data_36NB # _entry.id 36NB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.416 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 36NB pdb_000036nb 10.2210/pdb36nb/pdb WWPDB D_1000309165 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-08-19 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 36NB _pdbx_database_status.recvd_initial_deposition_date 2026-06-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email hyun-joo.nam@etamu.edu _pdbx_contact_author.name_first Hyun-Joo _pdbx_contact_author.name_last Nam _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0235-9311 # _audit_author.name 'Nam, H.J.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-0235-9311 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_id_ASTM ACSFEN _citation.journal_id_CSD ? _citation.journal_id_ISSN 2053-230X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of the NKX2-1 homeodomain bound to a palindromic DNA recognition sequence.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2053230X26007466 _citation.pdbx_database_id_PubMed 42565819 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mohandas, A.' 1 ? primary 'Nam, H.J.' 2 0000-0002-0235-9311 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Homeobox protein Nkx-2.1' 7490.740 4 ? ? ? ? 2 polymer syn 'DAN TCAAGTGGGCCCCACTTGA' 5805.761 2 ? ? ? ? 3 polymer syn 'DNA TCAAGTGGGGCCCACTTGA' 5845.785 2 ? ? ? ? 4 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Homeobox protein NK-2 homolog A,Thyroid nuclear factor 1,Thyroid transcription factor 1,TTF-1,Thyroid-specific enhancer-binding protein,T/EBP ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no KRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKD KRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKD A,B,C,D ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DA)(DG)(DT)(DG)(DG)(DG)(DC)(DC)(DC)(DC)(DA)(DC)(DT)(DT)(DG)(DA)' TCAAGTGGGCCCCACTTGA E,G ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DA)(DA)(DG)(DT)(DG)(DG)(DG)(DG)(DC)(DC)(DC)(DA)(DC)(DT)(DT)(DG)(DA)' TCAAGTGGGGCCCACTTGA F,H ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ARG n 1 3 ARG n 1 4 VAL n 1 5 LEU n 1 6 PHE n 1 7 SER n 1 8 GLN n 1 9 ALA n 1 10 GLN n 1 11 VAL n 1 12 TYR n 1 13 GLU n 1 14 LEU n 1 15 GLU n 1 16 ARG n 1 17 ARG n 1 18 PHE n 1 19 LYS n 1 20 GLN n 1 21 GLN n 1 22 LYS n 1 23 TYR n 1 24 LEU n 1 25 SER n 1 26 ALA n 1 27 PRO n 1 28 GLU n 1 29 ARG n 1 30 GLU n 1 31 HIS n 1 32 LEU n 1 33 ALA n 1 34 SER n 1 35 MET n 1 36 ILE n 1 37 HIS n 1 38 LEU n 1 39 THR n 1 40 PRO n 1 41 THR n 1 42 GLN n 1 43 VAL n 1 44 LYS n 1 45 ILE n 1 46 TRP n 1 47 PHE n 1 48 GLN n 1 49 ASN n 1 50 HIS n 1 51 ARG n 1 52 TYR n 1 53 LYS n 1 54 MET n 1 55 LYS n 1 56 ARG n 1 57 GLN n 1 58 ALA n 1 59 LYS n 1 60 ASP n 2 1 DT n 2 2 DC n 2 3 DA n 2 4 DA n 2 5 DG n 2 6 DT n 2 7 DG n 2 8 DG n 2 9 DG n 2 10 DC n 2 11 DC n 2 12 DC n 2 13 DC n 2 14 DA n 2 15 DC n 2 16 DT n 2 17 DT n 2 18 DG n 2 19 DA n 3 1 DT n 3 2 DC n 3 3 DA n 3 4 DA n 3 5 DG n 3 6 DT n 3 7 DG n 3 8 DG n 3 9 DG n 3 10 DG n 3 11 DC n 3 12 DC n 3 13 DC n 3 14 DA n 3 15 DC n 3 16 DT n 3 17 DT n 3 18 DG n 3 19 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 60 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NKX2-1, NKX2A, TITF1, TTF1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMAL-c2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 19 'Homo sapiens' ? 9606 ? 3 1 sample 1 19 'Homo sapiens' ? 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 163 163 LYS LYS A . n A 1 2 ARG 2 164 164 ARG ARG A . n A 1 3 ARG 3 165 165 ARG ARG A . n A 1 4 VAL 4 166 166 VAL VAL A . n A 1 5 LEU 5 167 167 LEU LEU A . n A 1 6 PHE 6 168 168 PHE PHE A . n A 1 7 SER 7 169 169 SER SER A . n A 1 8 GLN 8 170 170 GLN GLN A . n A 1 9 ALA 9 171 171 ALA ALA A . n A 1 10 GLN 10 172 172 GLN GLN A . n A 1 11 VAL 11 173 173 VAL VAL A . n A 1 12 TYR 12 174 174 TYR TYR A . n A 1 13 GLU 13 175 175 GLU GLU A . n A 1 14 LEU 14 176 176 LEU LEU A . n A 1 15 GLU 15 177 177 GLU GLU A . n A 1 16 ARG 16 178 178 ARG ARG A . n A 1 17 ARG 17 179 179 ARG ARG A . n A 1 18 PHE 18 180 180 PHE PHE A . n A 1 19 LYS 19 181 181 LYS LYS A . n A 1 20 GLN 20 182 182 GLN GLN A . n A 1 21 GLN 21 183 183 GLN GLN A . n A 1 22 LYS 22 184 184 LYS LYS A . n A 1 23 TYR 23 185 185 TYR TYR A . n A 1 24 LEU 24 186 186 LEU LEU A . n A 1 25 SER 25 187 187 SER SER A . n A 1 26 ALA 26 188 188 ALA ALA A . n A 1 27 PRO 27 189 189 PRO PRO A . n A 1 28 GLU 28 190 190 GLU GLU A . n A 1 29 ARG 29 191 191 ARG ARG A . n A 1 30 GLU 30 192 192 GLU GLU A . n A 1 31 HIS 31 193 193 HIS HIS A . n A 1 32 LEU 32 194 194 LEU LEU A . n A 1 33 ALA 33 195 195 ALA ALA A . n A 1 34 SER 34 196 196 SER SER A . n A 1 35 MET 35 197 197 MET MET A . n A 1 36 ILE 36 198 198 ILE ILE A . n A 1 37 HIS 37 199 199 HIS HIS A . n A 1 38 LEU 38 200 200 LEU LEU A . n A 1 39 THR 39 201 201 THR THR A . n A 1 40 PRO 40 202 202 PRO PRO A . n A 1 41 THR 41 203 203 THR THR A . n A 1 42 GLN 42 204 204 GLN GLN A . n A 1 43 VAL 43 205 205 VAL VAL A . n A 1 44 LYS 44 206 206 LYS LYS A . n A 1 45 ILE 45 207 207 ILE ILE A . n A 1 46 TRP 46 208 208 TRP TRP A . n A 1 47 PHE 47 209 209 PHE PHE A . n A 1 48 GLN 48 210 210 GLN GLN A . n A 1 49 ASN 49 211 211 ASN ASN A . n A 1 50 HIS 50 212 212 HIS HIS A . n A 1 51 ARG 51 213 213 ARG ARG A . n A 1 52 TYR 52 214 214 TYR TYR A . n A 1 53 LYS 53 215 215 LYS LYS A . n A 1 54 MET 54 216 216 MET MET A . n A 1 55 LYS 55 217 217 LYS LYS A . n A 1 56 ARG 56 218 218 ARG ARG A . n A 1 57 GLN 57 219 219 GLN GLN A . n A 1 58 ALA 58 220 220 ALA ALA A . n A 1 59 LYS 59 221 221 LYS LYS A . n A 1 60 ASP 60 222 222 ASP ASP A . n B 1 1 LYS 1 163 ? ? ? B . n B 1 2 ARG 2 164 ? ? ? B . n B 1 3 ARG 3 165 165 ARG ARG B . n B 1 4 VAL 4 166 166 VAL VAL B . n B 1 5 LEU 5 167 167 LEU LEU B . n B 1 6 PHE 6 168 168 PHE PHE B . n B 1 7 SER 7 169 169 SER SER B . n B 1 8 GLN 8 170 170 GLN GLN B . n B 1 9 ALA 9 171 171 ALA ALA B . n B 1 10 GLN 10 172 172 GLN GLN B . n B 1 11 VAL 11 173 173 VAL VAL B . n B 1 12 TYR 12 174 174 TYR TYR B . n B 1 13 GLU 13 175 175 GLU GLU B . n B 1 14 LEU 14 176 176 LEU LEU B . n B 1 15 GLU 15 177 177 GLU GLU B . n B 1 16 ARG 16 178 178 ARG ARG B . n B 1 17 ARG 17 179 179 ARG ARG B . n B 1 18 PHE 18 180 180 PHE PHE B . n B 1 19 LYS 19 181 181 LYS LYS B . n B 1 20 GLN 20 182 182 GLN GLN B . n B 1 21 GLN 21 183 183 GLN GLN B . n B 1 22 LYS 22 184 184 LYS LYS B . n B 1 23 TYR 23 185 185 TYR TYR B . n B 1 24 LEU 24 186 186 LEU LEU B . n B 1 25 SER 25 187 187 SER SER B . n B 1 26 ALA 26 188 188 ALA ALA B . n B 1 27 PRO 27 189 189 PRO PRO B . n B 1 28 GLU 28 190 190 GLU GLU B . n B 1 29 ARG 29 191 191 ARG ARG B . n B 1 30 GLU 30 192 192 GLU GLU B . n B 1 31 HIS 31 193 193 HIS HIS B . n B 1 32 LEU 32 194 194 LEU LEU B . n B 1 33 ALA 33 195 195 ALA ALA B . n B 1 34 SER 34 196 196 SER SER B . n B 1 35 MET 35 197 197 MET MET B . n B 1 36 ILE 36 198 198 ILE ILE B . n B 1 37 HIS 37 199 199 HIS HIS B . n B 1 38 LEU 38 200 200 LEU LEU B . n B 1 39 THR 39 201 201 THR THR B . n B 1 40 PRO 40 202 202 PRO PRO B . n B 1 41 THR 41 203 203 THR THR B . n B 1 42 GLN 42 204 204 GLN GLN B . n B 1 43 VAL 43 205 205 VAL VAL B . n B 1 44 LYS 44 206 206 LYS LYS B . n B 1 45 ILE 45 207 207 ILE ILE B . n B 1 46 TRP 46 208 208 TRP TRP B . n B 1 47 PHE 47 209 209 PHE PHE B . n B 1 48 GLN 48 210 210 GLN GLN B . n B 1 49 ASN 49 211 211 ASN ASN B . n B 1 50 HIS 50 212 212 HIS HIS B . n B 1 51 ARG 51 213 213 ARG ARG B . n B 1 52 TYR 52 214 214 TYR TYR B . n B 1 53 LYS 53 215 215 LYS LYS B . n B 1 54 MET 54 216 216 MET MET B . n B 1 55 LYS 55 217 217 LYS LYS B . n B 1 56 ARG 56 218 218 ARG ARG B . n B 1 57 GLN 57 219 219 GLN GLN B . n B 1 58 ALA 58 220 ? ? ? B . n B 1 59 LYS 59 221 ? ? ? B . n B 1 60 ASP 60 222 ? ? ? B . n C 1 1 LYS 1 163 ? ? ? C . n C 1 2 ARG 2 164 ? ? ? C . n C 1 3 ARG 3 165 165 ARG ARG C . n C 1 4 VAL 4 166 166 VAL VAL C . n C 1 5 LEU 5 167 167 LEU LEU C . n C 1 6 PHE 6 168 168 PHE PHE C . n C 1 7 SER 7 169 169 SER SER C . n C 1 8 GLN 8 170 170 GLN GLN C . n C 1 9 ALA 9 171 171 ALA ALA C . n C 1 10 GLN 10 172 172 GLN GLN C . n C 1 11 VAL 11 173 173 VAL VAL C . n C 1 12 TYR 12 174 174 TYR TYR C . n C 1 13 GLU 13 175 175 GLU GLU C . n C 1 14 LEU 14 176 176 LEU LEU C . n C 1 15 GLU 15 177 177 GLU GLU C . n C 1 16 ARG 16 178 178 ARG ARG C . n C 1 17 ARG 17 179 179 ARG ARG C . n C 1 18 PHE 18 180 180 PHE PHE C . n C 1 19 LYS 19 181 181 LYS LYS C . n C 1 20 GLN 20 182 182 GLN GLN C . n C 1 21 GLN 21 183 183 GLN GLN C . n C 1 22 LYS 22 184 184 LYS LYS C . n C 1 23 TYR 23 185 185 TYR TYR C . n C 1 24 LEU 24 186 186 LEU LEU C . n C 1 25 SER 25 187 187 SER SER C . n C 1 26 ALA 26 188 188 ALA ALA C . n C 1 27 PRO 27 189 189 PRO PRO C . n C 1 28 GLU 28 190 190 GLU GLU C . n C 1 29 ARG 29 191 191 ARG ARG C . n C 1 30 GLU 30 192 192 GLU GLU C . n C 1 31 HIS 31 193 193 HIS HIS C . n C 1 32 LEU 32 194 194 LEU LEU C . n C 1 33 ALA 33 195 195 ALA ALA C . n C 1 34 SER 34 196 196 SER SER C . n C 1 35 MET 35 197 197 MET MET C . n C 1 36 ILE 36 198 198 ILE ILE C . n C 1 37 HIS 37 199 199 HIS HIS C . n C 1 38 LEU 38 200 200 LEU LEU C . n C 1 39 THR 39 201 201 THR THR C . n C 1 40 PRO 40 202 202 PRO PRO C . n C 1 41 THR 41 203 203 THR THR C . n C 1 42 GLN 42 204 204 GLN GLN C . n C 1 43 VAL 43 205 205 VAL VAL C . n C 1 44 LYS 44 206 206 LYS LYS C . n C 1 45 ILE 45 207 207 ILE ILE C . n C 1 46 TRP 46 208 208 TRP TRP C . n C 1 47 PHE 47 209 209 PHE PHE C . n C 1 48 GLN 48 210 210 GLN GLN C . n C 1 49 ASN 49 211 211 ASN ASN C . n C 1 50 HIS 50 212 212 HIS HIS C . n C 1 51 ARG 51 213 213 ARG ARG C . n C 1 52 TYR 52 214 214 TYR TYR C . n C 1 53 LYS 53 215 215 LYS LYS C . n C 1 54 MET 54 216 216 MET MET C . n C 1 55 LYS 55 217 217 LYS LYS C . n C 1 56 ARG 56 218 218 ARG ARG C . n C 1 57 GLN 57 219 219 GLN GLN C . n C 1 58 ALA 58 220 ? ? ? C . n C 1 59 LYS 59 221 ? ? ? C . n C 1 60 ASP 60 222 ? ? ? C . n D 1 1 LYS 1 163 ? ? ? D . n D 1 2 ARG 2 164 ? ? ? D . n D 1 3 ARG 3 165 ? ? ? D . n D 1 4 VAL 4 166 166 VAL VAL D . n D 1 5 LEU 5 167 167 LEU LEU D . n D 1 6 PHE 6 168 168 PHE PHE D . n D 1 7 SER 7 169 169 SER SER D . n D 1 8 GLN 8 170 170 GLN GLN D . n D 1 9 ALA 9 171 171 ALA ALA D . n D 1 10 GLN 10 172 172 GLN GLN D . n D 1 11 VAL 11 173 173 VAL VAL D . n D 1 12 TYR 12 174 174 TYR TYR D . n D 1 13 GLU 13 175 175 GLU GLU D . n D 1 14 LEU 14 176 176 LEU LEU D . n D 1 15 GLU 15 177 177 GLU GLU D . n D 1 16 ARG 16 178 178 ARG ARG D . n D 1 17 ARG 17 179 179 ARG ARG D . n D 1 18 PHE 18 180 180 PHE PHE D . n D 1 19 LYS 19 181 181 LYS LYS D . n D 1 20 GLN 20 182 182 GLN GLN D . n D 1 21 GLN 21 183 183 GLN GLN D . n D 1 22 LYS 22 184 184 LYS LYS D . n D 1 23 TYR 23 185 185 TYR TYR D . n D 1 24 LEU 24 186 186 LEU LEU D . n D 1 25 SER 25 187 187 SER SER D . n D 1 26 ALA 26 188 188 ALA ALA D . n D 1 27 PRO 27 189 189 PRO PRO D . n D 1 28 GLU 28 190 190 GLU GLU D . n D 1 29 ARG 29 191 191 ARG ARG D . n D 1 30 GLU 30 192 192 GLU GLU D . n D 1 31 HIS 31 193 193 HIS HIS D . n D 1 32 LEU 32 194 194 LEU LEU D . n D 1 33 ALA 33 195 195 ALA ALA D . n D 1 34 SER 34 196 196 SER SER D . n D 1 35 MET 35 197 197 MET MET D . n D 1 36 ILE 36 198 198 ILE ILE D . n D 1 37 HIS 37 199 199 HIS HIS D . n D 1 38 LEU 38 200 200 LEU LEU D . n D 1 39 THR 39 201 201 THR THR D . n D 1 40 PRO 40 202 202 PRO PRO D . n D 1 41 THR 41 203 203 THR THR D . n D 1 42 GLN 42 204 204 GLN GLN D . n D 1 43 VAL 43 205 205 VAL VAL D . n D 1 44 LYS 44 206 206 LYS LYS D . n D 1 45 ILE 45 207 207 ILE ILE D . n D 1 46 TRP 46 208 208 TRP TRP D . n D 1 47 PHE 47 209 209 PHE PHE D . n D 1 48 GLN 48 210 210 GLN GLN D . n D 1 49 ASN 49 211 211 ASN ASN D . n D 1 50 HIS 50 212 212 HIS HIS D . n D 1 51 ARG 51 213 213 ARG ARG D . n D 1 52 TYR 52 214 214 TYR TYR D . n D 1 53 LYS 53 215 215 LYS LYS D . n D 1 54 MET 54 216 216 MET MET D . n D 1 55 LYS 55 217 217 LYS LYS D . n D 1 56 ARG 56 218 ? ? ? D . n D 1 57 GLN 57 219 ? ? ? D . n D 1 58 ALA 58 220 ? ? ? D . n D 1 59 LYS 59 221 ? ? ? D . n D 1 60 ASP 60 222 ? ? ? D . n E 2 1 DT 1 1 1 DT DT E . n E 2 2 DC 2 2 2 DC DC E . n E 2 3 DA 3 3 3 DA DA E . n E 2 4 DA 4 4 4 DA DA E . n E 2 5 DG 5 5 5 DG DG E . n E 2 6 DT 6 6 6 DT DT E . n E 2 7 DG 7 7 7 DG DG E . n E 2 8 DG 8 8 8 DG DG E . n E 2 9 DG 9 9 9 DG DG E . n E 2 10 DC 10 10 10 DC DC E . n E 2 11 DC 11 11 11 DC DC E . n E 2 12 DC 12 12 12 DC DC E . n E 2 13 DC 13 13 13 DC DC E . n E 2 14 DA 14 14 14 DA DA E . n E 2 15 DC 15 15 15 DC DC E . n E 2 16 DT 16 16 16 DT DT E . n E 2 17 DT 17 17 17 DT DT E . n E 2 18 DG 18 18 18 DG DG E . n E 2 19 DA 19 19 19 DA DA E . n F 3 1 DT 1 1 1 DT DT F . n F 3 2 DC 2 2 2 DC DC F . n F 3 3 DA 3 3 3 DA DA F . n F 3 4 DA 4 4 4 DA DA F . n F 3 5 DG 5 5 5 DG DG F . n F 3 6 DT 6 6 6 DT DT F . n F 3 7 DG 7 7 7 DG DG F . n F 3 8 DG 8 8 8 DG DG F . n F 3 9 DG 9 9 9 DG DG F . n F 3 10 DG 10 10 10 DG DG F . n F 3 11 DC 11 11 11 DC DC F . n F 3 12 DC 12 12 12 DC DC F . n F 3 13 DC 13 13 13 DC DC F . n F 3 14 DA 14 14 14 DA DA F . n F 3 15 DC 15 15 15 DC DC F . n F 3 16 DT 16 16 16 DT DT F . n F 3 17 DT 17 17 17 DT DT F . n F 3 18 DG 18 18 18 DG DG F . n F 3 19 DA 19 19 19 DA DA F . n G 2 1 DT 1 1 1 DT DT G . n G 2 2 DC 2 2 2 DC DC G . n G 2 3 DA 3 3 3 DA DA G . n G 2 4 DA 4 4 4 DA DA G . n G 2 5 DG 5 5 5 DG DG G . n G 2 6 DT 6 6 6 DT DT G . n G 2 7 DG 7 7 7 DG DG G . n G 2 8 DG 8 8 8 DG DG G . n G 2 9 DG 9 9 9 DG DG G . n G 2 10 DC 10 10 10 DC DC G . n G 2 11 DC 11 11 11 DC DC G . n G 2 12 DC 12 12 12 DC DC G . n G 2 13 DC 13 13 13 DC DC G . n G 2 14 DA 14 14 14 DA DA G . n G 2 15 DC 15 15 15 DC DC G . n G 2 16 DT 16 16 16 DT DT G . n G 2 17 DT 17 17 17 DT DT G . n G 2 18 DG 18 18 18 DG DG G . n G 2 19 DA 19 19 19 DA DA G . n H 3 1 DT 1 1 1 DT DT H . n H 3 2 DC 2 2 2 DC DC H . n H 3 3 DA 3 3 3 DA DA H . n H 3 4 DA 4 4 4 DA DA H . n H 3 5 DG 5 5 5 DG DG H . n H 3 6 DT 6 6 6 DT DT H . n H 3 7 DG 7 7 7 DG DG H . n H 3 8 DG 8 8 8 DG DG H . n H 3 9 DG 9 9 9 DG DG H . n H 3 10 DG 10 10 10 DG DG H . n H 3 11 DC 11 11 11 DC DC H . n H 3 12 DC 12 12 12 DC DC H . n H 3 13 DC 13 13 13 DC DC H . n H 3 14 DA 14 14 14 DA DA H . n H 3 15 DC 15 15 15 DC DC H . n H 3 16 DT 16 16 16 DT DT H . n H 3 17 DT 17 17 17 DT DT H . n H 3 18 DG 18 18 18 DG DG H . n H 3 19 DA 19 19 19 DA DA H . n # _pdbx_nonpoly_scheme.asym_id I _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id HOH _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id HOH _pdbx_nonpoly_scheme.auth_mon_id HOH _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_reference_DOI _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 2.1_6048 ? 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . ? 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . ? 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 98.751 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 36NB _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.361 _cell.length_a_esd ? _cell.length_b 118.431 _cell.length_b_esd ? _cell.length_c 57.360 _cell.length_c_esd ? _cell.volume 250846.294 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 36NB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 36NB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51 _exptl_crystal.description 'thin plate-like' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM MES pH 5.6, 20% (w/v) PEG 8000, 0.1 M (NH4)2SO4 and 0.01 M MgCl2' _exptl_crystal_grow.pdbx_pH_range 5-6 _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2008-09-18 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0809 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type X25 _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0809 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 79.52 _reflns.entry_id 36NB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.26 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7628 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.26 _reflns_shell.d_res_low 3.32 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 394 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.922 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 84.10 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 36NB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.26 _refine.ls_d_res_low 29.61 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7628 _refine.ls_number_reflns_R_free 367 _refine.ls_number_reflns_R_work 7261 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.51 _refine.ls_percent_reflns_R_free 4.81 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2254 _refine.ls_R_factor_R_free 0.2974 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2218 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 34.9941 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2818 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.26 _refine_hist.d_res_low 29.61 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 3498 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1951 _refine_hist.pdbx_number_atoms_nucleic_acid 1546 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0104 ? 3731 ? f_bond_d ? ? ? 'X-RAY DIFFRACTION' ? 1.2381 ? 5340 ? f_angle_d ? ? ? 'X-RAY DIFFRACTION' ? 0.0618 ? 570 ? f_chiral_restr ? ? ? 'X-RAY DIFFRACTION' ? 0.0107 ? 413 ? f_plane_restr ? ? ? 'X-RAY DIFFRACTION' ? 27.7062 ? 1596 ? f_dihedral_angle_d ? ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.ncs_model_details 1 'X-RAY DIFFRACTION' d_2 ens_1 1.1972621637046619 ? ? ? 'Torsion NCS' A A ? ? ? ? 2 'X-RAY DIFFRACTION' d_3 ens_1 1.114043856331434 ? ? ? 'Torsion NCS' A A ? ? ? ? 3 'X-RAY DIFFRACTION' d_4 ens_1 1.081148372150814 ? ? ? 'Torsion NCS' A A ? ? ? ? 4 'X-RAY DIFFRACTION' d_2 ens_2 0.856028682738847 ? ? ? 'Torsion NCS' E E ? ? ? ? 5 'X-RAY DIFFRACTION' d_3 ens_2 1.7263956441038828 ? ? ? 'Torsion NCS' E E ? ? ? ? 6 'X-RAY DIFFRACTION' d_4 ens_2 1.5539255123018723 ? ? ? 'Torsion NCS' E E ? ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.correlation_coeff_Fo_to_Fc _refine_ls_shell.correlation_coeff_Fo_to_Fc_free _refine_ls_shell.correlation_coeff_I_to_Fcsqd_work _refine_ls_shell.correlation_coeff_I_to_Fcsqd_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 3.26 3.73 . . 127 2420 98.38 . . . . 0.2352 . . . . . . . . . . . . . . . 0.3248 'X-RAY DIFFRACTION' 3.73 4.70 . . 125 2412 99.02 . . . . 0.2587 . . . . . . . . . . . . . . . 0.3370 'X-RAY DIFFRACTION' 4.70 29.61 . . 115 2429 98.15 . . . . 0.1979 . . . . . . . . . . . . . . . 0.2638 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given 0.5922331099259264 0.5663684360991138 -0.5731376257916668 0.5614881666993029 -0.8002387866988471 -0.21059183963157943 -0.5779195291423543 -0.1970905346621218 -0.7919370801916515 3.3786800506891947 39.128619512339775 42.319682311738575 ? 2 given -0.3370253912826403 -0.0444625924031985 -0.9404450879809891 -0.48434987378694494 0.8647532453789784 0.1326914630603467 0.8073531354948427 0.5002248519249237 -0.3129792519055127 29.6376038467548 35.99486110988055 65.927138664656 ? 3 given 0.4739525757098355 -0.06276325592207463 0.8783107250193817 -0.16863927749902866 -0.9854629537625849 0.020580593920661486 0.8642509763156866 -0.15787191158525232 -0.4776470553345854 -10.521282698920732 71.73641024048808 81.78232355603986 ? 4 given 0.5575564235274575 0.631966364810302 -0.5382837061733539 0.6375027378703448 -0.7412846957576811 -0.20996966219731927 -0.5317152375013185 -0.22608740253250353 -0.8161883315908296 -0.1981380187634274 37.851974039257314 44.26111223716326 ? 5 given 0.3860014348854022 -0.04587679305717127 0.9213567236012338 0.019929053983786513 -0.9981148520381885 -0.05804804000219456 0.9222828877701906 0.04076839461610597 -0.38435948398173214 -12.72820187362382 75.2564094303371 72.92790509441522 ? 6 given -0.3356500337021584 0.06247449500055574 -0.939912757839878 -0.6117465874077443 0.7442974848404575 0.26793164586354384 0.7163135958996723 0.6649196880335202 -0.2116049167545192 26.150198156777993 34.90357826272406 57.2297000474275 ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;(chain "A" and resid 166 through 217) ; ens_1 d_2 ;(chain "B" and resid 166 through 217) ; ens_1 d_3 ;(chain "C" and resid 166 through 217) ; ens_1 d_4 ;chain "D" ; ens_2 d_1 ;(chain "E" and (resid 1 through 9 or resid 11 through 19)) ; ens_2 d_2 ;(chain "F" and (resid 1 through 9 or resid 11 through 19)) ; ens_2 d_3 ;(chain "G" and (resid 1 through 9 or resid 11 through 19)) ; ens_2 d_4 ;(chain "H" and (resid 1 through 9 or resid 11 through 19)) ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 A VAL 4 . A LYS 55 . A VAL 166 A LYS 217 ? ? ens_1 d_2 1 B VAL 4 . B LYS 55 . B VAL 166 B LYS 217 ? ? ens_1 d_3 1 C VAL 4 . C LYS 55 . C VAL 166 C LYS 217 ? ? ens_1 d_4 1 D VAL 4 . D LYS 55 . D VAL 166 D LYS 217 ? ? ens_2 d_1 1 E DT 1 . E DA 3 . E DT 1 E DA 3 ? ? ens_2 d_2 1 F DT 1 . F DA 3 . F DT 1 F DA 3 ? ? ens_2 d_3 1 G DT 1 . G DA 3 . G DT 1 G DA 3 ? ? ens_2 d_4 1 H DT 1 . H DA 3 . H DT 1 H DA 3 ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details ens_1 ? ens_2 ? # loop_ _struct_ncs_ens_gen.ens_id _struct_ncs_ens_gen.dom_id_1 _struct_ncs_ens_gen.dom_id_2 _struct_ncs_ens_gen.oper_id ens_1 d_2 d_1 1 ens_1 d_3 d_1 2 ens_1 d_4 d_1 3 ens_2 d_2 d_1 4 ens_2 d_3 d_1 5 ens_2 d_4 d_1 6 # _struct.entry_id 36NB _struct.title 'Crystal structure of the NKX2-1 homeodomain bound to a palindromic DNA recognition sequence' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 36NB _struct_keywords.text 'NKX2-1, Homeodomain, NK2 element, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP NKX21_HUMAN P43699 ? 1 KRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKD 163 2 PDB 36NB 36NB ? 2 ? 1 3 PDB 36NB 36NB ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 36NB A 1 ? 60 ? P43699 163 ? 222 ? 163 222 2 1 36NB B 1 ? 60 ? P43699 163 ? 222 ? 163 222 3 1 36NB C 1 ? 60 ? P43699 163 ? 222 ? 163 222 4 1 36NB D 1 ? 60 ? P43699 163 ? 222 ? 163 222 5 2 36NB E 1 ? 19 ? 36NB 1 ? 19 ? 1 19 6 3 36NB F 1 ? 19 ? 36NB 1 ? 19 ? 1 19 7 2 36NB G 1 ? 19 ? 36NB 1 ? 19 ? 1 19 8 3 36NB H 1 ? 19 ? 36NB 1 ? 19 ? 1 19 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 author_defined_assembly ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,I 2 1 C,D,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? GLN A 21 ? SER A 169 GLN A 183 1 ? 15 HELX_P HELX_P2 AA2 SER A 25 ? HIS A 37 ? SER A 187 HIS A 199 1 ? 13 HELX_P HELX_P3 AA3 THR A 39 ? ALA A 58 ? THR A 201 ALA A 220 1 ? 20 HELX_P HELX_P4 AA4 SER B 7 ? GLN B 21 ? SER B 169 GLN B 183 1 ? 15 HELX_P HELX_P5 AA5 SER B 25 ? HIS B 37 ? SER B 187 HIS B 199 1 ? 13 HELX_P HELX_P6 AA6 THR B 39 ? ARG B 56 ? THR B 201 ARG B 218 1 ? 18 HELX_P HELX_P7 AA7 SER C 7 ? GLN C 21 ? SER C 169 GLN C 183 1 ? 15 HELX_P HELX_P8 AA8 SER C 25 ? HIS C 37 ? SER C 187 HIS C 199 1 ? 13 HELX_P HELX_P9 AA9 THR C 39 ? ARG C 56 ? THR C 201 ARG C 218 1 ? 18 HELX_P HELX_P10 AB1 SER D 7 ? GLN D 21 ? SER D 169 GLN D 183 1 ? 15 HELX_P HELX_P11 AB2 SER D 25 ? HIS D 37 ? SER D 187 HIS D 199 1 ? 13 HELX_P HELX_P12 AB3 THR D 39 ? LYS D 55 ? THR D 201 LYS D 217 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? E DT 1 N3 ? ? ? 1_555 F DA 19 N1 ? ? E DT 1 F DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? E DT 1 O4 ? ? ? 1_555 F DA 19 N6 ? ? E DT 1 F DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 18 N1 ? ? E DC 2 F DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 18 O6 ? ? E DC 2 F DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 18 N2 ? ? E DC 2 F DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 17 N3 ? ? E DA 3 F DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? E DA 3 N6 ? ? ? 1_555 F DT 17 O4 ? ? E DA 3 F DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 16 N3 ? ? E DA 4 F DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 16 O4 ? ? E DA 4 F DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? E DG 5 N1 ? ? ? 1_555 F DC 15 N3 ? ? E DG 5 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? E DG 5 N2 ? ? ? 1_555 F DC 15 O2 ? ? E DG 5 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? E DG 5 O6 ? ? ? 1_555 F DC 15 N4 ? ? E DG 5 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? E DT 6 N3 ? ? ? 1_555 F DA 14 N1 ? ? E DT 6 F DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? E DT 6 O4 ? ? ? 1_555 F DA 14 N6 ? ? E DT 6 F DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F DC 13 N3 ? ? E DG 7 F DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F DC 13 O2 ? ? E DG 7 F DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F DC 13 N4 ? ? E DG 7 F DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? E DG 8 N1 ? ? ? 1_555 F DC 12 N3 ? ? E DG 8 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? E DG 8 N2 ? ? ? 1_555 F DC 12 O2 ? ? E DG 8 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? E DG 8 O6 ? ? ? 1_555 F DC 12 N4 ? ? E DG 8 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? E DG 9 N1 ? ? ? 1_555 F DC 11 N3 ? ? E DG 9 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? E DG 9 N2 ? ? ? 1_555 F DC 11 O2 ? ? E DG 9 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? E DG 9 O6 ? ? ? 1_555 F DC 11 N4 ? ? E DG 9 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? E DC 10 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 10 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? E DC 10 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 10 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? E DC 10 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 10 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? E DC 11 N3 ? ? ? 1_555 F DG 9 N1 ? ? E DC 11 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? E DC 11 N4 ? ? ? 1_555 F DG 9 O6 ? ? E DC 11 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? E DC 11 O2 ? ? ? 1_555 F DG 9 N2 ? ? E DC 11 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? E DC 12 N3 ? ? ? 1_555 F DG 8 N1 ? ? E DC 12 F DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? E DC 12 N4 ? ? ? 1_555 F DG 8 O6 ? ? E DC 12 F DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? E DC 12 O2 ? ? ? 1_555 F DG 8 N2 ? ? E DC 12 F DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E DC 13 N3 ? ? ? 1_555 F DG 7 N1 ? ? E DC 13 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E DC 13 N4 ? ? ? 1_555 F DG 7 O6 ? ? E DC 13 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DC 13 O2 ? ? ? 1_555 F DG 7 N2 ? ? E DC 13 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DA 14 N1 ? ? ? 1_555 F DT 6 N3 ? ? E DA 14 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DA 14 N6 ? ? ? 1_555 F DT 6 O4 ? ? E DA 14 F DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DC 15 N3 ? ? ? 1_555 F DG 5 N1 ? ? E DC 15 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DC 15 N4 ? ? ? 1_555 F DG 5 O6 ? ? E DC 15 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DC 15 O2 ? ? ? 1_555 F DG 5 N2 ? ? E DC 15 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DT 16 N3 ? ? ? 1_555 F DA 4 N1 ? ? E DT 16 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DT 16 O4 ? ? ? 1_555 F DA 4 N6 ? ? E DT 16 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DT 17 N3 ? ? ? 1_555 F DA 3 N1 ? ? E DT 17 F DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DT 17 O4 ? ? ? 1_555 F DA 3 N6 ? ? E DT 17 F DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 18 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 18 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DG 18 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 18 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DG 18 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 18 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DA 19 N1 ? ? ? 1_555 F DT 1 N3 ? ? E DA 19 F DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DA 19 N6 ? ? ? 1_555 F DT 1 O4 ? ? E DA 19 F DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? G DT 1 N3 ? ? ? 1_555 H DA 19 N1 ? ? G DT 1 H DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? G DT 1 O4 ? ? ? 1_555 H DA 19 N6 ? ? G DT 1 H DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? G DC 2 N3 ? ? ? 1_555 H DG 18 N1 ? ? G DC 2 H DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? G DC 2 N4 ? ? ? 1_555 H DG 18 O6 ? ? G DC 2 H DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? G DC 2 O2 ? ? ? 1_555 H DG 18 N2 ? ? G DC 2 H DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? G DA 3 N1 ? ? ? 1_555 H DT 17 N3 ? ? G DA 3 H DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G DA 3 N6 ? ? ? 1_555 H DT 17 O4 ? ? G DA 3 H DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G DA 4 N1 ? ? ? 1_555 H DT 16 N3 ? ? G DA 4 H DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G DA 4 N6 ? ? ? 1_555 H DT 16 O4 ? ? G DA 4 H DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G DG 5 N1 ? ? ? 1_555 H DC 15 N3 ? ? G DG 5 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G DG 5 N2 ? ? ? 1_555 H DC 15 O2 ? ? G DG 5 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DG 5 O6 ? ? ? 1_555 H DC 15 N4 ? ? G DG 5 H DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G DT 6 N3 ? ? ? 1_555 H DA 14 N1 ? ? G DT 6 H DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G DT 6 O4 ? ? ? 1_555 H DA 14 N6 ? ? G DT 6 H DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G DG 7 N1 ? ? ? 1_555 H DC 13 N3 ? ? G DG 7 H DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? G DG 7 N2 ? ? ? 1_555 H DC 13 O2 ? ? G DG 7 H DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G DG 7 O6 ? ? ? 1_555 H DC 13 N4 ? ? G DG 7 H DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DG 8 N1 ? ? ? 1_555 H DC 12 N3 ? ? G DG 8 H DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DG 8 N2 ? ? ? 1_555 H DC 12 O2 ? ? G DG 8 H DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DG 8 O6 ? ? ? 1_555 H DC 12 N4 ? ? G DG 8 H DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G DG 9 N1 ? ? ? 1_555 H DC 11 N3 ? ? G DG 9 H DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G DG 9 N2 ? ? ? 1_555 H DC 11 O2 ? ? G DG 9 H DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G DG 9 O6 ? ? ? 1_555 H DC 11 N4 ? ? G DG 9 H DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? G DC 10 N3 ? ? ? 1_555 H DG 10 N1 ? ? G DC 10 H DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? G DC 10 N4 ? ? ? 1_555 H DG 10 O6 ? ? G DC 10 H DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? G DC 10 O2 ? ? ? 1_555 H DG 10 N2 ? ? G DC 10 H DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? G DC 11 N3 ? ? ? 1_555 H DG 9 N1 ? ? G DC 11 H DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? G DC 11 N4 ? ? ? 1_555 H DG 9 O6 ? ? G DC 11 H DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? G DC 11 O2 ? ? ? 1_555 H DG 9 N2 ? ? G DC 11 H DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? G DC 12 N3 ? ? ? 1_555 H DG 8 N1 ? ? G DC 12 H DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? G DC 12 N4 ? ? ? 1_555 H DG 8 O6 ? ? G DC 12 H DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? G DC 12 O2 ? ? ? 1_555 H DG 8 N2 ? ? G DC 12 H DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? G DC 13 N3 ? ? ? 1_555 H DG 7 N1 ? ? G DC 13 H DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? G DC 13 N4 ? ? ? 1_555 H DG 7 O6 ? ? G DC 13 H DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? G DC 13 O2 ? ? ? 1_555 H DG 7 N2 ? ? G DC 13 H DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? G DA 14 N1 ? ? ? 1_555 H DT 6 N3 ? ? G DA 14 H DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? G DA 14 N6 ? ? ? 1_555 H DT 6 O4 ? ? G DA 14 H DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? G DC 15 N3 ? ? ? 1_555 H DG 5 N1 ? ? G DC 15 H DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? G DC 15 N4 ? ? ? 1_555 H DG 5 O6 ? ? G DC 15 H DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? G DC 15 O2 ? ? ? 1_555 H DG 5 N2 ? ? G DC 15 H DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? G DT 16 N3 ? ? ? 1_555 H DA 4 N1 ? ? G DT 16 H DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? G DT 16 O4 ? ? ? 1_555 H DA 4 N6 ? ? G DT 16 H DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? G DT 17 N3 ? ? ? 1_555 H DA 3 N1 ? ? G DT 17 H DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? G DT 17 O4 ? ? ? 1_555 H DA 3 N6 ? ? G DT 17 H DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? G DG 18 N2 ? ? ? 1_555 H DC 2 O2 ? ? G DG 18 H DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog95 hydrog ? ? G DA 19 N1 ? ? ? 1_555 H DT 1 N3 ? ? G DA 19 H DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? G DA 19 N6 ? ? ? 1_555 H DT 1 O4 ? ? G DA 19 H DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 36NB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" E DC 13 ? ? "C3'" E DC 13 ? ? 1.380 1.419 -0.039 0.006 N 2 1 "O3'" G DT 17 ? ? "C3'" G DT 17 ? ? 1.376 1.419 -0.043 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" E DG 8 ? ? "C1'" E DG 8 ? ? N9 E DG 8 ? ? 112.60 108.30 4.30 0.30 N 2 1 "O4'" E DC 12 ? ? "C1'" E DC 12 ? ? N1 E DC 12 ? ? 110.33 108.30 2.03 0.30 N 3 1 "O5'" F DA 3 ? ? P F DA 3 ? ? OP2 F DA 3 ? ? 100.27 105.70 -5.43 0.90 N 4 1 "O4'" F DA 4 ? ? "C1'" F DA 4 ? ? N9 F DA 4 ? ? 110.46 108.30 2.16 0.30 N 5 1 "O4'" F DG 10 ? ? "C1'" F DG 10 ? ? N9 F DG 10 ? ? 111.38 108.30 3.08 0.30 N 6 1 "O4'" F DC 11 ? ? "C1'" F DC 11 ? ? N1 F DC 11 ? ? 110.61 108.30 2.31 0.30 N 7 1 "O4'" F DC 12 ? ? "C1'" F DC 12 ? ? N1 F DC 12 ? ? 110.75 108.30 2.45 0.30 N 8 1 "O5'" F DA 14 ? ? P F DA 14 ? ? OP1 F DA 14 ? ? 100.30 105.70 -5.40 0.90 N 9 1 "O4'" F DT 16 ? ? "C1'" F DT 16 ? ? N1 F DT 16 ? ? 110.98 108.30 2.68 0.30 N 10 1 "O4'" G DC 2 ? ? "C1'" G DC 2 ? ? N1 G DC 2 ? ? 110.18 108.30 1.88 0.30 N 11 1 "O4'" G DT 6 ? ? "C1'" G DT 6 ? ? N1 G DT 6 ? ? 110.66 108.30 2.36 0.30 N 12 1 "O4'" G DG 7 ? ? "C1'" G DG 7 ? ? N9 G DG 7 ? ? 110.52 108.30 2.22 0.30 N 13 1 "O4'" G DG 9 ? ? "C1'" G DG 9 ? ? N9 G DG 9 ? ? 110.86 108.30 2.56 0.30 N 14 1 "O4'" G DC 15 ? ? "C1'" G DC 15 ? ? N1 G DC 15 ? ? 110.80 108.30 2.50 0.30 N 15 1 "O4'" H DG 10 ? ? "C1'" H DG 10 ? ? N9 H DG 10 ? ? 111.29 108.30 2.99 0.30 N 16 1 "O4'" H DC 11 ? ? "C1'" H DC 11 ? ? N1 H DC 11 ? ? 112.20 108.30 3.90 0.30 N 17 1 "O4'" H DC 12 ? ? "C1'" H DC 12 ? ? N1 H DC 12 ? ? 110.26 108.30 1.96 0.30 N 18 1 "O4'" H DC 15 ? ? "C1'" H DC 15 ? ? N1 H DC 15 ? ? 111.04 108.30 2.74 0.30 N 19 1 "O4'" H DT 16 ? ? "C1'" H DT 16 ? ? N1 H DT 16 ? ? 110.50 108.30 2.20 0.30 N 20 1 "O4'" H DA 19 ? ? "C1'" H DA 19 ? ? N9 H DA 19 ? ? 103.55 108.00 -4.45 0.70 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B LYS 163 ? B LYS 1 2 1 Y 1 B ARG 164 ? B ARG 2 3 1 Y 1 B ALA 220 ? B ALA 58 4 1 Y 1 B LYS 221 ? B LYS 59 5 1 Y 1 B ASP 222 ? B ASP 60 6 1 Y 1 C LYS 163 ? C LYS 1 7 1 Y 1 C ARG 164 ? C ARG 2 8 1 Y 1 C ALA 220 ? C ALA 58 9 1 Y 1 C LYS 221 ? C LYS 59 10 1 Y 1 C ASP 222 ? C ASP 60 11 1 Y 1 D LYS 163 ? D LYS 1 12 1 Y 1 D ARG 164 ? D ARG 2 13 1 Y 1 D ARG 165 ? D ARG 3 14 1 Y 1 D ARG 218 ? D ARG 56 15 1 Y 1 D GLN 219 ? D GLN 57 16 1 Y 1 D ALA 220 ? D ALA 58 17 1 Y 1 D LYS 221 ? D LYS 59 18 1 Y 1 D ASP 222 ? D ASP 60 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 HIS N N N N 256 HIS CA C N S 257 HIS C C N N 258 HIS O O N N 259 HIS CB C N N 260 HIS CG C Y N 261 HIS ND1 N Y N 262 HIS CD2 C Y N 263 HIS CE1 C Y N 264 HIS NE2 N Y N 265 HIS OXT O N N 266 HIS H H N N 267 HIS H2 H N N 268 HIS HA H N N 269 HIS HB2 H N N 270 HIS HB3 H N N 271 HIS HD1 H N N 272 HIS HD2 H N N 273 HIS HE1 H N N 274 HIS HE2 H N N 275 HIS HXT H N N 276 HOH O O N N 277 HOH H1 H N N 278 HOH H2 H N N 279 ILE N N N N 280 ILE CA C N S 281 ILE C C N N 282 ILE O O N N 283 ILE CB C N S 284 ILE CG1 C N N 285 ILE CG2 C N N 286 ILE CD1 C N N 287 ILE OXT O N N 288 ILE H H N N 289 ILE H2 H N N 290 ILE HA H N N 291 ILE HB H N N 292 ILE HG12 H N N 293 ILE HG13 H N N 294 ILE HG21 H N N 295 ILE HG22 H N N 296 ILE HG23 H N N 297 ILE HD11 H N N 298 ILE HD12 H N N 299 ILE HD13 H N N 300 ILE HXT H N N 301 LEU N N N N 302 LEU CA C N S 303 LEU C C N N 304 LEU O O N N 305 LEU CB C N N 306 LEU CG C N N 307 LEU CD1 C N N 308 LEU CD2 C N N 309 LEU OXT O N N 310 LEU H H N N 311 LEU H2 H N N 312 LEU HA H N N 313 LEU HB2 H N N 314 LEU HB3 H N N 315 LEU HG H N N 316 LEU HD11 H N N 317 LEU HD12 H N N 318 LEU HD13 H N N 319 LEU HD21 H N N 320 LEU HD22 H N N 321 LEU HD23 H N N 322 LEU HXT H N N 323 LYS N N N N 324 LYS CA C N S 325 LYS C C N N 326 LYS O O N N 327 LYS CB C N N 328 LYS CG C N N 329 LYS CD C N N 330 LYS CE C N N 331 LYS NZ N N N 332 LYS OXT O N N 333 LYS H H N N 334 LYS H2 H N N 335 LYS HA H N N 336 LYS HB2 H N N 337 LYS HB3 H N N 338 LYS HG2 H N N 339 LYS HG3 H N N 340 LYS HD2 H N N 341 LYS HD3 H N N 342 LYS HE2 H N N 343 LYS HE3 H N N 344 LYS HZ1 H N N 345 LYS HZ2 H N N 346 LYS HZ3 H N N 347 LYS HXT H N N 348 MET N N N N 349 MET CA C N S 350 MET C C N N 351 MET O O N N 352 MET CB C N N 353 MET CG C N N 354 MET SD S N N 355 MET CE C N N 356 MET OXT O N N 357 MET H H N N 358 MET H2 H N N 359 MET HA H N N 360 MET HB2 H N N 361 MET HB3 H N N 362 MET HG2 H N N 363 MET HG3 H N N 364 MET HE1 H N N 365 MET HE2 H N N 366 MET HE3 H N N 367 MET HXT H N N 368 PHE N N N N 369 PHE CA C N S 370 PHE C C N N 371 PHE O O N N 372 PHE CB C N N 373 PHE CG C Y N 374 PHE CD1 C Y N 375 PHE CD2 C Y N 376 PHE CE1 C Y N 377 PHE CE2 C Y N 378 PHE CZ C Y N 379 PHE OXT O N N 380 PHE H H N N 381 PHE H2 H N N 382 PHE HA H N N 383 PHE HB2 H N N 384 PHE HB3 H N N 385 PHE HD1 H N N 386 PHE HD2 H N N 387 PHE HE1 H N N 388 PHE HE2 H N N 389 PHE HZ H N N 390 PHE HXT H N N 391 PRO N N N N 392 PRO CA C N S 393 PRO C C N N 394 PRO O O N N 395 PRO CB C N N 396 PRO CG C N N 397 PRO CD C N N 398 PRO OXT O N N 399 PRO H H N N 400 PRO HA H N N 401 PRO HB2 H N N 402 PRO HB3 H N N 403 PRO HG2 H N N 404 PRO HG3 H N N 405 PRO HD2 H N N 406 PRO HD3 H N N 407 PRO HXT H N N 408 SER N N N N 409 SER CA C N S 410 SER C C N N 411 SER O O N N 412 SER CB C N N 413 SER OG O N N 414 SER OXT O N N 415 SER H H N N 416 SER H2 H N N 417 SER HA H N N 418 SER HB2 H N N 419 SER HB3 H N N 420 SER HG H N N 421 SER HXT H N N 422 THR N N N N 423 THR CA C N S 424 THR C C N N 425 THR O O N N 426 THR CB C N R 427 THR OG1 O N N 428 THR CG2 C N N 429 THR OXT O N N 430 THR H H N N 431 THR H2 H N N 432 THR HA H N N 433 THR HB H N N 434 THR HG1 H N N 435 THR HG21 H N N 436 THR HG22 H N N 437 THR HG23 H N N 438 THR HXT H N N 439 TRP N N N N 440 TRP CA C N S 441 TRP C C N N 442 TRP O O N N 443 TRP CB C N N 444 TRP CG C Y N 445 TRP CD1 C Y N 446 TRP CD2 C Y N 447 TRP NE1 N Y N 448 TRP CE2 C Y N 449 TRP CE3 C Y N 450 TRP CZ2 C Y N 451 TRP CZ3 C Y N 452 TRP CH2 C Y N 453 TRP OXT O N N 454 TRP H H N N 455 TRP H2 H N N 456 TRP HA H N N 457 TRP HB2 H N N 458 TRP HB3 H N N 459 TRP HD1 H N N 460 TRP HE1 H N N 461 TRP HE3 H N N 462 TRP HZ2 H N N 463 TRP HZ3 H N N 464 TRP HH2 H N N 465 TRP HXT H N N 466 TYR N N N N 467 TYR CA C N S 468 TYR C C N N 469 TYR O O N N 470 TYR CB C N N 471 TYR CG C Y N 472 TYR CD1 C Y N 473 TYR CD2 C Y N 474 TYR CE1 C Y N 475 TYR CE2 C Y N 476 TYR CZ C Y N 477 TYR OH O N N 478 TYR OXT O N N 479 TYR H H N N 480 TYR H2 H N N 481 TYR HA H N N 482 TYR HB2 H N N 483 TYR HB3 H N N 484 TYR HD1 H N N 485 TYR HD2 H N N 486 TYR HE1 H N N 487 TYR HE2 H N N 488 TYR HH H N N 489 TYR HXT H N N 490 VAL N N N N 491 VAL CA C N S 492 VAL C C N N 493 VAL O O N N 494 VAL CB C N N 495 VAL CG1 C N N 496 VAL CG2 C N N 497 VAL OXT O N N 498 VAL H H N N 499 VAL H2 H N N 500 VAL HA H N N 501 VAL HB H N N 502 VAL HG11 H N N 503 VAL HG12 H N N 504 VAL HG13 H N N 505 VAL HG21 H N N 506 VAL HG22 H N N 507 VAL HG23 H N N 508 VAL HXT H N N 509 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 HIS N CA sing N N 256 HIS N H sing N N 257 HIS N H2 sing N N 258 HIS CA C sing N N 259 HIS CA CB sing N N 260 HIS CA HA sing N N 261 HIS C O doub N N 262 HIS C OXT sing N N 263 HIS CB CG sing N N 264 HIS CB HB2 sing N N 265 HIS CB HB3 sing N N 266 HIS CG ND1 sing Y N 267 HIS CG CD2 doub Y N 268 HIS ND1 CE1 doub Y N 269 HIS ND1 HD1 sing N N 270 HIS CD2 NE2 sing Y N 271 HIS CD2 HD2 sing N N 272 HIS CE1 NE2 sing Y N 273 HIS CE1 HE1 sing N N 274 HIS NE2 HE2 sing N N 275 HIS OXT HXT sing N N 276 HOH O H1 sing N N 277 HOH O H2 sing N N 278 ILE N CA sing N N 279 ILE N H sing N N 280 ILE N H2 sing N N 281 ILE CA C sing N N 282 ILE CA CB sing N N 283 ILE CA HA sing N N 284 ILE C O doub N N 285 ILE C OXT sing N N 286 ILE CB CG1 sing N N 287 ILE CB CG2 sing N N 288 ILE CB HB sing N N 289 ILE CG1 CD1 sing N N 290 ILE CG1 HG12 sing N N 291 ILE CG1 HG13 sing N N 292 ILE CG2 HG21 sing N N 293 ILE CG2 HG22 sing N N 294 ILE CG2 HG23 sing N N 295 ILE CD1 HD11 sing N N 296 ILE CD1 HD12 sing N N 297 ILE CD1 HD13 sing N N 298 ILE OXT HXT sing N N 299 LEU N CA sing N N 300 LEU N H sing N N 301 LEU N H2 sing N N 302 LEU CA C sing N N 303 LEU CA CB sing N N 304 LEU CA HA sing N N 305 LEU C O doub N N 306 LEU C OXT sing N N 307 LEU CB CG sing N N 308 LEU CB HB2 sing N N 309 LEU CB HB3 sing N N 310 LEU CG CD1 sing N N 311 LEU CG CD2 sing N N 312 LEU CG HG sing N N 313 LEU CD1 HD11 sing N N 314 LEU CD1 HD12 sing N N 315 LEU CD1 HD13 sing N N 316 LEU CD2 HD21 sing N N 317 LEU CD2 HD22 sing N N 318 LEU CD2 HD23 sing N N 319 LEU OXT HXT sing N N 320 LYS N CA sing N N 321 LYS N H sing N N 322 LYS N H2 sing N N 323 LYS CA C sing N N 324 LYS CA CB sing N N 325 LYS CA HA sing N N 326 LYS C O doub N N 327 LYS C OXT sing N N 328 LYS CB CG sing N N 329 LYS CB HB2 sing N N 330 LYS CB HB3 sing N N 331 LYS CG CD sing N N 332 LYS CG HG2 sing N N 333 LYS CG HG3 sing N N 334 LYS CD CE sing N N 335 LYS CD HD2 sing N N 336 LYS CD HD3 sing N N 337 LYS CE NZ sing N N 338 LYS CE HE2 sing N N 339 LYS CE HE3 sing N N 340 LYS NZ HZ1 sing N N 341 LYS NZ HZ2 sing N N 342 LYS NZ HZ3 sing N N 343 LYS OXT HXT sing N N 344 MET N CA sing N N 345 MET N H sing N N 346 MET N H2 sing N N 347 MET CA C sing N N 348 MET CA CB sing N N 349 MET CA HA sing N N 350 MET C O doub N N 351 MET C OXT sing N N 352 MET CB CG sing N N 353 MET CB HB2 sing N N 354 MET CB HB3 sing N N 355 MET CG SD sing N N 356 MET CG HG2 sing N N 357 MET CG HG3 sing N N 358 MET SD CE sing N N 359 MET CE HE1 sing N N 360 MET CE HE2 sing N N 361 MET CE HE3 sing N N 362 MET OXT HXT sing N N 363 PHE N CA sing N N 364 PHE N H sing N N 365 PHE N H2 sing N N 366 PHE CA C sing N N 367 PHE CA CB sing N N 368 PHE CA HA sing N N 369 PHE C O doub N N 370 PHE C OXT sing N N 371 PHE CB CG sing N N 372 PHE CB HB2 sing N N 373 PHE CB HB3 sing N N 374 PHE CG CD1 doub Y N 375 PHE CG CD2 sing Y N 376 PHE CD1 CE1 sing Y N 377 PHE CD1 HD1 sing N N 378 PHE CD2 CE2 doub Y N 379 PHE CD2 HD2 sing N N 380 PHE CE1 CZ doub Y N 381 PHE CE1 HE1 sing N N 382 PHE CE2 CZ sing Y N 383 PHE CE2 HE2 sing N N 384 PHE CZ HZ sing N N 385 PHE OXT HXT sing N N 386 PRO N CA sing N N 387 PRO N CD sing N N 388 PRO N H sing N N 389 PRO CA C sing N N 390 PRO CA CB sing N N 391 PRO CA HA sing N N 392 PRO C O doub N N 393 PRO C OXT sing N N 394 PRO CB CG sing N N 395 PRO CB HB2 sing N N 396 PRO CB HB3 sing N N 397 PRO CG CD sing N N 398 PRO CG HG2 sing N N 399 PRO CG HG3 sing N N 400 PRO CD HD2 sing N N 401 PRO CD HD3 sing N N 402 PRO OXT HXT sing N N 403 SER N CA sing N N 404 SER N H sing N N 405 SER N H2 sing N N 406 SER CA C sing N N 407 SER CA CB sing N N 408 SER CA HA sing N N 409 SER C O doub N N 410 SER C OXT sing N N 411 SER CB OG sing N N 412 SER CB HB2 sing N N 413 SER CB HB3 sing N N 414 SER OG HG sing N N 415 SER OXT HXT sing N N 416 THR N CA sing N N 417 THR N H sing N N 418 THR N H2 sing N N 419 THR CA C sing N N 420 THR CA CB sing N N 421 THR CA HA sing N N 422 THR C O doub N N 423 THR C OXT sing N N 424 THR CB OG1 sing N N 425 THR CB CG2 sing N N 426 THR CB HB sing N N 427 THR OG1 HG1 sing N N 428 THR CG2 HG21 sing N N 429 THR CG2 HG22 sing N N 430 THR CG2 HG23 sing N N 431 THR OXT HXT sing N N 432 TRP N CA sing N N 433 TRP N H sing N N 434 TRP N H2 sing N N 435 TRP CA C sing N N 436 TRP CA CB sing N N 437 TRP CA HA sing N N 438 TRP C O doub N N 439 TRP C OXT sing N N 440 TRP CB CG sing N N 441 TRP CB HB2 sing N N 442 TRP CB HB3 sing N N 443 TRP CG CD1 doub Y N 444 TRP CG CD2 sing Y N 445 TRP CD1 NE1 sing Y N 446 TRP CD1 HD1 sing N N 447 TRP CD2 CE2 doub Y N 448 TRP CD2 CE3 sing Y N 449 TRP NE1 CE2 sing Y N 450 TRP NE1 HE1 sing N N 451 TRP CE2 CZ2 sing Y N 452 TRP CE3 CZ3 doub Y N 453 TRP CE3 HE3 sing N N 454 TRP CZ2 CH2 doub Y N 455 TRP CZ2 HZ2 sing N N 456 TRP CZ3 CH2 sing Y N 457 TRP CZ3 HZ3 sing N N 458 TRP CH2 HH2 sing N N 459 TRP OXT HXT sing N N 460 TYR N CA sing N N 461 TYR N H sing N N 462 TYR N H2 sing N N 463 TYR CA C sing N N 464 TYR CA CB sing N N 465 TYR CA HA sing N N 466 TYR C O doub N N 467 TYR C OXT sing N N 468 TYR CB CG sing N N 469 TYR CB HB2 sing N N 470 TYR CB HB3 sing N N 471 TYR CG CD1 doub Y N 472 TYR CG CD2 sing Y N 473 TYR CD1 CE1 sing Y N 474 TYR CD1 HD1 sing N N 475 TYR CD2 CE2 doub Y N 476 TYR CD2 HD2 sing N N 477 TYR CE1 CZ doub Y N 478 TYR CE1 HE1 sing N N 479 TYR CE2 CZ sing Y N 480 TYR CE2 HE2 sing N N 481 TYR CZ OH sing N N 482 TYR OH HH sing N N 483 TYR OXT HXT sing N N 484 VAL N CA sing N N 485 VAL N H sing N N 486 VAL N H2 sing N N 487 VAL CA C sing N N 488 VAL CA CB sing N N 489 VAL CA HA sing N N 490 VAL C O doub N N 491 VAL C OXT sing N N 492 VAL CB CG1 sing N N 493 VAL CB CG2 sing N N 494 VAL CB HB sing N N 495 VAL CG1 HG11 sing N N 496 VAL CG1 HG12 sing N N 497 VAL CG1 HG13 sing N N 498 VAL CG2 HG21 sing N N 499 VAL CG2 HG22 sing N N 500 VAL CG2 HG23 sing N N 501 VAL OXT HXT sing N N 502 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 36NB 'double helix' 36NB 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 E DT 1 1_555 F DA 19 1_555 0.723 -0.860 -1.212 3.150 -9.739 4.430 1 E_DT1:DA19_F E 1 ? F 19 ? 20 1 1 E DC 2 1_555 F DG 18 1_555 -0.215 -0.292 -1.036 15.734 4.375 -3.296 2 E_DC2:DG18_F E 2 ? F 18 ? 19 1 1 E DA 3 1_555 F DT 17 1_555 -0.892 -0.459 -2.271 -5.516 -32.068 -9.084 3 E_DA3:DT17_F E 3 ? F 17 ? 20 1 1 E DA 4 1_555 F DT 16 1_555 0.294 -0.028 -0.577 -5.374 -15.202 -0.047 4 E_DA4:DT16_F E 4 ? F 16 ? 20 1 1 E DG 5 1_555 F DC 15 1_555 -1.174 -0.463 -0.079 -14.722 -13.045 0.599 5 E_DG5:DC15_F E 5 ? F 15 ? 19 1 1 E DT 6 1_555 F DA 14 1_555 1.014 -0.578 0.299 -1.055 6.680 0.720 6 E_DT6:DA14_F E 6 ? F 14 ? 20 1 1 E DG 7 1_555 F DC 13 1_555 0.914 -0.146 0.008 12.782 -9.368 5.922 7 E_DG7:DC13_F E 7 ? F 13 ? 19 1 1 E DG 8 1_555 F DC 12 1_555 -1.015 -0.544 0.254 8.773 -12.203 -6.650 8 E_DG8:DC12_F E 8 ? F 12 ? 19 1 1 E DG 9 1_555 F DC 11 1_555 -0.883 -0.151 0.954 0.378 -11.677 2.478 9 E_DG9:DC11_F E 9 ? F 11 ? 19 1 1 E DC 10 1_555 F DG 10 1_555 0.286 -0.149 0.244 3.751 3.088 0.704 10 E_DC10:DG10_F E 10 ? F 10 ? 19 1 1 E DC 11 1_555 F DG 9 1_555 0.326 -0.116 -0.797 11.950 -16.608 6.303 11 E_DC11:DG9_F E 11 ? F 9 ? 19 1 1 E DC 12 1_555 F DG 8 1_555 0.306 -0.034 -0.251 -5.166 -6.919 2.413 12 E_DC12:DG8_F E 12 ? F 8 ? 19 1 1 E DC 13 1_555 F DG 7 1_555 -0.398 0.160 -0.534 5.697 3.693 2.411 13 E_DC13:DG7_F E 13 ? F 7 ? 19 1 1 E DA 14 1_555 F DT 6 1_555 -0.181 -0.244 0.220 -2.207 -2.987 4.521 14 E_DA14:DT6_F E 14 ? F 6 ? 20 1 1 E DC 15 1_555 F DG 5 1_555 0.525 -0.217 0.401 3.087 -1.835 0.346 15 E_DC15:DG5_F E 15 ? F 5 ? 19 1 1 E DT 16 1_555 F DA 4 1_555 0.306 -0.212 0.595 -5.524 -11.781 -0.627 16 E_DT16:DA4_F E 16 ? F 4 ? 20 1 1 E DT 17 1_555 F DA 3 1_555 0.522 -0.049 0.277 3.908 -14.471 2.452 17 E_DT17:DA3_F E 17 ? F 3 ? 20 1 1 E DG 18 1_555 F DC 2 1_555 -0.651 0.048 0.432 5.788 3.522 0.206 18 E_DG18:DC2_F E 18 ? F 2 ? 19 1 1 E DA 19 1_555 F DT 1 1_555 1.078 0.025 0.671 17.157 -7.632 6.696 19 E_DA19:DT1_F E 19 ? F 1 ? 20 1 1 G DT 1 1_555 H DA 19 1_555 -0.929 0.046 0.303 -25.756 -4.496 0.012 20 G_DT1:DA19_H G 1 ? H 19 ? 20 1 1 G DC 2 1_555 H DG 18 1_555 0.915 -0.430 0.182 -8.282 10.405 -11.680 21 G_DC2:DG18_H G 2 ? H 18 ? 19 1 1 G DA 3 1_555 H DT 17 1_555 -0.096 -0.224 0.548 11.640 -13.032 2.251 22 G_DA3:DT17_H G 3 ? H 17 ? 20 1 1 G DA 4 1_555 H DT 16 1_555 0.723 0.209 0.240 6.206 -12.998 -5.508 23 G_DA4:DT16_H G 4 ? H 16 ? 20 1 1 G DG 5 1_555 H DC 15 1_555 0.239 0.202 -0.020 -15.758 -17.668 -1.900 24 G_DG5:DC15_H G 5 ? H 15 ? 19 1 1 G DT 6 1_555 H DA 14 1_555 0.500 -0.170 0.063 -5.576 -10.559 3.331 25 G_DT6:DA14_H G 6 ? H 14 ? 20 1 1 G DG 7 1_555 H DC 13 1_555 0.377 -0.190 0.123 0.887 -2.440 -2.514 26 G_DG7:DC13_H G 7 ? H 13 ? 19 1 1 G DG 8 1_555 H DC 12 1_555 0.478 -0.150 0.299 1.222 -16.329 2.310 27 G_DG8:DC12_H G 8 ? H 12 ? 19 1 1 G DG 9 1_555 H DC 11 1_555 -0.896 -0.593 1.290 4.718 -10.326 -4.736 28 G_DG9:DC11_H G 9 ? H 11 ? 19 1 1 G DC 10 1_555 H DG 10 1_555 0.950 -0.673 0.803 -7.468 5.488 1.413 29 G_DC10:DG10_H G 10 ? H 10 ? 19 1 1 G DC 11 1_555 H DG 9 1_555 0.309 -0.073 0.003 2.866 -22.272 5.735 30 G_DC11:DG9_H G 11 ? H 9 ? 19 1 1 G DC 12 1_555 H DG 8 1_555 0.986 -0.269 0.333 -8.505 -22.674 -2.033 31 G_DC12:DG8_H G 12 ? H 8 ? 19 1 1 G DC 13 1_555 H DG 7 1_555 0.320 -0.247 0.033 -1.826 -6.455 1.933 32 G_DC13:DG7_H G 13 ? H 7 ? 19 1 1 G DA 14 1_555 H DT 6 1_555 0.042 -0.285 -0.575 -5.553 -2.111 0.495 33 G_DA14:DT6_H G 14 ? H 6 ? 20 1 1 G DC 15 1_555 H DG 5 1_555 -0.092 -0.168 0.094 1.059 -0.778 -0.627 34 G_DC15:DG5_H G 15 ? H 5 ? 19 1 1 G DT 16 1_555 H DA 4 1_555 -0.946 -0.022 0.142 -7.860 -9.662 -0.692 35 G_DT16:DA4_H G 16 ? H 4 ? 20 1 1 G DT 17 1_555 H DA 3 1_555 0.004 -0.045 0.490 -14.211 -17.938 3.883 36 G_DT17:DA3_H G 17 ? H 3 ? 20 1 1 G DG 18 1_555 H DC 2 1_555 0.836 0.766 -0.031 -7.395 -2.505 11.895 37 G_DG18:DC2_H G 18 ? H 2 ? ? 1 1 G DA 19 1_555 H DT 1 1_555 0.482 -0.157 0.540 8.100 -1.600 0.710 38 G_DA19:DT1_H G 19 ? H 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 E DT 1 1_555 F DA 19 1_555 E DC 2 1_555 F DG 18 1_555 0.421 0.037 3.332 -0.611 3.503 21.983 -1.243 -1.324 3.285 9.110 1.589 22.265 1 EE_DT1DC2:DG18DA19_FF E 1 ? F 19 ? E 2 ? F 18 ? 1 E DC 2 1_555 F DG 18 1_555 E DA 3 1_555 F DT 17 1_555 -0.317 1.761 4.268 6.042 14.627 38.301 0.296 1.357 4.523 21.222 -8.766 41.328 2 EE_DC2DA3:DT17DG18_FF E 2 ? F 18 ? E 3 ? F 17 ? 1 E DA 3 1_555 F DT 17 1_555 E DA 4 1_555 F DT 16 1_555 0.866 0.023 3.232 -8.670 -1.190 37.804 0.174 -2.322 2.967 -1.807 13.167 38.767 3 EE_DA3DA4:DT16DT17_FF E 3 ? F 17 ? E 4 ? F 16 ? 1 E DA 4 1_555 F DT 16 1_555 E DG 5 1_555 F DC 15 1_555 -0.512 -0.947 3.331 -4.728 2.378 27.608 -2.521 -0.079 3.279 4.925 9.793 28.101 4 EE_DA4DG5:DC15DT16_FF E 4 ? F 16 ? E 5 ? F 15 ? 1 E DG 5 1_555 F DC 15 1_555 E DT 6 1_555 F DA 14 1_555 -0.457 -0.538 3.010 -3.167 2.748 38.048 -1.139 0.331 2.993 4.200 4.839 38.270 5 EE_DG5DT6:DA14DC15_FF E 5 ? F 15 ? E 6 ? F 14 ? 1 E DT 6 1_555 F DA 14 1_555 E DG 7 1_555 F DC 13 1_555 0.223 0.205 2.993 10.380 2.312 32.187 0.005 1.172 2.929 4.036 -18.115 33.854 6 EE_DT6DG7:DC13DA14_FF E 6 ? F 14 ? E 7 ? F 13 ? 1 E DG 7 1_555 F DC 13 1_555 E DG 8 1_555 F DC 12 1_555 -0.549 -0.692 3.220 -7.884 17.332 22.806 -4.825 -0.506 2.234 36.690 16.689 29.629 7 EE_DG7DG8:DC12DC13_FF E 7 ? F 13 ? E 8 ? F 12 ? 1 E DG 8 1_555 F DC 12 1_555 E DG 9 1_555 F DC 11 1_555 0.107 -0.963 3.167 -7.742 -1.114 37.567 -1.331 -1.103 3.112 -1.707 11.864 38.344 8 EE_DG8DG9:DC11DC12_FF E 8 ? F 12 ? E 9 ? F 11 ? 1 E DG 9 1_555 F DC 11 1_555 E DC 10 1_555 F DG 10 1_555 0.170 -0.724 3.254 4.897 0.678 36.815 -1.227 0.385 3.236 1.068 -7.711 37.134 9 EE_DG9DC10:DG10DC11_FF E 9 ? F 11 ? E 10 ? F 10 ? 1 E DC 10 1_555 F DG 10 1_555 E DC 11 1_555 F DG 9 1_555 0.737 -1.021 3.042 7.049 -1.687 23.333 -1.902 0.401 3.188 -4.048 -16.913 24.418 10 EE_DC10DC11:DG9DG10_FF E 10 ? F 10 ? E 11 ? F 9 ? 1 E DC 11 1_555 F DG 9 1_555 E DC 12 1_555 F DG 8 1_555 0.060 0.069 3.637 0.140 15.947 37.157 -1.920 -0.070 3.388 23.731 -0.208 40.323 11 EE_DC11DC12:DG8DG9_FF E 11 ? F 9 ? E 12 ? F 8 ? 1 E DC 12 1_555 F DG 8 1_555 E DC 13 1_555 F DG 7 1_555 0.403 -0.117 2.986 2.772 6.947 35.650 -1.071 -0.293 2.935 11.194 -4.467 36.401 12 EE_DC12DC13:DG7DG8_FF E 12 ? F 8 ? E 13 ? F 7 ? 1 E DC 13 1_555 F DG 7 1_555 E DA 14 1_555 F DT 6 1_555 -0.082 -0.567 3.483 -6.327 5.675 28.747 -2.331 -1.217 3.257 11.127 12.405 29.952 13 EE_DC13DA14:DT6DG7_FF E 13 ? F 7 ? E 14 ? F 6 ? 1 E DA 14 1_555 F DT 6 1_555 E DC 15 1_555 F DG 5 1_555 0.102 -0.754 3.173 1.339 1.740 33.897 -1.560 0.032 3.133 2.980 -2.293 33.966 14 EE_DA14DC15:DG5DT6_FF E 14 ? F 6 ? E 15 ? F 5 ? 1 E DC 15 1_555 F DG 5 1_555 E DT 16 1_555 F DA 4 1_555 0.390 -0.810 3.252 2.647 1.771 35.302 -1.588 -0.255 3.229 2.913 -4.353 35.441 15 EE_DC15DT16:DA4DG5_FF E 15 ? F 5 ? E 16 ? F 4 ? 1 E DT 16 1_555 F DA 4 1_555 E DT 17 1_555 F DA 3 1_555 -0.282 -0.385 3.161 4.410 -2.061 32.903 -0.341 1.204 3.115 -3.614 -7.734 33.251 16 EE_DT16DT17:DA3DA4_FF E 16 ? F 4 ? E 17 ? F 3 ? 1 E DT 17 1_555 F DA 3 1_555 E DG 18 1_555 F DC 2 1_555 0.164 2.063 3.329 2.522 -7.918 38.025 4.020 0.047 2.864 -11.978 -3.815 38.890 17 EE_DT17DG18:DC2DA3_FF E 17 ? F 3 ? E 18 ? F 2 ? 1 E DG 18 1_555 F DC 2 1_555 E DA 19 1_555 F DT 1 1_555 0.001 1.009 3.259 0.865 4.831 40.156 0.910 0.097 3.353 7.004 -1.254 40.443 18 EE_DG18DA19:DT1DC2_FF E 18 ? F 2 ? E 19 ? F 1 ? 1 G DT 1 1_555 H DA 19 1_555 G DC 2 1_555 H DG 18 1_555 0.069 0.557 3.056 -0.650 0.146 40.669 0.787 -0.167 3.056 0.211 0.935 40.674 19 GG_DT1DC2:DG18DA19_HH G 1 ? H 19 ? G 2 ? H 18 ? 1 G DC 2 1_555 H DG 18 1_555 G DA 3 1_555 H DT 17 1_555 -0.518 1.302 2.991 -4.738 -4.181 30.161 3.186 0.143 2.835 -7.926 8.981 30.801 20 GG_DC2DA3:DT17DG18_HH G 2 ? H 18 ? G 3 ? H 17 ? 1 G DA 3 1_555 H DT 17 1_555 G DA 4 1_555 H DT 16 1_555 0.059 -0.962 3.438 -0.933 -1.624 37.010 -1.283 -0.225 3.473 -2.557 1.469 37.055 21 GG_DA3DA4:DT16DT17_HH G 3 ? H 17 ? G 4 ? H 16 ? 1 G DA 4 1_555 H DT 16 1_555 G DG 5 1_555 H DC 15 1_555 -0.244 -0.854 3.782 -1.117 1.611 35.251 -1.683 0.212 3.746 2.658 1.843 35.304 22 GG_DA4DG5:DC15DT16_HH G 4 ? H 16 ? G 5 ? H 15 ? 1 G DG 5 1_555 H DC 15 1_555 G DT 6 1_555 H DA 14 1_555 -0.137 -0.786 3.131 -0.527 -2.600 27.005 -1.040 0.162 3.193 -5.552 1.125 27.133 23 GG_DG5DT6:DA14DC15_HH G 5 ? H 15 ? G 6 ? H 14 ? 1 G DT 6 1_555 H DA 14 1_555 G DG 7 1_555 H DC 13 1_555 0.256 -0.367 3.080 1.680 3.709 31.612 -1.302 -0.180 3.028 6.773 -3.068 31.867 24 GG_DT6DG7:DC13DA14_HH G 6 ? H 14 ? G 7 ? H 13 ? 1 G DG 7 1_555 H DC 13 1_555 G DG 8 1_555 H DC 12 1_555 0.336 -0.306 3.218 0.996 11.787 37.532 -1.822 -0.385 2.999 17.787 -1.503 39.288 25 GG_DG7DG8:DC12DC13_HH G 7 ? H 13 ? G 8 ? H 12 ? 1 G DG 8 1_555 H DC 12 1_555 G DG 9 1_555 H DC 11 1_555 -0.205 -1.042 2.894 -7.619 -5.135 29.461 -1.039 -0.982 2.988 -9.802 14.543 30.830 26 GG_DG8DG9:DC11DC12_HH G 8 ? H 12 ? G 9 ? H 11 ? 1 G DG 9 1_555 H DC 11 1_555 G DC 10 1_555 H DG 10 1_555 0.815 -0.445 3.836 3.660 -1.700 41.664 -0.412 -0.688 3.905 -2.383 -5.131 41.850 27 GG_DG9DC10:DG10DC11_HH G 9 ? H 11 ? G 10 ? H 10 ? 1 G DC 10 1_555 H DG 10 1_555 G DC 11 1_555 H DG 9 1_555 -0.306 -0.925 3.095 7.939 -2.541 25.415 -1.375 2.617 2.943 -5.586 -17.455 26.726 28 GG_DC10DC11:DG9DG10_HH G 10 ? H 10 ? G 11 ? H 9 ? 1 G DC 11 1_555 H DG 9 1_555 G DC 12 1_555 H DG 8 1_555 0.035 -0.069 3.459 0.056 11.457 45.512 -1.091 -0.039 3.349 14.539 -0.071 46.858 29 GG_DC11DC12:DG8DG9_HH G 11 ? H 9 ? G 12 ? H 8 ? 1 G DC 12 1_555 H DG 8 1_555 G DC 13 1_555 H DG 7 1_555 0.378 -0.082 3.176 5.582 4.382 29.612 -1.015 0.374 3.148 8.422 -10.728 30.432 30 GG_DC12DC13:DG7DG8_HH G 12 ? H 8 ? G 13 ? H 7 ? 1 G DC 13 1_555 H DG 7 1_555 G DA 14 1_555 H DT 6 1_555 -0.491 -0.592 3.317 -0.943 10.530 28.756 -3.178 0.746 2.937 20.353 1.822 30.599 31 GG_DC13DA14:DT6DG7_HH G 13 ? H 7 ? G 14 ? H 6 ? 1 G DA 14 1_555 H DT 6 1_555 G DC 15 1_555 H DG 5 1_555 0.560 -0.764 3.248 -5.393 8.684 27.943 -3.212 -2.160 2.739 17.269 10.724 29.719 32 GG_DA14DC15:DG5DT6_HH G 14 ? H 6 ? G 15 ? H 5 ? 1 G DC 15 1_555 H DG 5 1_555 G DT 16 1_555 H DA 4 1_555 -0.201 -0.769 3.591 1.339 1.048 35.974 -1.407 0.533 3.558 1.695 -2.166 36.013 33 GG_DC15DT16:DA4DG5_HH G 15 ? H 5 ? G 16 ? H 4 ? 1 G DT 16 1_555 H DA 4 1_555 G DT 17 1_555 H DA 3 1_555 0.012 -0.701 3.583 1.024 -2.362 35.151 -0.772 0.148 3.620 -3.905 -1.693 35.242 34 GG_DT16DT17:DA3DA4_HH G 16 ? H 4 ? G 17 ? H 3 ? 1 G DT 17 1_555 H DA 3 1_555 G DG 18 1_555 H DC 2 1_555 0.791 2.281 3.367 2.427 -5.638 41.984 3.722 -0.849 3.089 -7.819 -3.365 42.410 35 GG_DT17DG18:DC2DA3_HH G 17 ? H 3 ? G 18 ? H 2 ? 1 G DG 18 1_555 H DC 2 1_555 G DA 19 1_555 H DT 1 1_555 -1.031 0.349 2.838 -3.602 3.767 29.650 -0.016 1.327 2.961 7.290 6.971 30.095 36 GG_DG18DA19:DT1DC2_HH G 18 ? H 2 ? G 19 ? H 1 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'in silico model' AlphaFold ? ? 2 ? 'experimental model' PDB 3RKQ ? # _space_group.crystal_system monoclinic _space_group.IT_number 4 _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.id 1 # _atom_sites.entry_id 36NB _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.026766 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004120 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008444 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017639 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ #