HEADER GENE REGULATION 27-MAY-26 36AC TITLE TERNARY COMPLEX BETWEEN CHD4-C1BC2AB, GATAD2ACR2, AND CDK2AP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT KINASE 2-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: C; COMPND 4 SYNONYM: CDK2-ASSOCIATED PROTEIN 1,DELETED IN ORAL CANCER 1,DOC-1, COMPND 5 PUTATIVE ORAL CANCER SUPPRESSOR; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 4; COMPND 9 CHAIN: A; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: CHD4 C1B AND C2AB DOMAINS FUSED BY SHORT LINKER COMPND 12 (GGGS),CHD4 C1B AND C2AB DOMAINS FUSED BY SHORT LINKER (GGGS); COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TRANSCRIPTIONAL REPRESSOR P66-ALPHA; COMPND 15 CHAIN: B; COMPND 16 SYNONYM: HP66ALPHA,GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 2A; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: GATAD2A CR2 DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDK2AP1, CDKAP1, DOC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 GENE: GATAD2A; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CHROMATIN REMODELING COMPLEX, DNA BINDING, NURD, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR D.C.WILLIAMS,T.LI,R.K.MCGINTY REVDAT 1 28-OCT-26 36AC 0 JRNL AUTH D.C.J.WILLIAMS,J.REN,T.LI,J.M.PELTON,D.DEDAKIA,B.NOVY, JRNL AUTH 2 K.I.POPOV,R.K.MCGINTY,G.D.GINDER,A.A.BOWERS JRNL TITL MACROCYCLE SCREENING AGAINST THE C-TERMINAL REGION OF CHD4 JRNL TITL 2 UNCOVERS ITS ROLE AS AN INTERACTION HUB IN THE FORMATION OF JRNL TITL 3 THE NUCLEOSOME REMODELING AND DEACETYLASE COMPLEX JRNL REF J.AM.CHEM.SOC. 2026 JRNL REFN ESSN 1520-5126 JRNL DOI 10.1021/JACS.6C11754 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2.0_5885 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 36126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.540 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.0300 - 4.8300 0.90 2323 136 0.1955 0.2456 REMARK 3 2 4.8300 - 3.8300 0.87 2268 133 0.1772 0.2079 REMARK 3 3 3.8300 - 3.3500 0.95 2433 142 0.1837 0.2553 REMARK 3 4 3.3500 - 3.0400 0.96 2491 147 0.1975 0.2402 REMARK 3 5 3.0400 - 2.8300 0.95 2464 144 0.2172 0.2858 REMARK 3 6 2.8200 - 2.6600 0.96 2490 146 0.2030 0.2472 REMARK 3 7 2.6600 - 2.5300 0.97 2458 143 0.2035 0.2485 REMARK 3 8 2.5300 - 2.4200 0.97 2489 147 0.2053 0.2647 REMARK 3 9 2.4200 - 2.3200 0.96 2501 146 0.2095 0.2470 REMARK 3 10 2.3200 - 2.2400 0.97 2536 149 0.2143 0.2594 REMARK 3 11 2.2400 - 2.1700 0.96 2441 142 0.2156 0.2353 REMARK 3 12 2.1700 - 2.1100 0.95 2466 146 0.2088 0.2576 REMARK 3 13 2.1100 - 2.0500 0.94 2443 142 0.2334 0.2599 REMARK 3 14 2.0500 - 2.0000 0.90 2323 137 0.2430 0.2638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.217 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3996 REMARK 3 ANGLE : 0.810 5417 REMARK 3 CHIRALITY : 0.046 608 REMARK 3 PLANARITY : 0.009 705 REMARK 3 DIHEDRAL : 19.018 1432 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -1.1892 1.2178 -1.1518 REMARK 3 T TENSOR REMARK 3 T11: 0.2124 T22: 0.2339 REMARK 3 T33: 0.2648 T12: 0.0044 REMARK 3 T13: 0.0137 T23: -0.0346 REMARK 3 L TENSOR REMARK 3 L11: 0.5697 L22: 1.6166 REMARK 3 L33: 1.8518 L12: 0.0309 REMARK 3 L13: 0.1597 L23: -0.9271 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: -0.0012 S13: 0.0175 REMARK 3 S21: 0.1349 S22: 0.0300 S23: -0.0638 REMARK 3 S31: 0.0757 S32: 0.0302 S33: -0.0539 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 36AC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAY-26. REMARK 100 THE DEPOSITION ID IS D_1000308369. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36223 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE, PH 7.0, AND 20% REMARK 280 (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C 27 REMARK 465 SER C 28 REMARK 465 MET C 29 REMARK 465 ALA C 30 REMARK 465 THR C 31 REMARK 465 SER C 32 REMARK 465 SER C 33 REMARK 465 LEU C 47 REMARK 465 GLY C 48 REMARK 465 TYR C 49 REMARK 465 THR C 50 REMARK 465 GLN C 51 REMARK 465 GLY C 52 REMARK 465 THR C 53 REMARK 465 GLY C 54 REMARK 465 ASN C 55 REMARK 465 SER C 56 REMARK 465 GLN C 57 REMARK 465 VAL C 58 REMARK 465 PRO C 59 REMARK 465 ALA C 113 REMARK 465 ARG C 114 REMARK 465 SER C 115 REMARK 465 MET A 1394 REMARK 465 ASP A 1395 REMARK 465 LYS A 1396 REMARK 465 ASP A 1397 REMARK 465 LYS A 1398 REMARK 465 ASP A 1437 REMARK 465 ALA A 1438 REMARK 465 PHE A 1439 REMARK 465 ASN A 1898 REMARK 465 ARG A 1899 REMARK 465 ALA A 1900 REMARK 465 PRO A 1901 REMARK 465 GLU A 1902 REMARK 465 GLY B 333 REMARK 465 SER B 334 REMARK 465 VAL B 335 REMARK 465 THR B 336 REMARK 465 SER B 337 REMARK 465 ALA B 338 REMARK 465 GLU B 339 REMARK 465 SER B 340 REMARK 465 PRO B 341 REMARK 465 ALA B 342 REMARK 465 SER B 405 REMARK 465 ALA B 406 REMARK 465 ALA B 407 REMARK 465 THR B 408 REMARK 465 GLN B 478 REMARK 465 GLN B 479 REMARK 465 GLY B 480 REMARK 465 THR B 481 REMARK 465 ALA B 482 REMARK 465 PRO B 483 REMARK 465 ALA B 484 REMARK 465 GLN B 485 REMARK 465 ALA B 486 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN C 34 CB CG CD OE1 NE2 REMARK 470 ARG C 36 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 39 CD1 CD2 REMARK 470 GLN C 60 OE1 NE2 REMARK 470 LYS C 62 CG CD CE NZ REMARK 470 GLU C 65 OE1 OE2 REMARK 470 GLU C 71 CG CD OE1 OE2 REMARK 470 GLU C 72 CG CD OE1 OE2 REMARK 470 LYS C 85 CD CE NZ REMARK 470 GLU C 108 CG CD OE1 OE2 REMARK 470 GLU C 110 CD OE1 OE2 REMARK 470 ARG C 111 CG CD NE CZ NH1 NH2 REMARK 470 LEU A1400 CG CD1 CD2 REMARK 470 LEU A1404 CD1 CD2 REMARK 470 ILE A1411 CD1 REMARK 470 LYS A1422 CE NZ REMARK 470 GLN A1436 CG CD OE1 NE2 REMARK 470 THR A1440 OG1 CG2 REMARK 470 VAL A1445 CG1 CG2 REMARK 470 ARG A1446 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1453 CD OE1 OE2 REMARK 470 LYS A1454 CG CD CE NZ REMARK 470 LYS A1457 CD CE NZ REMARK 470 GLU A1469 OE2 REMARK 470 GLU A1476 CG CD OE1 OE2 REMARK 470 GLN A1490 CG CD OE1 NE2 REMARK 470 LYS A1504 CD CE NZ REMARK 470 GLN A1507 CG CD OE1 NE2 REMARK 470 ARG A1515 NE CZ NH1 NH2 REMARK 470 MET A1518 CE REMARK 470 LYS A1693 CG CD CE NZ REMARK 470 ARG A1695 CG CD NE CZ NH1 NH2 REMARK 470 VAL A1721 CG1 CG2 REMARK 470 LYS A1723 CE NZ REMARK 470 LYS A1724 CG CD CE NZ REMARK 470 GLN A1750 CG CD OE1 NE2 REMARK 470 GLU A1776 CG CD OE1 OE2 REMARK 470 MET A1807 CG SD CE REMARK 470 GLU A1809 OE1 OE2 REMARK 470 MET A1816 CE REMARK 470 GLU A1830 CD OE1 OE2 REMARK 470 LYS A1837 CD CE NZ REMARK 470 LYS A1844 CE NZ REMARK 470 LEU A1850 CD1 CD2 REMARK 470 LYS A1852 CG CD CE NZ REMARK 470 LYS A1855 CE NZ REMARK 470 GLU A1858 CG CD OE1 OE2 REMARK 470 GLU A1859 CD OE1 OE2 REMARK 470 GLU A1889 CG CD OE1 OE2 REMARK 470 ARG A1890 CG CD NE CZ NH1 NH2 REMARK 470 ASN A1891 OD1 ND2 REMARK 470 ARG A1895 CG CD NE CZ NH1 NH2 REMARK 470 SER B 343 OG REMARK 470 ARG B 344 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 345 CG CD OE1 NE2 REMARK 470 LYS B 349 CG CD CE NZ REMARK 470 LEU B 350 CD1 CD2 REMARK 470 LYS B 358 CD CE NZ REMARK 470 GLU B 362 CD OE1 OE2 REMARK 470 LYS B 367 CG CD CE NZ REMARK 470 GLU B 372 CG CD OE1 OE2 REMARK 470 MET B 404 CG SD CE REMARK 470 VAL B 409 CG1 CG2 REMARK 470 LEU B 410 CG CD1 CD2 REMARK 470 ARG B 412 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 413 CG CD OE1 OE2 REMARK 470 ARG B 427 CZ NH1 NH2 REMARK 470 ARG B 429 NE CZ NH1 NH2 REMARK 470 GLU B 430 CG CD OE1 OE2 REMARK 470 LYS B 432 CG CD CE NZ REMARK 470 LYS B 447 CD CE NZ REMARK 470 LYS B 448 CD CE NZ REMARK 470 GLU B 453 CD OE1 OE2 REMARK 470 ARG B 457 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 459 CG CD CE NZ REMARK 470 VAL B 463 CG1 CG2 REMARK 470 LYS B 464 CG CD CE NZ REMARK 470 GLN B 467 CG CD OE1 NE2 REMARK 470 GLN B 468 CD OE1 NE2 REMARK 470 GLU B 469 OE1 OE2 REMARK 470 GLU B 471 CG CD OE1 OE2 REMARK 470 ILE B 472 CG2 CD1 REMARK 470 GLU B 473 CG CD OE1 OE2 REMARK 470 GLN B 474 CG CD OE1 NE2 REMARK 470 ARG B 475 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 476 CG CD1 CD2 REMARK 470 LEU B 477 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR C 35 -48.35 64.60 REMARK 500 TYR C 63 -51.86 71.21 REMARK 500 THR A1441 -73.17 -149.56 REMARK 500 ALA A1479 1.41 -67.28 REMARK 500 PHE A1698 134.01 -171.89 REMARK 500 HIS A1730 -157.92 -147.29 REMARK 500 PRO B 369 -178.72 -63.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2169 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH A2170 DISTANCE = 6.94 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 417 SG REMARK 620 2 CYS B 420 SG 111.7 REMARK 620 3 CYS B 438 SG 111.6 113.6 REMARK 620 4 CYS B 441 SG 110.5 103.3 105.6 REMARK 620 N 1 2 3 DBREF 36AC C 28 115 UNP O14519 CDKA1_HUMAN 28 115 DBREF 36AC A 1395 1519 UNP B3KY63 B3KY63_HUMAN 1369 1493 DBREF 36AC A 1693 1902 UNP B3KY63 B3KY63_HUMAN 1667 1876 DBREF 36AC B 335 486 UNP Q86YP4 P66A_HUMAN 335 486 SEQADV 36AC GLY C 27 UNP O14519 EXPRESSION TAG SEQADV 36AC MET A 1394 UNP B3KY63 INITIATING METHIONINE SEQADV 36AC GLY A 1520 UNP B3KY63 LINKER SEQADV 36AC GLY A 1521 UNP B3KY63 LINKER SEQADV 36AC GLY A 1522 UNP B3KY63 LINKER SEQADV 36AC SER A 1523 UNP B3KY63 LINKER SEQADV 36AC GLY B 333 UNP Q86YP4 EXPRESSION TAG SEQADV 36AC SER B 334 UNP Q86YP4 EXPRESSION TAG SEQRES 1 C 89 GLY SER MET ALA THR SER SER GLN TYR ARG GLN LEU LEU SEQRES 2 C 89 SER ASP TYR GLY PRO PRO SER LEU GLY TYR THR GLN GLY SEQRES 3 C 89 THR GLY ASN SER GLN VAL PRO GLN SER LYS TYR ALA GLU SEQRES 4 C 89 LEU LEU ALA ILE ILE GLU GLU LEU GLY LYS GLU ILE ARG SEQRES 5 C 89 PRO THR TYR ALA GLY SER LYS SER ALA MET GLU ARG LEU SEQRES 6 C 89 LYS ARG GLY ILE ILE HIS ALA ARG GLY LEU VAL ARG GLU SEQRES 7 C 89 CYS LEU ALA GLU THR GLU ARG ASN ALA ARG SER SEQRES 1 A 340 MET ASP LYS ASP LYS PRO LEU PRO PRO LEU LEU ALA ARG SEQRES 2 A 340 VAL GLY GLY ASN ILE GLU VAL LEU GLY PHE ASN ALA ARG SEQRES 3 A 340 GLN ARG LYS ALA PHE LEU ASN ALA ILE MET ARG TYR GLY SEQRES 4 A 340 MET PRO PRO GLN ASP ALA PHE THR THR GLN TRP LEU VAL SEQRES 5 A 340 ARG ASP LEU ARG GLY LYS SER GLU LYS GLU PHE LYS ALA SEQRES 6 A 340 TYR VAL SER LEU PHE MET ARG HIS LEU CYS GLU PRO GLY SEQRES 7 A 340 ALA ASP GLY ALA GLU THR PHE ALA ASP GLY VAL PRO ARG SEQRES 8 A 340 GLU GLY LEU SER ARG GLN HIS VAL LEU THR ARG ILE GLY SEQRES 9 A 340 VAL MET SER LEU ILE ARG LYS LYS VAL GLN GLU PHE GLU SEQRES 10 A 340 HIS VAL ASN GLY ARG TRP SER MET PRO GLY GLY GLY SER SEQRES 11 A 340 LYS GLN ARG PHE MET PHE ASN ILE ALA ASP GLY GLY PHE SEQRES 12 A 340 THR GLU LEU HIS SER LEU TRP GLN ASN GLU GLU ARG ALA SEQRES 13 A 340 ALA THR VAL THR LYS LYS THR TYR GLU ILE TRP HIS ARG SEQRES 14 A 340 ARG HIS ASP TYR TRP LEU LEU ALA GLY ILE ILE ASN HIS SEQRES 15 A 340 GLY TYR ALA ARG TRP GLN ASP ILE GLN ASN ASP PRO ARG SEQRES 16 A 340 TYR ALA ILE LEU ASN GLU PRO PHE LYS GLY GLU MET ASN SEQRES 17 A 340 ARG GLY ASN PHE LEU GLU ILE LYS ASN LYS PHE LEU ALA SEQRES 18 A 340 ARG ARG PHE LYS LEU LEU GLU GLN ALA LEU VAL ILE GLU SEQRES 19 A 340 GLU GLN LEU ARG ARG ALA ALA TYR LEU ASN MET SER GLU SEQRES 20 A 340 ASP PRO SER HIS PRO SER MET ALA LEU ASN THR ARG PHE SEQRES 21 A 340 ALA GLU VAL GLU CYS LEU ALA GLU SER HIS GLN HIS LEU SEQRES 22 A 340 SER LYS GLU SER MET ALA GLY ASN LYS PRO ALA ASN ALA SEQRES 23 A 340 VAL LEU HIS LYS VAL LEU LYS GLN LEU GLU GLU LEU LEU SEQRES 24 A 340 SER ASP MET LYS ALA ASP VAL THR ARG LEU PRO ALA THR SEQRES 25 A 340 ILE ALA ARG ILE PRO PRO VAL ALA VAL ARG LEU GLN MET SEQRES 26 A 340 SER GLU ARG ASN ILE LEU SER ARG LEU ALA ASN ARG ALA SEQRES 27 A 340 PRO GLU SEQRES 1 B 154 GLY SER VAL THR SER ALA GLU SER PRO ALA SER ARG GLN SEQRES 2 B 154 ALA ALA ALA LYS LEU ALA LEU ARG LYS GLN LEU GLU LYS SEQRES 3 B 154 THR LEU LEU GLU ILE PRO PRO PRO LYS PRO PRO ALA PRO SEQRES 4 B 154 GLU MET ASN PHE LEU PRO SER ALA ALA ASN ASN GLU PHE SEQRES 5 B 154 ILE TYR LEU VAL GLY LEU GLU GLU VAL VAL GLN ASN LEU SEQRES 6 B 154 LEU GLU THR GLN GLY ARG MET SER ALA ALA THR VAL LEU SEQRES 7 B 154 SER ARG GLU PRO TYR MET CYS ALA GLN CYS LYS THR ASP SEQRES 8 B 154 PHE THR CYS ARG TRP ARG GLU GLU LYS SER GLY ALA ILE SEQRES 9 B 154 MET CYS GLU ASN CYS MET THR THR ASN GLN LYS LYS ALA SEQRES 10 B 154 LEU LYS VAL GLU HIS THR SER ARG LEU LYS ALA ALA PHE SEQRES 11 B 154 VAL LYS ALA LEU GLN GLN GLU GLN GLU ILE GLU GLN ARG SEQRES 12 B 154 LEU LEU GLN GLN GLY THR ALA PRO ALA GLN ALA HET ZN B 501 1 HETNAM ZN ZINC ION FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *239(H2 O) HELIX 1 AA1 TYR C 35 GLN C 37 5 3 HELIX 2 AA2 LEU C 38 GLY C 43 1 6 HELIX 3 AA3 TYR C 63 LYS C 75 1 13 HELIX 4 AA4 GLU C 76 ALA C 82 1 7 HELIX 5 AA5 SER C 84 ASN C 112 1 29 HELIX 6 AA6 ASN A 1417 GLY A 1432 1 16 HELIX 7 AA7 VAL A 1445 ARG A 1449 5 5 HELIX 8 AA8 SER A 1452 CYS A 1468 1 17 HELIX 9 AA9 SER A 1488 GLY A 1514 1 27 HELIX 10 AB1 GLU A 1707 THR A 1722 1 16 HELIX 11 AB2 HIS A 1730 GLY A 1745 1 16 HELIX 12 AB3 ARG A 1748 ASN A 1754 1 7 HELIX 13 AB4 ASP A 1755 LYS A 1766 5 12 HELIX 14 AB5 ARG A 1771 LEU A 1805 1 35 HELIX 15 AB6 HIS A 1813 SER A 1815 5 3 HELIX 16 AB7 MET A 1816 HIS A 1832 1 17 HELIX 17 AB8 HIS A 1832 ALA A 1841 1 10 HELIX 18 AB9 ASN A 1843 ARG A 1877 1 35 HELIX 19 AC1 PRO A 1880 LEU A 1885 1 6 HELIX 20 AC2 SER A 1888 ARG A 1895 1 8 HELIX 21 AC3 ARG B 344 GLU B 362 1 19 HELIX 22 AC4 ASN B 382 GLN B 401 1 20 HELIX 23 AC5 GLU B 439 LEU B 477 1 39 SHEET 1 AA1 2 LEU A1404 VAL A1407 0 SHEET 2 AA1 2 ASN A1410 VAL A1413 -1 O GLU A1412 N ALA A1405 SHEET 1 AA2 2 TRP B 428 GLU B 430 0 SHEET 2 AA2 2 ILE B 436 CYS B 438 -1 O MET B 437 N ARG B 429 LINK SG CYS B 417 ZN ZN B 501 1555 1555 2.32 LINK SG CYS B 420 ZN ZN B 501 1555 1555 2.34 LINK SG CYS B 438 ZN ZN B 501 1555 1555 2.32 LINK SG CYS B 441 ZN ZN B 501 1555 1555 2.35 CRYST1 43.732 52.858 72.473 98.75 103.40 110.69 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022867 0.008638 0.007936 0.00000 SCALE2 0.000000 0.020223 0.005383 0.00000 SCALE3 0.000000 0.000000 0.014678 0.00000 CONECT 3505 3917 CONECT 3525 3917 CONECT 3658 3917 CONECT 3681 3917 CONECT 3917 3505 3525 3658 3681 MASTER 418 0 1 23 4 0 0 6 4153 3 5 46 END