HEADER LYASE 21-MAY-26 35YG TITLE CRYSTAL STRUCTURE OF PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE FROM TITLE 2 BURKHOLDERIA XENOVORANS (APO) COMPND MOL_ID: 1; COMPND 2 MOLECULE: N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 9-397; COMPND 5 SYNONYM: N5-CAIR SYNTHASE,5-(CARBOXYAMINO)IMIDAZOLE RIBONUCLEOTIDE COMPND 6 SYNTHETASE; COMPND 7 EC: 6.3.4.18; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARABURKHOLDERIA XENOVORANS LB400; SOURCE 3 ORGANISM_TAXID: 266265; SOURCE 4 GENE: PURK, BXE_A0694; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: BUXEA.00036.A.B2 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, TRANSFERASE, PHOSPHORIBOSYLAMINOIMIDAZOLE KEYWDS 3 CARBOXYLASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 03-JUN-26 35YG 0 JRNL AUTH L.LIU,S.LOVELL,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF PHOSPHORIBOSYLAMINOIMIDAZOLE JRNL TITL 2 CARBOXYLASE FROM BURKHOLDERIA XENOVORANS (APO) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_6065: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2800 - 5.3100 1.00 2621 138 0.2173 0.2397 REMARK 3 2 5.3100 - 4.2200 1.00 2597 122 0.1873 0.2142 REMARK 3 3 4.2200 - 3.6900 1.00 2547 140 0.2025 0.2345 REMARK 3 4 3.6800 - 3.3500 1.00 2565 153 0.2134 0.2535 REMARK 3 5 3.3500 - 3.1100 1.00 2540 137 0.2351 0.3511 REMARK 3 6 3.1100 - 2.9300 1.00 2553 138 0.2739 0.3202 REMARK 3 7 2.9300 - 2.7800 1.00 2555 128 0.2576 0.3492 REMARK 3 8 2.7800 - 2.6600 1.00 2544 125 0.2617 0.3155 REMARK 3 9 2.6600 - 2.5600 1.00 2568 134 0.2654 0.2912 REMARK 3 10 2.5600 - 2.4700 1.00 2497 141 0.2914 0.4034 REMARK 3 11 2.4700 - 2.3900 1.00 2571 131 0.3144 0.3764 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5779 REMARK 3 ANGLE : 0.554 7884 REMARK 3 CHIRALITY : 0.043 914 REMARK 3 PLANARITY : 0.006 1042 REMARK 3 DIHEDRAL : 15.023 2046 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.1039 10.7907 3.6335 REMARK 3 T TENSOR REMARK 3 T11: 0.2943 T22: 0.2638 REMARK 3 T33: 0.2659 T12: -0.0553 REMARK 3 T13: -0.0195 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.5689 L22: 1.7847 REMARK 3 L33: 3.6436 L12: 0.3175 REMARK 3 L13: 0.0233 L23: -0.3868 REMARK 3 S TENSOR REMARK 3 S11: -0.2662 S12: 0.0106 S13: -0.2409 REMARK 3 S21: -0.1886 S22: 0.1163 S23: 0.1051 REMARK 3 S31: 0.4658 S32: -0.2501 S33: 0.1386 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.2865 -16.1526 1.2565 REMARK 3 T TENSOR REMARK 3 T11: 1.0590 T22: 0.4043 REMARK 3 T33: 0.6334 T12: 0.1542 REMARK 3 T13: 0.2357 T23: 0.0920 REMARK 3 L TENSOR REMARK 3 L11: 1.0198 L22: 1.1630 REMARK 3 L33: 0.2467 L12: 0.4389 REMARK 3 L13: -0.4913 L23: -0.0943 REMARK 3 S TENSOR REMARK 3 S11: -0.4520 S12: -0.0707 S13: -0.5287 REMARK 3 S21: -0.4355 S22: 0.0871 S23: -0.2464 REMARK 3 S31: 0.9516 S32: 0.2040 S33: 0.2371 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2166 2.0045 11.8850 REMARK 3 T TENSOR REMARK 3 T11: 0.4062 T22: 0.3420 REMARK 3 T33: 0.3608 T12: 0.0807 REMARK 3 T13: 0.0157 T23: 0.0755 REMARK 3 L TENSOR REMARK 3 L11: 0.4389 L22: 1.2714 REMARK 3 L33: 2.4082 L12: 0.1408 REMARK 3 L13: -0.3675 L23: -0.0549 REMARK 3 S TENSOR REMARK 3 S11: -0.1030 S12: -0.0887 S13: -0.1667 REMARK 3 S21: -0.0863 S22: -0.0729 S23: -0.1620 REMARK 3 S31: 0.4996 S32: 0.3516 S33: 0.1652 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 358 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4504 3.6429 25.9513 REMARK 3 T TENSOR REMARK 3 T11: 0.4146 T22: 0.2956 REMARK 3 T33: 0.3015 T12: -0.0212 REMARK 3 T13: -0.0214 T23: 0.0427 REMARK 3 L TENSOR REMARK 3 L11: 4.3854 L22: 3.2930 REMARK 3 L33: 3.4852 L12: 1.3313 REMARK 3 L13: 1.0104 L23: -0.9731 REMARK 3 S TENSOR REMARK 3 S11: 0.1819 S12: -0.4300 S13: -0.2105 REMARK 3 S21: 0.2275 S22: -0.2563 S23: -0.3798 REMARK 3 S31: 0.4128 S32: 0.2243 S33: 0.0274 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.1131 20.2837 24.3063 REMARK 3 T TENSOR REMARK 3 T11: 0.2510 T22: 0.2891 REMARK 3 T33: 0.3076 T12: 0.0089 REMARK 3 T13: -0.0212 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.3067 L22: 3.5576 REMARK 3 L33: 1.3533 L12: 0.9463 REMARK 3 L13: -0.8928 L23: -0.8811 REMARK 3 S TENSOR REMARK 3 S11: 0.0460 S12: -0.0177 S13: -0.0804 REMARK 3 S21: 0.2445 S22: 0.0518 S23: 0.3644 REMARK 3 S31: -0.2016 S32: -0.1080 S33: 0.0555 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.0054 28.5908 23.9790 REMARK 3 T TENSOR REMARK 3 T11: 0.2940 T22: 0.3160 REMARK 3 T33: 0.2684 T12: 0.0200 REMARK 3 T13: -0.0398 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 2.2966 L22: 1.8683 REMARK 3 L33: 4.5693 L12: -0.7472 REMARK 3 L13: -0.5249 L23: 0.1525 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.1636 S13: 0.2675 REMARK 3 S21: 0.0775 S22: 0.0875 S23: 0.0944 REMARK 3 S31: -0.4367 S32: -0.6565 S33: -0.0629 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9099 52.9801 29.0510 REMARK 3 T TENSOR REMARK 3 T11: 0.3638 T22: 0.3855 REMARK 3 T33: 0.4241 T12: -0.0002 REMARK 3 T13: -0.0812 T23: 0.0550 REMARK 3 L TENSOR REMARK 3 L11: 0.8079 L22: 1.4511 REMARK 3 L33: 1.9427 L12: -1.0945 REMARK 3 L13: 0.3157 L23: -0.3558 REMARK 3 S TENSOR REMARK 3 S11: -0.1195 S12: 0.0434 S13: 0.4054 REMARK 3 S21: 0.2305 S22: 0.0268 S23: -0.3115 REMARK 3 S31: -0.2957 S32: -0.2678 S33: 0.1039 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 207 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7416 33.6538 20.0972 REMARK 3 T TENSOR REMARK 3 T11: 0.2438 T22: 0.3024 REMARK 3 T33: 0.2612 T12: 0.0039 REMARK 3 T13: -0.0511 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 0.5072 L22: 0.8777 REMARK 3 L33: 1.3477 L12: 0.2029 REMARK 3 L13: 0.0463 L23: 0.6083 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: -0.0357 S13: 0.0492 REMARK 3 S21: 0.0588 S22: -0.0759 S23: -0.0192 REMARK 3 S31: -0.0477 S32: 0.0582 S33: 0.0233 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 358 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9746 33.7826 6.5369 REMARK 3 T TENSOR REMARK 3 T11: 0.2874 T22: 0.2366 REMARK 3 T33: 0.2895 T12: 0.0025 REMARK 3 T13: 0.0110 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 4.1445 L22: 4.5453 REMARK 3 L33: 3.3006 L12: -1.2133 REMARK 3 L13: -0.4880 L23: -0.4427 REMARK 3 S TENSOR REMARK 3 S11: 0.1362 S12: 0.3636 S13: 0.0838 REMARK 3 S21: -0.3996 S22: -0.0982 S23: -0.4749 REMARK 3 S31: -0.5561 S32: 0.1722 S33: -0.0104 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 35YG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-26. REMARK 100 THE DEPOSITION ID IS D_1000308257. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-26 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29662 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 47.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 1.29500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM SULFATE, 100 MM HEPES REMARK 280 PH 7.5, 32.5% PEG 3350. BUXEA.00036.A.B2.PW39468 AT 23.8 MG/ML. REMARK 280 PLATE LIU-S-210 D11, PUCK: PSL-0213, CRYO: 200 MM AMMONIUM REMARK 280 SULFATE, 100 MM HEPES PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 85.65050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.06400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 85.65050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.06400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 SER A 136 REMARK 465 ASP A 137 REMARK 465 GLY A 161 REMARK 465 TYR A 162 REMARK 465 ASP A 163 REMARK 465 GLY A 164 REMARK 465 LYS A 165 REMARK 465 THR A 397 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 TYR B 162 REMARK 465 ASP B 163 REMARK 465 GLY B 164 REMARK 465 LYS B 165 REMARK 465 THR B 397 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 85 CG OD1 ND2 REMARK 470 VAL A 131 CG1 CG2 REMARK 470 LEU A 139 CG CD1 CD2 REMARK 470 LEU A 142 CG CD1 CD2 REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 ARG A 159 CG CD NE CZ NH1 NH2 REMARK 470 MET A 160 CG SD CE REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 ARG A 177 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 LEU A 190 CG CD1 CD2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 ARG A 223 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 336 CG CD CE NZ REMARK 470 GLU A 361 CG CD OE1 OE2 REMARK 470 HIS B 5 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 6 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 7 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 8 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 137 CG OD1 OD2 REMARK 470 ASP B 143 CG OD1 OD2 REMARK 470 LYS B 146 CG CD CE NZ REMARK 470 ARG B 159 CG CD NE CZ NH1 NH2 REMARK 470 MET B 160 CG SD CE REMARK 470 ARG B 223 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 361 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 85 35.40 -99.55 REMARK 500 HIS B 7 136.11 -172.66 REMARK 500 MET B 160 -170.66 69.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 35YG A 9 397 UNP Q13UJ9 Q13UJ9_PARXL 9 397 DBREF 35YG B 9 397 UNP Q13UJ9 Q13UJ9_PARXL 9 397 SEQADV 35YG MET A 1 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG ALA A 2 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS A 3 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS A 4 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS A 5 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS A 6 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS A 7 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS A 8 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG MET B 1 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG ALA B 2 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS B 3 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS B 4 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS B 5 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS B 6 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS B 7 UNP Q13UJ9 EXPRESSION TAG SEQADV 35YG HIS B 8 UNP Q13UJ9 EXPRESSION TAG SEQRES 1 A 397 MET ALA HIS HIS HIS HIS HIS HIS SER PRO ILE LEU PRO SEQRES 2 A 397 GLY ALA TRP LEU GLY MET VAL GLY GLY GLY GLN LEU GLY SEQRES 3 A 397 ARG MET PHE CYS PHE ALA ALA GLN ALA MET GLY TYR ARG SEQRES 4 A 397 VAL ALA VAL LEU ASP PRO ASP GLU ASN SER PRO ALA GLY SEQRES 5 A 397 ALA VAL ALA ASP ARG HIS LEU ARG ALA ALA TYR ASN ASP SEQRES 6 A 397 GLU ALA SER LEU THR GLU LEU ALA ARG LEU CYS ALA ALA SEQRES 7 A 397 VAL SER THR GLU PHE GLU ASN VAL PRO ALA ALA SER LEU SEQRES 8 A 397 ASP PHE LEU ALA ARG THR THR PHE VAL SER PRO ALA GLY SEQRES 9 A 397 ARG CYS VAL ALA VAL ALA GLN ASP ARG ILE ALA GLU LYS SEQRES 10 A 397 ARG PHE ILE ALA SER SER GLY VAL THR VAL ALA PRO HIS SEQRES 11 A 397 VAL VAL ILE GLU SER SER ASP ALA LEU ALA ALA LEU ASP SEQRES 12 A 397 ASP ALA LYS LEU GLU ALA VAL LEU PRO GLY ILE LEU LYS SEQRES 13 A 397 THR ALA ARG MET GLY TYR ASP GLY LYS GLY GLN ILE ARG SEQRES 14 A 397 VAL ARG ASN ALA GLU GLU VAL ARG GLU ALA HIS ALA SER SEQRES 15 A 397 LEU ALA GLY VAL PRO CYS VAL LEU GLU LYS ARG LEU PRO SEQRES 16 A 397 LEU LYS PHE GLU VAL SER ALA LEU ILE ALA ARG ALA ALA SEQRES 17 A 397 SER GLY ALA SER VAL VAL TYR PRO LEU ALA GLN ASN THR SEQRES 18 A 397 HIS ARG ASP GLY VAL LEU SER HIS THR ILE VAL PRO ALA SEQRES 19 A 397 PRO ASP ALA SER PRO THR LEU VAL GLN GLN ALA GLN GLN SEQRES 20 A 397 ALA ALA LEU GLN ILE ALA ASP LYS LEU GLY TYR VAL GLY SEQRES 21 A 397 VAL LEU CYS VAL GLU PHE PHE ILE LEU GLU ASP GLY SER SEQRES 22 A 397 LEU VAL ALA ASN GLU MET ALA PRO ARG PRO HIS ASN SER SEQRES 23 A 397 GLY HIS TYR THR VAL ASP ALA CYS ALA THR SER GLN PHE SEQRES 24 A 397 GLU GLN GLN VAL ARG ALA MET THR GLY MET PRO LEU GLY SEQRES 25 A 397 ASP THR ARG GLN HIS SER PRO ALA VAL MET LEU ASN ILE SEQRES 26 A 397 LEU GLY ASP VAL TRP PHE PRO ASP GLY PRO LYS ARG PRO SEQRES 27 A 397 ALA VAL THR PRO PRO TRP GLN GLU VAL ALA ALA MET PRO SEQRES 28 A 397 ALA ALA ARG LEU HIS LEU TYR GLY LYS GLU GLU ALA ARG SEQRES 29 A 397 CYS GLY ARG LYS MET GLY HIS VAL ASN PHE THR ALA ALA SEQRES 30 A 397 THR LEU GLU GLU ALA ARG THR ALA ALA ARG ASP CYS ALA SEQRES 31 A 397 ARG LEU LEU HIS ILE ILE THR SEQRES 1 B 397 MET ALA HIS HIS HIS HIS HIS HIS SER PRO ILE LEU PRO SEQRES 2 B 397 GLY ALA TRP LEU GLY MET VAL GLY GLY GLY GLN LEU GLY SEQRES 3 B 397 ARG MET PHE CYS PHE ALA ALA GLN ALA MET GLY TYR ARG SEQRES 4 B 397 VAL ALA VAL LEU ASP PRO ASP GLU ASN SER PRO ALA GLY SEQRES 5 B 397 ALA VAL ALA ASP ARG HIS LEU ARG ALA ALA TYR ASN ASP SEQRES 6 B 397 GLU ALA SER LEU THR GLU LEU ALA ARG LEU CYS ALA ALA SEQRES 7 B 397 VAL SER THR GLU PHE GLU ASN VAL PRO ALA ALA SER LEU SEQRES 8 B 397 ASP PHE LEU ALA ARG THR THR PHE VAL SER PRO ALA GLY SEQRES 9 B 397 ARG CYS VAL ALA VAL ALA GLN ASP ARG ILE ALA GLU LYS SEQRES 10 B 397 ARG PHE ILE ALA SER SER GLY VAL THR VAL ALA PRO HIS SEQRES 11 B 397 VAL VAL ILE GLU SER SER ASP ALA LEU ALA ALA LEU ASP SEQRES 12 B 397 ASP ALA LYS LEU GLU ALA VAL LEU PRO GLY ILE LEU LYS SEQRES 13 B 397 THR ALA ARG MET GLY TYR ASP GLY LYS GLY GLN ILE ARG SEQRES 14 B 397 VAL ARG ASN ALA GLU GLU VAL ARG GLU ALA HIS ALA SER SEQRES 15 B 397 LEU ALA GLY VAL PRO CYS VAL LEU GLU LYS ARG LEU PRO SEQRES 16 B 397 LEU LYS PHE GLU VAL SER ALA LEU ILE ALA ARG ALA ALA SEQRES 17 B 397 SER GLY ALA SER VAL VAL TYR PRO LEU ALA GLN ASN THR SEQRES 18 B 397 HIS ARG ASP GLY VAL LEU SER HIS THR ILE VAL PRO ALA SEQRES 19 B 397 PRO ASP ALA SER PRO THR LEU VAL GLN GLN ALA GLN GLN SEQRES 20 B 397 ALA ALA LEU GLN ILE ALA ASP LYS LEU GLY TYR VAL GLY SEQRES 21 B 397 VAL LEU CYS VAL GLU PHE PHE ILE LEU GLU ASP GLY SER SEQRES 22 B 397 LEU VAL ALA ASN GLU MET ALA PRO ARG PRO HIS ASN SER SEQRES 23 B 397 GLY HIS TYR THR VAL ASP ALA CYS ALA THR SER GLN PHE SEQRES 24 B 397 GLU GLN GLN VAL ARG ALA MET THR GLY MET PRO LEU GLY SEQRES 25 B 397 ASP THR ARG GLN HIS SER PRO ALA VAL MET LEU ASN ILE SEQRES 26 B 397 LEU GLY ASP VAL TRP PHE PRO ASP GLY PRO LYS ARG PRO SEQRES 27 B 397 ALA VAL THR PRO PRO TRP GLN GLU VAL ALA ALA MET PRO SEQRES 28 B 397 ALA ALA ARG LEU HIS LEU TYR GLY LYS GLU GLU ALA ARG SEQRES 29 B 397 CYS GLY ARG LYS MET GLY HIS VAL ASN PHE THR ALA ALA SEQRES 30 B 397 THR LEU GLU GLU ALA ARG THR ALA ALA ARG ASP CYS ALA SEQRES 31 B 397 ARG LEU LEU HIS ILE ILE THR HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 B 401 5 HET SO4 B 402 5 HET SO4 B 403 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 HOH *99(H2 O) HELIX 1 AA1 GLY A 23 MET A 36 1 14 HELIX 2 AA2 SER A 49 ALA A 55 1 7 HELIX 3 AA3 ASP A 65 CYS A 76 1 12 HELIX 4 AA4 PRO A 87 ARG A 96 1 10 HELIX 5 AA5 ALA A 103 ASP A 112 1 10 HELIX 6 AA6 ASP A 112 SER A 123 1 12 HELIX 7 AA7 ASP A 143 LEU A 151 1 9 HELIX 8 AA8 ASN A 172 LEU A 183 1 12 HELIX 9 AA9 SER A 238 GLY A 257 1 20 HELIX 10 AB1 HIS A 284 HIS A 288 5 5 HELIX 11 AB2 TYR A 289 CYS A 294 1 6 HELIX 12 AB3 SER A 297 GLY A 308 1 12 HELIX 13 AB4 ASP A 328 PHE A 331 5 4 HELIX 14 AB5 PRO A 343 ALA A 349 1 7 HELIX 15 AB6 THR A 378 LEU A 393 1 16 HELIX 16 AB7 GLY B 23 GLY B 37 1 15 HELIX 17 AB8 SER B 49 ALA B 55 1 7 HELIX 18 AB9 ASP B 65 CYS B 76 1 12 HELIX 19 AC1 PRO B 87 ARG B 96 1 10 HELIX 20 AC2 ALA B 103 ASP B 112 1 10 HELIX 21 AC3 ASP B 112 SER B 123 1 12 HELIX 22 AC4 SER B 135 LEU B 142 1 8 HELIX 23 AC5 ASP B 143 LEU B 151 1 9 HELIX 24 AC6 ASN B 172 LEU B 183 1 12 HELIX 25 AC7 SER B 238 GLY B 257 1 20 HELIX 26 AC8 HIS B 284 HIS B 288 5 5 HELIX 27 AC9 TYR B 289 CYS B 294 1 6 HELIX 28 AD1 SER B 297 GLY B 308 1 12 HELIX 29 AD2 ASP B 328 PHE B 331 5 4 HELIX 30 AD3 PRO B 343 ALA B 349 1 7 HELIX 31 AD4 THR B 378 LEU B 393 1 16 SHEET 1 AA1 5 ARG A 57 LEU A 59 0 SHEET 2 AA1 5 ARG A 39 LEU A 43 1 N VAL A 42 O LEU A 59 SHEET 3 AA1 5 TRP A 16 VAL A 20 1 N MET A 19 O LEU A 43 SHEET 4 AA1 5 ALA A 78 THR A 81 1 O ALA A 78 N GLY A 18 SHEET 5 AA1 5 PHE A 99 VAL A 100 1 O PHE A 99 N VAL A 79 SHEET 1 AA2 4 HIS A 130 ILE A 133 0 SHEET 2 AA2 4 CYS A 188 LYS A 192 -1 O CYS A 188 N ILE A 133 SHEET 3 AA2 4 GLY A 153 THR A 157 -1 N ILE A 154 O GLU A 191 SHEET 4 AA2 4 ILE A 168 VAL A 170 -1 O VAL A 170 N GLY A 153 SHEET 1 AA3 4 SER A 212 VAL A 214 0 SHEET 2 AA3 4 LEU A 196 ARG A 206 -1 N ALA A 205 O VAL A 213 SHEET 3 AA3 4 GLY A 260 LEU A 269 -1 O LEU A 262 N ILE A 204 SHEET 4 AA3 4 LEU A 274 ALA A 280 -1 O GLU A 278 N GLU A 265 SHEET 1 AA4 7 SER A 212 VAL A 214 0 SHEET 2 AA4 7 LEU A 196 ARG A 206 -1 N ALA A 205 O VAL A 213 SHEET 3 AA4 7 ALA A 218 ARG A 223 -1 O ALA A 218 N SER A 201 SHEET 4 AA4 7 VAL A 226 VAL A 232 -1 O SER A 228 N THR A 221 SHEET 5 AA4 7 ALA A 320 LEU A 326 -1 O MET A 322 N THR A 230 SHEET 6 AA4 7 LYS A 368 THR A 375 -1 O GLY A 370 N ILE A 325 SHEET 7 AA4 7 ALA A 353 LEU A 357 -1 N ARG A 354 O ASN A 373 SHEET 1 AA5 5 ARG B 57 LEU B 59 0 SHEET 2 AA5 5 ARG B 39 LEU B 43 1 N VAL B 42 O ARG B 57 SHEET 3 AA5 5 TRP B 16 VAL B 20 1 N MET B 19 O LEU B 43 SHEET 4 AA5 5 ALA B 78 THR B 81 1 O ALA B 78 N GLY B 18 SHEET 5 AA5 5 PHE B 99 VAL B 100 1 O PHE B 99 N VAL B 79 SHEET 1 AA6 4 HIS B 130 ILE B 133 0 SHEET 2 AA6 4 CYS B 188 LYS B 192 -1 O CYS B 188 N ILE B 133 SHEET 3 AA6 4 GLY B 153 THR B 157 -1 N LYS B 156 O VAL B 189 SHEET 4 AA6 4 GLN B 167 VAL B 170 -1 O ILE B 168 N LEU B 155 SHEET 1 AA7 4 SER B 212 VAL B 214 0 SHEET 2 AA7 4 LEU B 196 ARG B 206 -1 N ALA B 205 O VAL B 213 SHEET 3 AA7 4 GLY B 260 LEU B 269 -1 O VAL B 264 N ALA B 202 SHEET 4 AA7 4 LEU B 274 ALA B 280 -1 O VAL B 275 N PHE B 267 SHEET 1 AA8 7 SER B 212 VAL B 214 0 SHEET 2 AA8 7 LEU B 196 ARG B 206 -1 N ALA B 205 O VAL B 213 SHEET 3 AA8 7 ALA B 218 ARG B 223 -1 O ALA B 218 N SER B 201 SHEET 4 AA8 7 VAL B 226 VAL B 232 -1 O SER B 228 N THR B 221 SHEET 5 AA8 7 ALA B 320 LEU B 326 -1 O ASN B 324 N SER B 228 SHEET 6 AA8 7 LYS B 368 THR B 375 -1 O VAL B 372 N LEU B 323 SHEET 7 AA8 7 ALA B 353 LEU B 357 -1 N HIS B 356 O HIS B 371 CISPEP 1 SER A 101 PRO A 102 0 4.45 CISPEP 2 LEU A 151 PRO A 152 0 -1.90 CISPEP 3 VAL A 232 PRO A 233 0 -1.16 CISPEP 4 SER B 101 PRO B 102 0 3.13 CISPEP 5 LEU B 151 PRO B 152 0 -2.11 CISPEP 6 VAL B 232 PRO B 233 0 -0.08 CRYST1 171.301 86.128 51.930 90.00 97.87 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005838 0.000000 0.000807 0.00000 SCALE2 0.000000 0.011611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019440 0.00000 CONECT 5645 5646 5647 5648 5649 CONECT 5646 5645 CONECT 5647 5645 CONECT 5648 5645 CONECT 5649 5645 CONECT 5650 5651 5652 5653 5654 CONECT 5651 5650 CONECT 5652 5650 CONECT 5653 5650 CONECT 5654 5650 CONECT 5655 5656 5657 5658 5659 CONECT 5656 5655 CONECT 5657 5655 CONECT 5658 5655 CONECT 5659 5655 CONECT 5660 5661 5662 5663 5664 CONECT 5661 5660 CONECT 5662 5660 CONECT 5663 5660 CONECT 5664 5660 CONECT 5665 5666 5667 5668 5669 CONECT 5666 5665 CONECT 5667 5665 CONECT 5668 5665 CONECT 5669 5665 CONECT 5670 5671 5672 5673 5674 CONECT 5671 5670 CONECT 5672 5670 CONECT 5673 5670 CONECT 5674 5670 MASTER 427 0 6 31 40 0 0 6 5771 2 30 62 END