HEADER HYDROLASE 23-APR-26 30FO TITLE PUTATIVE POLYURETHANE DEGRADING AMIDASE IN PMS BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPHINGOMONAS SPERMIDINIFACIENS; SOURCE 3 ORGANISM_TAXID: 1141889; SOURCE 4 GENE: COC42_04005; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BICER,D.E.OTZEN,J.P.MORTH,S.S.THIRUP REVDAT 2 11-NOV-26 30FO 1 JRNL REVDAT 1 04-NOV-26 30FO 0 JRNL AUTH D.BICER,D.KOCHUBEI,R.GRAHAM,S.PENA-DIAZ,L.ROTILIO, JRNL AUTH 2 N.L.VILLADSEN,A.SOMMERFELDT,M.B.JOHANSEN,A.SANDAHL, JRNL AUTH 3 S.S.THIRUP,J.P.MORTH,D.E.OTZEN JRNL TITL FRAGMENT-BASED ACTIVE-SITE EXPLORATION OF URETHANE JRNL TITL 2 HYDROLASES REVEALS A DIVERSITY OF URETHANE BINDING MODES. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 82 1298 2026 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 42929454 JRNL DOI 10.1107/S2059798326010624 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX REMARK 1 REF ACTA CRYSTALLOGR., SECT. D: V. 75 861 2019 REMARK 1 REF 2 BIOL. CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 148844 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.284 REMARK 3 R VALUE (WORKING SET) : 0.283 REMARK 3 FREE R VALUE : 0.293 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 7314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.9400 - 5.5600 1.00 5225 269 0.2990 0.2816 REMARK 3 2 5.5600 - 4.4200 1.00 4965 239 0.2712 0.2841 REMARK 3 3 4.4200 - 3.8700 1.00 4880 239 0.2649 0.2741 REMARK 3 4 3.8700 - 3.5200 1.00 4798 279 0.2821 0.2902 REMARK 3 5 3.5200 - 3.2700 1.00 4805 247 0.2889 0.3224 REMARK 3 6 3.2700 - 3.0700 1.00 4743 276 0.2929 0.3184 REMARK 3 7 3.0700 - 2.9200 1.00 4744 271 0.2858 0.2794 REMARK 3 8 2.9200 - 2.7900 1.00 4730 237 0.2864 0.2981 REMARK 3 9 2.7900 - 2.6900 1.00 4747 242 0.2872 0.2945 REMARK 3 10 2.6900 - 2.5900 1.00 4730 228 0.2764 0.2822 REMARK 3 11 2.5900 - 2.5100 1.00 4716 259 0.2735 0.2594 REMARK 3 12 2.5100 - 2.4400 1.00 4717 242 0.2781 0.2909 REMARK 3 13 2.4400 - 2.3800 1.00 4708 227 0.2681 0.2703 REMARK 3 14 2.3800 - 2.3200 1.00 4713 237 0.2647 0.2774 REMARK 3 15 2.3200 - 2.2700 1.00 4690 253 0.2713 0.3089 REMARK 3 16 2.2700 - 2.2200 1.00 4680 233 0.2746 0.2801 REMARK 3 17 2.2200 - 2.1700 1.00 4667 245 0.2853 0.2985 REMARK 3 18 2.1700 - 2.1300 1.00 4718 224 0.2762 0.3073 REMARK 3 19 2.1300 - 2.0900 1.00 4648 239 0.2772 0.3047 REMARK 3 20 2.0900 - 2.0600 1.00 4674 238 0.2860 0.2996 REMARK 3 21 2.0600 - 2.0300 1.00 4650 256 0.2760 0.3081 REMARK 3 22 2.0300 - 1.9900 1.00 4643 247 0.2835 0.2917 REMARK 3 23 1.9900 - 1.9700 1.00 4708 222 0.2946 0.3076 REMARK 3 24 1.9700 - 1.9400 1.00 4670 237 0.3019 0.3144 REMARK 3 25 1.9400 - 1.9100 1.00 4653 244 0.2917 0.2967 REMARK 3 26 1.9100 - 1.8900 1.00 4603 255 0.3032 0.2882 REMARK 3 27 1.8900 - 1.8600 1.00 4675 205 0.3006 0.3141 REMARK 3 28 1.8600 - 1.8400 0.99 4628 257 0.3164 0.3044 REMARK 3 29 1.8400 - 1.8200 0.99 4593 243 0.3359 0.3466 REMARK 3 30 1.8200 - 1.8000 0.96 4409 224 0.3411 0.3531 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.239 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.194 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 6456 REMARK 3 ANGLE : 0.946 8828 REMARK 3 CHIRALITY : 0.055 1013 REMARK 3 PLANARITY : 0.009 1167 REMARK 3 DIHEDRAL : 12.551 2290 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 30FO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAY-26. REMARK 100 THE DEPOSITION ID IS D_1292156472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.7293 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X CDTE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 149060 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.799 REMARK 200 RESOLUTION RANGE LOW (A) : 49.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 14.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % W/V PEG 3,350; 0.2 M MAGNESIUM REMARK 280 ACETATE TETRAHYDRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 145.45600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 290.91200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 218.18400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 363.64000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.72800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 145.45600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 290.91200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 363.64000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 218.18400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.72800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 768 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 59 REMARK 465 VAL A 60 REMARK 465 ALA A 61 REMARK 465 ALA A 432 REMARK 465 ALA A 433 REMARK 465 MET B 1 REMARK 465 GLY B 58 REMARK 465 PRO B 59 REMARK 465 VAL B 60 REMARK 465 ALA B 61 REMARK 465 ASP B 62 REMARK 465 ALA B 432 REMARK 465 ALA B 433 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 229 CA - CB - CG ANGL. DEV. = 22.3 DEGREES REMARK 500 LEU B 229 CA - CB - CG ANGL. DEV. = 21.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 63 71.83 58.67 REMARK 500 SER A 150 46.75 -86.99 REMARK 500 LEU A 210 -34.26 71.66 REMARK 500 ARG A 414 35.27 -94.31 REMARK 500 ASP B 141 96.68 -161.34 REMARK 500 SER B 150 37.25 -93.53 REMARK 500 LEU B 210 -33.17 70.37 REMARK 500 ARG B 414 35.67 -98.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 198 ARG A 199 -146.23 REMARK 500 HIS B 198 ARG B 199 -147.84 REMARK 500 REMARK 500 REMARK: NULL DBREF1 30FO A 1 433 UNP A0A2A4B7C5_9SPHN DBREF2 30FO A A0A2A4B7C5 1 433 DBREF1 30FO B 1 433 UNP A0A2A4B7C5_9SPHN DBREF2 30FO B A0A2A4B7C5 1 433 SEQRES 1 A 433 MET ARG SER ALA LEU ALA THR ALA ALA ALA ILE ARG ALA SEQRES 2 A 433 GLY GLU THR SER ALA ARG ALA GLU THR ASP THR ALA ILE SEQRES 3 A 433 ALA ARG ILE GLU ALA GLY ASP ALA ALA ILE ASN ALA VAL SEQRES 4 A 433 VAL VAL ARG ASP PHE ASP ARG ALA ARG ALA ALA ALA ASP SEQRES 5 A 433 ALA ILE ASP ALA ARG GLY PRO VAL ALA ASP ALA MET PRO SEQRES 6 A 433 LEU LEU GLY VAL PRO MET THR VAL LYS GLU ALA PHE ASP SEQRES 7 A 433 ILE GLU GLY LEU PRO THR HIS TRP GLY LEU ALA GLN HIS SEQRES 8 A 433 ALA GLY ASN ILE ALA THR SER ASP ALA GLU ALA VAL ARG SEQRES 9 A 433 ARG LEU LYS ALA ALA GLY ALA ILE ILE LEU GLY LYS THR SEQRES 10 A 433 ASN LEU PRO LYS ALA LEU GLY ASP TRP GLN SER VAL ASN SEQRES 11 A 433 SER ILE HIS GLY ARG THR ASN HIS PRO LEU ASP PRO THR SEQRES 12 A 433 ARG THR PRO GLY GLY SER SER GLY GLY SER ALA ALA ALA SEQRES 13 A 433 LEU ALA ALA GLY TYR VAL PRO ILE GLU MET GLY SER ASP SEQRES 14 A 433 ILE GLY GLY SER ILE ARG VAL PRO ALA HIS PHE CYS GLY SEQRES 15 A 433 VAL TRP GLY LEU LYS PRO THR TRP ASN ALA ILE SER SER SEQRES 16 A 433 LEU GLY HIS ARG TYR PRO LYS THR ASP GLY ALA GLU THR SEQRES 17 A 433 VAL LEU GLY ALA VAL GLY PRO MET ALA ARG THR GLY GLU SEQRES 18 A 433 ASP LEU ALA VAL LEU LEU ASP LEU LEU SER ALA LEU PRO SEQRES 19 A 433 LEU PRO PRO PRO ARG PRO ALA LYS ARG VAL LEU ALA LEU SEQRES 20 A 433 THR GLN HIS PRO GLU THR ARG THR ALA ALA ALA CYS VAL SEQRES 21 A 433 GLU ALA VAL GLU HIS ALA ALA GLU ALA LEU VAL ARG ALA SEQRES 22 A 433 GLY VAL GLU VAL ILE ARG ASP HIS ALA ALA LEU PRO ASP SEQRES 23 A 433 LEU SER ARG GLN HIS GLU ALA TYR GLY LYS MET LEU ASN SEQRES 24 A 433 VAL VAL PHE ALA ARG SER GLN PRO ASP LEU HIS HIS THR SEQRES 25 A 433 MET PRO THR LEU LEU ALA TRP LEU ASN TRP LEU ASP ALA SEQRES 26 A 433 GLN ALA ARG SER THR ARG ALA TRP GLY ALA LEU PHE GLU SEQRES 27 A 433 GLU VAL ASP ALA VAL ILE ALA PRO PRO ALA ALA THR LEU SEQRES 28 A 433 ALA PHE ARG HIS ASP SER ARG PRO LEU ALA GLU ARG THR SEQRES 29 A 433 LEU ASP ILE ASP GLY VAL ASP SER PRO TYR ASP ALA HIS SEQRES 30 A 433 LEU ALA TRP ALA GLY LEU ALA THR TYR PRO GLY LEU PRO SEQRES 31 A 433 ALA CYS VAL VAL PRO ILE GLY THR PHE ASP GLY LEU PRO SEQRES 32 A 433 GLY GLY VAL GLN VAL MET CYS ALA GLN HIS ARG ASP HIS SEQRES 33 A 433 ASP ALA ILE ALA ILE ALA GLN ILE ILE ASP THR GLN LEU SEQRES 34 A 433 GLN GLY ALA ALA SEQRES 1 B 433 MET ARG SER ALA LEU ALA THR ALA ALA ALA ILE ARG ALA SEQRES 2 B 433 GLY GLU THR SER ALA ARG ALA GLU THR ASP THR ALA ILE SEQRES 3 B 433 ALA ARG ILE GLU ALA GLY ASP ALA ALA ILE ASN ALA VAL SEQRES 4 B 433 VAL VAL ARG ASP PHE ASP ARG ALA ARG ALA ALA ALA ASP SEQRES 5 B 433 ALA ILE ASP ALA ARG GLY PRO VAL ALA ASP ALA MET PRO SEQRES 6 B 433 LEU LEU GLY VAL PRO MET THR VAL LYS GLU ALA PHE ASP SEQRES 7 B 433 ILE GLU GLY LEU PRO THR HIS TRP GLY LEU ALA GLN HIS SEQRES 8 B 433 ALA GLY ASN ILE ALA THR SER ASP ALA GLU ALA VAL ARG SEQRES 9 B 433 ARG LEU LYS ALA ALA GLY ALA ILE ILE LEU GLY LYS THR SEQRES 10 B 433 ASN LEU PRO LYS ALA LEU GLY ASP TRP GLN SER VAL ASN SEQRES 11 B 433 SER ILE HIS GLY ARG THR ASN HIS PRO LEU ASP PRO THR SEQRES 12 B 433 ARG THR PRO GLY GLY SER SER GLY GLY SER ALA ALA ALA SEQRES 13 B 433 LEU ALA ALA GLY TYR VAL PRO ILE GLU MET GLY SER ASP SEQRES 14 B 433 ILE GLY GLY SER ILE ARG VAL PRO ALA HIS PHE CYS GLY SEQRES 15 B 433 VAL TRP GLY LEU LYS PRO THR TRP ASN ALA ILE SER SER SEQRES 16 B 433 LEU GLY HIS ARG TYR PRO LYS THR ASP GLY ALA GLU THR SEQRES 17 B 433 VAL LEU GLY ALA VAL GLY PRO MET ALA ARG THR GLY GLU SEQRES 18 B 433 ASP LEU ALA VAL LEU LEU ASP LEU LEU SER ALA LEU PRO SEQRES 19 B 433 LEU PRO PRO PRO ARG PRO ALA LYS ARG VAL LEU ALA LEU SEQRES 20 B 433 THR GLN HIS PRO GLU THR ARG THR ALA ALA ALA CYS VAL SEQRES 21 B 433 GLU ALA VAL GLU HIS ALA ALA GLU ALA LEU VAL ARG ALA SEQRES 22 B 433 GLY VAL GLU VAL ILE ARG ASP HIS ALA ALA LEU PRO ASP SEQRES 23 B 433 LEU SER ARG GLN HIS GLU ALA TYR GLY LYS MET LEU ASN SEQRES 24 B 433 VAL VAL PHE ALA ARG SER GLN PRO ASP LEU HIS HIS THR SEQRES 25 B 433 MET PRO THR LEU LEU ALA TRP LEU ASN TRP LEU ASP ALA SEQRES 26 B 433 GLN ALA ARG SER THR ARG ALA TRP GLY ALA LEU PHE GLU SEQRES 27 B 433 GLU VAL ASP ALA VAL ILE ALA PRO PRO ALA ALA THR LEU SEQRES 28 B 433 ALA PHE ARG HIS ASP SER ARG PRO LEU ALA GLU ARG THR SEQRES 29 B 433 LEU ASP ILE ASP GLY VAL ASP SER PRO TYR ASP ALA HIS SEQRES 30 B 433 LEU ALA TRP ALA GLY LEU ALA THR TYR PRO GLY LEU PRO SEQRES 31 B 433 ALA CYS VAL VAL PRO ILE GLY THR PHE ASP GLY LEU PRO SEQRES 32 B 433 GLY GLY VAL GLN VAL MET CYS ALA GLN HIS ARG ASP HIS SEQRES 33 B 433 ASP ALA ILE ALA ILE ALA GLN ILE ILE ASP THR GLN LEU SEQRES 34 B 433 GLN GLY ALA ALA HET PMS A 501 10 HET PMS B 501 10 HETNAM PMS PHENYLMETHANESULFONIC ACID FORMUL 3 PMS 2(C7 H8 O3 S) FORMUL 5 HOH *476(H2 O) HELIX 1 AA1 SER A 3 ALA A 13 1 11 HELIX 2 AA2 SER A 17 ASN A 37 1 21 HELIX 3 AA3 ASP A 43 ARG A 57 1 15 HELIX 4 AA4 LEU A 88 ALA A 92 5 5 HELIX 5 AA5 ALA A 100 ALA A 109 1 10 HELIX 6 AA6 PRO A 120 GLY A 124 5 5 HELIX 7 AA7 SER A 150 ALA A 159 1 10 HELIX 8 AA8 ILE A 174 GLY A 182 1 9 HELIX 9 AA9 THR A 219 SER A 231 1 13 HELIX 10 AB1 ALA A 256 ALA A 273 1 18 HELIX 11 AB2 ASP A 286 ARG A 304 1 19 HELIX 12 AB3 SER A 305 MET A 313 5 9 HELIX 13 AB4 THR A 315 PHE A 337 1 23 HELIX 14 AB5 PRO A 359 GLU A 362 5 4 HELIX 15 AB6 HIS A 377 TYR A 386 1 10 HELIX 16 AB7 ARG A 414 GLN A 430 1 17 HELIX 17 AB8 SER B 3 ALA B 13 1 11 HELIX 18 AB9 SER B 17 ASN B 37 1 21 HELIX 19 AC1 ASP B 43 ARG B 57 1 15 HELIX 20 AC2 LEU B 88 ALA B 92 5 5 HELIX 21 AC3 ALA B 100 ALA B 109 1 10 HELIX 22 AC4 PRO B 120 GLY B 124 5 5 HELIX 23 AC5 SER B 150 ALA B 159 1 10 HELIX 24 AC6 ILE B 174 GLY B 182 1 9 HELIX 25 AC7 THR B 219 SER B 231 1 13 HELIX 26 AC8 ALA B 256 ALA B 273 1 18 HELIX 27 AC9 ASP B 286 ARG B 304 1 19 HELIX 28 AD1 SER B 305 MET B 313 5 9 HELIX 29 AD2 THR B 315 PHE B 337 1 23 HELIX 30 AD3 PRO B 359 GLU B 362 5 4 HELIX 31 AD4 HIS B 377 TYR B 386 1 10 HELIX 32 AD5 ARG B 414 GLN B 430 1 17 SHEET 1 AA1 3 VAL A 39 ARG A 42 0 SHEET 2 AA1 3 ILE A 112 THR A 117 -1 O LYS A 116 N VAL A 41 SHEET 3 AA1 3 PRO A 70 LYS A 74 1 N MET A 71 O LEU A 114 SHEET 1 AA2 2 VAL A 129 ASN A 130 0 SHEET 2 AA2 2 GLY A 134 ARG A 135 -1 O GLY A 134 N ASN A 130 SHEET 1 AA3 8 ILE A 164 ASP A 169 0 SHEET 2 AA3 8 ALA A 212 ALA A 217 -1 O GLY A 214 N GLY A 167 SHEET 3 AA3 8 TRP A 184 LYS A 187 -1 N TRP A 184 O ALA A 217 SHEET 4 AA3 8 ALA A 391 PHE A 399 -1 O VAL A 393 N GLY A 185 SHEET 5 AA3 8 LEU A 402 MET A 409 -1 O LEU A 402 N PHE A 399 SHEET 6 AA3 8 ALA A 342 ALA A 345 -1 N VAL A 343 O MET A 409 SHEET 7 AA3 8 ARG A 243 ALA A 246 1 N LEU A 245 O ILE A 344 SHEET 8 AA3 8 GLU A 276 ILE A 278 1 O ILE A 278 N VAL A 244 SHEET 1 AA4 2 THR A 364 ILE A 367 0 SHEET 2 AA4 2 VAL A 370 PRO A 373 -1 O SER A 372 N LEU A 365 SHEET 1 AA5 3 VAL B 39 ARG B 42 0 SHEET 2 AA5 3 ILE B 112 THR B 117 -1 O LYS B 116 N VAL B 41 SHEET 3 AA5 3 PRO B 70 LYS B 74 1 N MET B 71 O LEU B 114 SHEET 1 AA6 2 VAL B 129 ASN B 130 0 SHEET 2 AA6 2 GLY B 134 ARG B 135 -1 O GLY B 134 N ASN B 130 SHEET 1 AA7 8 ILE B 164 ASP B 169 0 SHEET 2 AA7 8 ALA B 212 ALA B 217 -1 O ALA B 212 N ASP B 169 SHEET 3 AA7 8 TRP B 184 LYS B 187 -1 N TRP B 184 O ALA B 217 SHEET 4 AA7 8 ALA B 391 PHE B 399 -1 O VAL B 393 N GLY B 185 SHEET 5 AA7 8 LEU B 402 MET B 409 -1 O LEU B 402 N PHE B 399 SHEET 6 AA7 8 ALA B 342 ALA B 345 -1 N VAL B 343 O MET B 409 SHEET 7 AA7 8 ARG B 243 ALA B 246 1 N LEU B 245 O ALA B 342 SHEET 8 AA7 8 GLU B 276 ILE B 278 1 O GLU B 276 N VAL B 244 SHEET 1 AA8 2 THR B 364 ILE B 367 0 SHEET 2 AA8 2 VAL B 370 PRO B 373 -1 O SER B 372 N LEU B 365 LINK OG SER A 173 S PMS A 501 1555 1555 1.59 LINK OG SER B 173 S PMS B 501 1555 1555 1.59 CISPEP 1 GLY A 148 SER A 149 0 1.36 CISPEP 2 GLY B 148 SER B 149 0 3.85 CRYST1 111.515 111.515 436.368 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008967 0.005177 0.000000 0.00000 SCALE2 0.000000 0.010355 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002292 0.00000 CONECT 1200 6296 CONECT 4341 6306 CONECT 6295 6296 6297 CONECT 6296 1200 6295 6303 6304 CONECT 6297 6295 6298 6302 CONECT 6298 6297 6299 CONECT 6299 6298 6300 CONECT 6300 6299 6301 CONECT 6301 6300 6302 CONECT 6302 6297 6301 CONECT 6303 6296 CONECT 6304 6296 CONECT 6305 6306 6307 CONECT 6306 4341 6305 6313 6314 CONECT 6307 6305 6308 6312 CONECT 6308 6307 6309 CONECT 6309 6308 6310 CONECT 6310 6309 6311 CONECT 6311 6310 6312 CONECT 6312 6307 6311 CONECT 6313 6306 CONECT 6314 6306 MASTER 356 0 2 32 30 0 0 6 6788 2 22 68 END