HEADER VIRUS 01-JUN-26 36CQ TITLE STRUCTURE OF THE PHIX174 BACTERIOPHAGE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN J; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: J PROTEIN,SMALL CORE PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN F; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: F PROTEIN,GPF; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: MAJOR SPIKE PROTEIN G; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: G PROTEIN,GPG; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SINSHEIMERVIRUS; SOURCE 3 ORGANISM_TAXID: 1910954; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI C; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 498388; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SINSHEIMERVIRUS; SOURCE 8 ORGANISM_TAXID: 1910954; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI C; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 498388; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: SINSHEIMERVIRUS; SOURCE 13 ORGANISM_TAXID: 1910954; SOURCE 14 GENE: F652_4308; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI C; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 498388 KEYWDS PHAGE, MICROVIRIDAE, ICOSAHEDRAL, BACTERIOPHAGE, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR D.B.LI,S.H.KING,C.L.DRISCOLL,M.E.WILKINSON,B.L.HIE REVDAT 1 17-JUN-26 36CQ 0 JRNL AUTH S.H.KING,C.L.DRISCOLL,D.B.LI,D.GUO,A.T.MERCHANT,G.BRIXI, JRNL AUTH 2 M.E.WILKINSON,B.L.HIE JRNL TITL GENERATIVE DESIGN OF NOVEL BACTERIOPHAGES WITH GENOME JRNL TITL 2 LANGUAGE MODELS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, COOT, ISOLDE, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, RELION, REMARK 3 PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.760 REMARK 3 NUMBER OF PARTICLES : 24547 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 36CQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-26. REMARK 100 THE DEPOSITION ID IS D_1000308464. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SINSHEIMERVIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : PURIFIED FROM E. COLI CULTURE REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : TFS FALCON 4I (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4115.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 150000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 180-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 180-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.809017 -0.500000 0.309017 472.86121 REMARK 350 BIOMT2 2 -0.500000 0.309017 -0.809017 471.82926 REMARK 350 BIOMT3 2 0.309017 -0.809017 -0.500000 471.19148 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 471.65298 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 471.65298 REMARK 350 BIOMT1 4 0.809017 -0.500000 -0.309017 236.00277 REMARK 350 BIOMT2 4 -0.500000 -0.309017 -0.809017 617.86327 REMARK 350 BIOMT3 4 0.309017 0.809017 -0.500000 88.86948 REMARK 350 BIOMT1 5 0.500000 0.309017 -0.809017 235.54127 REMARK 350 BIOMT2 5 -0.309017 -0.809017 -0.500000 618.14850 REMARK 350 BIOMT3 5 -0.809017 0.500000 -0.309017 381.11378 REMARK 350 BIOMT1 6 -0.309017 -0.809017 -0.500000 618.14850 REMARK 350 BIOMT2 6 -0.809017 0.500000 -0.309017 382.03678 REMARK 350 BIOMT3 6 0.500000 0.309017 -0.809017 234.61826 REMARK 350 BIOMT1 7 -0.809017 0.500000 -0.309017 382.03678 REMARK 350 BIOMT2 7 0.500000 0.309017 -0.809017 235.54127 REMARK 350 BIOMT3 7 -0.309017 -0.809017 -0.500000 617.22549 REMARK 350 BIOMT1 8 -0.809017 -0.500000 -0.309017 618.32478 REMARK 350 BIOMT2 8 0.500000 -0.309017 -0.809017 381.57528 REMARK 350 BIOMT3 8 0.309017 -0.809017 0.500000 235.82649 REMARK 350 BIOMT1 9 -0.309017 0.809017 -0.500000 235.82649 REMARK 350 BIOMT2 9 -0.809017 -0.500000 -0.309017 618.32478 REMARK 350 BIOMT3 9 -0.500000 0.309017 0.809017 90.07770 REMARK 350 BIOMT1 10 0.500000 -0.309017 -0.809017 381.57528 REMARK 350 BIOMT2 10 -0.309017 0.809017 -0.500000 235.82649 REMARK 350 BIOMT3 10 0.809017 0.500000 0.309017 -146.67179 REMARK 350 BIOMT1 11 0.000000 0.000000 -1.000000 471.65298 REMARK 350 BIOMT2 11 -1.000000 0.000000 0.000000 472.57599 REMARK 350 BIOMT3 11 0.000000 1.000000 0.000000 -0.92300 REMARK 350 BIOMT1 12 -0.500000 -0.309017 -0.809017 617.86327 REMARK 350 BIOMT2 12 0.309017 0.809017 -0.500000 89.79248 REMARK 350 BIOMT3 12 0.809017 -0.500000 -0.309017 235.07977 REMARK 350 BIOMT1 13 -0.500000 0.309017 -0.809017 471.82926 REMARK 350 BIOMT2 13 0.309017 -0.809017 -0.500000 472.11449 REMARK 350 BIOMT3 13 -0.809017 -0.500000 0.309017 471.93821 REMARK 350 BIOMT1 14 -0.309017 -0.809017 -0.500000 618.14850 REMARK 350 BIOMT2 14 0.809017 -0.500000 0.309017 90.53921 REMARK 350 BIOMT3 14 -0.500000 -0.309017 0.809017 236.11172 REMARK 350 BIOMT1 15 -0.809017 0.500000 -0.309017 382.03678 REMARK 350 BIOMT2 15 -0.500000 -0.309017 0.809017 237.03472 REMARK 350 BIOMT3 15 0.309017 0.809017 0.500000 -146.49551 REMARK 350 BIOMT1 16 0.500000 0.309017 -0.809017 235.54127 REMARK 350 BIOMT2 16 0.309017 0.809017 0.500000 -145.57251 REMARK 350 BIOMT3 16 0.809017 -0.500000 0.309017 89.61620 REMARK 350 BIOMT1 17 -0.500000 0.309017 -0.809017 471.82926 REMARK 350 BIOMT2 17 -0.309017 0.809017 0.500000 0.46150 REMARK 350 BIOMT3 17 0.809017 0.500000 -0.309017 -1.20823 REMARK 350 BIOMT1 18 0.000000 0.000000 -1.000000 471.65298 REMARK 350 BIOMT2 18 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 -1.000000 0.000000 471.65298 REMARK 350 BIOMT1 19 -0.500000 -0.309017 -0.809017 617.86327 REMARK 350 BIOMT2 19 -0.309017 -0.809017 0.500000 382.78351 REMARK 350 BIOMT3 19 -0.809017 0.500000 0.309017 235.65021 REMARK 350 BIOMT1 20 0.000000 -1.000000 0.000000 472.57599 REMARK 350 BIOMT2 20 0.000000 0.000000 1.000000 0.92300 REMARK 350 BIOMT3 20 -1.000000 0.000000 0.000000 471.65298 REMARK 350 BIOMT1 21 -0.809017 0.500000 0.309017 236.57322 REMARK 350 BIOMT2 21 0.500000 0.309017 0.809017 -145.28729 REMARK 350 BIOMT3 21 0.309017 0.809017 -0.500000 88.86948 REMARK 350 BIOMT1 22 0.809017 0.500000 -0.309017 -0.28522 REMARK 350 BIOMT2 22 0.500000 -0.309017 0.809017 0.74673 REMARK 350 BIOMT3 22 0.309017 -0.809017 -0.500000 471.19148 REMARK 350 BIOMT1 23 -0.309017 0.809017 -0.500000 235.82649 REMARK 350 BIOMT2 23 0.809017 0.500000 0.309017 -145.74879 REMARK 350 BIOMT3 23 0.500000 -0.309017 -0.809017 380.65228 REMARK 350 BIOMT1 24 0.500000 -0.309017 -0.809017 381.57528 REMARK 350 BIOMT2 24 0.309017 -0.809017 0.500000 236.74950 REMARK 350 BIOMT3 24 -0.809017 -0.500000 -0.309017 617.40177 REMARK 350 BIOMT1 25 -0.809017 -0.500000 -0.309017 618.32478 REMARK 350 BIOMT2 25 -0.500000 0.309017 0.809017 91.00071 REMARK 350 BIOMT3 25 -0.309017 0.809017 -0.500000 234.90349 REMARK 350 BIOMT1 26 -0.309017 -0.809017 0.500000 382.78351 REMARK 350 BIOMT2 26 -0.809017 0.500000 0.309017 236.57322 REMARK 350 BIOMT3 26 -0.500000 -0.309017 -0.809017 616.94027 REMARK 350 BIOMT1 27 -0.309017 0.809017 0.500000 0.46150 REMARK 350 BIOMT2 27 0.809017 0.500000 -0.309017 -0.28522 REMARK 350 BIOMT3 27 -0.500000 0.309017 -0.809017 470.90626 REMARK 350 BIOMT1 28 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 28 0.000000 -1.000000 0.000000 472.57599 REMARK 350 BIOMT3 28 0.000000 0.000000 -1.000000 470.72998 REMARK 350 BIOMT1 29 0.309017 0.809017 -0.500000 89.79248 REMARK 350 BIOMT2 29 0.809017 -0.500000 -0.309017 236.00277 REMARK 350 BIOMT3 29 -0.500000 -0.309017 -0.809017 616.94027 REMARK 350 BIOMT1 30 0.309017 -0.809017 -0.500000 472.11449 REMARK 350 BIOMT2 30 -0.809017 -0.500000 0.309017 472.86121 REMARK 350 BIOMT3 30 -0.500000 0.309017 -0.809017 470.90626 REMARK 350 BIOMT1 31 -1.000000 0.000000 0.000000 472.57599 REMARK 350 BIOMT2 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 0.000000 -1.000000 470.72998 REMARK 350 BIOMT1 32 0.809017 0.500000 -0.309017 -0.28522 REMARK 350 BIOMT2 32 -0.500000 0.309017 -0.809017 471.82926 REMARK 350 BIOMT3 32 -0.309017 0.809017 0.500000 -0.46150 REMARK 350 BIOMT1 33 0.000000 -1.000000 0.000000 472.57599 REMARK 350 BIOMT2 33 0.000000 0.000000 -1.000000 471.65298 REMARK 350 BIOMT3 33 1.000000 0.000000 0.000000 -0.92300 REMARK 350 BIOMT1 34 -0.809017 0.500000 0.309017 236.57322 REMARK 350 BIOMT2 34 -0.500000 -0.309017 -0.809017 617.86327 REMARK 350 BIOMT3 34 -0.309017 -0.809017 0.500000 381.86050 REMARK 350 BIOMT1 35 -0.500000 -0.309017 0.809017 237.03472 REMARK 350 BIOMT2 35 -0.309017 -0.809017 -0.500000 618.14850 REMARK 350 BIOMT3 35 0.809017 -0.500000 0.309017 89.61620 REMARK 350 BIOMT1 36 0.309017 0.809017 0.500000 -145.57251 REMARK 350 BIOMT2 36 -0.809017 0.500000 -0.309017 382.03678 REMARK 350 BIOMT3 36 -0.500000 -0.309017 0.809017 236.11172 REMARK 350 BIOMT1 37 0.809017 -0.500000 0.309017 90.53921 REMARK 350 BIOMT2 37 0.500000 0.309017 -0.809017 235.54127 REMARK 350 BIOMT3 37 0.309017 0.809017 0.500000 -146.49551 REMARK 350 BIOMT1 38 0.809017 0.500000 0.309017 -145.74879 REMARK 350 BIOMT2 38 0.500000 -0.309017 -0.809017 381.57528 REMARK 350 BIOMT3 38 -0.309017 0.809017 -0.500000 234.90349 REMARK 350 BIOMT1 39 0.309017 -0.809017 0.500000 236.74950 REMARK 350 BIOMT2 39 -0.809017 -0.500000 -0.309017 618.32478 REMARK 350 BIOMT3 39 0.500000 -0.309017 -0.809017 380.65228 REMARK 350 BIOMT1 40 -0.500000 0.309017 0.809017 91.00071 REMARK 350 BIOMT2 40 -0.309017 0.809017 -0.500000 235.82649 REMARK 350 BIOMT3 40 -0.809017 -0.500000 -0.309017 617.40177 REMARK 350 BIOMT1 41 0.000000 0.000000 1.000000 0.92300 REMARK 350 BIOMT2 41 -1.000000 0.000000 0.000000 472.57599 REMARK 350 BIOMT3 41 0.000000 -1.000000 0.000000 471.65298 REMARK 350 BIOMT1 42 0.500000 0.309017 0.809017 -145.28729 REMARK 350 BIOMT2 42 0.309017 0.809017 -0.500000 89.79248 REMARK 350 BIOMT3 42 -0.809017 0.500000 0.309017 235.65021 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.74673 REMARK 350 BIOMT2 43 0.309017 -0.809017 -0.500000 472.11449 REMARK 350 BIOMT3 43 0.809017 0.500000 -0.309017 -1.20823 REMARK 350 BIOMT1 44 0.309017 0.809017 0.500000 -145.57251 REMARK 350 BIOMT2 44 0.809017 -0.500000 0.309017 90.53921 REMARK 350 BIOMT3 44 0.500000 0.309017 -0.809017 234.61826 REMARK 350 BIOMT1 45 0.809017 -0.500000 0.309017 90.53921 REMARK 350 BIOMT2 45 -0.500000 -0.309017 0.809017 237.03472 REMARK 350 BIOMT3 45 -0.309017 -0.809017 -0.500000 617.22549 REMARK 350 BIOMT1 46 -0.500000 -0.309017 0.809017 237.03472 REMARK 350 BIOMT2 46 0.309017 0.809017 0.500000 -145.57251 REMARK 350 BIOMT3 46 -0.809017 0.500000 -0.309017 381.11378 REMARK 350 BIOMT1 47 0.500000 -0.309017 0.809017 0.74673 REMARK 350 BIOMT2 47 -0.309017 0.809017 0.500000 0.46150 REMARK 350 BIOMT3 47 -0.809017 -0.500000 0.309017 471.93821 REMARK 350 BIOMT1 48 0.000000 0.000000 1.000000 0.92300 REMARK 350 BIOMT2 48 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 1.000000 0.000000 -0.92300 REMARK 350 BIOMT1 49 0.500000 0.309017 0.809017 -145.28729 REMARK 350 BIOMT2 49 -0.309017 -0.809017 0.500000 382.78351 REMARK 350 BIOMT3 49 0.809017 -0.500000 -0.309017 235.07977 REMARK 350 BIOMT1 50 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 50 0.000000 0.000000 1.000000 0.92300 REMARK 350 BIOMT3 50 1.000000 0.000000 0.000000 -0.92300 REMARK 350 BIOMT1 51 0.809017 -0.500000 -0.309017 236.00277 REMARK 350 BIOMT2 51 0.500000 0.309017 0.809017 -145.28729 REMARK 350 BIOMT3 51 -0.309017 -0.809017 0.500000 381.86050 REMARK 350 BIOMT1 52 -0.809017 -0.500000 0.309017 472.86121 REMARK 350 BIOMT2 52 0.500000 -0.309017 0.809017 0.74673 REMARK 350 BIOMT3 52 -0.309017 0.809017 0.500000 -0.46150 REMARK 350 BIOMT1 53 0.309017 -0.809017 0.500000 236.74950 REMARK 350 BIOMT2 53 0.809017 0.500000 0.309017 -145.74879 REMARK 350 BIOMT3 53 -0.500000 0.309017 0.809017 90.07770 REMARK 350 BIOMT1 54 -0.500000 0.309017 0.809017 91.00071 REMARK 350 BIOMT2 54 0.309017 -0.809017 0.500000 236.74950 REMARK 350 BIOMT3 54 0.809017 0.500000 0.309017 -146.67179 REMARK 350 BIOMT1 55 0.809017 0.500000 0.309017 -145.74879 REMARK 350 BIOMT2 55 -0.500000 0.309017 0.809017 91.00071 REMARK 350 BIOMT3 55 0.309017 -0.809017 0.500000 235.82649 REMARK 350 BIOMT1 56 0.309017 0.809017 -0.500000 89.79248 REMARK 350 BIOMT2 56 -0.809017 0.500000 0.309017 236.57322 REMARK 350 BIOMT3 56 0.500000 0.309017 0.809017 -146.21029 REMARK 350 BIOMT1 57 0.309017 -0.809017 -0.500000 472.11449 REMARK 350 BIOMT2 57 0.809017 0.500000 -0.309017 -0.28522 REMARK 350 BIOMT3 57 0.500000 -0.309017 0.809017 -0.17628 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 472.57599 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 472.57599 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.309017 -0.809017 0.500000 382.78351 REMARK 350 BIOMT2 59 0.809017 -0.500000 -0.309017 236.00277 REMARK 350 BIOMT3 59 0.500000 0.309017 0.809017 -146.21029 REMARK 350 BIOMT1 60 -0.309017 0.809017 0.500000 0.46150 REMARK 350 BIOMT2 60 -0.809017 -0.500000 0.309017 472.86121 REMARK 350 BIOMT3 60 0.500000 -0.309017 0.809017 -0.17628 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 24 REMARK 465 ARG A 25 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 60 -60.41 -139.49 REMARK 500 PRO B 370 37.51 -77.90 REMARK 500 LEU B 400 40.60 -80.92 REMARK 500 LEU B 401 -134.07 60.04 REMARK 500 THR C 38 -38.26 59.45 REMARK 500 ASP C 113 49.19 -80.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU C 57 HIS C 58 148.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-77390 RELATED DB: EMDB REMARK 900 STRUCTURE OF THE PHIX174 BACTERIOPHAGE DBREF 36CQ A 1 38 UNP P69592 J_BPPHS 1 38 DBREF 36CQ B 1 427 UNP P03641 CAPSD_BPPHS 1 427 DBREF 36CQ C 1 175 UNP A3FJA7 A3FJA7_BPPHX 1 175 SEQRES 1 A 38 MET SER LYS GLY LYS LYS ARG SER GLY ALA ARG PRO GLY SEQRES 2 A 38 ARG PRO GLN PRO LEU ARG GLY THR LYS GLY LYS ARG LYS SEQRES 3 A 38 GLY ALA ARG LEU TRP TYR VAL GLY GLY GLN GLN PHE SEQRES 1 B 427 MET SER ASN ILE GLN THR GLY ALA GLU ARG MET PRO HIS SEQRES 2 B 427 ASP LEU SER HIS LEU GLY PHE LEU ALA GLY GLN ILE GLY SEQRES 3 B 427 ARG LEU ILE THR ILE SER THR THR PRO VAL ILE ALA GLY SEQRES 4 B 427 ASP SER PHE GLU MET ASP ALA VAL GLY ALA LEU ARG LEU SEQRES 5 B 427 SER PRO LEU ARG ARG GLY LEU ALA ILE ASP SER THR VAL SEQRES 6 B 427 ASP ILE PHE THR PHE TYR VAL PRO HIS ARG HIS VAL TYR SEQRES 7 B 427 GLY GLU GLN TRP ILE LYS PHE MET LYS ASP GLY VAL ASN SEQRES 8 B 427 ALA THR PRO LEU PRO THR VAL ASN THR THR GLY TYR ILE SEQRES 9 B 427 ASP HIS ALA ALA PHE LEU GLY THR ILE ASN PRO ASP THR SEQRES 10 B 427 ASN LYS ILE PRO LYS HIS LEU PHE GLN GLY TYR LEU ASN SEQRES 11 B 427 ILE TYR ASN ASN TYR PHE LYS ALA PRO TRP MET PRO ASP SEQRES 12 B 427 ARG THR GLU ALA ASN PRO ASN GLU LEU ASN GLN ASP ASP SEQRES 13 B 427 ALA ARG TYR GLY PHE ARG CYS CYS HIS LEU LYS ASN ILE SEQRES 14 B 427 TRP THR ALA PRO LEU PRO PRO GLU THR GLU LEU SER ARG SEQRES 15 B 427 GLN MET THR THR SER THR THR SER ILE ASP ILE MET GLY SEQRES 16 B 427 LEU GLN ALA ALA TYR ALA ASN LEU HIS THR ASP GLN GLU SEQRES 17 B 427 ARG ASP TYR PHE MET GLN ARG TYR HIS ASP VAL ILE SER SEQRES 18 B 427 SER PHE GLY GLY LYS THR SER TYR ASP ALA ASP ASN ARG SEQRES 19 B 427 PRO LEU LEU VAL MET ARG SER ASN LEU TRP ALA SER GLY SEQRES 20 B 427 TYR ASP VAL ASP GLY THR ASP GLN THR SER LEU GLY GLN SEQRES 21 B 427 PHE SER GLY ARG VAL GLN GLN THR TYR LYS HIS SER VAL SEQRES 22 B 427 PRO ARG PHE PHE VAL PRO GLU HIS GLY THR MET PHE THR SEQRES 23 B 427 LEU ALA LEU VAL ARG PHE PRO PRO THR ALA THR LYS GLU SEQRES 24 B 427 ILE GLN TYR LEU ASN ALA LYS GLY ALA LEU THR TYR THR SEQRES 25 B 427 ASP ILE ALA GLY ASP PRO VAL LEU TYR GLY ASN LEU PRO SEQRES 26 B 427 PRO ARG GLU ILE SER MET LYS ASP VAL PHE ARG SER GLY SEQRES 27 B 427 ASP SER SER LYS LYS PHE LYS ILE ALA GLU GLY GLN TRP SEQRES 28 B 427 TYR ARG TYR ALA PRO SER TYR VAL SER PRO ALA TYR HIS SEQRES 29 B 427 LEU LEU GLU GLY PHE PRO PHE ILE GLN GLU PRO PRO SER SEQRES 30 B 427 GLY ASP LEU GLN GLU ARG VAL LEU ILE ARG HIS HIS ASP SEQRES 31 B 427 TYR ASP GLN CYS PHE GLN SER VAL GLN LEU LEU GLN TRP SEQRES 32 B 427 ASN SER GLN VAL LYS PHE ASN VAL THR VAL TYR ARG ASN SEQRES 33 B 427 LEU PRO THR THR ARG ASP SER ILE MET THR SER SEQRES 1 C 175 MET PHE GLN THR PHE ILE SER ARG HIS ASN SER ASN PHE SEQRES 2 C 175 PHE SER ASP LYS LEU VAL LEU THR SER VAL THR PRO ALA SEQRES 3 C 175 SER SER ALA PRO VAL LEU GLN THR PRO LYS ALA THR SER SEQRES 4 C 175 SER THR LEU TYR PHE ASP SER LEU THR VAL ASN ALA GLY SEQRES 5 C 175 ASN GLY GLY PHE LEU HIS CYS ILE GLN MET ASP THR SER SEQRES 6 C 175 VAL ASN ALA ALA ASN GLN VAL VAL SER VAL GLY ALA ASP SEQRES 7 C 175 ILE ALA PHE ASP ALA ASP PRO LYS PHE PHE ALA CYS LEU SEQRES 8 C 175 VAL ARG PHE GLU SER SER SER VAL PRO THR THR LEU PRO SEQRES 9 C 175 THR ALA TYR ASP VAL TYR PRO LEU ASP GLY ARG HIS ASP SEQRES 10 C 175 GLY GLY TYR TYR THR VAL LYS ASP CYS VAL THR ILE ASP SEQRES 11 C 175 VAL LEU PRO ARG THR PRO GLY ASN ASN VAL TYR VAL GLY SEQRES 12 C 175 PHE MET VAL TRP SER ASN PHE THR ALA THR LYS CYS ARG SEQRES 13 C 175 GLY LEU VAL SER LEU ASN GLN VAL ILE LYS GLU ILE ILE SEQRES 14 C 175 CYS LEU GLN PRO LEU LYS HELIX 1 AA1 HIS B 74 GLY B 79 1 6 HELIX 2 AA2 GLY B 79 GLY B 89 1 11 HELIX 3 AA3 VAL B 90 ALA B 92 5 3 HELIX 4 AA4 ALA B 107 GLY B 111 5 5 HELIX 5 AA5 LYS B 122 PHE B 136 1 15 HELIX 6 AA6 ASN B 148 LEU B 152 5 5 HELIX 7 AA7 ASN B 153 GLY B 160 1 8 HELIX 8 AA8 ASP B 192 PHE B 212 1 21 HELIX 9 AA9 ARG B 215 PHE B 223 1 9 HELIX 10 AB1 SER B 228 ASN B 233 1 6 HELIX 11 AB2 GLN B 301 LYS B 306 1 6 HELIX 12 AB3 THR B 310 ALA B 315 1 6 HELIX 13 AB4 ASP B 317 GLY B 322 1 6 HELIX 14 AB5 LYS B 332 VAL B 334 5 3 HELIX 15 AB6 GLY B 349 ARG B 353 5 5 HELIX 16 AB7 SER B 360 HIS B 364 5 5 HELIX 17 AB8 ASP B 379 LEU B 385 1 7 HELIX 18 AB9 ARG B 387 ASP B 392 5 6 HELIX 19 AC1 THR B 419 MET B 425 1 7 SHEET 1 AA1 3 ARG B 10 ASP B 14 0 SHEET 2 AA1 3 TRP B 403 ASN B 416 -1 O ARG B 415 N MET B 11 SHEET 3 AA1 3 HIS B 17 GLY B 23 -1 N LEU B 21 O SER B 405 SHEET 1 AA2 5 ARG B 10 ASP B 14 0 SHEET 2 AA2 5 TRP B 403 ASN B 416 -1 O ARG B 415 N MET B 11 SHEET 3 AA2 5 SER B 41 LEU B 52 -1 N ARG B 51 O ASN B 404 SHEET 4 AA2 5 PHE B 261 PHE B 277 -1 O GLN B 267 N LEU B 50 SHEET 5 AA2 5 GLY B 247 ASP B 251 -1 N TYR B 248 O ARG B 264 SHEET 1 AA3 5 PHE B 161 ARG B 162 0 SHEET 2 AA3 5 ARG B 27 VAL B 36 -1 N LEU B 28 O PHE B 161 SHEET 3 AA3 5 GLY B 282 ARG B 291 -1 O THR B 286 N SER B 32 SHEET 4 AA3 5 THR B 64 PRO B 73 -1 N THR B 64 O ARG B 291 SHEET 5 AA3 5 LEU B 236 TRP B 244 -1 O VAL B 238 N THR B 69 SHEET 1 AA4 2 THR B 97 ASN B 99 0 SHEET 2 AA4 2 LYS B 119 PRO B 121 -1 O ILE B 120 N VAL B 98 SHEET 1 AA5 2 ARG B 327 SER B 330 0 SHEET 2 AA5 2 LYS B 343 ILE B 346 -1 O PHE B 344 N ILE B 329 SHEET 1 AA6 3 SER C 15 LYS C 17 0 SHEET 2 AA6 3 SER C 39 VAL C 49 1 O THR C 41 N ASP C 16 SHEET 3 AA6 3 SER C 22 VAL C 23 1 N VAL C 23 O THR C 48 SHEET 1 AA7 6 SER C 15 LYS C 17 0 SHEET 2 AA7 6 SER C 39 VAL C 49 1 O THR C 41 N ASP C 16 SHEET 3 AA7 6 THR C 153 GLN C 163 -1 O VAL C 159 N LEU C 42 SHEET 4 AA7 6 ASN C 70 PHE C 81 -1 N ALA C 80 O ARG C 156 SHEET 5 AA7 6 TYR C 120 ASP C 130 -1 O VAL C 127 N VAL C 73 SHEET 6 AA7 6 ARG C 115 ASP C 117 -1 N ARG C 115 O THR C 122 SHEET 1 AA8 4 GLY C 52 GLN C 61 0 SHEET 2 AA8 4 ASN C 139 PHE C 150 -1 O SER C 148 N GLY C 54 SHEET 3 AA8 4 PHE C 88 SER C 96 -1 N PHE C 94 O TYR C 141 SHEET 4 AA8 4 TYR C 107 PRO C 111 -1 O TYR C 110 N LEU C 91 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 328 0 0 19 30 0 0 6 4996 3 0 50 END