HEADER HYDROLASE 11-JUN-26 31LQ TITLE CRYSTAL STRUCTURE OF GEOBACILLUS THERMODENITRIFICANS YQEK IN COMPLEX TITLE 2 WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIS(5'-NUCLEOSYL)-TETRAPHOSPHATASE (SYMMETRICAL); COMPND 3 CHAIN: A; COMPND 4 EC: 3.6.1.41; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS THERMODENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 33940; SOURCE 4 GENE: YQEK, HSX42_14295; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DINUCLEOTIDES, AP4N, GRAM-POSITIVE BACTERIA, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.D.SHIVAKUMAR,P.BEDRUNKA,S.KIONTKE,G.BANGE REVDAT 1 07-OCT-26 31LQ 0 JRNL AUTH R.D.SHIVAKUMAR,N.HAPPEL,F.BURCHERT,M.BRUCK,L.RANDAU, JRNL AUTH 2 J.PANE-FARRE,U.LINNE,J.FREITAG,R.HINRICHS,S.KIONTKE,G.BANGE, JRNL AUTH 3 P.BEDRUNKA-MEINERT JRNL TITL MOLECULAR INSIGHTS INTO THE PROMISCUOUS AP 4 N HYDROLASE JRNL TITL 2 YQEK. JRNL REF J.BIOL.CHEM. V. 302 13490 2026 JRNL REFN ESSN 1083-351X JRNL PMID 42641892 JRNL DOI 10.1016/J.JBC.2026.113490 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2200 - 3.6600 1.00 2989 157 0.1659 0.1815 REMARK 3 2 3.6600 - 2.9100 1.00 2848 150 0.1891 0.2032 REMARK 3 3 2.9100 - 2.5400 1.00 2802 147 0.1983 0.2157 REMARK 3 4 2.5400 - 2.3100 1.00 2765 146 0.1921 0.2260 REMARK 3 5 2.3100 - 2.1400 1.00 2767 145 0.1845 0.2161 REMARK 3 6 2.1400 - 2.0200 1.00 2739 144 0.2238 0.2248 REMARK 3 7 2.0200 - 1.9100 1.00 2734 144 0.2169 0.2432 REMARK 3 8 1.9100 - 1.8300 1.00 2739 145 0.2446 0.2788 REMARK 3 9 1.8300 - 1.7600 1.00 2737 144 0.3234 0.3764 REMARK 3 10 1.7600 - 1.7000 1.00 2710 143 0.4214 0.4441 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.242 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1597 REMARK 3 ANGLE : 0.882 2177 REMARK 3 CHIRALITY : 0.045 245 REMARK 3 PLANARITY : 0.007 279 REMARK 3 DIHEDRAL : 13.632 615 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9567 7.1080 39.7154 REMARK 3 T TENSOR REMARK 3 T11: 0.4506 T22: 0.5663 REMARK 3 T33: 0.3943 T12: -0.0383 REMARK 3 T13: 0.0211 T23: 0.2082 REMARK 3 L TENSOR REMARK 3 L11: 3.8778 L22: 7.7024 REMARK 3 L33: 2.0831 L12: 1.8399 REMARK 3 L13: 0.3813 L23: 1.9470 REMARK 3 S TENSOR REMARK 3 S11: 0.0961 S12: 0.0708 S13: -0.2353 REMARK 3 S21: 0.4281 S22: -0.1508 S23: -0.1009 REMARK 3 S31: 0.4619 S32: -0.2681 S33: 0.0552 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9778 16.5916 28.8290 REMARK 3 T TENSOR REMARK 3 T11: 0.3096 T22: 0.4535 REMARK 3 T33: 0.4663 T12: -0.0330 REMARK 3 T13: -0.0392 T23: 0.1274 REMARK 3 L TENSOR REMARK 3 L11: 3.6984 L22: 3.4975 REMARK 3 L33: 2.2192 L12: -0.1708 REMARK 3 L13: -1.7263 L23: 0.6632 REMARK 3 S TENSOR REMARK 3 S11: -0.2329 S12: 0.0699 S13: -0.0927 REMARK 3 S21: -0.0206 S22: 0.0098 S23: 0.4559 REMARK 3 S31: -0.1274 S32: -0.5895 S33: 0.2574 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1651 13.5039 36.1634 REMARK 3 T TENSOR REMARK 3 T11: 0.3506 T22: 0.4131 REMARK 3 T33: 0.4335 T12: -0.0198 REMARK 3 T13: -0.0099 T23: 0.1655 REMARK 3 L TENSOR REMARK 3 L11: 2.9268 L22: 1.9526 REMARK 3 L33: 1.9123 L12: 0.5190 REMARK 3 L13: 0.4703 L23: -0.0843 REMARK 3 S TENSOR REMARK 3 S11: 0.1360 S12: -0.5247 S13: -0.5321 REMARK 3 S21: 0.2847 S22: -0.0973 S23: -0.1688 REMARK 3 S31: 0.0951 S32: -0.0793 S33: -0.0619 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4114 20.5097 36.1393 REMARK 3 T TENSOR REMARK 3 T11: 0.3728 T22: 0.4735 REMARK 3 T33: 0.4778 T12: -0.0451 REMARK 3 T13: -0.0593 T23: 0.1165 REMARK 3 L TENSOR REMARK 3 L11: 3.5899 L22: 5.2677 REMARK 3 L33: 3.2899 L12: -0.4578 REMARK 3 L13: 0.4207 L23: -0.7258 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: 0.1904 S13: -0.2056 REMARK 3 S21: -0.1327 S22: -0.1701 S23: -0.2253 REMARK 3 S31: -0.1826 S32: 0.3413 S33: 0.0922 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3204 14.5374 37.3109 REMARK 3 T TENSOR REMARK 3 T11: 0.2915 T22: 0.4874 REMARK 3 T33: 0.4925 T12: -0.0088 REMARK 3 T13: 0.0019 T23: 0.1820 REMARK 3 L TENSOR REMARK 3 L11: 3.1397 L22: 7.4668 REMARK 3 L33: 2.7606 L12: 1.7428 REMARK 3 L13: 0.6413 L23: -2.4864 REMARK 3 S TENSOR REMARK 3 S11: 0.1603 S12: -0.1035 S13: -0.4052 REMARK 3 S21: 0.4761 S22: 0.0746 S23: 0.6535 REMARK 3 S31: -0.0351 S32: -0.0104 S33: -0.2124 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6540 12.6376 26.9060 REMARK 3 T TENSOR REMARK 3 T11: 0.3023 T22: 0.3424 REMARK 3 T33: 0.4287 T12: 0.0232 REMARK 3 T13: 0.0478 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 2.9506 L22: 3.6970 REMARK 3 L33: 3.2037 L12: -0.0803 REMARK 3 L13: -0.5306 L23: -0.7585 REMARK 3 S TENSOR REMARK 3 S11: 0.1165 S12: -0.0079 S13: -0.5941 REMARK 3 S21: -0.5712 S22: -0.1167 S23: -0.3318 REMARK 3 S31: 0.1433 S32: 0.1301 S33: 0.0027 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9380 23.3931 26.4949 REMARK 3 T TENSOR REMARK 3 T11: 0.3490 T22: 0.3980 REMARK 3 T33: 0.3390 T12: 0.0141 REMARK 3 T13: 0.0426 T23: 0.1010 REMARK 3 L TENSOR REMARK 3 L11: 2.3702 L22: 2.0615 REMARK 3 L33: 0.9598 L12: 0.4230 REMARK 3 L13: -0.2344 L23: -0.1230 REMARK 3 S TENSOR REMARK 3 S11: 0.1862 S12: -0.1560 S13: 0.0480 REMARK 3 S21: 0.0667 S22: -0.0327 S23: 0.0878 REMARK 3 S31: -0.0961 S32: -0.2213 S33: -0.1427 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3017 28.5293 18.6909 REMARK 3 T TENSOR REMARK 3 T11: 0.4340 T22: 0.5276 REMARK 3 T33: 0.5439 T12: 0.0408 REMARK 3 T13: -0.0253 T23: 0.1819 REMARK 3 L TENSOR REMARK 3 L11: 7.3723 L22: 3.2938 REMARK 3 L33: 2.0249 L12: -2.0572 REMARK 3 L13: -3.4631 L23: 5.7741 REMARK 3 S TENSOR REMARK 3 S11: 0.2315 S12: 0.9506 S13: 0.5916 REMARK 3 S21: -0.7325 S22: -0.3467 S23: 1.0756 REMARK 3 S31: -0.8493 S32: -1.1677 S33: 0.0880 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5988 32.2028 23.3577 REMARK 3 T TENSOR REMARK 3 T11: 0.3685 T22: 0.3855 REMARK 3 T33: 0.2940 T12: 0.0651 REMARK 3 T13: 0.0835 T23: 0.1199 REMARK 3 L TENSOR REMARK 3 L11: 4.4651 L22: 7.1721 REMARK 3 L33: 5.6314 L12: 3.3327 REMARK 3 L13: 2.8211 L23: 3.8935 REMARK 3 S TENSOR REMARK 3 S11: -0.1866 S12: 0.0941 S13: 0.3664 REMARK 3 S21: -0.3966 S22: 0.1014 S23: 0.4472 REMARK 3 S31: -0.3528 S32: -0.1037 S33: 0.0675 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4041 28.3745 20.5904 REMARK 3 T TENSOR REMARK 3 T11: 0.3862 T22: 0.3432 REMARK 3 T33: 0.2981 T12: 0.0194 REMARK 3 T13: 0.1068 T23: 0.0657 REMARK 3 L TENSOR REMARK 3 L11: 3.4659 L22: 4.1938 REMARK 3 L33: 3.0522 L12: 0.9885 REMARK 3 L13: 1.7977 L23: 0.4034 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: 0.0957 S13: -0.1399 REMARK 3 S21: -0.2406 S22: -0.0381 S23: -0.2998 REMARK 3 S31: -0.1028 S32: 0.0030 S33: 0.0147 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 31LQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUN-26. REMARK 100 THE DEPOSITION ID IS D_1292157998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05965 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29330 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.86 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M CALCIUM ACETATE 0.1 M IMIDAZOLE REMARK 280 PH 8.0 35% (V/V) 2-ETHOXYETHANOL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.86000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.64000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.93000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.64000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 71.79000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.64000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.64000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.93000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.64000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.64000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 71.79000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 47.86000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -204.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 73.28000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 73.28000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 47.86000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 GLU A 189 REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 20 O HOH A 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 21 NE2 REMARK 620 2 HIS A 50 NE2 104.4 REMARK 620 3 ASP A 51 OD2 109.0 94.0 REMARK 620 4 ASP A 127 OD1 76.8 93.6 169.0 REMARK 620 5 HOH A 321 O 123.3 127.3 90.7 78.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 51 OD1 REMARK 620 2 HIS A 83 NE2 83.3 REMARK 620 3 HIS A 109 NE2 100.1 102.4 REMARK 620 4 ADP A 203 O2A 162.4 85.5 95.5 REMARK 620 5 HOH A 321 O 81.9 150.3 105.5 101.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 200 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 65 O REMARK 620 2 GLN A 68 O 82.3 REMARK 620 3 MET A 70 O 96.8 97.9 REMARK 620 4 ASN A 72 OD1 82.4 159.8 96.9 REMARK 620 5 HOH A 303 O 172.2 105.3 83.8 89.8 REMARK 620 6 HOH A 309 O 93.6 86.9 169.0 80.9 85.4 REMARK 620 N 1 2 3 4 5 DBREF1 31LQ A 2 189 UNP A0ABY9QA59_GEOTD DBREF2 31LQ A A0ABY9QA59 2 189 SEQADV 31LQ MET A 0 UNP A0ABY9QA5 INITIATING METHIONINE SEQADV 31LQ GLY A 1 UNP A0ABY9QA5 EXPRESSION TAG SEQADV 31LQ HIS A 190 UNP A0ABY9QA5 EXPRESSION TAG SEQADV 31LQ HIS A 191 UNP A0ABY9QA5 EXPRESSION TAG SEQADV 31LQ HIS A 192 UNP A0ABY9QA5 EXPRESSION TAG SEQADV 31LQ HIS A 193 UNP A0ABY9QA5 EXPRESSION TAG SEQADV 31LQ HIS A 194 UNP A0ABY9QA5 EXPRESSION TAG SEQADV 31LQ HIS A 195 UNP A0ABY9QA5 EXPRESSION TAG SEQRES 1 A 196 MET GLY GLU ARG GLU GLN ALA LEU ARG ILE VAL LYS GLU SEQRES 2 A 196 GLN LEU THR GLU HIS ARG TYR GLU HIS THR LEU GLY VAL SEQRES 3 A 196 VAL GLU THR ALA VAL LYS LEU ALA GLU ARG TYR GLY ALA SEQRES 4 A 196 ASP VAL LYS LYS ALA GLU LEU ALA ALA ILE PHE HIS ASP SEQRES 5 A 196 TYR ALA LYS PHE ARG PRO VAL GLU GLU MET LYS GLN LEU SEQRES 6 A 196 ILE LEU ALA GLN ASN MET PRO ASN ASP LEU LEU VAL TYR SEQRES 7 A 196 ASN SER GLU LEU TRP HIS ALA PRO VAL GLY ALA TYR LEU SEQRES 8 A 196 VAL GLN THR GLU VAL GLY LEU ASP ASP PRO GLU VAL LEU SEQRES 9 A 196 ASP ALA ILE ARG TYR HIS THR SER GLY ARG ALA GLY MET SEQRES 10 A 196 THR LEU LEU GLU LYS ILE ILE TYR LEU ALA ASP TYR ILE SEQRES 11 A 196 GLU PRO GLY ARG ARG PHE PRO GLY VAL ASP ASP VAL ARG SEQRES 12 A 196 ARG LEU ALA GLU GLU ASP LEU ASN ARG ALA LEU LEU GLN SEQRES 13 A 196 ALA VAL LYS ASN THR ILE ALA PHE LEU LEU GLU LYS GLY SEQRES 14 A 196 GLN LEU ILE TYR PRO ASP THR ILE HIS ALA TYR ASN SER SEQRES 15 A 196 LEU VAL ARG GLU VAL LYS GLY GLU HIS HIS HIS HIS HIS SEQRES 16 A 196 HIS HET CA A 200 1 HET ZN A 201 1 HET ZN A 202 1 HET ADP A 203 27 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 CA CA 2+ FORMUL 3 ZN 2(ZN 2+) FORMUL 5 ADP C10 H15 N5 O10 P2 FORMUL 6 HOH *70(H2 O) HELIX 1 AA1 GLU A 2 LEU A 14 1 13 HELIX 2 AA2 THR A 15 GLY A 37 1 23 HELIX 3 AA3 ASP A 39 HIS A 50 1 12 HELIX 4 AA4 PRO A 57 GLN A 68 1 12 HELIX 5 AA5 PRO A 71 TYR A 77 5 7 HELIX 6 AA6 ASN A 78 LEU A 81 5 4 HELIX 7 AA7 TRP A 82 GLY A 96 1 15 HELIX 8 AA8 ASP A 99 TYR A 108 1 10 HELIX 9 AA9 THR A 117 GLU A 130 1 14 HELIX 10 AB1 GLY A 137 GLU A 146 1 10 HELIX 11 AB2 ASP A 148 LYS A 167 1 20 HELIX 12 AB3 TYR A 172 GLY A 188 1 17 LINK NE2 HIS A 21 ZN ZN A 201 1555 1555 2.23 LINK NE2 HIS A 50 ZN ZN A 201 1555 1555 2.28 LINK OD2 ASP A 51 ZN ZN A 201 1555 1555 2.50 LINK OD1 ASP A 51 ZN ZN A 202 1555 1555 2.48 LINK O ILE A 65 CA CA A 200 1555 1555 2.37 LINK O GLN A 68 CA CA A 200 1555 1555 2.27 LINK O MET A 70 CA CA A 200 1555 1555 2.33 LINK OD1 ASN A 72 CA CA A 200 1555 1555 2.42 LINK NE2 HIS A 83 ZN ZN A 202 1555 1555 2.33 LINK NE2 HIS A 109 ZN ZN A 202 1555 1555 2.37 LINK OD1 ASP A 127 ZN ZN A 201 1555 1555 2.40 LINK CA CA A 200 O HOH A 303 1555 6555 2.48 LINK CA CA A 200 O HOH A 309 1555 1555 2.44 LINK ZN ZN A 201 O HOH A 321 1555 1555 1.85 LINK ZN ZN A 202 O2A ADP A 203 1555 1555 2.37 LINK ZN ZN A 202 O HOH A 321 1555 1555 2.30 CRYST1 73.280 73.280 95.720 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013646 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013646 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010447 0.00000 CONECT 180 1538 CONECT 398 1538 CONECT 405 1539 CONECT 406 1538 CONECT 524 1537 CONECT 545 1537 CONECT 563 1537 CONECT 585 1537 CONECT 684 1539 CONECT 889 1539 CONECT 1023 1538 CONECT 1537 524 545 563 585 CONECT 1537 1575 CONECT 1538 180 398 406 1023 CONECT 1538 1587 CONECT 1539 405 684 889 1546 CONECT 1539 1587 CONECT 1540 1541 1542 1543 1547 CONECT 1541 1540 CONECT 1542 1540 CONECT 1543 1540 CONECT 1544 1545 1546 1547 1548 CONECT 1545 1544 CONECT 1546 1539 1544 CONECT 1547 1540 1544 CONECT 1548 1544 1549 CONECT 1549 1548 1550 CONECT 1550 1549 1551 1552 CONECT 1551 1550 1556 CONECT 1552 1550 1553 1554 CONECT 1553 1552 CONECT 1554 1552 1555 1556 CONECT 1555 1554 CONECT 1556 1551 1554 1557 CONECT 1557 1556 1558 1566 CONECT 1558 1557 1559 CONECT 1559 1558 1560 CONECT 1560 1559 1561 1566 CONECT 1561 1560 1562 1563 CONECT 1562 1561 CONECT 1563 1561 1564 CONECT 1564 1563 1565 CONECT 1565 1564 1566 CONECT 1566 1557 1560 1565 CONECT 1575 1537 CONECT 1587 1538 1539 MASTER 432 0 4 12 0 0 0 6 1607 1 46 16 END