HEADER IMMUNE SYSTEM 12-JUL-26 32JE TITLE NANOBODY NB1 AGAINST SOG1 NAC DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NANOBODY NB1 AGAINST SOG1 NAC DOMAIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_TAXID: 9844; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NANOBODY, SOG1, DNA DAMAGE RESPONSE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.LORIS,L.VAN DEN HAUTE,K.MIGNON REVDAT 1 26-AUG-26 32JE 0 JRNL AUTH K.MIGNON,L.VAN DEN HAUTE,R.VAN DER EECKEN,M.FISLAGE, JRNL AUTH 2 E.PARDON,J.STEYAERT,R.LORIS JRNL TITL A NANOBODY AND MEGABODY TOOLBOX FOR SOG1, THE CENTRAL JRNL TITL 2 REGULATOR OF THE PLANT DNA DAMAGE RESPONSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.1_5286 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 13442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.0600 - 3.9300 0.98 2640 140 0.1839 0.2458 REMARK 3 2 3.9300 - 3.1200 0.99 2560 135 0.1824 0.2417 REMARK 3 3 3.1200 - 2.7300 1.00 2537 134 0.2298 0.2871 REMARK 3 4 2.7300 - 2.4800 0.99 2522 133 0.2575 0.3610 REMARK 3 5 2.4800 - 2.3000 1.00 2509 132 0.2760 0.3452 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.331 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1921 REMARK 3 ANGLE : 0.942 2614 REMARK 3 CHIRALITY : 0.060 287 REMARK 3 PLANARITY : 0.007 335 REMARK 3 DIHEDRAL : 12.910 658 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8922 -11.2318 -5.8235 REMARK 3 T TENSOR REMARK 3 T11: 0.3404 T22: 0.3074 REMARK 3 T33: 0.5028 T12: -0.0619 REMARK 3 T13: 0.0239 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 6.4618 L22: 2.3274 REMARK 3 L33: 5.6280 L12: -3.4553 REMARK 3 L13: 6.0528 L23: -3.1008 REMARK 3 S TENSOR REMARK 3 S11: 0.1580 S12: -0.9426 S13: 0.7998 REMARK 3 S21: 0.4239 S22: -0.2007 S23: -0.4660 REMARK 3 S31: 0.1018 S32: -0.2281 S33: 0.3606 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7240 -10.9883 8.1540 REMARK 3 T TENSOR REMARK 3 T11: 0.3373 T22: 0.3076 REMARK 3 T33: 0.4620 T12: -0.1002 REMARK 3 T13: -0.0949 T23: 0.0770 REMARK 3 L TENSOR REMARK 3 L11: 7.7116 L22: 1.0563 REMARK 3 L33: 7.4293 L12: -0.4368 REMARK 3 L13: -3.6251 L23: -1.2972 REMARK 3 S TENSOR REMARK 3 S11: 0.1939 S12: -0.8020 S13: -0.5025 REMARK 3 S21: -0.2733 S22: -0.8832 S23: 0.0165 REMARK 3 S31: 0.8288 S32: 0.6718 S33: 0.3361 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4363 -15.7624 -10.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.2738 T22: 0.2904 REMARK 3 T33: 0.2677 T12: -0.0213 REMARK 3 T13: 0.0565 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 4.4910 L22: 0.9415 REMARK 3 L33: 2.9947 L12: 1.6398 REMARK 3 L13: 3.4680 L23: 1.6566 REMARK 3 S TENSOR REMARK 3 S11: 0.2364 S12: -0.0492 S13: -0.4650 REMARK 3 S21: 0.1496 S22: -0.0738 S23: 0.0996 REMARK 3 S31: 0.5470 S32: -0.2000 S33: -0.1500 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7837 -2.6258 -5.9708 REMARK 3 T TENSOR REMARK 3 T11: 0.3611 T22: 0.2992 REMARK 3 T33: 0.2971 T12: -0.0045 REMARK 3 T13: -0.0878 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 1.4168 L22: 2.9997 REMARK 3 L33: 4.3575 L12: 2.0262 REMARK 3 L13: 1.5782 L23: 2.9369 REMARK 3 S TENSOR REMARK 3 S11: 0.4044 S12: -0.1409 S13: 0.0854 REMARK 3 S21: 1.5058 S22: -0.0167 S23: -0.5095 REMARK 3 S31: 0.9703 S32: 0.0050 S33: -0.1944 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1167 -12.6897 -14.2350 REMARK 3 T TENSOR REMARK 3 T11: 0.2761 T22: 0.2937 REMARK 3 T33: 0.2654 T12: 0.0086 REMARK 3 T13: -0.0136 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 6.6579 L22: 8.1158 REMARK 3 L33: 6.8555 L12: 4.5080 REMARK 3 L13: -0.8793 L23: 3.2960 REMARK 3 S TENSOR REMARK 3 S11: -0.5012 S12: 0.5225 S13: -0.2927 REMARK 3 S21: -0.6346 S22: 0.7309 S23: -0.2334 REMARK 3 S31: -0.6157 S32: 0.4069 S33: -0.2078 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7833 -13.0966 -7.7649 REMARK 3 T TENSOR REMARK 3 T11: 0.2820 T22: 0.2634 REMARK 3 T33: 0.3388 T12: 0.0425 REMARK 3 T13: -0.0071 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 8.7713 L22: 7.3001 REMARK 3 L33: 3.7727 L12: 4.5039 REMARK 3 L13: 2.0242 L23: 1.8951 REMARK 3 S TENSOR REMARK 3 S11: 0.2036 S12: -0.3111 S13: -0.5939 REMARK 3 S21: -0.2090 S22: -0.1323 S23: -0.8546 REMARK 3 S31: 0.0707 S32: 0.1520 S33: -0.1888 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4423 -11.5000 -3.8767 REMARK 3 T TENSOR REMARK 3 T11: 0.2627 T22: 0.2292 REMARK 3 T33: 0.2772 T12: -0.0239 REMARK 3 T13: -0.0037 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 1.9077 L22: 0.4301 REMARK 3 L33: 4.2460 L12: 0.5380 REMARK 3 L13: 0.9104 L23: 0.6535 REMARK 3 S TENSOR REMARK 3 S11: 0.0948 S12: -0.1835 S13: -0.1021 REMARK 3 S21: 0.2319 S22: -0.0192 S23: -0.1013 REMARK 3 S31: -0.2062 S32: 0.2026 S33: -0.0618 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2260 -9.2870 -20.9666 REMARK 3 T TENSOR REMARK 3 T11: 0.3638 T22: 0.3755 REMARK 3 T33: 0.5287 T12: 0.0758 REMARK 3 T13: -0.0326 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.5613 L22: 6.0389 REMARK 3 L33: 4.4086 L12: -3.2613 REMARK 3 L13: -0.9554 L23: -2.4330 REMARK 3 S TENSOR REMARK 3 S11: 0.0980 S12: 1.1863 S13: -0.0378 REMARK 3 S21: -0.9990 S22: 0.2537 S23: -0.2397 REMARK 3 S31: 0.1887 S32: -0.0534 S33: -0.0260 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7333 -5.5886 -3.5151 REMARK 3 T TENSOR REMARK 3 T11: 0.2256 T22: 0.3451 REMARK 3 T33: 0.3788 T12: -0.1085 REMARK 3 T13: -0.0596 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 1.7296 L22: 2.7850 REMARK 3 L33: 2.4347 L12: -2.2001 REMARK 3 L13: -0.0005 L23: -0.3355 REMARK 3 S TENSOR REMARK 3 S11: -0.1881 S12: -0.1129 S13: 0.2697 REMARK 3 S21: 0.3452 S22: -0.0837 S23: 0.1384 REMARK 3 S31: 0.2955 S32: -0.4384 S33: 0.4470 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3029 -18.8280 14.1876 REMARK 3 T TENSOR REMARK 3 T11: 0.3126 T22: 0.3634 REMARK 3 T33: 0.3875 T12: 0.0094 REMARK 3 T13: 0.0513 T23: -0.0372 REMARK 3 L TENSOR REMARK 3 L11: 5.2705 L22: 9.0345 REMARK 3 L33: 7.0340 L12: -5.1574 REMARK 3 L13: 3.9502 L23: -4.9002 REMARK 3 S TENSOR REMARK 3 S11: -0.3021 S12: 0.1686 S13: 0.6837 REMARK 3 S21: 0.2555 S22: 0.1435 S23: 0.3377 REMARK 3 S31: -0.2936 S32: 0.0355 S33: 0.0543 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7494 -7.2547 6.1733 REMARK 3 T TENSOR REMARK 3 T11: 0.4054 T22: 0.2888 REMARK 3 T33: 0.6556 T12: 0.0619 REMARK 3 T13: 0.0408 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 3.3326 L22: 1.1765 REMARK 3 L33: 4.7336 L12: -1.4959 REMARK 3 L13: -1.7549 L23: 1.2883 REMARK 3 S TENSOR REMARK 3 S11: 0.8462 S12: 0.8666 S13: 2.0938 REMARK 3 S21: -1.5710 S22: -0.4139 S23: -0.3981 REMARK 3 S31: -0.3982 S32: -0.1490 S33: -0.3516 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5223 -18.9142 8.8818 REMARK 3 T TENSOR REMARK 3 T11: 0.2359 T22: 0.3650 REMARK 3 T33: 0.3973 T12: -0.0157 REMARK 3 T13: -0.0425 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 8.7649 L22: 2.9625 REMARK 3 L33: 9.2023 L12: -3.5409 REMARK 3 L13: 6.9613 L23: -5.2020 REMARK 3 S TENSOR REMARK 3 S11: 0.4000 S12: 1.4612 S13: 0.8263 REMARK 3 S21: -0.3699 S22: -0.6034 S23: -0.0646 REMARK 3 S31: 0.5369 S32: 0.6937 S33: 0.5064 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8075 -20.5148 19.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.2503 T22: 0.2834 REMARK 3 T33: 0.2631 T12: -0.0220 REMARK 3 T13: -0.0156 T23: 0.0633 REMARK 3 L TENSOR REMARK 3 L11: 1.1711 L22: 2.0806 REMARK 3 L33: 1.1133 L12: 0.8528 REMARK 3 L13: -0.2589 L23: 0.8303 REMARK 3 S TENSOR REMARK 3 S11: 0.0319 S12: -0.1213 S13: -0.1113 REMARK 3 S21: -0.2653 S22: -0.0610 S23: 0.1181 REMARK 3 S31: -0.1873 S32: 0.1837 S33: 0.0003 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1647 -26.5374 17.8083 REMARK 3 T TENSOR REMARK 3 T11: 0.2734 T22: 0.2546 REMARK 3 T33: 0.3275 T12: -0.0062 REMARK 3 T13: -0.0237 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 3.2710 L22: 7.5276 REMARK 3 L33: 2.8702 L12: -2.6562 REMARK 3 L13: -1.5228 L23: 2.0665 REMARK 3 S TENSOR REMARK 3 S11: 0.1986 S12: 0.1731 S13: -0.4705 REMARK 3 S21: -0.1132 S22: -0.4616 S23: 1.0956 REMARK 3 S31: -0.1888 S32: -0.1012 S33: 0.1526 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8377 -22.4112 11.3937 REMARK 3 T TENSOR REMARK 3 T11: 0.2932 T22: 0.2927 REMARK 3 T33: 0.4264 T12: 0.0480 REMARK 3 T13: -0.0396 T23: -0.0420 REMARK 3 L TENSOR REMARK 3 L11: 3.6383 L22: 2.6573 REMARK 3 L33: 1.4194 L12: -1.0551 REMARK 3 L13: -1.2903 L23: 0.8177 REMARK 3 S TENSOR REMARK 3 S11: 0.2268 S12: 0.2348 S13: 0.1093 REMARK 3 S21: -0.1451 S22: -0.1994 S23: 0.3698 REMARK 3 S31: -0.2197 S32: -0.2708 S33: 0.0092 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 85 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5739 -10.0756 12.2295 REMARK 3 T TENSOR REMARK 3 T11: 0.3410 T22: 0.2918 REMARK 3 T33: 0.5787 T12: 0.0435 REMARK 3 T13: 0.0279 T23: 0.0260 REMARK 3 L TENSOR REMARK 3 L11: 5.2708 L22: 2.1219 REMARK 3 L33: 8.8044 L12: 2.2628 REMARK 3 L13: 2.0041 L23: 1.4296 REMARK 3 S TENSOR REMARK 3 S11: 0.4963 S12: -0.3054 S13: -0.2868 REMARK 3 S21: 0.1043 S22: -0.0646 S23: 0.5617 REMARK 3 S31: -0.8188 S32: -0.9150 S33: -0.5027 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 93 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4903 -17.0538 18.5965 REMARK 3 T TENSOR REMARK 3 T11: 0.2796 T22: 0.2503 REMARK 3 T33: 0.4615 T12: 0.0005 REMARK 3 T13: 0.0118 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 5.8004 L22: 4.3807 REMARK 3 L33: 5.3029 L12: -4.7811 REMARK 3 L13: 3.1431 L23: -3.7686 REMARK 3 S TENSOR REMARK 3 S11: 0.6523 S12: 0.2944 S13: -0.2763 REMARK 3 S21: -0.7475 S22: -0.9006 S23: 0.1030 REMARK 3 S31: 0.3623 S32: 0.4026 S33: 0.4224 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 101 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8137 -30.1954 24.2965 REMARK 3 T TENSOR REMARK 3 T11: 0.3986 T22: 0.4230 REMARK 3 T33: 0.4604 T12: -0.0362 REMARK 3 T13: 0.0792 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.5583 L22: 5.7261 REMARK 3 L33: 5.4321 L12: -3.4184 REMARK 3 L13: -1.1364 L23: 0.1342 REMARK 3 S TENSOR REMARK 3 S11: -0.0580 S12: 0.1322 S13: -0.8025 REMARK 3 S21: 0.2155 S22: 0.0009 S23: 0.4879 REMARK 3 S31: 0.6541 S32: -0.0563 S33: 0.1136 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5813 -13.7040 17.4817 REMARK 3 T TENSOR REMARK 3 T11: 0.3687 T22: 0.3091 REMARK 3 T33: 0.3032 T12: 0.0140 REMARK 3 T13: -0.0305 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 5.3661 L22: 7.6012 REMARK 3 L33: 3.7920 L12: -3.9934 REMARK 3 L13: 2.8813 L23: -3.8401 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.4664 S13: 0.9067 REMARK 3 S21: 0.4416 S22: -0.2344 S23: -0.8546 REMARK 3 S31: -0.2058 S32: -0.0267 S33: 0.1888 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 1 through 85 or REMARK 3 resid 87 through 101 or (resid 102 REMARK 3 through 105 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 106 through 113 or (resid 114 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 115 through 127)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 1 through 19 or REMARK 3 (resid 20 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD or name NE )) or resid 21 through 85 REMARK 3 or resid 87 through 127)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 32JE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUL-26. REMARK 100 THE DEPOSITION ID IS D_1292158931. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-26 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978564 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13474 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 45.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.240 REMARK 200 R MERGE (I) : 0.25500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.36 REMARK 200 R MERGE FOR SHELL (I) : 1.16300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.110 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-HEPES PH 7.5, 2% V/V PEG-400, REMARK 280 2.0 M (NH4)2SO4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.82900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.74450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.07600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.74450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.82900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.07600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 128 REMARK 465 ALA A 129 REMARK 465 ALA A 130 REMARK 465 ALA A 131 REMARK 465 TYR A 132 REMARK 465 PRO A 133 REMARK 465 TYR A 134 REMARK 465 ASP A 135 REMARK 465 VAL A 136 REMARK 465 PRO A 137 REMARK 465 ASP A 138 REMARK 465 TYR A 139 REMARK 465 GLY A 140 REMARK 465 SER A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 SER B 128 REMARK 465 ALA B 129 REMARK 465 ALA B 130 REMARK 465 ALA B 131 REMARK 465 TYR B 132 REMARK 465 PRO B 133 REMARK 465 TYR B 134 REMARK 465 ASP B 135 REMARK 465 VAL B 136 REMARK 465 PRO B 137 REMARK 465 ASP B 138 REMARK 465 TYR B 139 REMARK 465 GLY B 140 REMARK 465 SER B 141 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 N CB CG SD CE REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 GLN A 4 OE1 NE2 REMARK 470 ARG A 20 CZ NH1 NH2 REMARK 470 LYS A 44 CE NZ REMARK 470 LYS A 77 CD CE NZ REMARK 470 ARG A 102 NE CZ NH1 NH2 REMARK 470 GLU A 114 OE1 OE2 REMARK 470 GLN A 120 CD OE1 NE2 REMARK 470 SER A 127 OG REMARK 470 MET B 1 N CB CG SD CE REMARK 470 GLN B 2 CG CD OE1 NE2 REMARK 470 GLN B 4 OE1 NE2 REMARK 470 LYS B 44 CE NZ REMARK 470 LYS B 77 CD CE NZ REMARK 470 ARG B 102 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 470 GLN B 120 CD OE1 NE2 REMARK 470 SER B 127 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 341 O HOH B 348 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 97 CB CYS A 97 SG -0.105 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 2 165.33 179.81 REMARK 500 PHE A 106 -33.02 64.71 REMARK 500 GLN B 2 165.52 179.98 REMARK 500 PHE B 106 -32.82 65.96 REMARK 500 REMARK 500 REMARK: NULL DBREF 32JE A 1 147 PDB 32JE 32JE 1 147 DBREF 32JE B 1 147 PDB 32JE 32JE 1 147 SEQRES 1 A 147 MET GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 A 147 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 A 147 GLU PHE ILE PHE SER GLY TYR ALA MET SER TRP PHE ARG SEQRES 4 A 147 GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE SEQRES 5 A 147 SER ARG GLY GLY SER SER ILE SER TYR THR ASP SER VAL SEQRES 6 A 147 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 A 147 THR LEU TYR LEU GLN MET ASN ASN LEU LYS PRO ASP ASP SEQRES 8 A 147 THR ALA VAL TYR TYR CYS ALA LYS SER THR ARG ALA ALA SEQRES 9 A 147 ALA PHE VAL VAL PRO THR PRO THR THR GLU TYR ASP SER SEQRES 10 A 147 TRP GLY GLN GLY THR GLN VAL THR VAL SER SER ALA ALA SEQRES 11 A 147 ALA TYR PRO TYR ASP VAL PRO ASP TYR GLY SER HIS HIS SEQRES 12 A 147 HIS HIS HIS HIS SEQRES 1 B 147 MET GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 B 147 GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 B 147 GLU PHE ILE PHE SER GLY TYR ALA MET SER TRP PHE ARG SEQRES 4 B 147 GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE SEQRES 5 B 147 SER ARG GLY GLY SER SER ILE SER TYR THR ASP SER VAL SEQRES 6 B 147 LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SEQRES 7 B 147 THR LEU TYR LEU GLN MET ASN ASN LEU LYS PRO ASP ASP SEQRES 8 B 147 THR ALA VAL TYR TYR CYS ALA LYS SER THR ARG ALA ALA SEQRES 9 B 147 ALA PHE VAL VAL PRO THR PRO THR THR GLU TYR ASP SER SEQRES 10 B 147 TRP GLY GLN GLY THR GLN VAL THR VAL SER SER ALA ALA SEQRES 11 B 147 ALA TYR PRO TYR ASP VAL PRO ASP TYR GLY SER HIS HIS SEQRES 12 B 147 HIS HIS HIS HIS HET SO4 A 201 5 HET CL A 202 1 HET CL A 203 1 HET CL A 204 1 HET SO4 B 201 5 HET CL B 202 1 HET CL B 203 1 HET CL B 204 1 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL 6(CL 1-) FORMUL 11 HOH *112(H2 O) HELIX 1 AA1 ILE A 29 TYR A 33 5 5 HELIX 2 AA2 LYS A 88 THR A 92 5 5 HELIX 3 AA3 ILE B 29 TYR B 33 5 5 HELIX 4 AA4 LYS B 88 THR B 92 5 5 SHEET 1 AA1 4 GLN A 4 SER A 8 0 SHEET 2 AA1 4 LEU A 19 SER A 26 -1 O ALA A 24 N GLN A 6 SHEET 3 AA1 4 THR A 79 MET A 84 -1 O MET A 84 N LEU A 19 SHEET 4 AA1 4 PHE A 69 ASP A 74 -1 N SER A 72 O TYR A 81 SHEET 1 AA2 6 LEU A 12 VAL A 13 0 SHEET 2 AA2 6 THR A 122 VAL A 126 1 O THR A 125 N VAL A 13 SHEET 3 AA2 6 ALA A 93 SER A 100 -1 N TYR A 95 O THR A 122 SHEET 4 AA2 6 MET A 35 GLN A 40 -1 N PHE A 38 O TYR A 96 SHEET 5 AA2 6 GLU A 47 ILE A 52 -1 O GLU A 47 N ARG A 39 SHEET 6 AA2 6 ILE A 59 TYR A 61 -1 O SER A 60 N GLY A 51 SHEET 1 AA3 4 LEU A 12 VAL A 13 0 SHEET 2 AA3 4 THR A 122 VAL A 126 1 O THR A 125 N VAL A 13 SHEET 3 AA3 4 ALA A 93 SER A 100 -1 N TYR A 95 O THR A 122 SHEET 4 AA3 4 TYR A 115 TRP A 118 -1 O SER A 117 N LYS A 99 SHEET 1 AA4 4 GLN B 4 SER B 8 0 SHEET 2 AA4 4 LEU B 19 SER B 26 -1 O SER B 22 N SER B 8 SHEET 3 AA4 4 THR B 79 MET B 84 -1 O MET B 84 N LEU B 19 SHEET 4 AA4 4 PHE B 69 ASP B 74 -1 N SER B 72 O TYR B 81 SHEET 1 AA5 6 GLY B 11 VAL B 13 0 SHEET 2 AA5 6 THR B 122 VAL B 126 1 O THR B 125 N VAL B 13 SHEET 3 AA5 6 ALA B 93 SER B 100 -1 N TYR B 95 O THR B 122 SHEET 4 AA5 6 MET B 35 GLN B 40 -1 N PHE B 38 O TYR B 96 SHEET 5 AA5 6 GLU B 47 ILE B 52 -1 O VAL B 49 N TRP B 37 SHEET 6 AA5 6 ILE B 59 TYR B 61 -1 O SER B 60 N GLY B 51 SHEET 1 AA6 4 GLY B 11 VAL B 13 0 SHEET 2 AA6 4 THR B 122 VAL B 126 1 O THR B 125 N VAL B 13 SHEET 3 AA6 4 ALA B 93 SER B 100 -1 N TYR B 95 O THR B 122 SHEET 4 AA6 4 TYR B 115 TRP B 118 -1 O SER B 117 N LYS B 99 SSBOND 1 CYS A 23 CYS A 97 1555 1555 2.02 SSBOND 2 CYS B 23 CYS B 97 1555 1555 2.01 CRYST1 51.658 92.152 61.489 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019358 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010852 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016263 0.00000 MTRIX1 1 -0.999940 -0.010266 0.003897 22.18237 1 MTRIX2 1 -0.002742 0.577109 0.816662 -7.54903 1 MTRIX3 1 -0.010633 0.816602 -0.577103 20.11122 1 CONECT 147 721 CONECT 721 147 CONECT 1084 1663 CONECT 1663 1084 CONECT 1873 1874 1875 1876 1877 CONECT 1874 1873 CONECT 1875 1873 CONECT 1876 1873 CONECT 1877 1873 CONECT 1881 1882 1883 1884 1885 CONECT 1882 1881 CONECT 1883 1881 CONECT 1884 1881 CONECT 1885 1881 MASTER 626 0 8 4 28 0 0 9 1993 2 14 24 END