HEADER VIRAL PROTEIN 19-APR-26 30BG TITLE STRUCTURE OF THE HEPATITIS C VIRUS E2 CORE FROM GENOTYPE 6A IN COMPLEX TITLE 2 WITH 1-69 GERMLINE-REVERTED VARIANTS OF THE BROADLY NEUTRALIZING TITLE 3 ANTIBODY U1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HCV E2 ENVELOPE PROTEIN; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB U1 1-69 HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: FAB U1 1-69 LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1; SOURCE 3 ORGANISM_TAXID: 595609; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HEPATITIS C VIRUS, E2 ENVELOPE PROTEIN, NEUTRALIZING ANTIBODIES, GERM KEYWDS 2 LINE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.YECHEZKEL,N.TZARUM REVDAT 1 07-OCT-26 30BG 0 JRNL AUTH I.YECHEZKEL,H.MAYMON,A.TENNENHOUSE,F.CHEN,H.TARABIH,J.WEISZ, JRNL AUTH 2 R.FRAENKEL,S.J.FLEISHMAN,M.LAW,N.TZARUM JRNL TITL STRUCTURAL AND BIOCHEMICAL STUDIES OF THE HEPATITIS C VIRUS JRNL TITL 2 ENVELOPE PROTEINS TO PROMOTE GERMLINE-TARGETING VACCINE JRNL TITL 3 DESIGN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.0 REMARK 3 NUMBER OF REFLECTIONS : 8674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.270 REMARK 3 R VALUE (WORKING SET) : 0.268 REMARK 3 FREE R VALUE : 0.324 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 416 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.6100 - 4.7700 0.99 3252 171 0.2524 0.2874 REMARK 3 2 4.7700 - 3.7800 0.93 2917 145 0.2627 0.3564 REMARK 3 3 3.7800 - 3.3100 0.67 2089 100 0.3335 0.4009 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.573 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.687 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4500 REMARK 3 ANGLE : 1.551 6131 REMARK 3 CHIRALITY : 0.221 700 REMARK 3 PLANARITY : 0.012 775 REMARK 3 DIHEDRAL : 16.122 1599 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 30BG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-APR-26. REMARK 100 THE DEPOSITION ID IS D_1292156335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAY-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS4 X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9197 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 54.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.68300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.36 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES 1.17.1_3660 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CHLORIDE, AND 20% REMARK 280 (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.92450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.75500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.53600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.75500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.92450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.53600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN E 412 REMARK 465 LEU E 413 REMARK 465 ILE E 414 REMARK 465 ASN E 415 REMARK 465 THR E 416 REMARK 465 ASN E 417 REMARK 465 GLY E 418 REMARK 465 SER E 419 REMARK 465 TRP E 420 REMARK 465 HIS E 421 REMARK 465 LYS E 467 REMARK 465 ASN E 468 REMARK 465 VAL E 469 REMARK 465 ASP E 470 REMARK 465 SER E 471 REMARK 465 SER E 472 REMARK 465 GLY E 473 REMARK 465 CYS E 474 REMARK 465 PRO E 475 REMARK 465 GLU E 476 REMARK 465 ARG E 477 REMARK 465 MET E 478 REMARK 465 ALA E 479 REMARK 465 ALA E 480 REMARK 465 CYS E 481 REMARK 465 GLY E 482 REMARK 465 SER E 483 REMARK 465 SER E 484 REMARK 465 GLY E 485 REMARK 465 CYS E 486 REMARK 465 TRP E 487 REMARK 465 HIS E 488 REMARK 465 TYR E 489 REMARK 465 ALA E 490 REMARK 465 PRO E 591 REMARK 465 GLY E 592 REMARK 465 GLY E 593 REMARK 465 PRO E 594 REMARK 465 THR E 595 REMARK 465 ASP E 596 REMARK 465 GLY E 597 REMARK 465 GLY E 598 REMARK 465 SER E 599 REMARK 465 GLU H 0 REMARK 465 GLN H 1 REMARK 465 VAL H 2 REMARK 465 SER H 25 REMARK 465 GLY H 26 REMARK 465 GLY H 27 REMARK 465 THR H 28 REMARK 465 PHE H 29 REMARK 465 SER H 30 REMARK 465 GLN H 43 REMARK 465 LYS H 214 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 GLY H 217 REMARK 465 SER H 218 REMARK 465 GLU L 1 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 LEU H 138 CG1 VAL H 211 1.71 REMARK 500 OD1 ASN H 97 OD1 ASN H 100G 1.82 REMARK 500 O ILE H 52 O PHE H 54 1.85 REMARK 500 O GLY H 134 OG SER H 186 1.93 REMARK 500 OE2 GLU H 95 O PRO H 100F 2.00 REMARK 500 O HIS L 189 NH2 ARG L 211 2.01 REMARK 500 NH1 ARG E 614 OG1 THR E 621 2.04 REMARK 500 ND2 ASN E 423 O5 NAG E 701 2.05 REMARK 500 ND1 HIS H 200 OG SER H 203 2.07 REMARK 500 CD2 LEU L 33 CD1 PHE L 71 2.08 REMARK 500 O SER L 93 NH1 ARG L 96 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP H 72 OG SER L 65 3555 1.47 REMARK 500 N SER H 74 OG SER L 65 3555 1.99 REMARK 500 OG1 THR H 193 NH1 ARG L 142 4455 2.08 REMARK 500 O THR E 546 C8 NAG E 701 4456 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO E 619 N PRO E 619 CA 0.225 REMARK 500 PHE H 146 C PRO H 147 N 0.159 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO E 619 C - N - CA ANGL. DEV. = 19.2 DEGREES REMARK 500 PRO E 619 CA - N - CD ANGL. DEV. = -10.4 DEGREES REMARK 500 PHE H 54 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP E 495 -111.79 -141.60 REMARK 500 THR E 510 -142.72 -104.59 REMARK 500 SER E 512 -170.93 73.73 REMARK 500 TYR E 613 36.98 -86.98 REMARK 500 THR E 621 35.16 -87.31 REMARK 500 THR H 56 -81.79 -129.73 REMARK 500 GLN H 64 -110.91 -92.81 REMARK 500 SER H 82 74.80 22.96 REMARK 500 PRO H 119 -176.12 -69.07 REMARK 500 SER L 30 -128.42 57.46 REMARK 500 ALA L 51 -54.16 71.98 REMARK 500 ASP L 82 3.52 -69.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG H 38 0.21 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 30BG E 412 645 PDB 30BG 30BG 412 645 DBREF 30BG H 0 218 PDB 30BG 30BG 0 218 DBREF 30BG L 1 214 PDB 30BG 30BG 1 214 SEQRES 1 E 189 GLN LEU ILE ASN THR ASN GLY SER TRP HIS ILE ASN ARG SEQRES 2 E 189 THR ALA LEU ASN CYS ASN ASP SER LEU GLN THR GLY PHE SEQRES 3 E 189 ILE THR SER LEU PHE TYR ALA LYS ASN VAL ASP SER SER SEQRES 4 E 189 GLY CYS PRO GLU ARG MET ALA ALA CYS GLY SER SER GLY SEQRES 5 E 189 CYS TRP HIS TYR ALA PRO ARG PRO CYS ASP VAL VAL SER SEQRES 6 E 189 ALA ARG THR VAL CYS GLY PRO VAL TYR CYS PHE THR PRO SEQRES 7 E 189 SER PRO VAL VAL VAL GLY THR THR ASP LYS LEU GLY ILE SEQRES 8 E 189 PRO THR TYR ASN TRP GLY GLU ASN GLU THR ASP VAL PHE SEQRES 9 E 189 MET LEU GLU SER LEU ARG PRO PRO THR GLY GLY TRP PHE SEQRES 10 E 189 GLY CYS THR TRP MET ASN SER THR GLY PHE THR LYS THR SEQRES 11 E 189 CYS GLY ALA PRO PRO GLY GLY PRO THR ASP GLY GLY SER SEQRES 12 E 189 GLY PRO TRP ILE THR PRO ARG CYS LEU VAL ASP TYR PRO SEQRES 13 E 189 TYR ARG LEU TRP HIS TYR PRO CYS THR VAL ASN PHE THR SEQRES 14 E 189 LEU HIS LYS VAL ARG MET PHE VAL GLY GLY ILE GLU HIS SEQRES 15 E 189 ARG PHE ASP ALA ALA CYS ASN SEQRES 1 H 230 GLU GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS SEQRES 2 H 230 LYS PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER SEQRES 3 H 230 GLY GLY THR PHE SER SER TYR ALA ILE SER TRP VAL ARG SEQRES 4 H 230 GLN ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE SEQRES 5 H 230 ILE PRO ILE PHE GLY THR ALA ASN TYR ALA GLN LYS PHE SEQRES 6 H 230 GLN GLY ARG VAL THR ILE THR ALA ASP GLU SER THR ALA SEQRES 7 H 230 TYR MET GLU LEU SER SER LEU ARG SER ASP ASP THR ALA SEQRES 8 H 230 VAL TYR TYR CYS ALA ARG GLU VAL ASN LEU LYS THR TRP SEQRES 9 H 230 ASN LEU ALA HIS PRO ASN VAL PHE ASP VAL TRP GLY GLN SEQRES 10 H 230 GLY THR MET LEU THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 H 230 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 230 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 230 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 230 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 230 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 230 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 230 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 230 LYS VAL GLU PRO LYS SER CYS GLY SER SEQRES 1 L 214 GLU LEU THR LEU THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN SER ILE SER SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 214 SER LEU GLN SER GLY VAL PRO PRO ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 L 214 TYR SER THR PRO ARG THR PHE GLY GLN GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET NAG E 701 14 HET NAG E 702 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 6 HOH *15(H2 O) HELIX 1 AA1 GLY E 436 TYR E 443 1 8 HELIX 2 AA2 SER E 498 ARG E 500 5 3 HELIX 3 AA3 MET E 538 LEU E 542 5 5 HELIX 4 AA4 TYR E 613 TYR E 618 1 6 HELIX 5 AA5 PRO E 619 VAL E 622 5 4 HELIX 6 AA6 ARG H 83 THR H 87 5 5 HELIX 7 AA7 SER H 187 THR H 191 5 5 HELIX 8 AA8 SER L 121 LYS L 126 1 6 HELIX 9 AA9 LYS L 183 LYS L 188 1 6 SHEET 1 AA1 3 ALA E 426 LEU E 427 0 SHEET 2 AA1 3 VAL E 502 PHE E 509 -1 O GLY E 504 N ALA E 426 SHEET 3 AA1 3 PRO E 513 VAL E 516 -1 O VAL E 514 N CYS E 508 SHEET 1 AA2 4 ALA E 426 LEU E 427 0 SHEET 2 AA2 4 VAL E 502 PHE E 509 -1 O GLY E 504 N ALA E 426 SHEET 3 AA2 4 GLY E 551 ASN E 556 -1 O MET E 555 N CYS E 503 SHEET 4 AA2 4 THR E 561 GLY E 565 -1 O LYS E 562 N TRP E 554 SHEET 1 AA3 3 CYS E 607 VAL E 609 0 SHEET 2 AA3 3 ILE E 636 CYS E 644 -1 O ALA E 643 N LEU E 608 SHEET 3 AA3 3 THR E 625 VAL E 633 -1 N VAL E 633 O ILE E 636 SHEET 1 AA4 3 VAL H 5 GLN H 6 0 SHEET 2 AA4 3 VAL H 18 LYS H 23 -1 O LYS H 23 N VAL H 5 SHEET 3 AA4 3 ALA H 76 LEU H 80 -1 O LEU H 80 N VAL H 18 SHEET 1 AA5 2 GLU H 10 LYS H 12 0 SHEET 2 AA5 2 LEU H 109 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 1 AA6 4 LEU H 45 ILE H 51 0 SHEET 2 AA6 4 ALA H 33 GLN H 39 -1 N ARG H 38 O GLU H 46 SHEET 3 AA6 4 VAL H 89 GLU H 95 -1 O ALA H 93 N SER H 35 SHEET 4 AA6 4 PHE H 100I TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 AA7 4 SER H 120 LEU H 124 0 SHEET 2 AA7 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA7 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA7 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA8 4 SER H 120 LEU H 124 0 SHEET 2 AA8 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA8 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA8 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA9 3 THR H 151 TRP H 154 0 SHEET 2 AA9 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA9 3 THR H 205 LYS H 210 -1 O THR H 205 N HIS H 200 SHEET 1 AB1 4 LEU L 4 SER L 7 0 SHEET 2 AB1 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB1 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AB1 4 PHE L 62 SER L 65 -1 N SER L 63 O THR L 74 SHEET 1 AB2 6 SER L 10 SER L 14 0 SHEET 2 AB2 6 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AB2 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB2 6 LEU L 33 GLN L 38 -1 N ASN L 34 O GLN L 89 SHEET 5 AB2 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB2 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AB3 4 SER L 114 PHE L 118 0 SHEET 2 AB3 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB3 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AB3 4 SER L 159 THR L 164 -1 N GLN L 160 O THR L 178 SHEET 1 AB4 3 LYS L 145 VAL L 150 0 SHEET 2 AB4 3 VAL L 191 THR L 197 -1 O THR L 197 N LYS L 145 SHEET 3 AB4 3 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS E 429 CYS E 503 1555 1555 2.02 SSBOND 2 CYS E 494 CYS E 564 1555 1555 2.04 SSBOND 3 CYS E 508 CYS E 552 1555 1555 2.27 SSBOND 4 CYS E 607 CYS E 644 1555 1555 2.01 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.02 SSBOND 6 CYS H 140 CYS H 196 1555 1555 2.05 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.04 LINK ND2 ASN E 423 C1 NAG E 701 1555 1555 1.43 LINK ND2 ASN E 623 C1 NAG E 702 1555 1555 1.46 CISPEP 1 PHE H 146 PRO H 147 0 -6.21 CISPEP 2 GLU H 148 PRO H 149 0 2.40 CISPEP 3 SER L 7 PRO L 8 0 -15.47 CISPEP 4 TYR L 140 PRO L 141 0 2.00 CRYST1 59.849 79.072 133.510 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016709 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012647 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007490 0.00000 CONECT 16 4366 CONECT 61 274 CONECT 210 743 CONECT 274 61 CONECT 310 649 CONECT 649 310 CONECT 743 210 CONECT 823 1137 CONECT 967 4380 CONECT 1137 823 CONECT 1286 1789 CONECT 1789 1286 CONECT 2198 2612 CONECT 2612 2198 CONECT 2902 3401 CONECT 3401 2902 CONECT 3749 4228 CONECT 4228 3749 CONECT 4366 16 4367 4377 CONECT 4367 4366 4368 4374 CONECT 4368 4367 4369 4375 CONECT 4369 4368 4370 4376 CONECT 4370 4369 4371 4377 CONECT 4371 4370 4378 CONECT 4372 4373 4374 4379 CONECT 4373 4372 CONECT 4374 4367 4372 CONECT 4375 4368 CONECT 4376 4369 CONECT 4377 4366 4370 CONECT 4378 4371 CONECT 4379 4372 CONECT 4380 967 4381 4391 CONECT 4381 4380 4382 4388 CONECT 4382 4381 4383 4389 CONECT 4383 4382 4384 4390 CONECT 4384 4383 4385 4391 CONECT 4385 4384 4392 CONECT 4386 4387 4388 4393 CONECT 4387 4386 CONECT 4388 4381 4386 CONECT 4389 4382 CONECT 4390 4383 CONECT 4391 4380 4384 CONECT 4392 4385 CONECT 4393 4386 MASTER 385 0 2 9 47 0 0 6 4405 3 46 50 END