HEADER DNA 26-NOV-97 363D TITLE HIGH-RESOLUTION CRYSTAL STRUCTURE OF A FULLY MODIFIED N3'-> P5' TITLE 2 PHOSPHORAMIDATE DNA DODECAMER DUPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM) COMPND 3 P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1 KEYWDS A-DNA, MODIFIED, DNA EXPDTA X-RAY DIFFRACTION AUTHOR V.TERESHKO,S.GRYAZNOV,M.EGLI REVDAT 7 03-APR-24 363D 1 REMARK REVDAT 6 21-FEB-24 363D 1 REMARK LINK REVDAT 5 16-NOV-11 363D 1 VERSN HETATM REVDAT 4 24-FEB-09 363D 1 VERSN REVDAT 3 28-JUN-02 363D 1 REMARK REVDAT 2 27-NOV-00 363D 5 REVDAT 1 15-DEC-97 363D 0 JRNL AUTH V.TERESHKO,S.GRYAZNOV,M.EGLI JRNL TITL CONSEQUENCES OF REPLACING THE DNA 3'-OXYGEN BY AN AMINO JRNL TITL 2 GROUP: HIGH-RESOLUTION CRYSTAL STRUCTURE OF A FULLY MODIFIED JRNL TITL 3 N3'--> P5' PHOSPHORAMIDATE DNA DODECAMER DUPLEX JRNL REF J.AM.CHEM.SOC. V. 120 269 1998 JRNL REFN ISSN 0002-7863 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 86.9 REMARK 3 NUMBER OF REFLECTIONS : 5854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 15.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 1458 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE CRYSTAL IS A PRECISE MEROHEDRAL TWIN AND THE REMARK 3 COORDINATES REPRESENT ONE COLUMN CONSISTING OF THREE REMARK 3 DODECAMER DUPLEXES (ALL ATOMS WITH OCCUPANCY 0.5, HALF REMARK 3 THE WATERS HAVE OCCUPANCY 1.0, THE OTHER HALF ZERO). REMARK 3 TOTAL NUMBER OF SOLVENT ATOMS REFERS TO R3 ASYMMETRIC UNIT. REMARK 4 REMARK 4 363D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000178833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-96 REMARK 200 TEMPERATURE (KELVIN) : 290.00 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6737 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 34.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: A-FORM DUPLEX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293.00K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 20.07500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 11.59031 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 101.40333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 20.07500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 11.59031 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 101.40333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 20.07500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 11.59031 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 101.40333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 20.07500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 11.59031 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 101.40333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 20.07500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 11.59031 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 101.40333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 20.07500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 11.59031 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 101.40333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 23.18061 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 202.80667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 23.18061 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 202.80667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 23.18061 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 202.80667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 23.18061 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 202.80667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 23.18061 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 202.80667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 23.18061 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 202.80667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 N NH4 A 237 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 A 239 LIES ON A SPECIAL POSITION. REMARK 375 CL CL A 255 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 A 226 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 A 228 LIES ON A SPECIAL POSITION. REMARK 375 CL CL A 250 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 B 238 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 B 240 LIES ON A SPECIAL POSITION. REMARK 375 CL CL B 256 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 B 225 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 B 227 LIES ON A SPECIAL POSITION. REMARK 375 CL CL B 249 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 C 243 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 C 245 LIES ON A SPECIAL POSITION. REMARK 375 CL CL C 259 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 C 244 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 C 248 LIES ON A SPECIAL POSITION. REMARK 375 CL CL C 260 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 D 242 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 D 246 LIES ON A SPECIAL POSITION. REMARK 375 CL CL D 258 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 D 241 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 D 247 LIES ON A SPECIAL POSITION. REMARK 375 CL CL D 257 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 E 229 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 E 235 LIES ON A SPECIAL POSITION. REMARK 375 CL CL E 251 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 E 230 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 E 234 LIES ON A SPECIAL POSITION. REMARK 375 CL CL E 252 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 F 232 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 F 231 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 F 236 LIES ON A SPECIAL POSITION. REMARK 375 CL CL F 254 LIES ON A SPECIAL POSITION. REMARK 375 N NH4 F 233 LIES ON A SPECIAL POSITION. REMARK 375 CL CL F 253 LIES ON A SPECIAL POSITION. REMARK 375 HOH E 381 LIES ON A SPECIAL POSITION. REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NH4 A 237 REMARK 615 NH4 A 239 REMARK 615 CL A 255 REMARK 615 NH4 B 238 REMARK 615 NH4 B 240 REMARK 615 CL B 256 REMARK 615 NH4 C 243 REMARK 615 NH4 C 245 REMARK 615 CL C 259 REMARK 615 NH4 C 244 REMARK 615 NH4 C 248 REMARK 615 CL C 260 REMARK 615 NH4 D 242 REMARK 615 NH4 D 246 REMARK 615 CL D 258 REMARK 615 NH4 D 241 REMARK 615 NH4 D 247 REMARK 615 CL D 257 REMARK 615 HOH A 403 REMARK 615 HOH A 404 REMARK 615 HOH A 405 REMARK 615 HOH A 406 REMARK 615 HOH A 410 REMARK 615 HOH A 411 REMARK 615 HOH A 414 REMARK 615 HOH A 415 REMARK 615 HOH A 417 REMARK 615 HOH A 419 REMARK 615 HOH A 423 REMARK 615 HOH A 425 REMARK 615 HOH A 426 REMARK 615 HOH A 428 REMARK 615 HOH A 431 REMARK 615 HOH A 492 REMARK 615 HOH A 499 REMARK 615 HOH B 407 REMARK 615 HOH B 408 REMARK 615 HOH B 409 REMARK 615 HOH B 412 REMARK 615 HOH B 413 REMARK 615 HOH B 416 REMARK 615 HOH B 420 REMARK 615 HOH B 421 REMARK 615 HOH B 422 REMARK 615 HOH B 424 REMARK 615 HOH B 427 REMARK 615 HOH B 429 REMARK 615 HOH B 430 REMARK 615 HOH B 493 REMARK 615 HOH B 495 REMARK 615 HOH B 498 REMARK 615 HOH C 418 REMARK 615 HOH C 440 REMARK 615 HOH C 441 REMARK 615 HOH C 442 REMARK 615 HOH C 443 REMARK 615 HOH C 444 REMARK 615 HOH C 445 REMARK 615 HOH C 446 REMARK 615 HOH C 448 REMARK 615 HOH C 449 REMARK 615 HOH C 450 REMARK 615 HOH C 452 REMARK 615 HOH C 454 REMARK 615 HOH C 456 REMARK 615 HOH C 457 REMARK 615 HOH C 459 REMARK 615 HOH C 462 REMARK 615 HOH C 463 REMARK 615 HOH C 465 REMARK 615 HOH C 466 REMARK 615 HOH C 467 REMARK 615 HOH C 470 REMARK 615 HOH C 483 REMARK 615 HOH C 484 REMARK 615 HOH C 486 REMARK 615 HOH D 432 REMARK 615 HOH D 433 REMARK 615 HOH D 434 REMARK 615 HOH D 435 REMARK 615 HOH D 436 REMARK 615 HOH D 437 REMARK 615 HOH D 438 REMARK 615 HOH D 439 REMARK 615 HOH D 447 REMARK 615 HOH D 451 REMARK 615 HOH D 453 REMARK 615 HOH D 455 REMARK 615 HOH D 458 REMARK 615 HOH D 460 REMARK 615 HOH D 461 REMARK 615 HOH D 464 REMARK 615 HOH D 468 REMARK 615 HOH D 469 REMARK 615 HOH D 471 REMARK 615 HOH D 472 REMARK 615 HOH D 473 REMARK 615 HOH D 474 REMARK 615 HOH D 475 REMARK 615 HOH D 476 REMARK 615 HOH D 477 REMARK 615 HOH D 478 REMARK 615 HOH D 479 REMARK 615 HOH D 480 REMARK 615 HOH D 481 REMARK 615 HOH D 482 REMARK 615 HOH D 485 REMARK 615 HOH D 487 REMARK 615 HOH D 488 REMARK 615 HOH D 497 REMARK 615 HOH D 500 REMARK 615 HOH E 491 REMARK 615 HOH F 489 REMARK 615 HOH F 490 REMARK 615 HOH F 494 REMARK 615 HOH F 496 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 A 226 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 A 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 B 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 B 227 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 E 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 E 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL E 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 E 230 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 E 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL E 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 F 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 F 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 F 236 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL F 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 F 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL F 253 DBREF 363D A 1 12 PDB 363D 363D 1 12 DBREF 363D B 13 24 PDB 363D 363D 13 24 DBREF 363D C 101 112 PDB 363D 363D 101 112 DBREF 363D D 113 124 PDB 363D 363D 113 124 DBREF 363D E 201 212 PDB 363D 363D 201 212 DBREF 363D F 213 224 PDB 363D 363D 213 224 SEQRES 1 A 12 C42 G38 C42 G38 A43 A43 NYM NYM C42 G38 C42 DG SEQRES 1 B 12 C42 G38 C42 G38 A43 A43 NYM NYM C42 G38 C42 DG SEQRES 1 C 12 C42 G38 C42 G38 A43 A43 NYM NYM C42 G38 C42 DG SEQRES 1 D 12 C42 G38 C42 G38 A43 A43 NYM NYM C42 G38 C42 DG SEQRES 1 E 12 C42 G38 C42 G38 A43 A43 NYM NYM C42 G38 C42 DG SEQRES 1 F 12 C42 G38 C42 G38 A43 A43 NYM NYM C42 G38 C42 DG MODRES 363D C42 A 1 DC MODRES 363D G38 A 2 DG MODRES 363D C42 A 3 DC MODRES 363D G38 A 4 DG MODRES 363D A43 A 5 DA MODRES 363D A43 A 6 DA MODRES 363D C42 A 9 DC MODRES 363D G38 A 10 DG MODRES 363D C42 A 11 DC MODRES 363D C42 B 13 DC MODRES 363D G38 B 14 DG MODRES 363D C42 B 15 DC MODRES 363D G38 B 16 DG MODRES 363D A43 B 17 DA MODRES 363D A43 B 18 DA MODRES 363D C42 B 21 DC MODRES 363D G38 B 22 DG MODRES 363D C42 B 23 DC MODRES 363D C42 C 101 DC MODRES 363D G38 C 102 DG MODRES 363D C42 C 103 DC MODRES 363D G38 C 104 DG MODRES 363D A43 C 105 DA MODRES 363D A43 C 106 DA MODRES 363D C42 C 109 DC MODRES 363D G38 C 110 DG MODRES 363D C42 C 111 DC MODRES 363D C42 D 113 DC MODRES 363D G38 D 114 DG MODRES 363D C42 D 115 DC MODRES 363D G38 D 116 DG MODRES 363D A43 D 117 DA MODRES 363D A43 D 118 DA MODRES 363D C42 D 121 DC MODRES 363D G38 D 122 DG MODRES 363D C42 D 123 DC MODRES 363D C42 E 201 DC MODRES 363D G38 E 202 DG MODRES 363D C42 E 203 DC MODRES 363D G38 E 204 DG MODRES 363D A43 E 205 DA MODRES 363D A43 E 206 DA MODRES 363D C42 E 209 DC MODRES 363D G38 E 210 DG MODRES 363D C42 E 211 DC MODRES 363D C42 F 213 DC MODRES 363D G38 F 214 DG MODRES 363D C42 F 215 DC MODRES 363D G38 F 216 DG MODRES 363D A43 F 217 DA MODRES 363D A43 F 218 DA MODRES 363D C42 F 221 DC MODRES 363D G38 F 222 DG MODRES 363D C42 F 223 DC HET C42 A 1 17 HET G38 A 2 23 HET C42 A 3 20 HET G38 A 4 23 HET A43 A 5 22 HET A43 A 6 22 HET NYM A 7 21 HET NYM A 8 21 HET C42 A 9 20 HET G38 A 10 23 HET C42 A 11 20 HET C42 B 13 17 HET G38 B 14 23 HET C42 B 15 20 HET G38 B 16 23 HET A43 B 17 22 HET A43 B 18 22 HET NYM B 19 21 HET NYM B 20 21 HET C42 B 21 20 HET G38 B 22 23 HET C42 B 23 20 HET C42 C 101 17 HET G38 C 102 23 HET C42 C 103 20 HET G38 C 104 23 HET A43 C 105 22 HET A43 C 106 22 HET NYM C 107 21 HET NYM C 108 21 HET C42 C 109 20 HET G38 C 110 23 HET C42 C 111 20 HET C42 D 113 17 HET G38 D 114 23 HET C42 D 115 20 HET G38 D 116 23 HET A43 D 117 22 HET A43 D 118 22 HET NYM D 119 21 HET NYM D 120 21 HET C42 D 121 20 HET G38 D 122 23 HET C42 D 123 20 HET C42 E 201 17 HET G38 E 202 23 HET C42 E 203 20 HET G38 E 204 23 HET A43 E 205 22 HET A43 E 206 22 HET NYM E 207 21 HET NYM E 208 21 HET C42 E 209 20 HET G38 E 210 23 HET C42 E 211 20 HET C42 F 213 17 HET G38 F 214 23 HET C42 F 215 20 HET G38 F 216 23 HET A43 F 217 22 HET A43 F 218 22 HET NYM F 219 21 HET NYM F 220 21 HET C42 F 221 20 HET G38 F 222 23 HET C42 F 223 20 HET NH4 A 237 1 HET NH4 A 239 1 HET CL A 255 1 HET NH4 A 226 1 HET NH4 A 228 1 HET CL A 250 1 HET NH4 B 238 1 HET NH4 B 240 1 HET CL B 256 1 HET NH4 B 225 1 HET NH4 B 227 1 HET CL B 249 1 HET NH4 C 243 1 HET NH4 C 245 1 HET CL C 259 1 HET NH4 C 244 1 HET NH4 C 248 1 HET CL C 260 1 HET NH4 D 242 1 HET NH4 D 246 1 HET CL D 258 1 HET NH4 D 241 1 HET NH4 D 247 1 HET CL D 257 1 HET NH4 E 229 1 HET NH4 E 235 1 HET CL E 251 1 HET NH4 E 230 1 HET NH4 E 234 1 HET CL E 252 1 HET NH4 F 232 1 HET NH4 F 231 1 HET NH4 F 236 1 HET CL F 254 1 HET NH4 F 233 1 HET CL F 253 1 HETNAM C42 3'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE HETNAM G38 3'-AMINO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM A43 3'-AMINO DEOXYADENOSINE 5'-MONOPHOSPHATE HETNAM NYM 3'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE HETNAM NH4 AMMONIUM ION HETNAM CL CHLORIDE ION HETSYN NYM PHOSPHORIC ACID MONO-[3-AMINO-5-(5-METHYL-2,4-DIOXO-3, HETSYN 2 NYM 4-DIHYDRO-2H-PYRIMIDIN-1-YL)-TETRAHYDRO-FURAN-2- HETSYN 3 NYM YLMETHYL] ESTER FORMUL 1 C42 24(C9 H15 N4 O6 P) FORMUL 1 G38 18(C10 H15 N6 O6 P) FORMUL 1 A43 12(C10 H15 N6 O5 P) FORMUL 1 NYM 12(C10 H16 N3 O7 P) FORMUL 7 NH4 24(H4 N 1+) FORMUL 9 CL 12(CL 1-) FORMUL 43 HOH *200(H2 O) LINK N C42 A 1 PA G38 A 2 1555 1555 1.62 LINK N G38 A 2 P C42 A 3 1555 1555 1.62 LINK N C42 A 3 PA G38 A 4 1555 1555 1.63 LINK N G38 A 4 P A43 A 5 1555 1555 1.62 LINK N A43 A 5 P A43 A 6 1555 1555 1.61 LINK N A43 A 6 P1 NYM A 7 1555 1555 1.62 LINK N3' NYM A 7 P1 NYM A 8 1555 1555 1.61 LINK N3' NYM A 8 P C42 A 9 1555 1555 1.64 LINK N C42 A 9 PA G38 A 10 1555 1555 1.60 LINK N G38 A 10 P C42 A 11 1555 1555 1.61 LINK N C42 A 11 P DG A 12 1555 1555 1.61 LINK N C42 B 13 PA G38 B 14 1555 1555 1.62 LINK N G38 B 14 P C42 B 15 1555 1555 1.62 LINK N C42 B 15 PA G38 B 16 1555 1555 1.62 LINK N G38 B 16 P A43 B 17 1555 1555 1.62 LINK N A43 B 17 P A43 B 18 1555 1555 1.62 LINK N A43 B 18 P1 NYM B 19 1555 1555 1.60 LINK N3' NYM B 19 P1 NYM B 20 1555 1555 1.63 LINK N3' NYM B 20 P C42 B 21 1555 1555 1.62 LINK N C42 B 21 PA G38 B 22 1555 1555 1.63 LINK N G38 B 22 P C42 B 23 1555 1555 1.61 LINK N C42 B 23 P DG B 24 1555 1555 1.61 LINK N C42 C 101 PA G38 C 102 1555 1555 1.61 LINK N G38 C 102 P C42 C 103 1555 1555 1.61 LINK N C42 C 103 PA G38 C 104 1555 1555 1.62 LINK N G38 C 104 P A43 C 105 1555 1555 1.63 LINK N A43 C 105 P A43 C 106 1555 1555 1.62 LINK N A43 C 106 P1 NYM C 107 1555 1555 1.61 LINK N3' NYM C 107 P1 NYM C 108 1555 1555 1.61 LINK N3' NYM C 108 P C42 C 109 1555 1555 1.62 LINK N C42 C 109 PA G38 C 110 1555 1555 1.62 LINK N G38 C 110 P C42 C 111 1555 1555 1.60 LINK N C42 C 111 P DG C 112 1555 1555 1.61 LINK N C42 D 113 PA G38 D 114 1555 1555 1.61 LINK N G38 D 114 P C42 D 115 1555 1555 1.61 LINK N C42 D 115 PA G38 D 116 1555 1555 1.62 LINK N G38 D 116 P A43 D 117 1555 1555 1.62 LINK N A43 D 117 P A43 D 118 1555 1555 1.62 LINK N A43 D 118 P1 NYM D 119 1555 1555 1.62 LINK N3' NYM D 119 P1 NYM D 120 1555 1555 1.62 LINK N3' NYM D 120 P C42 D 121 1555 1555 1.61 LINK N C42 D 121 PA G38 D 122 1555 1555 1.62 LINK N G38 D 122 P C42 D 123 1555 1555 1.63 LINK N C42 D 123 P DG D 124 1555 1555 1.61 LINK N C42 E 201 PA G38 E 202 1555 1555 1.62 LINK N G38 E 202 P C42 E 203 1555 1555 1.64 LINK N C42 E 203 PA G38 E 204 1555 1555 1.62 LINK N G38 E 204 P A43 E 205 1555 1555 1.62 LINK N A43 E 205 P A43 E 206 1555 1555 1.61 LINK N A43 E 206 P1 NYM E 207 1555 1555 1.62 LINK N3' NYM E 207 P1 NYM E 208 1555 1555 1.61 LINK N3' NYM E 208 P C42 E 209 1555 1555 1.61 LINK N C42 E 209 PA G38 E 210 1555 1555 1.62 LINK N G38 E 210 P C42 E 211 1555 1555 1.62 LINK N C42 E 211 P DG E 212 1555 1555 1.61 LINK N C42 F 213 PA G38 F 214 1555 1555 1.61 LINK N G38 F 214 P C42 F 215 1555 1555 1.61 LINK N C42 F 215 PA G38 F 216 1555 1555 1.61 LINK N G38 F 216 P A43 F 217 1555 1555 1.61 LINK N A43 F 217 P A43 F 218 1555 1555 1.63 LINK N A43 F 218 P1 NYM F 219 1555 1555 1.61 LINK N3' NYM F 219 P1 NYM F 220 1555 1555 1.61 LINK N3' NYM F 220 P C42 F 221 1555 1555 1.61 LINK N C42 F 221 PA G38 F 222 1555 1555 1.63 LINK N G38 F 222 P C42 F 223 1555 1555 1.62 LINK N C42 F 223 P DG F 224 1555 1555 1.62 SITE 1 AC1 2 G38 A 10 C42 B 23 SITE 1 AC2 2 CL A 250 HOH A 318 SITE 1 AC3 3 C42 A 9 NH4 A 228 G38 B 22 SITE 1 AC4 2 A43 A 6 NYM B 19 SITE 1 AC5 2 CL B 249 HOH B 317 SITE 1 AC6 3 A43 A 5 A43 B 18 NH4 B 227 SITE 1 AC7 2 A43 D 118 A43 E 205 SITE 1 AC8 2 CL E 251 HOH E 361 SITE 1 AC9 3 A43 D 117 G38 E 204 NH4 E 235 SITE 1 BC1 2 G38 D 122 C42 E 209 SITE 1 BC2 2 CL E 252 HOH E 360 SITE 1 BC3 3 C42 D 121 NYM E 208 NH4 E 234 SITE 1 BC4 2 C42 C 111 DG F 224 SITE 1 BC5 2 NYM C 107 NYM F 220 SITE 1 BC6 2 CL F 254 HOH F 362 SITE 1 BC7 3 G38 C 110 C42 F 223 NH4 F 236 SITE 1 BC8 2 CL F 253 HOH F 359 SITE 1 BC9 3 A43 C 106 NYM F 219 NH4 F 233 CRYST1 40.150 40.150 304.210 90.00 90.00 120.00 H 3 2 108 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024907 0.014380 0.000000 0.00000 SCALE2 0.000000 0.028760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003287 0.00000 HETATM 1 N1 C42 A 1 2.093 14.719 63.631 0.50 22.28 N HETATM 2 C2 C42 A 1 3.329 15.061 64.129 0.50 21.48 C HETATM 3 N3 C42 A 1 4.308 14.118 64.182 0.50 23.31 N HETATM 4 C4 C42 A 1 4.076 12.890 63.699 0.50 20.20 C HETATM 5 C5 C42 A 1 2.815 12.519 63.149 0.50 14.16 C HETATM 6 C6 C42 A 1 1.857 13.454 63.152 0.50 19.12 C HETATM 7 O2 C42 A 1 3.512 16.239 64.489 0.50 21.84 O HETATM 8 N4 C42 A 1 5.075 12.001 63.746 0.50 21.82 N HETATM 9 C1' C42 A 1 1.045 15.754 63.628 0.50 28.82 C HETATM 10 C2' C42 A 1 1.162 16.790 62.516 0.50 25.08 C HETATM 11 C3' C42 A 1 0.384 16.110 61.410 0.50 30.68 C HETATM 12 C4' C42 A 1 -0.783 15.503 62.187 0.50 29.60 C HETATM 13 O4' C42 A 1 -0.214 15.108 63.450 0.50 28.87 O HETATM 14 C5' C42 A 1 -1.434 14.300 61.540 0.50 31.12 C HETATM 15 O5' C42 A 1 -0.465 13.291 61.176 0.50 32.42 O HETATM 16 N C42 A 1 -0.094 17.061 60.434 0.50 30.88 N HETATM 17 HN1 C42 A 1 -0.122 17.963 60.890 0.00 20.00 H HETATM 18 PA G38 A 2 0.689 17.246 59.031 0.50 30.17 P HETATM 19 O2A G38 A 2 -0.180 18.142 58.200 0.50 36.16 O HETATM 20 O3P G38 A 2 1.092 15.919 58.496 0.50 35.09 O HETATM 21 O5' G38 A 2 2.038 18.011 59.396 0.50 20.29 O HETATM 22 C5' G38 A 2 2.014 19.385 59.799 0.50 14.49 C HETATM 23 C4' G38 A 2 3.416 19.872 60.095 0.50 17.25 C HETATM 24 O4' G38 A 2 3.921 19.296 61.323 0.50 16.14 O HETATM 25 C3' G38 A 2 4.510 19.581 59.064 0.50 16.55 C HETATM 26 C2' G38 A 2 5.735 19.822 59.922 0.50 16.03 C HETATM 27 C1' G38 A 2 5.329 19.096 61.201 0.50 13.78 C HETATM 28 N9 G38 A 2 5.570 17.657 61.155 0.50 12.88 N HETATM 29 C8 G38 A 2 4.663 16.667 60.858 0.50 13.17 C HETATM 30 N7 G38 A 2 5.179 15.476 60.915 0.50 15.11 N HETATM 31 C5 G38 A 2 6.503 15.692 61.272 0.50 12.78 C HETATM 32 C6 G38 A 2 7.553 14.767 61.522 0.50 10.16 C HETATM 33 O6 G38 A 2 7.507 13.542 61.523 0.50 15.74 O HETATM 34 N1 G38 A 2 8.740 15.413 61.826 0.50 10.09 N HETATM 35 C2 G38 A 2 8.895 16.778 61.919 0.50 11.35 C HETATM 36 N2 G38 A 2 10.104 17.216 62.214 0.50 16.64 N HETATM 37 N3 G38 A 2 7.926 17.646 61.734 0.50 14.67 N HETATM 38 C4 G38 A 2 6.763 17.034 61.408 0.50 13.37 C HETATM 39 N G38 A 2 4.450 20.513 57.960 0.50 13.85 N HETATM 40 HN1 G38 A 2 4.896 21.365 58.270 0.00 20.00 H HETATM 41 N1 C42 A 3 9.331 17.788 58.398 0.50 14.00 N HETATM 42 C2 C42 A 3 10.155 16.719 58.712 0.50 16.70 C HETATM 43 N3 C42 A 3 9.692 15.459 58.595 0.50 13.08 N HETATM 44 C4 C42 A 3 8.457 15.258 58.191 0.50 14.41 C HETATM 45 C5 C42 A 3 7.582 16.337 57.840 0.50 14.05 C HETATM 46 C6 C42 A 3 8.057 17.577 57.967 0.50 10.43 C HETATM 47 O2 C42 A 3 11.310 16.958 59.086 0.50 20.17 O HETATM 48 N4 C42 A 3 8.045 14.012 58.130 0.50 11.95 N HETATM 49 C1' C42 A 3 9.884 19.142 58.543 0.50 19.18 C HETATM 50 C2' C42 A 3 10.703 19.543 57.305 0.50 19.91 C HETATM 51 C3' C42 A 3 9.592 20.073 56.417 0.50 23.35 C HETATM 52 C4' C42 A 3 8.817 20.911 57.449 0.50 17.02 C HETATM 53 O4' C42 A 3 8.794 20.068 58.625 0.50 20.40 O HETATM 54 C5' C42 A 3 7.387 21.278 57.135 0.50 14.07 C HETATM 55 O5' C42 A 3 6.644 20.093 56.786 0.50 18.16 O HETATM 56 P C42 A 3 5.078 20.134 56.514 0.50 13.00 P HETATM 57 O1P C42 A 3 4.792 21.304 55.640 0.50 16.53 O HETATM 58 O2P C42 A 3 4.660 18.782 56.059 0.50 20.48 O HETATM 59 N C42 A 3 10.131 20.835 55.301 0.50 22.38 N HETATM 60 HN1 C42 A 3 11.021 21.209 55.602 0.00 20.00 H HETATM 61 PA G38 A 4 10.362 20.130 53.854 0.50 25.17 P HETATM 62 O2A G38 A 4 10.831 21.197 52.930 0.50 34.27 O HETATM 63 O3P G38 A 4 9.177 19.326 53.473 0.50 28.28 O HETATM 64 O5' G38 A 4 11.572 19.115 54.064 0.50 23.22 O HETATM 65 C5' G38 A 4 12.937 19.557 54.093 0.50 26.31 C HETATM 66 C4' G38 A 4 13.866 18.381 54.328 0.50 29.19 C HETATM 67 O4' G38 A 4 13.537 17.705 55.574 0.50 30.98 O HETATM 68 C3' G38 A 4 13.831 17.257 53.295 0.50 27.18 C HETATM 69 C2' G38 A 4 14.499 16.143 54.075 0.50 25.38 C HETATM 70 C1' G38 A 4 13.833 16.308 55.441 0.50 28.48 C HETATM 71 N9 G38 A 4 12.589 15.539 55.559 0.50 25.25 N HETATM 72 C8 G38 A 4 11.304 15.979 55.409 0.50 21.98 C HETATM 73 N7 G38 A 4 10.424 15.015 55.486 0.50 23.10 N HETATM 74 C5 G38 A 4 11.176 13.876 55.728 0.50 18.45 C HETATM 75 C6 G38 A 4 10.779 12.524 55.907 0.50 14.47 C HETATM 76 O6 G38 A 4 9.647 12.049 55.853 0.50 10.94 O HETATM 77 N1 G38 A 4 11.869 11.697 56.146 0.50 15.99 N HETATM 78 C2 G38 A 4 13.175 12.115 56.192 0.50 12.92 C HETATM 79 N2 G38 A 4 14.113 11.196 56.399 0.50 11.34 N HETATM 80 N3 G38 A 4 13.549 13.362 56.037 0.50 21.15 N HETATM 81 C4 G38 A 4 12.509 14.183 55.804 0.50 19.57 C HETATM 82 N G38 A 4 14.557 17.591 52.092 0.50 21.88 N HETATM 83 HN1 G38 A 4 15.541 17.521 52.312 0.00 20.00 H HETATM 84 P A43 A 5 14.297 16.754 50.732 0.50 17.98 P HETATM 85 O1P A43 A 5 15.011 17.446 49.641 0.50 22.57 O HETATM 86 O2P A43 A 5 12.873 16.457 50.593 0.50 15.38 O HETATM 87 O5' A43 A 5 15.000 15.343 50.939 0.50 14.11 O HETATM 88 C5' A43 A 5 16.395 15.221 51.226 0.50 8.70 C HETATM 89 C4' A43 A 5 16.733 13.775 51.507 0.50 5.73 C HETATM 90 O4' A43 A 5 16.025 13.345 52.691 0.50 17.09 O HETATM 91 C3' A43 A 5 16.284 12.744 50.473 0.50 14.16 C HETATM 92 C2' A43 A 5 16.431 11.473 51.296 0.50 11.14 C HETATM 93 C1' A43 A 5 15.833 11.923 52.631 0.50 12.49 C HETATM 94 N9 A43 A 5 14.396 11.656 52.737 0.50 12.77 N HETATM 95 C8 A43 A 5 13.390 12.568 52.538 0.50 15.09 C HETATM 96 N7 A43 A 5 12.183 12.069 52.671 0.50 10.13 N HETATM 97 C5 A43 A 5 12.403 10.743 52.985 0.50 10.62 C HETATM 98 C6 A43 A 5 11.528 9.692 53.244 0.50 13.09 C HETATM 99 N6 A43 A 5 10.196 9.826 53.262 0.50 12.29 N HETATM 100 N1 A43 A 5 12.063 8.482 53.492 0.50 14.97 N HETATM 101 C2 A43 A 5 13.388 8.348 53.493 0.50 7.49 C HETATM 102 N3 A43 A 5 14.321 9.261 53.291 0.50 10.39 N HETATM 103 C4 A43 A 5 13.762 10.464 53.029 0.50 11.43 C HETATM 104 N A43 A 5 17.105 12.760 49.278 0.50 6.63 N HETATM 105 HN1 A43 A 5 17.988 12.331 49.521 0.00 20.00 H HETATM 106 P A43 A 6 16.583 12.066 47.927 0.50 11.11 P HETATM 107 O1P A43 A 6 17.658 12.201 46.913 0.50 7.64 O HETATM 108 O2P A43 A 6 15.237 12.622 47.640 0.50 11.68 O HETATM 109 O5' A43 A 6 16.379 10.526 48.300 0.50 14.57 O HETATM 110 C5' A43 A 6 17.447 9.546 48.255 0.50 2.80 C HETATM 111 C4' A43 A 6 16.874 8.163 48.429 0.50 7.31 C HETATM 112 O4' A43 A 6 16.114 8.106 49.665 0.50 11.41 O HETATM 113 C3' A43 A 6 15.857 7.734 47.377 0.50 9.80 C HETATM 114 C2' A43 A 6 15.191 6.585 48.112 0.50 12.63 C HETATM 115 C1' A43 A 6 15.053 7.168 49.526 0.50 9.90 C HETATM 116 N9 A43 A 6 13.796 7.892 49.710 0.50 9.36 N HETATM 117 C8 A43 A 6 13.571 9.237 49.609 0.50 8.61 C HETATM 118 N7 A43 A 6 12.327 9.575 49.814 0.50 12.45 N HETATM 119 C5 A43 A 6 11.693 8.378 50.079 0.50 10.83 C HETATM 120 C6 A43 A 6 10.353 8.053 50.400 0.50 6.21 C HETATM 121 N6 A43 A 6 9.357 8.935 50.516 0.50 11.49 N HETATM 122 N1 A43 A 6 10.065 6.772 50.600 0.50 12.70 N HETATM 123 C2 A43 A 6 11.050 5.872 50.496 0.50 11.30 C HETATM 124 N3 A43 A 6 12.324 6.044 50.214 0.50 10.66 N HETATM 125 C4 A43 A 6 12.589 7.335 50.013 0.50 7.56 C HETATM 126 N A43 A 6 16.547 7.279 46.210 0.50 11.74 N HETATM 127 HN1 A43 A 6 16.779 6.307 46.366 0.00 20.00 H HETATM 128 N1 NYM A 7 11.395 5.278 46.630 0.50 14.04 N HETATM 129 C6 NYM A 7 11.897 6.494 46.264 0.50 9.41 C HETATM 130 C2 NYM A 7 10.128 5.157 47.141 0.50 12.57 C HETATM 131 O2 NYM A 7 9.631 4.086 47.423 0.50 9.16 O HETATM 132 N3 NYM A 7 9.456 6.339 47.294 0.50 15.49 N HETATM 133 C4 NYM A 7 9.893 7.584 46.961 0.50 12.88 C HETATM 134 O4 NYM A 7 9.155 8.541 47.150 0.50 14.77 O HETATM 135 C5 NYM A 7 11.217 7.637 46.395 0.50 9.80 C HETATM 136 C7 NYM A 7 11.768 8.958 45.963 0.50 9.50 C HETATM 137 O4' NYM A 7 13.583 4.437 46.507 0.50 9.95 O HETATM 138 N3' NYM A 7 13.339 3.153 43.154 0.50 23.60 N HETATM 139 C1' NYM A 7 12.211 4.050 46.491 0.50 12.85 C HETATM 140 C2' NYM A 7 11.986 3.305 45.166 0.50 10.95 C HETATM 141 C3' NYM A 7 13.068 3.931 44.318 0.50 16.92 C HETATM 142 C4' NYM A 7 14.217 3.934 45.316 0.50 11.13 C HETATM 143 O5' NYM A 7 14.941 6.107 44.589 0.50 7.95 O HETATM 144 C5' NYM A 7 15.395 4.801 44.943 0.50 6.96 C HETATM 145 P1 NYM A 7 15.871 7.386 44.739 0.50 12.73 P HETATM 146 OP2 NYM A 7 15.020 8.595 44.544 0.50 21.53 O HETATM 147 OP1 NYM A 7 16.981 7.111 43.808 0.50 8.66 O HETATM 148 H3'2 NYM A 7 12.985 2.221 43.327 0.00 20.00 H HETATM 149 N1 NYM A 8 7.967 3.728 43.783 0.50 12.99 N HETATM 150 C6 NYM A 8 9.004 4.553 43.408 0.50 12.28 C HETATM 151 C2 NYM A 8 6.841 4.225 44.376 0.50 10.72 C HETATM 152 O2 NYM A 8 5.914 3.522 44.691 0.50 7.81 O HETATM 153 N3 NYM A 8 6.846 5.586 44.568 0.50 10.39 N HETATM 154 C4 NYM A 8 7.835 6.473 44.202 0.50 15.55 C HETATM 155 O4 NYM A 8 7.681 7.678 44.409 0.50 19.95 O HETATM 156 C5 NYM A 8 8.994 5.877 43.570 0.50 8.87 C HETATM 157 C7 NYM A 8 10.118 6.750 43.118 0.50 7.49 C HETATM 158 O4' NYM A 8 9.455 1.957 43.398 0.50 18.67 O HETATM 159 N3' NYM A 8 8.311 1.166 40.020 0.50 13.09 N HETATM 160 C1' NYM A 8 8.062 2.277 43.539 0.50 19.91 C HETATM 161 C2' NYM A 8 7.366 1.799 42.232 0.50 16.69 C HETATM 162 C3' NYM A 8 8.519 1.917 41.248 0.50 17.59 C HETATM 163 C4' NYM A 8 9.654 1.339 42.105 0.50 20.47 C HETATM 164 O5' NYM A 8 11.302 3.039 41.632 0.50 22.48 O HETATM 165 C5' NYM A 8 11.075 1.628 41.669 0.50 18.77 C HETATM 166 P1 NYM A 8 12.772 3.635 41.726 0.50 26.24 P HETATM 167 OP2 NYM A 8 12.665 5.135 41.720 0.50 28.84 O HETATM 168 OP1 NYM A 8 13.626 2.935 40.724 0.50 26.21 O HETATM 169 H3'2 NYM A 8 7.827 0.316 40.278 0.00 20.00 H HETATM 170 N1 C42 A 9 3.626 4.574 40.999 0.50 15.23 N HETATM 171 C2 C42 A 9 2.995 5.730 41.505 0.50 12.17 C HETATM 172 N3 C42 A 9 3.742 6.813 41.788 0.50 12.60 N HETATM 173 C4 C42 A 9 5.053 6.785 41.557 0.50 12.85 C HETATM 174 C5 C42 A 9 5.702 5.657 40.975 0.50 16.63 C HETATM 175 C6 C42 A 9 4.957 4.583 40.714 0.50 12.41 C HETATM 176 O2 C42 A 9 1.765 5.729 41.677 0.50 22.09 O HETATM 177 N4 C42 A 9 5.761 7.854 41.893 0.50 10.21 N HETATM 178 C1' C42 A 9 2.840 3.334 40.828 0.50 14.70 C HETATM 179 C2' C42 A 9 2.147 3.148 39.484 0.50 15.95 C HETATM 180 C3' C42 A 9 3.207 2.391 38.701 0.50 16.67 C HETATM 181 C4' C42 A 9 3.735 1.436 39.760 0.50 10.56 C HETATM 182 O4' C42 A 9 3.741 2.235 40.964 0.50 14.59 O HETATM 183 C5' C42 A 9 5.132 0.910 39.511 0.50 13.99 C HETATM 184 O5' C42 A 9 6.015 2.009 39.287 0.50 16.04 O HETATM 185 P C42 A 9 7.500 1.814 38.754 0.50 16.12 P HETATM 186 O1P C42 A 9 7.415 0.732 37.741 0.50 18.32 O HETATM 187 O2P C42 A 9 8.029 3.127 38.351 0.50 15.81 O HETATM 188 N C42 A 9 2.626 1.665 37.605 0.50 15.63 N HETATM 189 HN1 C42 A 9 1.704 1.381 37.902 0.00 20.00 H HETATM 190 PA G38 A 10 2.475 2.358 36.173 0.50 12.94 P HETATM 191 O2A G38 A 10 1.881 1.323 35.319 0.50 11.58 O HETATM 192 O3P G38 A 10 3.786 2.958 35.815 0.50 16.01 O HETATM 193 O5' G38 A 10 1.418 3.537 36.376 0.50 12.13 O HETATM 194 C5' G38 A 10 0.014 3.280 36.431 0.50 8.72 C HETATM 195 C4' G38 A 10 -0.721 4.561 36.711 0.50 12.04 C HETATM 196 O4' G38 A 10 -0.273 5.122 37.962 0.50 14.97 O HETATM 197 C3' G38 A 10 -0.401 5.663 35.722 0.50 11.87 C HETATM 198 C2' G38 A 10 -0.933 6.861 36.476 0.50 10.15 C HETATM 199 C1' G38 A 10 -0.477 6.536 37.915 0.50 13.69 C HETATM 200 N9 G38 A 10 0.798 7.190 38.162 0.50 12.94 N HETATM 201 C8 G38 A 10 2.046 6.658 38.022 0.50 7.20 C HETATM 202 N7 G38 A 10 2.987 7.513 38.256 0.50 9.85 N HETATM 203 C5 G38 A 10 2.320 8.676 38.586 0.50 8.59 C HETATM 204 C6 G38 A 10 2.813 9.948 38.953 0.50 7.14 C HETATM 205 O6 G38 A 10 3.978 10.312 39.084 0.50 19.88 O HETATM 206 N1 G38 A 10 1.803 10.838 39.190 0.50 5.17 N HETATM 207 C2 G38 A 10 0.480 10.564 39.096 0.50 4.23 C HETATM 208 N2 G38 A 10 -0.351 11.593 39.381 0.50 9.65 N HETATM 209 N3 G38 A 10 -0.009 9.383 38.762 0.50 7.39 N HETATM 210 C4 G38 A 10 0.968 8.491 38.530 0.50 8.76 C HETATM 211 N G38 A 10 -1.103 5.457 34.502 0.50 16.20 N HETATM 212 HN1 G38 A 10 -2.076 5.670 34.680 0.00 20.00 H HETATM 213 N1 C42 A 11 0.307 10.915 35.390 0.50 18.71 N HETATM 214 C2 C42 A 11 1.117 11.930 35.876 0.50 12.94 C HETATM 215 N3 C42 A 11 2.438 11.698 36.059 0.50 5.18 N HETATM 216 C4 C42 A 11 2.940 10.512 35.719 0.50 3.92 C HETATM 217 C5 C42 A 11 2.139 9.485 35.137 0.50 11.91 C HETATM 218 C6 C42 A 11 0.838 9.724 34.998 0.50 11.49 C HETATM 219 O2 C42 A 11 0.600 13.022 36.098 0.50 19.25 O HETATM 220 N4 C42 A 11 4.207 10.300 35.937 0.50 4.27 N HETATM 221 C1' C42 A 11 -1.138 11.133 35.344 0.50 21.67 C HETATM 222 C2' C42 A 11 -1.586 11.883 34.091 0.50 28.70 C HETATM 223 C3' C42 A 11 -1.660 10.713 33.128 0.50 29.11 C HETATM 224 C4' C42 A 11 -2.384 9.696 33.996 0.50 27.29 C HETATM 225 O4' C42 A 11 -1.753 9.840 35.285 0.50 23.72 O HETATM 226 C5' C42 A 11 -2.338 8.255 33.537 0.50 21.17 C HETATM 227 O5' C42 A 11 -0.990 7.789 33.512 0.50 22.78 O HETATM 228 P C42 A 11 -0.661 6.260 33.174 0.50 23.88 P HETATM 229 O1P C42 A 11 -1.586 5.792 32.120 0.50 22.82 O HETATM 230 O2P C42 A 11 0.817 6.118 32.977 0.50 21.88 O HETATM 231 N C42 A 11 -2.424 11.018 31.954 0.50 31.68 N HETATM 232 HN1 C42 A 11 -3.036 11.787 32.189 0.00 20.00 H