data_354D
# 
_entry.id   354D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   354D         pdb_0000354d 10.2210/pdb354d/pdb 
RCSB  URL064       ?            ?                   
WWPDB D_1000178823 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1997-11-26 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2015-02-18 
5 'Structure model' 1 4 2024-02-21 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Non-polymer description'   
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Database references'       
6 5 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 5 'Structure model' chem_comp_atom         
2 5 'Structure model' chem_comp_bond         
3 5 'Structure model' database_2             
4 5 'Structure model' pdbx_struct_conn_angle 
5 5 'Structure model' struct_conn            
6 5 'Structure model' struct_conn_type       
7 5 'Structure model' struct_site            
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  5 'Structure model' '_database_2.pdbx_DOI'                        
2  5 'Structure model' '_database_2.pdbx_database_accession'         
3  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
4  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
5  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
6  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
7  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
8  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
9  5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'   
11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 
12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'  
14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 
17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 
18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
19 5 'Structure model' '_pdbx_struct_conn_angle.value'               
20 5 'Structure model' '_struct_conn.conn_type_id'                   
21 5 'Structure model' '_struct_conn.id'                             
22 5 'Structure model' '_struct_conn.pdbx_dist_value'                
23 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'         
24 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
31 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
37 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'             
38 5 'Structure model' '_struct_conn_type.id'                        
39 5 'Structure model' '_struct_site.pdbx_auth_asym_id'              
40 5 'Structure model' '_struct_site.pdbx_auth_comp_id'              
41 5 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        354D 
_pdbx_database_status.recvd_initial_deposition_date   1997-10-01 
_pdbx_database_status.deposit_site                    NDB 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Correll, C.C.' 1 
'Freeborn, B.'  2 
'Moore, P.B.'   3 
'Steitz, T.A.'  4 
# 
loop_
_citation.id 
_citation.title 
_citation.journal_abbrev 
_citation.journal_volume 
_citation.page_first 
_citation.page_last 
_citation.year 
_citation.journal_id_ASTM 
_citation.country 
_citation.journal_id_ISSN 
_citation.journal_id_CSD 
_citation.book_publisher 
_citation.pdbx_database_id_PubMed 
_citation.pdbx_database_id_DOI 
primary 'Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain.' 'Cell(Cambridge,Mass.)' 91 705 712 1997 
CELLB5 US 0092-8674 0998 ? 9393863 '10.1016/S0092-8674(00)80457-2' 
1       
;Use of Chemically Modified Nucleotides to Determine a 62-Nucleotide RNA Crystal Structure: A Survey of Phosphorothioates, Br, Pt, and Hg
;
J.Biomol.Struct.Dyn.    15 165 172 1997 JBSDD6 US 0739-1102 0646 ? ?       ?                               
2       'The Solution Structure of the Loop E/Loop D Region of E. coli 5S rRNA' 'To be Published'       ?  ?   ?   ?    ?      ?  
?         0353 ? ?       ?                               
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Correll, C.C.' 1  ? 
primary 'Freeborn, B.'  2  ? 
primary 'Moore, P.B.'   3  ? 
primary 'Steitz, T.A.'  4  ? 
1       'Correll, C.C.' 5  ? 
1       'Freeborn, B.'  6  ? 
1       'Moore, P.B.'   7  ? 
1       'Steitz, T.A.'  8  ? 
2       'Dallas, A.'    9  ? 
2       'Moore, P.B.'   10 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     man 
;RNA (5'-R(*CP*CP*GP*AP*UP*GP*GP*UP*AP*GP*UP*G)-3')
;
3868.344 1   ? ? ? ? 
2 polymer     man 
;RNA-DNA (5'-R(*GP*CP*GP*AP*GP*AP*GP*UP*AP*)-D(*DGP(S)*)-R(*GP*C)-3')
;
3930.489 1   ? ? ? ? 
3 non-polymer syn 'MAGNESIUM ION'                                                        24.305   5   ? ? ? ? 
4 water       nat water                                                                  18.015   124 ? ? ? ? 
# 
_entity_keywords.entity_id   2 
_entity_keywords.text        'MUTANT: G107 IS MUTATED TO C' 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polyribonucleotide no no  CCGAUGGUAGUG          CCGAUGGUAGUG A ? 
2 polyribonucleotide no yes 'GCGAGAGUA(DG)(G46)C' GCGAGAGUAGGC B ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
3 'MAGNESIUM ION' MG  
4 water           HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  C   n 
1 2  C   n 
1 3  G   n 
1 4  A   n 
1 5  U   n 
1 6  G   n 
1 7  G   n 
1 8  U   n 
1 9  A   n 
1 10 G   n 
1 11 U   n 
1 12 G   n 
2 1  G   n 
2 2  C   n 
2 3  G   n 
2 4  A   n 
2 5  G   n 
2 6  A   n 
2 7  G   n 
2 8  U   n 
2 9  A   n 
2 10 DG  n 
2 11 G46 n 
2 12 C   n 
# 
loop_
_entity_src_gen.entity_id 
_entity_src_gen.pdbx_src_id 
_entity_src_gen.pdbx_alt_source_flag 
_entity_src_gen.pdbx_seq_type 
_entity_src_gen.pdbx_beg_seq_num 
_entity_src_gen.pdbx_end_seq_num 
_entity_src_gen.gene_src_common_name 
_entity_src_gen.gene_src_genus 
_entity_src_gen.pdbx_gene_src_gene 
_entity_src_gen.gene_src_species 
_entity_src_gen.gene_src_strain 
_entity_src_gen.gene_src_tissue 
_entity_src_gen.gene_src_tissue_fraction 
_entity_src_gen.gene_src_details 
_entity_src_gen.pdbx_gene_src_fragment 
_entity_src_gen.pdbx_gene_src_scientific_name 
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 
_entity_src_gen.pdbx_gene_src_variant 
_entity_src_gen.pdbx_gene_src_cell_line 
_entity_src_gen.pdbx_gene_src_atcc 
_entity_src_gen.pdbx_gene_src_organ 
_entity_src_gen.pdbx_gene_src_organelle 
_entity_src_gen.pdbx_gene_src_cell 
_entity_src_gen.pdbx_gene_src_cellular_location 
_entity_src_gen.host_org_common_name 
_entity_src_gen.pdbx_host_org_scientific_name 
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 
_entity_src_gen.host_org_genus 
_entity_src_gen.pdbx_host_org_gene 
_entity_src_gen.pdbx_host_org_organ 
_entity_src_gen.host_org_species 
_entity_src_gen.pdbx_host_org_tissue 
_entity_src_gen.pdbx_host_org_tissue_fraction 
_entity_src_gen.pdbx_host_org_strain 
_entity_src_gen.pdbx_host_org_variant 
_entity_src_gen.pdbx_host_org_cell_line 
_entity_src_gen.pdbx_host_org_atcc 
_entity_src_gen.pdbx_host_org_culture_collection 
_entity_src_gen.pdbx_host_org_cell 
_entity_src_gen.pdbx_host_org_organelle 
_entity_src_gen.pdbx_host_org_cellular_location 
_entity_src_gen.pdbx_host_org_vector_type 
_entity_src_gen.pdbx_host_org_vector 
_entity_src_gen.host_org_details 
_entity_src_gen.expression_system_id 
_entity_src_gen.plasmid_name 
_entity_src_gen.plasmid_details 
_entity_src_gen.pdbx_description 
1 1 sample ? ? ? ? Escherichia ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? 
? ? ? ? ? CYTOSOL ? ? ? ? ? ? ? ? 
2 1 sample ? ? ? ? Escherichia ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? 
? ? ? ? ? CYTOSOL ? ? ? ? ? ? ? ? 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A   'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE"         ?                             'C10 H14 N5 O7 P'   347.221 
C   'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE"          ?                             'C9 H14 N3 O8 P'    323.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?                             'C10 H14 N5 O7 P'   347.221 
G   'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE"         ?                             'C10 H14 N5 O8 P'   363.221 
G46 'RNA linking' n "GUANOSINE-5'-MONOTHIOPHOSPHATE"     "5'-O-thiophosphonoguanosine" 'C10 H14 N5 O7 P S' 379.286 
HOH non-polymer   . WATER                                ?                             'H2 O'              18.015  
MG  non-polymer   . 'MAGNESIUM ION'                      ?                             'Mg 2'              24.305  
U   'RNA linking' y "URIDINE-5'-MONOPHOSPHATE"           ?                             'C9 H13 N2 O9 P'    324.181 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  C   1  70  70  C   C   A . n 
A 1 2  C   2  71  71  C   C   A . n 
A 1 3  G   3  72  72  G   G   A . n 
A 1 4  A   4  73  73  A   A   A . n 
A 1 5  U   5  74  74  U   U   A . n 
A 1 6  G   6  75  75  G   G   A . n 
A 1 7  G   7  76  76  G   G   A . n 
A 1 8  U   8  77  77  U   U   A . n 
A 1 9  A   9  78  78  A   A   A . n 
A 1 10 G   10 79  79  G   G   A . n 
A 1 11 U   11 80  80  U   U   A . n 
A 1 12 G   12 81  81  G   G   A . n 
B 2 1  G   1  96  96  G   G   B . n 
B 2 2  C   2  97  97  C   C   B . n 
B 2 3  G   3  98  98  G   G   B . n 
B 2 4  A   4  99  99  A   A   B . n 
B 2 5  G   5  100 100 G   G   B . n 
B 2 6  A   6  101 101 A   A   B . n 
B 2 7  G   7  102 102 G   G   B . n 
B 2 8  U   8  103 103 U   U   B . n 
B 2 9  A   9  104 104 A   A   B . n 
B 2 10 DG  10 105 105 DG  DG  B . n 
B 2 11 G46 11 106 106 G46 G46 B . n 
B 2 12 C   12 107 107 C   C   B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 3 MG  1  203 203 MG  MG  A . 
D 3 MG  1  200 200 MG  MG  B . 
E 3 MG  1  201 201 MG  MG  B . 
F 3 MG  1  202 202 MG  MG  B . 
G 3 MG  1  204 204 MG  MG  B . 
H 4 HOH 1  315 315 HOH HOH A . 
H 4 HOH 2  316 316 HOH HOH A . 
H 4 HOH 3  317 317 HOH HOH A . 
H 4 HOH 4  318 318 HOH HOH A . 
H 4 HOH 5  319 319 HOH HOH A . 
H 4 HOH 6  323 323 HOH HOH A . 
H 4 HOH 7  328 328 HOH HOH A . 
H 4 HOH 8  329 329 HOH HOH A . 
H 4 HOH 9  331 331 HOH HOH A . 
H 4 HOH 10 335 335 HOH HOH A . 
H 4 HOH 11 340 340 HOH HOH A . 
H 4 HOH 12 350 350 HOH HOH A . 
H 4 HOH 13 352 352 HOH HOH A . 
H 4 HOH 14 353 353 HOH HOH A . 
H 4 HOH 15 356 356 HOH HOH A . 
H 4 HOH 16 358 358 HOH HOH A . 
H 4 HOH 17 363 363 HOH HOH A . 
H 4 HOH 18 367 367 HOH HOH A . 
H 4 HOH 19 368 368 HOH HOH A . 
H 4 HOH 20 369 369 HOH HOH A . 
H 4 HOH 21 376 376 HOH HOH A . 
H 4 HOH 22 378 378 HOH HOH A . 
H 4 HOH 23 382 382 HOH HOH A . 
H 4 HOH 24 384 384 HOH HOH A . 
H 4 HOH 25 385 385 HOH HOH A . 
H 4 HOH 26 386 386 HOH HOH A . 
H 4 HOH 27 387 387 HOH HOH A . 
H 4 HOH 28 388 388 HOH HOH A . 
H 4 HOH 29 390 390 HOH HOH A . 
H 4 HOH 30 391 391 HOH HOH A . 
H 4 HOH 31 392 392 HOH HOH A . 
H 4 HOH 32 394 394 HOH HOH A . 
H 4 HOH 33 395 395 HOH HOH A . 
H 4 HOH 34 397 397 HOH HOH A . 
H 4 HOH 35 398 398 HOH HOH A . 
H 4 HOH 36 399 399 HOH HOH A . 
H 4 HOH 37 400 400 HOH HOH A . 
H 4 HOH 38 402 402 HOH HOH A . 
H 4 HOH 39 405 405 HOH HOH A . 
H 4 HOH 40 406 406 HOH HOH A . 
H 4 HOH 41 407 407 HOH HOH A . 
H 4 HOH 42 409 409 HOH HOH A . 
H 4 HOH 43 412 412 HOH HOH A . 
H 4 HOH 44 413 413 HOH HOH A . 
H 4 HOH 45 417 417 HOH HOH A . 
H 4 HOH 46 421 421 HOH HOH A . 
H 4 HOH 47 423 423 HOH HOH A . 
I 4 HOH 1  300 300 HOH HOH B . 
I 4 HOH 2  301 301 HOH HOH B . 
I 4 HOH 3  302 302 HOH HOH B . 
I 4 HOH 4  303 303 HOH HOH B . 
I 4 HOH 5  304 304 HOH HOH B . 
I 4 HOH 6  305 305 HOH HOH B . 
I 4 HOH 7  306 306 HOH HOH B . 
I 4 HOH 8  307 307 HOH HOH B . 
I 4 HOH 9  308 308 HOH HOH B . 
I 4 HOH 10 309 309 HOH HOH B . 
I 4 HOH 11 310 310 HOH HOH B . 
I 4 HOH 12 311 311 HOH HOH B . 
I 4 HOH 13 312 312 HOH HOH B . 
I 4 HOH 14 313 313 HOH HOH B . 
I 4 HOH 15 314 314 HOH HOH B . 
I 4 HOH 16 320 320 HOH HOH B . 
I 4 HOH 17 321 321 HOH HOH B . 
I 4 HOH 18 322 322 HOH HOH B . 
I 4 HOH 19 324 324 HOH HOH B . 
I 4 HOH 20 325 325 HOH HOH B . 
I 4 HOH 21 326 326 HOH HOH B . 
I 4 HOH 22 327 327 HOH HOH B . 
I 4 HOH 23 330 330 HOH HOH B . 
I 4 HOH 24 332 332 HOH HOH B . 
I 4 HOH 25 333 333 HOH HOH B . 
I 4 HOH 26 334 334 HOH HOH B . 
I 4 HOH 27 336 336 HOH HOH B . 
I 4 HOH 28 337 337 HOH HOH B . 
I 4 HOH 29 338 338 HOH HOH B . 
I 4 HOH 30 339 339 HOH HOH B . 
I 4 HOH 31 341 341 HOH HOH B . 
I 4 HOH 32 342 342 HOH HOH B . 
I 4 HOH 33 343 343 HOH HOH B . 
I 4 HOH 34 344 344 HOH HOH B . 
I 4 HOH 35 345 345 HOH HOH B . 
I 4 HOH 36 346 346 HOH HOH B . 
I 4 HOH 37 347 347 HOH HOH B . 
I 4 HOH 38 348 348 HOH HOH B . 
I 4 HOH 39 349 349 HOH HOH B . 
I 4 HOH 40 351 351 HOH HOH B . 
I 4 HOH 41 354 354 HOH HOH B . 
I 4 HOH 42 355 355 HOH HOH B . 
I 4 HOH 43 357 357 HOH HOH B . 
I 4 HOH 44 359 359 HOH HOH B . 
I 4 HOH 45 360 360 HOH HOH B . 
I 4 HOH 46 361 361 HOH HOH B . 
I 4 HOH 47 362 362 HOH HOH B . 
I 4 HOH 48 364 364 HOH HOH B . 
I 4 HOH 49 365 365 HOH HOH B . 
I 4 HOH 50 366 366 HOH HOH B . 
I 4 HOH 51 370 370 HOH HOH B . 
I 4 HOH 52 371 371 HOH HOH B . 
I 4 HOH 53 372 372 HOH HOH B . 
I 4 HOH 54 373 373 HOH HOH B . 
I 4 HOH 55 374 374 HOH HOH B . 
I 4 HOH 56 375 375 HOH HOH B . 
I 4 HOH 57 377 377 HOH HOH B . 
I 4 HOH 58 379 379 HOH HOH B . 
I 4 HOH 59 380 380 HOH HOH B . 
I 4 HOH 60 381 381 HOH HOH B . 
I 4 HOH 61 383 383 HOH HOH B . 
I 4 HOH 62 389 389 HOH HOH B . 
I 4 HOH 63 393 393 HOH HOH B . 
I 4 HOH 64 396 396 HOH HOH B . 
I 4 HOH 65 401 401 HOH HOH B . 
I 4 HOH 66 403 403 HOH HOH B . 
I 4 HOH 67 404 404 HOH HOH B . 
I 4 HOH 68 408 408 HOH HOH B . 
I 4 HOH 69 410 410 HOH HOH B . 
I 4 HOH 70 411 411 HOH HOH B . 
I 4 HOH 71 414 414 HOH HOH B . 
I 4 HOH 72 415 415 HOH HOH B . 
I 4 HOH 73 416 416 HOH HOH B . 
I 4 HOH 74 418 418 HOH HOH B . 
I 4 HOH 75 419 419 HOH HOH B . 
I 4 HOH 76 420 420 HOH HOH B . 
I 4 HOH 77 422 422 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
X-PLOR 'model building' .   ? 1 
CNS    refinement       0.1 ? 2 
DENZO  'data reduction' .   ? 3 
X-PLOR phasing          .   ? 4 
# 
_cell.entry_id           354D 
_cell.length_a           71.184 
_cell.length_b           37.654 
_cell.length_c           32.944 
_cell.angle_alpha        90.00 
_cell.angle_beta         105.90 
_cell.angle_gamma        90.00 
_cell.Z_PDB              4 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         354D 
_symmetry.space_group_name_H-M             'C 1 2 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                5 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          354D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_percent_sol   54.82 
_exptl_crystal.density_Matthews      2.72 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION' 
_exptl_crystal_grow.temp            ? 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.00 
_exptl_crystal_grow.pdbx_details    'pH 6.00, VAPOR DIFFUSION' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100.00 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'PRINCETON 2K' 
_diffrn_detector.pdbx_collection_date   1996-09-09 
_diffrn_detector.details                'SILICON 111 BENDING MIRROR' 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'CHESS BEAMLINE A1' 
_diffrn_source.pdbx_synchrotron_site       CHESS 
_diffrn_source.pdbx_synchrotron_beamline   A1 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     354D 
_reflns.observed_criterion_sigma_I   -3.000 
_reflns.observed_criterion_sigma_F   -3.000 
_reflns.d_resolution_low             20.000 
_reflns.d_resolution_high            1.500 
_reflns.number_obs                   12306 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         90.700 
_reflns.pdbx_Rmerge_I_obs            0.0550000 
_reflns.pdbx_Rsym_value              0.0550000 
_reflns.pdbx_netI_over_sigmaI        7.100 
_reflns.B_iso_Wilson_estimate        19.40 
_reflns.pdbx_redundancy              4.600 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             1.500 
_reflns_shell.d_res_low              1.530 
_reflns_shell.percent_possible_all   54.00 
_reflns_shell.Rmerge_I_obs           0.4800000 
_reflns_shell.pdbx_Rsym_value        0.4800000 
_reflns_shell.meanI_over_sigI_obs    2.000 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 354D 
_refine.ls_number_reflns_obs                     12296 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          0.000 
_refine.pdbx_data_cutoff_high_absF               4170208.000 
_refine.pdbx_data_cutoff_low_absF                0.0000 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             20.000 
_refine.ls_d_res_high                            1.500 
_refine.ls_percent_reflns_obs                    90.500 
_refine.ls_R_factor_obs                          0.2020000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.2020000 
_refine.ls_R_factor_R_free                       0.2280000 
_refine.ls_R_factor_R_free_error                 0.007 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 9.50 
_refine.ls_number_reflns_R_free                  1170 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               24.20 
_refine.aniso_B[1][1]                            -5.400 
_refine.aniso_B[2][2]                            2.7000 
_refine.aniso_B[3][3]                            2.8000 
_refine.aniso_B[1][2]                            0.0000 
_refine.aniso_B[1][3]                            0.7000 
_refine.aniso_B[2][3]                            0.0000 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  
;THERE IS A DIASTEREOMERIC MIXTURE OF RP AND SP
PHOSPHOROTHIOATE AT G106, BOTH FORMS ARE 0.5 OCCUPANCY AS
ALTERNATE CONFORMATIONS.
WATER MEDIATED BASE-PAIRS:
N3 U 74 - HOH 329 - N2 G 102
N1 G 75 - HOH 324 - N1 A 101
O6 G 76 - HOH 330 - N7 G 100
;
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        354D 
_refine_analyze.Luzzati_coordinate_error_obs    0.18 
_refine_analyze.Luzzati_sigma_a_obs             0.15 
_refine_analyze.Luzzati_d_res_low_obs           5.00 
_refine_analyze.Luzzati_coordinate_error_free   0.20 
_refine_analyze.Luzzati_sigma_a_free            0.1 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      ? 
_refine_analyze.occupancy_sum_hydrogen          ? 
_refine_analyze.occupancy_sum_non_hydrogen      ? 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   516 
_refine_hist.pdbx_number_atoms_ligand         5 
_refine_hist.number_atoms_solvent             124 
_refine_hist.number_atoms_total               645 
_refine_hist.d_res_high                       1.500 
_refine_hist.d_res_low                        20.000 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
c_bond_d                0.010 ?     ? ? 'X-RAY DIFFRACTION' ? 
c_bond_d_na             ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_bond_d_prot           ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d               ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d_na            ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d_prot          ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg             1.20  ?     ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg_na          ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg_prot        ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d      30.0  ?     ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d_na   ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d_prot ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d      1.42  ?     ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d_na   ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d_prot ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
c_mcbond_it             1.790 1.500 ? ? 'X-RAY DIFFRACTION' ? 
c_mcangle_it            2.540 2.000 ? ? 'X-RAY DIFFRACTION' ? 
c_scbond_it             1.630 2.000 ? ? 'X-RAY DIFFRACTION' ? 
c_scangle_it            1.900 2.500 ? ? 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   7 
_refine_ls_shell.d_res_high                       1.50 
_refine_ls_shell.d_res_low                        1.58 
_refine_ls_shell.number_reflns_R_work             1007 
_refine_ls_shell.R_factor_R_work                  0.2870000 
_refine_ls_shell.percent_reflns_obs               58.00 
_refine_ls_shell.R_factor_R_free                  0.2680000 
_refine_ls_shell.R_factor_R_free_error            0.03 
_refine_ls_shell.percent_reflns_R_free            5.00 
_refine_ls_shell.number_reflns_R_free             96 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
# 
loop_
_pdbx_xplor_file.serial_no 
_pdbx_xplor_file.param_file 
_pdbx_xplor_file.topol_file 
_pdbx_xplor_file.pdbx_refine_id 
1 DNA-RNA-MULTI-ENDO.PARAM DNA-RNA-MULTI-ENDO.TOP 'X-RAY DIFFRACTION' 
2 MG.PARAM                 MG.PARAM               'X-RAY DIFFRACTION' 
3 PATCH.PAR                PATCH.PAR              'X-RAY DIFFRACTION' 
# 
_database_PDB_matrix.entry_id          354D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  354D 
_struct.title                     'Structure of loop E FROM E. coli 5S RRNA' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        354D 
_struct_keywords.pdbx_keywords   RNA 
_struct_keywords.text            'U-RNA, DOUBLE HELIX, INTERNAL LOOP, OVERHANGING BASE, MISMATCHED, RNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 3 ? 
E N N 3 ? 
F N N 3 ? 
G N N 3 ? 
H N N 4 ? 
I N N 4 ? 
# 
loop_
_struct_ref.id 
_struct_ref.entity_id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_db_isoform 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
1 1 PDB 354D 354D ? ? ? 
2 2 PDB 354D 354D ? ? ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 354D A 1 ? 12 ? 354D 70 ? 81  ? 70 81  
2 2 354D B 1 ? 12 ? 354D 96 ? 107 ? 96 107 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 2080  ? 
1 MORE         -46.9 ? 
1 'SSA (A^2)'  4500  ? 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H,I 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? B DG  10 "O3'" ? ? ? 1_555 B G46 11 P  ? ? B DG  105 B G46 106 1_555 ? ? ? ? ? ? ?                    1.632 
? ? 
covale2  covale one  ? B G46 11 "O3'" ? ? ? 1_555 B C   12 P  ? ? B G46 106 B C   107 1_555 ? ? ? ? ? ? ?                    1.630 
? ? 
metalc1  metalc ?    ? C MG  .  MG    ? ? ? 1_555 H HOH .  O  ? ? A MG  203 A HOH 315 1_555 ? ? ? ? ? ? ?                    2.208 
? ? 
metalc2  metalc ?    ? C MG  .  MG    ? ? ? 1_555 H HOH .  O  ? ? A MG  203 A HOH 316 1_555 ? ? ? ? ? ? ?                    2.081 
? ? 
metalc3  metalc ?    ? C MG  .  MG    ? ? ? 1_555 H HOH .  O  ? ? A MG  203 A HOH 317 1_555 ? ? ? ? ? ? ?                    2.318 
? ? 
metalc4  metalc ?    ? C MG  .  MG    ? ? ? 1_555 H HOH .  O  ? ? A MG  203 A HOH 318 1_555 ? ? ? ? ? ? ?                    2.393 
? ? 
metalc5  metalc ?    ? C MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? A MG  203 B HOH 313 1_555 ? ? ? ? ? ? ?                    2.164 
? ? 
metalc6  metalc ?    ? C MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? A MG  203 B HOH 314 1_555 ? ? ? ? ? ? ?                    1.944 
? ? 
metalc7  metalc ?    ? H HOH .  O     ? ? ? 1_555 G MG  .  MG ? ? A HOH 319 B MG  204 1_555 ? ? ? ? ? ? ?                    2.012 
? ? 
metalc8  metalc ?    ? H HOH .  O     ? ? ? 1_555 G MG  .  MG ? ? A HOH 323 B MG  204 1_555 ? ? ? ? ? ? ?                    2.271 
? ? 
metalc9  metalc ?    ? B G   3  O6    ? ? ? 1_555 G MG  .  MG ? ? B G   98  B MG  204 1_555 ? ? ? ? ? ? ?                    2.595 
? ? 
metalc10 metalc ?    ? B G   5  OP2   ? ? ? 1_555 F MG  .  MG ? ? B G   100 B MG  202 1_555 ? ? ? ? ? ? ?                    2.141 
? ? 
metalc11 metalc ?    ? B A   6  OP2   ? ? ? 1_555 E MG  .  MG ? ? B A   101 B MG  201 1_555 ? ? ? ? ? ? ?                    2.051 
? ? 
metalc12 metalc ?    ? D MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  200 B HOH 300 1_555 ? ? ? ? ? ? ?                    2.291 
? ? 
metalc13 metalc ?    ? D MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  200 B HOH 301 1_555 ? ? ? ? ? ? ?                    1.899 
? ? 
metalc14 metalc ?    ? D MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  200 B HOH 302 1_555 ? ? ? ? ? ? ?                    2.190 
? ? 
metalc15 metalc ?    ? D MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  200 B HOH 303 1_555 ? ? ? ? ? ? ?                    1.973 
? ? 
metalc16 metalc ?    ? D MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  200 B HOH 304 1_555 ? ? ? ? ? ? ?                    2.264 
? ? 
metalc17 metalc ?    ? D MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  200 B HOH 305 1_555 ? ? ? ? ? ? ?                    2.117 
? ? 
metalc18 metalc ?    ? E MG  .  MG    ? ? ? 1_555 F MG  .  MG ? ? B MG  201 B MG  202 1_555 ? ? ? ? ? ? ?                    2.697 
? ? 
metalc19 metalc ?    ? E MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  201 B HOH 306 1_555 ? ? ? ? ? ? ?                    2.144 
? ? 
metalc20 metalc ?    ? E MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  201 B HOH 307 1_555 ? ? ? ? ? ? ?                    2.269 
? ? 
metalc21 metalc ?    ? E MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  201 B HOH 308 1_555 ? ? ? ? ? ? ?                    2.474 
? ? 
metalc22 metalc ?    ? E MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  201 B HOH 309 1_555 ? ? ? ? ? ? ?                    2.208 
? ? 
metalc23 metalc ?    ? E MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  201 B HOH 310 1_555 ? ? ? ? ? ? ?                    1.814 
? ? 
metalc24 metalc ?    ? F MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  202 B HOH 308 1_555 ? ? ? ? ? ? ?                    2.407 
? ? 
metalc25 metalc ?    ? F MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  202 B HOH 309 1_555 ? ? ? ? ? ? ?                    2.202 
? ? 
metalc26 metalc ?    ? F MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  202 B HOH 310 1_555 ? ? ? ? ? ? ?                    1.881 
? ? 
metalc27 metalc ?    ? F MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  202 B HOH 311 1_555 ? ? ? ? ? ? ?                    2.108 
? ? 
metalc28 metalc ?    ? F MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  202 B HOH 312 1_555 ? ? ? ? ? ? ?                    2.682 
? ? 
metalc29 metalc ?    ? G MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  204 B HOH 320 1_555 ? ? ? ? ? ? ?                    2.265 
? ? 
metalc30 metalc ?    ? G MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  204 B HOH 321 1_555 ? ? ? ? ? ? ?                    2.224 
? ? 
metalc31 metalc ?    ? G MG  .  MG    ? ? ? 1_555 I HOH .  O  ? ? B MG  204 B HOH 322 1_555 ? ? ? ? ? ? ?                    2.346 
? ? 
hydrog1  hydrog ?    ? A C   1  N3    ? ? ? 1_555 B G46 11 N1 ? ? A C   70  B G46 106 1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog2  hydrog ?    ? A C   1  N4    ? ? ? 1_555 B G46 11 O6 ? ? A C   70  B G46 106 1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog3  hydrog ?    ? A C   1  O2    ? ? ? 1_555 B G46 11 N2 ? ? A C   70  B G46 106 1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog4  hydrog ?    ? A C   2  N3    ? ? ? 1_555 B DG  10 N1 ? ? A C   71  B DG  105 1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog5  hydrog ?    ? A C   2  N4    ? ? ? 1_555 B DG  10 O6 ? ? A C   71  B DG  105 1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog6  hydrog ?    ? A C   2  O2    ? ? ? 1_555 B DG  10 N2 ? ? A C   71  B DG  105 1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog7  hydrog ?    ? A G   3  N2    ? ? ? 1_555 B A   9  N7 ? ? A G   72  B A   104 1_555 ? ? ? ? ? ? TYPE_11_PAIR         ?     
? ? 
hydrog8  hydrog ?    ? A G   3  N3    ? ? ? 1_555 B A   9  N6 ? ? A G   72  B A   104 1_555 ? ? ? ? ? ? TYPE_11_PAIR         ?     
? ? 
hydrog9  hydrog ?    ? A A   4  N6    ? ? ? 1_555 B U   8  O2 ? ? A A   73  B U   103 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     
? ? 
hydrog10 hydrog ?    ? A A   4  N7    ? ? ? 1_555 B U   8  N3 ? ? A A   73  B U   103 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     
? ? 
hydrog11 hydrog ?    ? A U   5  O4    ? ? ? 1_555 B G   7  N1 ? ? A U   74  B G   102 1_555 ? ? ? ? ? ? 'U-G MISPAIR'        ?     
? ? 
hydrog12 hydrog ?    ? A G   6  O6    ? ? ? 1_555 B A   6  N6 ? ? A G   75  B A   101 1_555 ? ? ? ? ? ? 'G-A MISPAIR'        ?     
? ? 
hydrog13 hydrog ?    ? A G   7  N1    ? ? ? 1_555 B G   5  O6 ? ? A G   76  B G   100 1_555 ? ? ? ? ? ? 'G-G MISPAIR'        ?     
? ? 
hydrog14 hydrog ?    ? A U   8  N3    ? ? ? 1_555 B A   4  N7 ? ? A U   77  B A   99  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     
? ? 
hydrog15 hydrog ?    ? A U   8  O2    ? ? ? 1_555 B A   4  N6 ? ? A U   77  B A   99  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     
? ? 
hydrog16 hydrog ?    ? A A   9  N6    ? ? ? 1_555 B G   3  N3 ? ? A A   78  B G   98  1_555 ? ? ? ? ? ? TYPE_11_PAIR         ?     
? ? 
hydrog17 hydrog ?    ? A A   9  N7    ? ? ? 1_555 B G   3  N2 ? ? A A   78  B G   98  1_555 ? ? ? ? ? ? TYPE_11_PAIR         ?     
? ? 
hydrog18 hydrog ?    ? A G   10 N1    ? ? ? 1_555 B C   2  N3 ? ? A G   79  B C   97  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog19 hydrog ?    ? A G   10 N2    ? ? ? 1_555 B C   2  O2 ? ? A G   79  B C   97  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog20 hydrog ?    ? A G   10 O6    ? ? ? 1_555 B C   2  N4 ? ? A G   79  B C   97  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog21 hydrog ?    ? A U   11 N3    ? ? ? 1_555 B G   1  O6 ? ? A U   80  B G   96  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog22 hydrog ?    ? A U   11 O2    ? ? ? 1_555 B G   1  N1 ? ? A U   80  B G   96  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O   ? H HOH . ? A HOH 315 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? H HOH . ? A HOH 316 ? 1_555 94.4  ? 
2  O   ? H HOH . ? A HOH 315 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? H HOH . ? A HOH 317 ? 1_555 110.2 ? 
3  O   ? H HOH . ? A HOH 316 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? H HOH . ? A HOH 317 ? 1_555 144.9 ? 
4  O   ? H HOH . ? A HOH 315 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? H HOH . ? A HOH 318 ? 1_555 119.5 ? 
5  O   ? H HOH . ? A HOH 316 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? H HOH . ? A HOH 318 ? 1_555 82.0  ? 
6  O   ? H HOH . ? A HOH 317 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? H HOH . ? A HOH 318 ? 1_555 64.3  ? 
7  O   ? H HOH . ? A HOH 315 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 313 ? 1_555 154.9 ? 
8  O   ? H HOH . ? A HOH 316 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 313 ? 1_555 85.9  ? 
9  O   ? H HOH . ? A HOH 317 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 313 ? 1_555 82.1  ? 
10 O   ? H HOH . ? A HOH 318 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 313 ? 1_555 85.5  ? 
11 O   ? H HOH . ? A HOH 315 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 314 ? 1_555 88.1  ? 
12 O   ? H HOH . ? A HOH 316 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 314 ? 1_555 124.4 ? 
13 O   ? H HOH . ? A HOH 317 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 314 ? 1_555 82.4  ? 
14 O   ? H HOH . ? A HOH 318 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 314 ? 1_555 141.9 ? 
15 O   ? I HOH . ? B HOH 313 ? 1_555 MG ? C MG . ? A MG 203 ? 1_555 O  ? I HOH . ? B HOH 314 ? 1_555 71.4  ? 
16 O   ? H HOH . ? A HOH 319 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? H HOH . ? A HOH 323 ? 1_555 93.2  ? 
17 O   ? H HOH . ? A HOH 319 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O6 ? B G   3 ? B G   98  ? 1_555 178.8 ? 
18 O   ? H HOH . ? A HOH 323 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O6 ? B G   3 ? B G   98  ? 1_555 85.7  ? 
19 O   ? H HOH . ? A HOH 319 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 320 ? 1_555 94.4  ? 
20 O   ? H HOH . ? A HOH 323 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 320 ? 1_555 97.5  ? 
21 O6  ? B G   3 ? B G   98  ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 320 ? 1_555 86.0  ? 
22 O   ? H HOH . ? A HOH 319 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 321 ? 1_555 98.2  ? 
23 O   ? H HOH . ? A HOH 323 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 321 ? 1_555 84.8  ? 
24 O6  ? B G   3 ? B G   98  ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 321 ? 1_555 81.4  ? 
25 O   ? I HOH . ? B HOH 320 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 321 ? 1_555 167.0 ? 
26 O   ? H HOH . ? A HOH 319 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 322 ? 1_555 87.2  ? 
27 O   ? H HOH . ? A HOH 323 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 322 ? 1_555 165.2 ? 
28 O6  ? B G   3 ? B G   98  ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 322 ? 1_555 93.8  ? 
29 O   ? I HOH . ? B HOH 320 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 322 ? 1_555 97.3  ? 
30 O   ? I HOH . ? B HOH 321 ? 1_555 MG ? G MG . ? B MG 204 ? 1_555 O  ? I HOH . ? B HOH 322 ? 1_555 80.5  ? 
31 OP2 ? B G   5 ? B G   100 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 308 ? 1_555 160.4 ? 
32 OP2 ? B G   5 ? B G   100 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 88.4  ? 
33 O   ? I HOH . ? B HOH 308 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 77.3  ? 
34 OP2 ? B G   5 ? B G   100 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 86.1  ? 
35 O   ? I HOH . ? B HOH 308 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 80.6  ? 
36 O   ? I HOH . ? B HOH 309 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 89.5  ? 
37 OP2 ? B G   5 ? B G   100 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 311 ? 1_555 79.3  ? 
38 O   ? I HOH . ? B HOH 308 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 311 ? 1_555 117.5 ? 
39 O   ? I HOH . ? B HOH 309 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 311 ? 1_555 107.2 ? 
40 O   ? I HOH . ? B HOH 310 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 311 ? 1_555 157.3 ? 
41 OP2 ? B G   5 ? B G   100 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 312 ? 1_555 93.3  ? 
42 O   ? I HOH . ? B HOH 308 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 312 ? 1_555 100.0 ? 
43 O   ? I HOH . ? B HOH 309 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 312 ? 1_555 175.3 ? 
44 O   ? I HOH . ? B HOH 310 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 312 ? 1_555 86.3  ? 
45 O   ? I HOH . ? B HOH 311 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O  ? I HOH . ? B HOH 312 ? 1_555 77.4  ? 
46 OP2 ? B A   6 ? B A   101 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 MG ? F MG  . ? B MG  202 ? 1_555 125.1 ? 
47 OP2 ? B A   6 ? B A   101 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 306 ? 1_555 101.5 ? 
48 MG  ? F MG  . ? B MG  202 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 306 ? 1_555 128.2 ? 
49 OP2 ? B A   6 ? B A   101 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 307 ? 1_555 89.7  ? 
50 MG  ? F MG  . ? B MG  202 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 307 ? 1_555 123.8 ? 
51 O   ? I HOH . ? B HOH 306 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 307 ? 1_555 71.7  ? 
52 OP2 ? B A   6 ? B A   101 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 308 ? 1_555 179.1 ? 
53 MG  ? F MG  . ? B MG  202 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 308 ? 1_555 55.3  ? 
54 O   ? I HOH . ? B HOH 306 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 308 ? 1_555 78.5  ? 
55 O   ? I HOH . ? B HOH 307 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 308 ? 1_555 89.4  ? 
56 OP2 ? B A   6 ? B A   101 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 103.7 ? 
57 MG  ? F MG  . ? B MG  202 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 52.2  ? 
58 O   ? I HOH . ? B HOH 306 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 141.5 ? 
59 O   ? I HOH . ? B HOH 307 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 79.8  ? 
60 O   ? I HOH . ? B HOH 308 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 309 ? 1_555 75.8  ? 
61 OP2 ? B A   6 ? B A   101 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 100.8 ? 
62 MG  ? F MG  . ? B MG  202 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 44.1  ? 
63 O   ? I HOH . ? B HOH 306 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 112.2 ? 
64 O   ? I HOH . ? B HOH 307 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 167.4 ? 
65 O   ? I HOH . ? B HOH 308 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 80.0  ? 
66 O   ? I HOH . ? B HOH 309 ? 1_555 MG ? E MG . ? B MG 201 ? 1_555 O  ? I HOH . ? B HOH 310 ? 1_555 91.0  ? 
67 O   ? I HOH . ? B HOH 300 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 301 ? 1_555 169.9 ? 
68 O   ? I HOH . ? B HOH 300 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 302 ? 1_555 82.0  ? 
69 O   ? I HOH . ? B HOH 301 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 302 ? 1_555 93.4  ? 
70 O   ? I HOH . ? B HOH 300 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 303 ? 1_555 92.2  ? 
71 O   ? I HOH . ? B HOH 301 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 303 ? 1_555 90.4  ? 
72 O   ? I HOH . ? B HOH 302 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 303 ? 1_555 167.5 ? 
73 O   ? I HOH . ? B HOH 300 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 304 ? 1_555 96.7  ? 
74 O   ? I HOH . ? B HOH 301 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 304 ? 1_555 93.3  ? 
75 O   ? I HOH . ? B HOH 302 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 304 ? 1_555 105.4 ? 
76 O   ? I HOH . ? B HOH 303 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 304 ? 1_555 86.2  ? 
77 O   ? I HOH . ? B HOH 300 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 305 ? 1_555 80.7  ? 
78 O   ? I HOH . ? B HOH 301 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 305 ? 1_555 89.5  ? 
79 O   ? I HOH . ? B HOH 302 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 305 ? 1_555 76.3  ? 
80 O   ? I HOH . ? B HOH 303 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 305 ? 1_555 91.9  ? 
81 O   ? I HOH . ? B HOH 304 ? 1_555 MG ? D MG . ? B MG 200 ? 1_555 O  ? I HOH . ? B HOH 305 ? 1_555 176.7 ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A MG 203 ? 7 'BINDING SITE FOR RESIDUE MG A 203' 
AC2 Software B MG 200 ? 6 'BINDING SITE FOR RESIDUE MG B 200' 
AC3 Software B MG 201 ? 7 'BINDING SITE FOR RESIDUE MG B 201' 
AC4 Software B MG 202 ? 7 'BINDING SITE FOR RESIDUE MG B 202' 
AC5 Software B MG 204 ? 6 'BINDING SITE FOR RESIDUE MG B 204' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 7 G   A 7 ? G   A 76  . ? 1_555 ? 
2  AC1 7 HOH H . ? HOH A 315 . ? 1_555 ? 
3  AC1 7 HOH H . ? HOH A 316 . ? 1_555 ? 
4  AC1 7 HOH H . ? HOH A 317 . ? 1_555 ? 
5  AC1 7 HOH H . ? HOH A 318 . ? 1_555 ? 
6  AC1 7 HOH I . ? HOH B 313 . ? 1_555 ? 
7  AC1 7 HOH I . ? HOH B 314 . ? 1_555 ? 
8  AC2 6 HOH I . ? HOH B 300 . ? 1_555 ? 
9  AC2 6 HOH I . ? HOH B 301 . ? 1_555 ? 
10 AC2 6 HOH I . ? HOH B 302 . ? 1_555 ? 
11 AC2 6 HOH I . ? HOH B 303 . ? 1_555 ? 
12 AC2 6 HOH I . ? HOH B 304 . ? 1_555 ? 
13 AC2 6 HOH I . ? HOH B 305 . ? 1_555 ? 
14 AC3 7 A   B 6 ? A   B 101 . ? 1_555 ? 
15 AC3 7 MG  F . ? MG  B 202 . ? 1_555 ? 
16 AC3 7 HOH I . ? HOH B 306 . ? 1_555 ? 
17 AC3 7 HOH I . ? HOH B 307 . ? 1_555 ? 
18 AC3 7 HOH I . ? HOH B 308 . ? 1_555 ? 
19 AC3 7 HOH I . ? HOH B 309 . ? 1_555 ? 
20 AC3 7 HOH I . ? HOH B 310 . ? 1_555 ? 
21 AC4 7 G   B 5 ? G   B 100 . ? 1_555 ? 
22 AC4 7 MG  E . ? MG  B 201 . ? 1_555 ? 
23 AC4 7 HOH I . ? HOH B 308 . ? 1_555 ? 
24 AC4 7 HOH I . ? HOH B 309 . ? 1_555 ? 
25 AC4 7 HOH I . ? HOH B 310 . ? 1_555 ? 
26 AC4 7 HOH I . ? HOH B 311 . ? 1_555 ? 
27 AC4 7 HOH I . ? HOH B 312 . ? 1_555 ? 
28 AC5 6 HOH H . ? HOH A 319 . ? 1_555 ? 
29 AC5 6 HOH H . ? HOH A 323 . ? 1_555 ? 
30 AC5 6 G   B 3 ? G   B 98  . ? 1_555 ? 
31 AC5 6 HOH I . ? HOH B 320 . ? 1_555 ? 
32 AC5 6 HOH I . ? HOH B 321 . ? 1_555 ? 
33 AC5 6 HOH I . ? HOH B 322 . ? 1_555 ? 
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1 1 O B HOH 375 ? ? O B HOH 411 ? ? 2.09 
2 1 O A HOH 353 ? ? O A HOH 402 ? ? 2.12 
3 1 O A HOH 387 ? ? O A HOH 417 ? ? 2.15 
4 1 O B HOH 372 ? ? O B HOH 389 ? ? 2.17 
# 
_pdbx_struct_mod_residue.id               1 
_pdbx_struct_mod_residue.label_asym_id    B 
_pdbx_struct_mod_residue.label_comp_id    G46 
_pdbx_struct_mod_residue.label_seq_id     11 
_pdbx_struct_mod_residue.auth_asym_id     B 
_pdbx_struct_mod_residue.auth_comp_id     G46 
_pdbx_struct_mod_residue.auth_seq_id      106 
_pdbx_struct_mod_residue.PDB_ins_code     ? 
_pdbx_struct_mod_residue.parent_comp_id   G 
_pdbx_struct_mod_residue.details          "GUANOSINE-5'-MONOTHIOPHOSPHATE" 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A   OP3    O  N N 1   
A   P      P  N N 2   
A   OP1    O  N N 3   
A   OP2    O  N N 4   
A   "O5'"  O  N N 5   
A   "C5'"  C  N N 6   
A   "C4'"  C  N R 7   
A   "O4'"  O  N N 8   
A   "C3'"  C  N S 9   
A   "O3'"  O  N N 10  
A   "C2'"  C  N R 11  
A   "O2'"  O  N N 12  
A   "C1'"  C  N R 13  
A   N9     N  Y N 14  
A   C8     C  Y N 15  
A   N7     N  Y N 16  
A   C5     C  Y N 17  
A   C6     C  Y N 18  
A   N6     N  N N 19  
A   N1     N  Y N 20  
A   C2     C  Y N 21  
A   N3     N  Y N 22  
A   C4     C  Y N 23  
A   HOP3   H  N N 24  
A   HOP2   H  N N 25  
A   "H5'"  H  N N 26  
A   "H5''" H  N N 27  
A   "H4'"  H  N N 28  
A   "H3'"  H  N N 29  
A   "HO3'" H  N N 30  
A   "H2'"  H  N N 31  
A   "HO2'" H  N N 32  
A   "H1'"  H  N N 33  
A   H8     H  N N 34  
A   H61    H  N N 35  
A   H62    H  N N 36  
A   H2     H  N N 37  
C   OP3    O  N N 38  
C   P      P  N N 39  
C   OP1    O  N N 40  
C   OP2    O  N N 41  
C   "O5'"  O  N N 42  
C   "C5'"  C  N N 43  
C   "C4'"  C  N R 44  
C   "O4'"  O  N N 45  
C   "C3'"  C  N S 46  
C   "O3'"  O  N N 47  
C   "C2'"  C  N R 48  
C   "O2'"  O  N N 49  
C   "C1'"  C  N R 50  
C   N1     N  N N 51  
C   C2     C  N N 52  
C   O2     O  N N 53  
C   N3     N  N N 54  
C   C4     C  N N 55  
C   N4     N  N N 56  
C   C5     C  N N 57  
C   C6     C  N N 58  
C   HOP3   H  N N 59  
C   HOP2   H  N N 60  
C   "H5'"  H  N N 61  
C   "H5''" H  N N 62  
C   "H4'"  H  N N 63  
C   "H3'"  H  N N 64  
C   "HO3'" H  N N 65  
C   "H2'"  H  N N 66  
C   "HO2'" H  N N 67  
C   "H1'"  H  N N 68  
C   H41    H  N N 69  
C   H42    H  N N 70  
C   H5     H  N N 71  
C   H6     H  N N 72  
DG  OP3    O  N N 73  
DG  P      P  N N 74  
DG  OP1    O  N N 75  
DG  OP2    O  N N 76  
DG  "O5'"  O  N N 77  
DG  "C5'"  C  N N 78  
DG  "C4'"  C  N R 79  
DG  "O4'"  O  N N 80  
DG  "C3'"  C  N S 81  
DG  "O3'"  O  N N 82  
DG  "C2'"  C  N N 83  
DG  "C1'"  C  N R 84  
DG  N9     N  Y N 85  
DG  C8     C  Y N 86  
DG  N7     N  Y N 87  
DG  C5     C  Y N 88  
DG  C6     C  N N 89  
DG  O6     O  N N 90  
DG  N1     N  N N 91  
DG  C2     C  N N 92  
DG  N2     N  N N 93  
DG  N3     N  N N 94  
DG  C4     C  Y N 95  
DG  HOP3   H  N N 96  
DG  HOP2   H  N N 97  
DG  "H5'"  H  N N 98  
DG  "H5''" H  N N 99  
DG  "H4'"  H  N N 100 
DG  "H3'"  H  N N 101 
DG  "HO3'" H  N N 102 
DG  "H2'"  H  N N 103 
DG  "H2''" H  N N 104 
DG  "H1'"  H  N N 105 
DG  H8     H  N N 106 
DG  H1     H  N N 107 
DG  H21    H  N N 108 
DG  H22    H  N N 109 
G   OP3    O  N N 110 
G   P      P  N N 111 
G   OP1    O  N N 112 
G   OP2    O  N N 113 
G   "O5'"  O  N N 114 
G   "C5'"  C  N N 115 
G   "C4'"  C  N R 116 
G   "O4'"  O  N N 117 
G   "C3'"  C  N S 118 
G   "O3'"  O  N N 119 
G   "C2'"  C  N R 120 
G   "O2'"  O  N N 121 
G   "C1'"  C  N R 122 
G   N9     N  Y N 123 
G   C8     C  Y N 124 
G   N7     N  Y N 125 
G   C5     C  Y N 126 
G   C6     C  N N 127 
G   O6     O  N N 128 
G   N1     N  N N 129 
G   C2     C  N N 130 
G   N2     N  N N 131 
G   N3     N  N N 132 
G   C4     C  Y N 133 
G   HOP3   H  N N 134 
G   HOP2   H  N N 135 
G   "H5'"  H  N N 136 
G   "H5''" H  N N 137 
G   "H4'"  H  N N 138 
G   "H3'"  H  N N 139 
G   "HO3'" H  N N 140 
G   "H2'"  H  N N 141 
G   "HO2'" H  N N 142 
G   "H1'"  H  N N 143 
G   H8     H  N N 144 
G   H1     H  N N 145 
G   H21    H  N N 146 
G   H22    H  N N 147 
G46 P      P  N N 148 
G46 O1P    O  N N 149 
G46 S2P    S  N N 150 
G46 O3P    O  N N 151 
G46 "O5'"  O  N N 152 
G46 "C5'"  C  N N 153 
G46 "C4'"  C  N R 154 
G46 "O4'"  O  N N 155 
G46 "C3'"  C  N S 156 
G46 "O3'"  O  N N 157 
G46 "C2'"  C  N R 158 
G46 "C1'"  C  N R 159 
G46 "O2'"  O  N N 160 
G46 N9     N  Y N 161 
G46 C8     C  Y N 162 
G46 N7     N  Y N 163 
G46 C5     C  Y N 164 
G46 C6     C  N N 165 
G46 O6     O  N N 166 
G46 N1     N  N N 167 
G46 C2     C  N N 168 
G46 N2     N  N N 169 
G46 N3     N  N N 170 
G46 C4     C  Y N 171 
G46 H1P    H  N N 172 
G46 HS     H  N N 173 
G46 "H5'1" H  N N 174 
G46 "H5'2" H  N N 175 
G46 "H4'"  H  N N 176 
G46 "H3'"  H  N N 177 
G46 HA     H  N N 178 
G46 "H2'"  H  N N 179 
G46 "H1'"  H  N N 180 
G46 HB     H  N N 181 
G46 H8     H  N N 182 
G46 H1     H  N N 183 
G46 H2N1   H  N N 184 
G46 H2N2   H  N N 185 
HOH O      O  N N 186 
HOH H1     H  N N 187 
HOH H2     H  N N 188 
MG  MG     MG N N 189 
U   OP3    O  N N 190 
U   P      P  N N 191 
U   OP1    O  N N 192 
U   OP2    O  N N 193 
U   "O5'"  O  N N 194 
U   "C5'"  C  N N 195 
U   "C4'"  C  N R 196 
U   "O4'"  O  N N 197 
U   "C3'"  C  N S 198 
U   "O3'"  O  N N 199 
U   "C2'"  C  N R 200 
U   "O2'"  O  N N 201 
U   "C1'"  C  N R 202 
U   N1     N  N N 203 
U   C2     C  N N 204 
U   O2     O  N N 205 
U   N3     N  N N 206 
U   C4     C  N N 207 
U   O4     O  N N 208 
U   C5     C  N N 209 
U   C6     C  N N 210 
U   HOP3   H  N N 211 
U   HOP2   H  N N 212 
U   "H5'"  H  N N 213 
U   "H5''" H  N N 214 
U   "H4'"  H  N N 215 
U   "H3'"  H  N N 216 
U   "HO3'" H  N N 217 
U   "H2'"  H  N N 218 
U   "HO2'" H  N N 219 
U   "H1'"  H  N N 220 
U   H3     H  N N 221 
U   H5     H  N N 222 
U   H6     H  N N 223 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A   OP3   P      sing N N 1   
A   OP3   HOP3   sing N N 2   
A   P     OP1    doub N N 3   
A   P     OP2    sing N N 4   
A   P     "O5'"  sing N N 5   
A   OP2   HOP2   sing N N 6   
A   "O5'" "C5'"  sing N N 7   
A   "C5'" "C4'"  sing N N 8   
A   "C5'" "H5'"  sing N N 9   
A   "C5'" "H5''" sing N N 10  
A   "C4'" "O4'"  sing N N 11  
A   "C4'" "C3'"  sing N N 12  
A   "C4'" "H4'"  sing N N 13  
A   "O4'" "C1'"  sing N N 14  
A   "C3'" "O3'"  sing N N 15  
A   "C3'" "C2'"  sing N N 16  
A   "C3'" "H3'"  sing N N 17  
A   "O3'" "HO3'" sing N N 18  
A   "C2'" "O2'"  sing N N 19  
A   "C2'" "C1'"  sing N N 20  
A   "C2'" "H2'"  sing N N 21  
A   "O2'" "HO2'" sing N N 22  
A   "C1'" N9     sing N N 23  
A   "C1'" "H1'"  sing N N 24  
A   N9    C8     sing Y N 25  
A   N9    C4     sing Y N 26  
A   C8    N7     doub Y N 27  
A   C8    H8     sing N N 28  
A   N7    C5     sing Y N 29  
A   C5    C6     sing Y N 30  
A   C5    C4     doub Y N 31  
A   C6    N6     sing N N 32  
A   C6    N1     doub Y N 33  
A   N6    H61    sing N N 34  
A   N6    H62    sing N N 35  
A   N1    C2     sing Y N 36  
A   C2    N3     doub Y N 37  
A   C2    H2     sing N N 38  
A   N3    C4     sing Y N 39  
C   OP3   P      sing N N 40  
C   OP3   HOP3   sing N N 41  
C   P     OP1    doub N N 42  
C   P     OP2    sing N N 43  
C   P     "O5'"  sing N N 44  
C   OP2   HOP2   sing N N 45  
C   "O5'" "C5'"  sing N N 46  
C   "C5'" "C4'"  sing N N 47  
C   "C5'" "H5'"  sing N N 48  
C   "C5'" "H5''" sing N N 49  
C   "C4'" "O4'"  sing N N 50  
C   "C4'" "C3'"  sing N N 51  
C   "C4'" "H4'"  sing N N 52  
C   "O4'" "C1'"  sing N N 53  
C   "C3'" "O3'"  sing N N 54  
C   "C3'" "C2'"  sing N N 55  
C   "C3'" "H3'"  sing N N 56  
C   "O3'" "HO3'" sing N N 57  
C   "C2'" "O2'"  sing N N 58  
C   "C2'" "C1'"  sing N N 59  
C   "C2'" "H2'"  sing N N 60  
C   "O2'" "HO2'" sing N N 61  
C   "C1'" N1     sing N N 62  
C   "C1'" "H1'"  sing N N 63  
C   N1    C2     sing N N 64  
C   N1    C6     sing N N 65  
C   C2    O2     doub N N 66  
C   C2    N3     sing N N 67  
C   N3    C4     doub N N 68  
C   C4    N4     sing N N 69  
C   C4    C5     sing N N 70  
C   N4    H41    sing N N 71  
C   N4    H42    sing N N 72  
C   C5    C6     doub N N 73  
C   C5    H5     sing N N 74  
C   C6    H6     sing N N 75  
DG  OP3   P      sing N N 76  
DG  OP3   HOP3   sing N N 77  
DG  P     OP1    doub N N 78  
DG  P     OP2    sing N N 79  
DG  P     "O5'"  sing N N 80  
DG  OP2   HOP2   sing N N 81  
DG  "O5'" "C5'"  sing N N 82  
DG  "C5'" "C4'"  sing N N 83  
DG  "C5'" "H5'"  sing N N 84  
DG  "C5'" "H5''" sing N N 85  
DG  "C4'" "O4'"  sing N N 86  
DG  "C4'" "C3'"  sing N N 87  
DG  "C4'" "H4'"  sing N N 88  
DG  "O4'" "C1'"  sing N N 89  
DG  "C3'" "O3'"  sing N N 90  
DG  "C3'" "C2'"  sing N N 91  
DG  "C3'" "H3'"  sing N N 92  
DG  "O3'" "HO3'" sing N N 93  
DG  "C2'" "C1'"  sing N N 94  
DG  "C2'" "H2'"  sing N N 95  
DG  "C2'" "H2''" sing N N 96  
DG  "C1'" N9     sing N N 97  
DG  "C1'" "H1'"  sing N N 98  
DG  N9    C8     sing Y N 99  
DG  N9    C4     sing Y N 100 
DG  C8    N7     doub Y N 101 
DG  C8    H8     sing N N 102 
DG  N7    C5     sing Y N 103 
DG  C5    C6     sing N N 104 
DG  C5    C4     doub Y N 105 
DG  C6    O6     doub N N 106 
DG  C6    N1     sing N N 107 
DG  N1    C2     sing N N 108 
DG  N1    H1     sing N N 109 
DG  C2    N2     sing N N 110 
DG  C2    N3     doub N N 111 
DG  N2    H21    sing N N 112 
DG  N2    H22    sing N N 113 
DG  N3    C4     sing N N 114 
G   OP3   P      sing N N 115 
G   OP3   HOP3   sing N N 116 
G   P     OP1    doub N N 117 
G   P     OP2    sing N N 118 
G   P     "O5'"  sing N N 119 
G   OP2   HOP2   sing N N 120 
G   "O5'" "C5'"  sing N N 121 
G   "C5'" "C4'"  sing N N 122 
G   "C5'" "H5'"  sing N N 123 
G   "C5'" "H5''" sing N N 124 
G   "C4'" "O4'"  sing N N 125 
G   "C4'" "C3'"  sing N N 126 
G   "C4'" "H4'"  sing N N 127 
G   "O4'" "C1'"  sing N N 128 
G   "C3'" "O3'"  sing N N 129 
G   "C3'" "C2'"  sing N N 130 
G   "C3'" "H3'"  sing N N 131 
G   "O3'" "HO3'" sing N N 132 
G   "C2'" "O2'"  sing N N 133 
G   "C2'" "C1'"  sing N N 134 
G   "C2'" "H2'"  sing N N 135 
G   "O2'" "HO2'" sing N N 136 
G   "C1'" N9     sing N N 137 
G   "C1'" "H1'"  sing N N 138 
G   N9    C8     sing Y N 139 
G   N9    C4     sing Y N 140 
G   C8    N7     doub Y N 141 
G   C8    H8     sing N N 142 
G   N7    C5     sing Y N 143 
G   C5    C6     sing N N 144 
G   C5    C4     doub Y N 145 
G   C6    O6     doub N N 146 
G   C6    N1     sing N N 147 
G   N1    C2     sing N N 148 
G   N1    H1     sing N N 149 
G   C2    N2     sing N N 150 
G   C2    N3     doub N N 151 
G   N2    H21    sing N N 152 
G   N2    H22    sing N N 153 
G   N3    C4     sing N N 154 
G46 P     O1P    sing N N 155 
G46 P     S2P    sing N N 156 
G46 P     O3P    doub N N 157 
G46 P     "O5'"  sing N N 158 
G46 O1P   H1P    sing N N 159 
G46 S2P   HS     sing N N 160 
G46 "O5'" "C5'"  sing N N 161 
G46 "C5'" "C4'"  sing N N 162 
G46 "C5'" "H5'1" sing N N 163 
G46 "C5'" "H5'2" sing N N 164 
G46 "C4'" "O4'"  sing N N 165 
G46 "C4'" "C3'"  sing N N 166 
G46 "C4'" "H4'"  sing N N 167 
G46 "O4'" "C1'"  sing N N 168 
G46 "C3'" "O3'"  sing N N 169 
G46 "C3'" "C2'"  sing N N 170 
G46 "C3'" "H3'"  sing N N 171 
G46 "O3'" HA     sing N N 172 
G46 "C2'" "C1'"  sing N N 173 
G46 "C2'" "O2'"  sing N N 174 
G46 "C2'" "H2'"  sing N N 175 
G46 "C1'" N9     sing N N 176 
G46 "C1'" "H1'"  sing N N 177 
G46 "O2'" HB     sing N N 178 
G46 N9    C8     sing Y N 179 
G46 N9    C4     sing Y N 180 
G46 C8    N7     doub Y N 181 
G46 C8    H8     sing N N 182 
G46 N7    C5     sing Y N 183 
G46 C5    C6     sing N N 184 
G46 C5    C4     doub Y N 185 
G46 C6    O6     doub N N 186 
G46 C6    N1     sing N N 187 
G46 N1    C2     sing N N 188 
G46 N1    H1     sing N N 189 
G46 C2    N2     sing N N 190 
G46 C2    N3     doub N N 191 
G46 N2    H2N1   sing N N 192 
G46 N2    H2N2   sing N N 193 
G46 N3    C4     sing N N 194 
HOH O     H1     sing N N 195 
HOH O     H2     sing N N 196 
U   OP3   P      sing N N 197 
U   OP3   HOP3   sing N N 198 
U   P     OP1    doub N N 199 
U   P     OP2    sing N N 200 
U   P     "O5'"  sing N N 201 
U   OP2   HOP2   sing N N 202 
U   "O5'" "C5'"  sing N N 203 
U   "C5'" "C4'"  sing N N 204 
U   "C5'" "H5'"  sing N N 205 
U   "C5'" "H5''" sing N N 206 
U   "C4'" "O4'"  sing N N 207 
U   "C4'" "C3'"  sing N N 208 
U   "C4'" "H4'"  sing N N 209 
U   "O4'" "C1'"  sing N N 210 
U   "C3'" "O3'"  sing N N 211 
U   "C3'" "C2'"  sing N N 212 
U   "C3'" "H3'"  sing N N 213 
U   "O3'" "HO3'" sing N N 214 
U   "C2'" "O2'"  sing N N 215 
U   "C2'" "C1'"  sing N N 216 
U   "C2'" "H2'"  sing N N 217 
U   "O2'" "HO2'" sing N N 218 
U   "C1'" N1     sing N N 219 
U   "C1'" "H1'"  sing N N 220 
U   N1    C2     sing N N 221 
U   N1    C6     sing N N 222 
U   C2    O2     doub N N 223 
U   C2    N3     sing N N 224 
U   N3    C4     sing N N 225 
U   N3    H3     sing N N 226 
U   C4    O4     doub N N 227 
U   C4    C5     sing N N 228 
U   C5    C6     doub N N 229 
U   C5    H5     sing N N 230 
U   C6    H6     sing N N 231 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
354D 'double helix'         
354D 'a-form double helix'  
354D 'mismatched base pair' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A C 1  1_555 B G46 11 1_555 0.036  -0.050 -0.072 4.749  -2.863  -2.171  1  A_C70:G46106_B A 70 ? B 106 ? 19 1  
1 A C 2  1_555 B DG  10 1_555 0.274  -0.112 -0.184 2.743  -5.378  0.210   2  A_C71:DG105_B  A 71 ? B 105 ? 19 1  
1 A G 3  1_555 B A   9  1_555 6.939  -4.314 -0.206 -0.762 -2.603  -3.354  3  A_G72:A104_B   A 72 ? B 104 ? 11 10 
1 A A 4  1_555 B U   8  1_555 -4.320 -2.267 -0.681 -2.256 -16.357 -89.324 4  A_A73:U103_B   A 73 ? B 103 ? 24 4  
1 A U 5  1_555 B G   7  1_555 -4.704 0.408  -0.221 -2.394 -9.581  -52.681 5  A_U74:G102_B   A 74 ? B 102 ? ?  1  
1 A G 6  1_555 B A   6  1_555 -0.534 3.057  -0.348 -0.999 -6.988  -63.638 6  A_G75:A101_B   A 75 ? B 101 ? ?  ?  
1 A G 7  1_555 B G   5  1_555 3.977  1.254  -0.124 5.979  -8.561  -66.267 7  A_G76:G100_B   A 76 ? B 100 ? ?  ?  
1 A U 8  1_555 B A   4  1_555 4.277  -2.134 -0.721 2.297  -20.545 -95.647 8  A_U77:A99_B    A 77 ? B 99  ? 24 4  
1 A A 9  1_555 B G   3  1_555 -6.976 -4.202 -0.227 -0.309 -3.249  -0.434  9  A_A78:G98_B    A 78 ? B 98  ? 11 9  
1 A G 10 1_555 B C   2  1_555 -0.280 -0.048 -0.140 -1.630 -4.944  -1.749  10 A_G79:C97_B    A 79 ? B 97  ? 19 1  
1 A U 11 1_555 B G   1  1_555 2.358  -0.529 -0.183 2.962  -2.263  -3.999  11 A_U80:G96_B    A 80 ? B 96  ? 28 ?  
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A C 1  1_555 B G46 11 1_555 A C 2  1_555 B DG 10 1_555 -0.164 -2.326 3.410 -0.615 1.533  31.319  -4.600 0.185   3.298 2.837   
1.137  31.362  1  AA_C70C71:DG105G46106_BB A 70 ? B 106 ? A 71 ? B 105 ? 
1 A C 2  1_555 B DG  10 1_555 A G 3  1_555 B A  9  1_555 -0.531 -0.928 3.582 2.208  3.066  61.783  -1.056 0.627   3.518 2.983   
-2.148 61.887  2  AA_C71G72:A104DG105_BB   A 71 ? B 105 ? A 72 ? B 104 ? 
1 A G 3  1_555 B A   9  1_555 A A 4  1_555 B U  8  1_555 -4.645 -1.318 3.447 -1.921 3.346  -16.508 2.270  -17.023 3.093 -11.451 
-6.573 -16.949 3  AA_G72A73:U103A104_BB    A 72 ? B 104 ? A 73 ? B 103 ? 
1 A A 4  1_555 B U   8  1_555 A U 5  1_555 B G  7  1_555 1.905  -2.351 3.224 2.110  -0.022 45.873  -3.012 -2.260  3.305 -0.028  
-2.705 45.919  4  AA_A73U74:G102U103_BB    A 73 ? B 103 ? A 74 ? B 102 ? 
1 A U 5  1_555 B G   7  1_555 A G 6  1_555 B A  6  1_555 -0.488 -2.662 3.413 -1.343 7.024  46.092  -3.946 0.506   3.011 8.908   
1.703  46.613  5  AA_U74G75:A101G102_BB    A 74 ? B 102 ? A 75 ? B 101 ? 
1 A G 6  1_555 B A   6  1_555 A G 7  1_555 B G  5  1_555 -0.469 -2.552 3.221 -1.483 3.379  46.646  -3.484 0.472   3.052 4.259   
1.870  46.784  6  AA_G75G76:G100A101_BB    A 75 ? B 101 ? A 76 ? B 100 ? 
1 A G 7  1_555 B G   5  1_555 A U 8  1_555 B A  4  1_555 -0.880 -2.548 3.314 0.859  0.200  48.137  -3.139 1.147   3.289 0.245   
-1.052 48.145  7  AA_G76U77:A99G100_BB     A 76 ? B 100 ? A 77 ? B 99  ? 
1 A U 8  1_555 B A   4  1_555 A A 9  1_555 B G  3  1_555 5.108  -1.521 3.464 2.245  1.815  -15.118 4.285  20.796  2.841 -6.818  
8.433  -15.390 8  AA_U77A78:G98A99_BB      A 77 ? B 99  ? A 78 ? B 98  ? 
1 A A 9  1_555 B G   3  1_555 A G 10 1_555 B C  2  1_555 -0.013 -0.941 3.542 -1.731 2.568  61.551  -1.048 -0.074  3.504 2.508   
1.690  61.621  9  AA_A78G79:C97G98_BB      A 78 ? B 98  ? A 79 ? B 97  ? 
1 A G 10 1_555 B C   2  1_555 A U 11 1_555 B G  1  1_555 0.088  -1.981 3.314 0.806  1.947  38.099  -3.275 -0.032  3.214 2.980   
-1.234 38.155  10 AA_G79U80:G96C97_BB      A 79 ? B 97  ? A 80 ? B 96  ? 
# 
_atom_sites.entry_id                    354D 
_atom_sites.fract_transf_matrix[1][1]   0.014048 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.004002 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.026558 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.031562 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
O  
P  
S  
# 
loop_