYS ALA SER GLY SEQRES 4 A 184 GLY ASP GLY THR TYR SER TRP TYR SER GLU ASN THR SER SEQRES 5 A 184 ILE ALA THR VAL ASP ALA SER GLY LYS VAL THR LEU ASN SEQRES 6 A 184 GLY LYS GLY SER VAL VAL ILE LYS ALA THR SER GLY ASP SEQRES 7 A 184 LYS GLN THR VAL SER TYR THR ILE LYS ALA PRO SER TYR SEQRES 8 A 184 MET ILE LYS VAL ASP LYS GLN ALA TYR TYR ALA ASP ALA SEQRES 9 A 184 MET SER ILE CYS LYS ASN LEU LEU PRO SER THR GLN THR SEQRES 10 A 184 VAL LEU SER ASP ILE TYR ASP SER TRP GLY ALA ALA ASN SEQRES 11 A 184 LYS TYR SER HIS TYR SER SER MET ASN SER ILE THR ALA SEQRES 12 A 184 TRP ILE LYS GLN THR SER SER GLU GLN ARG SER GLY VAL SEQRES 13 A 184 SER SER THR TYR ASN LEU ILE THR GLN ASN PRO LEU PRO SEQRES 14 A 184 GLY VAL ASN VAL ASN THR PRO ASN VAL TYR ALA VAL CYS SEQRES 15 A 184 VAL GLU SEQRES 1 B 72 MET ALA THR GLU THR ALA THR ARG ASP GLN LEU THR LYS SEQRES 2 B 72 GLU ALA PHE GLN ASN PRO ASP ASN GLN LYS VAL ASN ILE SEQRES 3 B 72 ASP GLU LEU GLY ASN ALA ILE PRO SER GLY VAL LEU LYS SEQRES 4 B 72 ASP ASP VAL VAL ALA ASN ILE GLU GLU GLN ALA LYS ALA SEQRES 5 B 72 ALA GLY GLU GLU ALA LYS GLN GLN ALA ILE GLU ASN LEU SEQRES 6 B 72 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 184 MET PHE PHE ASP GLU LEU LYS ILE ASP ASN LYS VAL ASP SEQRES 2 C 184 ILE ILE GLY ASN ASN VAL ARG GLY GLU LEU PRO ASN ILE SEQRES 3 C 184 TRP LEU GLN TYR GLY GLN PHE LYS LEU LYS ALA SER GLY SEQRES 4 C 184 GLY ASP GLY THR TYR SER TRP TYR SER GLU ASN THR SER SEQRES 5 C 184 ILE ALA THR VAL ASP ALA SER GLY LYS VAL THR LEU ASN SEQRES 6 C 184 GLY LYS GLY SER VAL VAL ILE LYS ALA THR SER GLY ASP SEQRES 7 C 184 LYS GLN THR VAL SER TYR THR ILE LYS ALA PRO SER TYR SEQRES 8 C 184 MET ILE LYS VAL ASP LYS GLN ALA TYR TYR ALA ASP ALA SEQRES 9 C 184 MET SER ILE CYS LYS ASN LEU LEU PRO SER THR GLN THR SEQRES 10 C 184 VAL LEU SER ASP ILE TYR ASP SER TRP GLY ALA ALA ASN SEQRES 11 C 184 LYS TYR SER HIS TYR SER SER MET ASN SER ILE THR ALA SEQRES 12 C 184 TRP ILE LYS GLN THR SER SER GLU GLN ARG SER GLY VAL SEQRES 13 C 184 SER SER THR TYR ASN LEU ILE THR GLN ASN PRO LEU PRO SEQRES 14 C 184 GLY VAL ASN VAL ASN THR PRO ASN VAL TYR ALA VAL CYS SEQRES 15 C 184 VAL GLU SEQRES 1 D 72 MET ALA THR GLU THR ALA THR ARG ASP GLN LEU THR LYS SEQRES 2 D 72 GLU ALA PHE GLN ASN PRO ASP ASN GLN LYS VAL ASN ILE SEQRES 3 D 72 ASP GLU LEU GLY ASN ALA ILE PRO SER GLY VAL LEU LYS SEQRES 4 D 72 ASP ASP VAL VAL ALA ASN ILE GLU GLU GLN ALA LYS ALA SEQRES 5 D 72 ALA GLY GLU GLU ALA LYS GLN GLN ALA ILE GLU ASN LEU SEQRES 6 D 72 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 184 MET PHE PHE ASP GLU LEU LYS ILE ASP ASN LYS VAL ASP SEQRES 2 E 184 ILE ILE GLY ASN ASN VAL ARG GLY GLU LEU PRO ASN ILE SEQRES 3 E 184 TRP LEU GLN TYR GLY GLN PHE LYS LEU LYS ALA SER GLY SEQRES 4 E 184 GLY ASP GLY THR TYR SER TRP TYR SER GLU ASN THR SER SEQRES 5 E 184 ILE ALA THR VAL ASP ALA SER GLY LYS VAL THR LEU ASN SEQRES 6 E 184 GLY LYS GLY SER VAL VAL ILE LYS ALA THR SER GLY ASP SEQRES 7 E 184 LYS GLN THR VAL SER TYR THR ILE LYS ALA PRO SER TYR SEQRES 8 E 184 MET ILE LYS VAL ASP LYS GLN ALA TYR TYR ALA ASP ALA SEQRES 9 E 184 MET SER ILE CYS LYS ASN LEU LEU PRO SER THR GLN THR SEQRES 10 E 184 VAL LEU SER ASP ILE TYR ASP SER TRP GLY ALA ALA ASN SEQRES 11 E 184 LYS TYR SER HIS TYR SER SER MET ASN SER ILE THR ALA SEQRES 12 E 184 TRP ILE LYS GLN THR SER SER GLU GLN ARG SER GLY VAL SEQRES 13 E 184 SER SER THR TYR ASN LEU ILE THR GLN ASN PRO LEU PRO SEQRES 14 E 184 GLY VAL ASN VAL ASN THR PRO ASN VAL TYR ALA VAL CYS SEQRES 15 E 184 VAL GLU SEQRES 1 F 72 MET ALA THR GLU THR ALA THR ARG ASP GLN LEU THR LYS SEQRES 2 F 72 GLU ALA PHE GLN ASN PRO ASP ASN GLN LYS VAL ASN ILE SEQRES 3 F 72 ASP GLU LEU GLY ASN ALA ILE PRO SER GLY VAL LEU LYS SEQRES 4 F 72 ASP ASP VAL VAL ALA ASN ILE GLU GLU GLN ALA LYS ALA SEQRES 5 F 72 ALA GLY GLU GLU ALA LYS GLN GLN ALA ILE GLU ASN LEU SEQRES 6 F 72 GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 GLY A 20 ASN A 22 5 3 HELIX 2 2 TYR A 104 CYS A 112 1 9 HELIX 3 3 VAL A 122 GLY A 131 1 10 HELIX 4 4 ALA A 132 TYR A 136 5 5 HELIX 5 5 THR A 152 SER A 158 1 7 HELIX 6 6 THR B 7 PHE B 20 1 14 HELIX 7 7 GLN B 21 ASP B 24 5 4 HELIX 8 8 LYS B 43 GLU B 59 1 17 HELIX 9 9 TYR C 104 CYS C 112 1 9 HELIX 10 10 GLN C 120 TRP C 130 1 11 HELIX 11 11 ALA C 132 TYR C 136 5 5 HELIX 12 12 THR C 152 SER C 158 1 7 HELIX 13 13 THR D 7 ALA D 19 1 13 HELIX 14 14 ASN D 22 ASP D 24 5 3 HELIX 15 15 ASP D 45 ALA D 57 1 13 HELIX 16 16 ALA D 61 ILE D 66 1 6 HELIX 17 17 ALA E 106 ILE E 111 1 6 HELIX 18 18 THR E 119 ILE E 126 1 8 HELIX 19 19 THR E 152 GLY E 159 1 8 HELIX 20 20 THR F 7 PHE F 20 1 14 HELIX 21 21 GLN F 21 ASP F 24 5 4 HELIX 22 22 VAL F 46 GLU F 51 5 6 HELIX 23 23 ALA F 57 ALA F 61 5 5 SHEET 1 A 4 ASP A 17 ILE A 18 0 SHEET 2 A 4 GLN A 36 LYS A 38 -1 O LYS A 38 N ASP A 17 SHEET 3 A 4 LYS A 65 LEU A 68 -1 O VAL A 66 N PHE A 37 SHEET 4 A 4 ALA A 58 VAL A 60 -1 N THR A 59 O THR A 67 SHEET 1 B 3 TRP A 31 LEU A 32 0 SHEET 2 B 3 MET A 96 GLN A 102 1 O ILE A 97 N TRP A 31 SHEET 3 B 3 TYR A 183 VAL A 187 -1 O CYS A 186 N LYS A 98 SHEET 1 C 3 SER A 49 SER A 52 0 SHEET 2 C 3 VAL A 74 SER A 80 -1 O LYS A 77 N TYR A 51 SHEET 3 C 3 GLN A 84 ILE A 90 -1 O ILE A 90 N VAL A 74 SHEET 1 D 3 THR A 146 TRP A 148 0 SHEET 2 D 3 VAL A 160 ASN A 165 -1 O TYR A 164 N ALA A 147 SHEET 3 D 3 GLN A 169 ASN A 176 -1 O GLN A 169 N ASN A 165 SHEET 1 E 2 GLN B 26 ILE B 30 0 SHEET 2 E 2 ALA B 36 LEU B 42 -1 O VAL B 41 N LYS B 27 SHEET 1 F 2 LYS C 11 ILE C 12 0 SHEET 2 F 2 ALA C 41 SER C 42 -1 O SER C 42 N LYS C 11 SHEET 1 G 5 VAL C 23 GLY C 25 0 SHEET 2 G 5 VAL C 16 ILE C 18 -1 N VAL C 16 O GLY C 25 SHEET 3 G 5 GLN C 36 LYS C 38 -1 O LYS C 38 N ASP C 17 SHEET 4 G 5 LYS C 65 LEU C 68 -1 O VAL C 66 N PHE C 37 SHEET 5 G 5 ALA C 58 VAL C 60 -1 N THR C 59 O THR C 67 SHEET 1 H 3 TRP C 31 LEU C 32 0 SHEET 2 H 3 MET C 96 GLN C 102 1 O ILE C 97 N TRP C 31 SHEET 3 H 3 TYR C 183 VAL C 187 -1 O CYS C 186 N LYS C 98 SHEET 1 I 3 TYR C 48 SER C 52 0 SHEET 2 I 3 VAL C 74 SER C 80 -1 O THR C 79 N SER C 49 SHEET 3 I 3 THR C 85 ILE C 90 -1 O TYR C 88 N ILE C 76 SHEET 1 J 3 THR C 146 TRP C 148 0 SHEET 2 J 3 VAL C 160 ASN C 165 -1 O TYR C 164 N ALA C 147 SHEET 3 J 3 GLN C 169 ASN C 176 -1 O LEU C 172 N THR C 163 SHEET 1 K 2 GLN D 26 ILE D 30 0 SHEET 2 K 2 ALA D 36 LEU D 42 -1 O VAL D 41 N LYS D 27 SHEET 1 L 2 VAL E 16 ASP E 17 0 SHEET 2 L 2 ARG E 24 GLY E 25 -1 O GLY E 25 N VAL E 16 SHEET 1 M 3 TRP E 31 LEU E 32 0 SHEET 2 M 3 MET E 96 GLN E 102 1 O ILE E 97 N TRP E 31 SHEET 3 M 3 TYR E 183 VAL E 187 -1 O ALA E 184 N LYS E 101 SHEET 1 N 2 PHE E 37 LYS E 38 0 SHEET 2 N 2 LYS E 65 VAL E 66 -1 O VAL E 66 N PHE E 37 SHEET 1 O 3 TYR E 48 SER E 49 0 SHEET 2 O 3 VAL E 74 SER E 80 -1 O THR E 79 N SER E 49 SHEET 3 O 3 GLN E 84 ILE E 90 -1 O VAL E 86 N ALA E 78 SHEET 1 P 2 GLN F 26 ILE F 30 0 SHEET 2 P 2 ALA F 36 LEU F 42 -1 O VAL F 41 N LYS F 27 SSBOND 1 CYS A 112 CYS A 186 1555 1555 2.03 SSBOND 2 CYS C 112 CYS C 186 1555 1555 2.03 SSBOND 3 CYS E 112 CYS E 186 1555 1555 2.03 CRYST1 96.780 96.780 644.310 90.00 90.00 90.00 I 41 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010333 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001552 0.00000