HEADER DNA BINDING PROTEIN 24-JUN-26 36OT TITLE ISORETICULAR CO-CRYSTAL 1 WITH ASYMMETRICAL EXPANDED DUPLEX (31MER) TITLE 2 CONTAINING INSERT SEQUENCE GACGGCCCG WITH UNPAIRED POLY-C TAIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (31-MER); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (32-MER); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: REPLICATION INITIATION PROTEIN; COMPND 11 CHAIN: C; COMPND 12 SYNONYM: PROTEIN E,PROTEIN REP,PROTEIN F4; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 4 ORGANISM_TAXID: 562; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 8 ORGANISM_TAXID: 562; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562; SOURCE 12 GENE: REPE, E, REP, ECOK12F045; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DNA BINDING PROTEIN, COCRYSTAL, SSDNA TAIL EXPDTA X-RAY DIFFRACTION AUTHOR C.K.SLAUGHTER,E.T.SHIELDS,E.N.MAGNA,C.D.SNOW REVDAT 1 19-AUG-26 36OT 0 JRNL AUTH C.K.SLAUGHTER,E.T.SHIELDS,E.N.MAGNA,A.PLATT,C.D.SNOW JRNL TITL CRYSTALLINE BIOMATERIALS FOR SITE-SPECIFIC ORGANIZATION OF JRNL TITL 2 MODIFIED DNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2.0_5936 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 16527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7000 - 7.7700 0.92 1186 133 0.1755 0.2050 REMARK 3 2 7.7700 - 6.1700 0.98 1247 142 0.2690 0.3291 REMARK 3 3 6.1700 - 5.4000 0.99 1249 147 0.2566 0.3022 REMARK 3 4 5.3900 - 4.9000 0.99 1266 119 0.2654 0.3363 REMARK 3 5 4.9000 - 4.5500 1.00 1270 142 0.2590 0.2699 REMARK 3 6 4.5500 - 4.2800 0.98 1218 146 0.2775 0.3247 REMARK 3 7 4.2800 - 4.0700 0.97 1222 133 0.2997 0.3342 REMARK 3 8 4.0700 - 3.8900 0.99 1235 134 0.3240 0.3015 REMARK 3 9 3.8900 - 3.7400 0.99 1241 155 0.3555 0.3708 REMARK 3 10 3.7400 - 3.6100 0.99 1229 135 0.3843 0.4224 REMARK 3 11 3.6100 - 3.5000 0.99 1231 134 0.4396 0.4386 REMARK 3 12 3.5000 - 3.4000 0.99 1267 146 0.4436 0.4794 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.636 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.265 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 132.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 191.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3113 REMARK 3 ANGLE : 0.694 4500 REMARK 3 CHIRALITY : 0.043 501 REMARK 3 PLANARITY : 0.006 365 REMARK 3 DIHEDRAL : 27.784 1240 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2031 -20.4339 -8.2824 REMARK 3 T TENSOR REMARK 3 T11: 1.8430 T22: 1.3896 REMARK 3 T33: 1.6076 T12: -0.2062 REMARK 3 T13: -0.2415 T23: 0.4185 REMARK 3 L TENSOR REMARK 3 L11: 0.8115 L22: 0.4507 REMARK 3 L33: 0.3181 L12: -0.2486 REMARK 3 L13: -0.4922 L23: 0.4011 REMARK 3 S TENSOR REMARK 3 S11: -0.7666 S12: 0.2821 S13: -0.2388 REMARK 3 S21: 1.0462 S22: 1.0055 S23: -0.4216 REMARK 3 S31: 0.3640 S32: -0.3415 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.7045 10.2108 -42.5595 REMARK 3 T TENSOR REMARK 3 T11: 1.7676 T22: 2.9298 REMARK 3 T33: 2.0929 T12: 0.0340 REMARK 3 T13: -0.3159 T23: 0.8007 REMARK 3 L TENSOR REMARK 3 L11: 0.0304 L22: -0.0063 REMARK 3 L33: 0.2068 L12: -0.0351 REMARK 3 L13: 0.1453 L23: -0.1094 REMARK 3 S TENSOR REMARK 3 S11: -0.3467 S12: -0.9014 S13: 0.1816 REMARK 3 S21: 0.1190 S22: 0.5450 S23: 0.2756 REMARK 3 S31: 0.5369 S32: 0.0414 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.1302 27.0696 -63.5882 REMARK 3 T TENSOR REMARK 3 T11: 3.6596 T22: 2.2987 REMARK 3 T33: 3.6558 T12: -0.9430 REMARK 3 T13: -1.2346 T23: 1.0676 REMARK 3 L TENSOR REMARK 3 L11: 0.0712 L22: 0.0121 REMARK 3 L33: 0.0337 L12: 0.0187 REMARK 3 L13: 0.0445 L23: 0.0246 REMARK 3 S TENSOR REMARK 3 S11: -0.5306 S12: 0.3821 S13: -0.2103 REMARK 3 S21: -0.2637 S22: 1.1026 S23: -0.1481 REMARK 3 S31: 0.1978 S32: -0.0307 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.9862 14.1443 -43.5240 REMARK 3 T TENSOR REMARK 3 T11: 2.2777 T22: 3.0693 REMARK 3 T33: 2.3073 T12: -0.0877 REMARK 3 T13: -0.1806 T23: 1.1988 REMARK 3 L TENSOR REMARK 3 L11: -0.0002 L22: 0.1474 REMARK 3 L33: 0.1400 L12: 0.0328 REMARK 3 L13: 0.0102 L23: 0.1422 REMARK 3 S TENSOR REMARK 3 S11: -0.3680 S12: 0.6239 S13: 0.2081 REMARK 3 S21: -0.3183 S22: -0.1149 S23: -0.1763 REMARK 3 S31: -0.0452 S32: -0.5657 S33: -0.0012 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.4127 -3.9623 -26.1434 REMARK 3 T TENSOR REMARK 3 T11: 1.7111 T22: 2.5818 REMARK 3 T33: 1.8040 T12: -0.1994 REMARK 3 T13: 0.2099 T23: 0.6794 REMARK 3 L TENSOR REMARK 3 L11: 1.8680 L22: 0.6016 REMARK 3 L33: 1.2090 L12: 1.0632 REMARK 3 L13: 1.5046 L23: 0.8350 REMARK 3 S TENSOR REMARK 3 S11: -0.9806 S12: 1.7753 S13: 0.5587 REMARK 3 S21: -0.9266 S22: 0.0481 S23: 0.1840 REMARK 3 S31: 0.2831 S32: -0.9881 S33: -0.1687 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6503 -15.4739 -21.0889 REMARK 3 T TENSOR REMARK 3 T11: 1.6372 T22: 1.3598 REMARK 3 T33: 1.1744 T12: -0.0258 REMARK 3 T13: 0.0311 T23: 0.2929 REMARK 3 L TENSOR REMARK 3 L11: 0.0597 L22: 0.1018 REMARK 3 L33: 0.0369 L12: -0.0986 REMARK 3 L13: -0.0406 L23: 0.0599 REMARK 3 S TENSOR REMARK 3 S11: -0.4769 S12: 0.0078 S13: -0.4545 REMARK 3 S21: 0.1326 S22: 0.2082 S23: -0.3917 REMARK 3 S31: 0.2903 S32: 0.0532 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5835 -26.0842 -3.7455 REMARK 3 T TENSOR REMARK 3 T11: 1.8372 T22: 1.4403 REMARK 3 T33: 1.6600 T12: -0.3114 REMARK 3 T13: 0.0858 T23: 0.4100 REMARK 3 L TENSOR REMARK 3 L11: 0.4702 L22: 1.2385 REMARK 3 L33: 1.2418 L12: -0.1792 REMARK 3 L13: 0.2855 L23: 1.0775 REMARK 3 S TENSOR REMARK 3 S11: -1.4218 S12: 0.3841 S13: -0.7810 REMARK 3 S21: -0.3046 S22: -0.1116 S23: 0.4321 REMARK 3 S31: 0.1471 S32: -0.3650 S33: -0.2832 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 15 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1823 7.2533 -5.8298 REMARK 3 T TENSOR REMARK 3 T11: 0.8939 T22: 0.8608 REMARK 3 T33: 2.2589 T12: -0.1024 REMARK 3 T13: 0.0747 T23: 0.1631 REMARK 3 L TENSOR REMARK 3 L11: 0.4228 L22: 0.4382 REMARK 3 L33: 6.4639 L12: 0.0423 REMARK 3 L13: 1.3702 L23: -0.6703 REMARK 3 S TENSOR REMARK 3 S11: 0.0684 S12: 0.0400 S13: -0.1328 REMARK 3 S21: 0.1063 S22: 0.0639 S23: 0.1497 REMARK 3 S31: 0.3789 S32: 1.4960 S33: 0.2424 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 33 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6736 11.1681 -16.5156 REMARK 3 T TENSOR REMARK 3 T11: 1.2125 T22: 1.2875 REMARK 3 T33: 1.3905 T12: 0.1150 REMARK 3 T13: -0.1600 T23: 0.5760 REMARK 3 L TENSOR REMARK 3 L11: 0.6427 L22: 0.4917 REMARK 3 L33: 0.6525 L12: 0.3896 REMARK 3 L13: -0.6242 L23: -0.3478 REMARK 3 S TENSOR REMARK 3 S11: -0.7897 S12: 1.5488 S13: 0.9195 REMARK 3 S21: -0.6787 S22: 0.6521 S23: -0.8568 REMARK 3 S31: 0.2007 S32: -0.1244 S33: -0.0337 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.8098 2.5935 -18.2829 REMARK 3 T TENSOR REMARK 3 T11: 1.6575 T22: 0.5493 REMARK 3 T33: 1.3378 T12: -0.8457 REMARK 3 T13: -0.1225 T23: 0.7360 REMARK 3 L TENSOR REMARK 3 L11: 2.8151 L22: 1.1071 REMARK 3 L33: 0.0121 L12: -0.3976 REMARK 3 L13: 0.1592 L23: -0.0129 REMARK 3 S TENSOR REMARK 3 S11: -0.0732 S12: 0.4275 S13: 0.0408 REMARK 3 S21: -0.2878 S22: -0.1970 S23: 0.2595 REMARK 3 S31: 0.1033 S32: 0.1993 S33: -0.0066 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 90 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.0907 8.7205 -3.7360 REMARK 3 T TENSOR REMARK 3 T11: 1.2828 T22: 1.5049 REMARK 3 T33: 1.7062 T12: -0.1308 REMARK 3 T13: 0.0490 T23: 0.2804 REMARK 3 L TENSOR REMARK 3 L11: 0.0760 L22: 1.5936 REMARK 3 L33: 0.0924 L12: 0.4509 REMARK 3 L13: 0.1019 L23: 0.1093 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: -0.5997 S13: 1.0588 REMARK 3 S21: 0.0118 S22: -1.0089 S23: -0.4521 REMARK 3 S31: 0.0895 S32: -1.1677 S33: -0.0083 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 133 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9819 9.9425 -7.4271 REMARK 3 T TENSOR REMARK 3 T11: 0.8711 T22: 1.5137 REMARK 3 T33: 1.4878 T12: -0.0511 REMARK 3 T13: 0.0299 T23: -0.1256 REMARK 3 L TENSOR REMARK 3 L11: 1.9694 L22: 1.1343 REMARK 3 L33: 1.5195 L12: -1.1408 REMARK 3 L13: 1.3352 L23: -1.3171 REMARK 3 S TENSOR REMARK 3 S11: -0.0731 S12: -0.4237 S13: 2.6690 REMARK 3 S21: -0.0460 S22: -1.1323 S23: 0.3824 REMARK 3 S31: -0.5607 S32: -0.8422 S33: -0.6448 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 160 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1327 2.7039 -7.6379 REMARK 3 T TENSOR REMARK 3 T11: 1.0243 T22: -0.7003 REMARK 3 T33: 0.8277 T12: -0.5591 REMARK 3 T13: 0.5902 T23: 1.7847 REMARK 3 L TENSOR REMARK 3 L11: 0.2186 L22: 0.4920 REMARK 3 L33: 0.2095 L12: -0.2495 REMARK 3 L13: 0.1375 L23: -0.0257 REMARK 3 S TENSOR REMARK 3 S11: -0.0810 S12: -0.0933 S13: 0.2510 REMARK 3 S21: -0.2459 S22: 0.4752 S23: 0.2358 REMARK 3 S31: -0.4524 S32: -0.0368 S33: 0.8012 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 179 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9556 -3.5085 1.7174 REMARK 3 T TENSOR REMARK 3 T11: -0.4398 T22: 1.6466 REMARK 3 T33: 0.2022 T12: -0.1358 REMARK 3 T13: 0.6198 T23: 0.3575 REMARK 3 L TENSOR REMARK 3 L11: 0.4234 L22: 3.2104 REMARK 3 L33: -0.0077 L12: 1.1788 REMARK 3 L13: 0.0056 L23: 0.0189 REMARK 3 S TENSOR REMARK 3 S11: -0.7539 S12: -0.3224 S13: -0.7908 REMARK 3 S21: 1.1005 S22: -0.5868 S23: 0.8671 REMARK 3 S31: 0.7527 S32: -0.4953 S33: -1.6726 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 193 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3940 -14.6485 -3.3370 REMARK 3 T TENSOR REMARK 3 T11: 1.5579 T22: 0.9162 REMARK 3 T33: 1.2095 T12: -0.5895 REMARK 3 T13: -0.2240 T23: 1.0838 REMARK 3 L TENSOR REMARK 3 L11: 0.2234 L22: 0.4639 REMARK 3 L33: 0.5474 L12: -0.3149 REMARK 3 L13: 0.0008 L23: -0.0831 REMARK 3 S TENSOR REMARK 3 S11: -0.2252 S12: -0.0183 S13: -0.2165 REMARK 3 S21: 0.7163 S22: -0.4175 S23: -0.5331 REMARK 3 S31: 0.0260 S32: 0.1833 S33: -0.5279 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 209 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6105 -6.8262 -7.8548 REMARK 3 T TENSOR REMARK 3 T11: 1.0002 T22: 1.5754 REMARK 3 T33: 0.6574 T12: -0.8924 REMARK 3 T13: 0.1518 T23: 0.9938 REMARK 3 L TENSOR REMARK 3 L11: 0.5540 L22: -0.0157 REMARK 3 L33: 0.2049 L12: 0.2390 REMARK 3 L13: 0.3659 L23: 0.0961 REMARK 3 S TENSOR REMARK 3 S11: 0.2485 S12: 0.8690 S13: -0.8426 REMARK 3 S21: 0.4301 S22: 0.1064 S23: -0.7220 REMARK 3 S31: -0.7316 S32: 0.7736 S33: 0.3535 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 36OT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-26. REMARK 100 THE DEPOSITION ID IS D_1000309186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16527 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 45.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 79.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M LITHIUM SULFATE, 30MM MAGNESIUM REMARK 280 ACETATE, 50MM MES, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 31.72706 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.64400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.97588 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 31.72706 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 58.64400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 71.97588 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC B 8 REMARK 465 DC B 9 REMARK 465 DC B 10 REMARK 465 MET C -11 REMARK 465 ARG C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLU C 3 REMARK 465 THR C 4 REMARK 465 ALA C 5 REMARK 465 VAL C 6 REMARK 465 ILE C 7 REMARK 465 ASN C 8 REMARK 465 HIS C 9 REMARK 465 LYS C 10 REMARK 465 LYS C 11 REMARK 465 ARG C 12 REMARK 465 LYS C 13 REMARK 465 ASN C 14 REMARK 465 GLY C 51 REMARK 465 THR C 52 REMARK 465 LEU C 53 REMARK 465 GLN C 54 REMARK 465 GLU C 55 REMARK 465 HIS C 56 REMARK 465 ASP C 102 REMARK 465 ALA C 103 REMARK 465 GLY C 104 REMARK 465 ASP C 105 REMARK 465 GLU C 106 REMARK 465 SER C 247 REMARK 465 MET C 248 REMARK 465 THR C 249 REMARK 465 THR C 250 REMARK 465 GLY C 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG C 17 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 24 CG CD1 CD2 REMARK 470 GLU C 26 CG CD OE1 OE2 REMARK 470 LYS C 36 CG CD CE NZ REMARK 470 MET C 38 CG SD CE REMARK 470 LEU C 39 CG CD1 CD2 REMARK 470 PHE C 42 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL C 43 CG1 CG2 REMARK 470 ARG C 47 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 48 CG CD CE NZ REMARK 470 ASP C 57 CG OD1 OD2 REMARK 470 ILE C 59 CG1 CG2 CD1 REMARK 470 GLU C 61 CG CD OE1 OE2 REMARK 470 ILE C 62 CG1 CG2 CD1 REMARK 470 LYS C 66 CG CD CE NZ REMARK 470 TYR C 67 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE C 70 CG1 CG2 CD1 REMARK 470 LEU C 73 CG CD1 CD2 REMARK 470 LYS C 80 CG CD CE NZ REMARK 470 LYS C 87 CG CD CE NZ REMARK 470 ARG C 98 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 100 CG CD OE1 OE2 REMARK 470 GLU C 101 CG CD OE1 OE2 REMARK 470 GLU C 110 CG CD OE1 OE2 REMARK 470 LYS C 117 CG CD CE NZ REMARK 470 LEU C 126 CG CD1 CD2 REMARK 470 SER C 128 OG REMARK 470 VAL C 129 CG1 CG2 REMARK 470 HIS C 130 CG ND1 CD2 CE1 NE2 REMARK 470 ILE C 136 CG1 CG2 CD1 REMARK 470 LEU C 142 CG CD1 CD2 REMARK 470 GLN C 143 CG CD OE1 NE2 REMARK 470 ASN C 144 CG OD1 ND2 REMARK 470 ARG C 145 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 148 CG CD OE1 NE2 REMARK 470 ARG C 150 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 155 CG CD CE NZ REMARK 470 GLU C 167 CG CD OE1 OE2 REMARK 470 ARG C 173 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 180 CG1 CG2 CD1 REMARK 470 SER C 182 OG REMARK 470 LEU C 183 CG CD1 CD2 REMARK 470 LYS C 184 CG CD CE NZ REMARK 470 LEU C 194 CG CD1 CD2 REMARK 470 VAL C 211 CG1 CG2 REMARK 470 VAL C 213 CG1 CG2 REMARK 470 ASN C 214 CG OD1 ND2 REMARK 470 ARG C 223 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 229 CG CD CE NZ REMARK 470 LYS C 231 CG CD CE NZ REMARK 470 ARG C 233 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 234 CG CD OE1 NE2 REMARK 470 ILE C 238 CG1 CG2 CD1 REMARK 470 VAL C 239 CG1 CG2 REMARK 470 ARG C 243 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 8 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DG B 25 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC B 38 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR C 97 -165.18 -119.20 REMARK 500 ARG C 98 81.97 -173.70 REMARK 500 ASN C 144 -108.33 59.94 REMARK 500 PHE C 208 -66.87 -107.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG A 14 OP2 REMARK 620 2 GLU C 77 OE2 137.7 REMARK 620 3 ASP C 81 OD1 137.6 83.3 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36NQ RELATED DB: PDB DBREF 36OT A 0 30 PDB 36OT 36OT 0 30 DBREF 36OT B 8 42 PDB 36OT 36OT 8 42 DBREF 36OT C 1 251 UNP P03856 REPE1_ECOLI 1 251 SEQADV 36OT MET C -11 UNP P03856 INITIATING METHIONINE SEQADV 36OT ARG C -10 UNP P03856 EXPRESSION TAG SEQADV 36OT GLY C -9 UNP P03856 EXPRESSION TAG SEQADV 36OT SER C -8 UNP P03856 EXPRESSION TAG SEQADV 36OT HIS C -7 UNP P03856 EXPRESSION TAG SEQADV 36OT HIS C -6 UNP P03856 EXPRESSION TAG SEQADV 36OT HIS C -5 UNP P03856 EXPRESSION TAG SEQADV 36OT HIS C -4 UNP P03856 EXPRESSION TAG SEQADV 36OT HIS C -3 UNP P03856 EXPRESSION TAG SEQADV 36OT HIS C -2 UNP P03856 EXPRESSION TAG SEQADV 36OT GLY C -1 UNP P03856 EXPRESSION TAG SEQADV 36OT SER C 0 UNP P03856 EXPRESSION TAG SEQADV 36OT PRO C 118 UNP P03856 ARG 118 CONFLICT SEQADV 36OT GLU C 172 UNP P03856 TYR 172 ENGINEERED MUTATION SEQRES 1 A 31 DG DA DC DT DG DT DG DA DC DA DA DA DT SEQRES 2 A 31 DT DG DC DC DC DT DC DA DA DG DA DC DG SEQRES 3 A 31 DG DC DC DC DG SEQRES 1 B 35 DC DC DC DC DT DC DC DG DG DG DC DC DG SEQRES 2 B 35 DT DC DT DT DG DA DG DG DG DC DA DA DT SEQRES 3 B 35 DT DT DG DT DC DA DC DA DG SEQRES 1 C 263 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 C 263 ALA GLU THR ALA VAL ILE ASN HIS LYS LYS ARG LYS ASN SEQRES 3 C 263 SER PRO ARG ILE VAL GLN SER ASN ASP LEU THR GLU ALA SEQRES 4 C 263 ALA TYR SER LEU SER ARG ASP GLN LYS ARG MET LEU TYR SEQRES 5 C 263 LEU PHE VAL ASP GLN ILE ARG LYS SER ASP GLY THR LEU SEQRES 6 C 263 GLN GLU HIS ASP GLY ILE CYS GLU ILE HIS VAL ALA LYS SEQRES 7 C 263 TYR ALA GLU ILE PHE GLY LEU THR SER ALA GLU ALA SER SEQRES 8 C 263 LYS ASP ILE ARG GLN ALA LEU LYS SER PHE ALA GLY LYS SEQRES 9 C 263 GLU VAL VAL PHE TYR ARG PRO GLU GLU ASP ALA GLY ASP SEQRES 10 C 263 GLU LYS GLY TYR GLU SER PHE PRO TRP PHE ILE LYS PRO SEQRES 11 C 263 ALA HIS SER PRO SER ARG GLY LEU TYR SER VAL HIS ILE SEQRES 12 C 263 ASN PRO TYR LEU ILE PRO PHE PHE ILE GLY LEU GLN ASN SEQRES 13 C 263 ARG PHE THR GLN PHE ARG LEU SER GLU THR LYS GLU ILE SEQRES 14 C 263 THR ASN PRO TYR ALA MET ARG LEU TYR GLU SER LEU CYS SEQRES 15 C 263 GLN GLU ARG LYS PRO ASP GLY SER GLY ILE VAL SER LEU SEQRES 16 C 263 LYS ILE ASP TRP ILE ILE GLU ARG TYR GLN LEU PRO GLN SEQRES 17 C 263 SER TYR GLN ARG MET PRO ASP PHE ARG ARG ARG PHE LEU SEQRES 18 C 263 GLN VAL CYS VAL ASN GLU ILE ASN SER ARG THR PRO MET SEQRES 19 C 263 ARG LEU SER TYR ILE GLU LYS LYS LYS GLY ARG GLN THR SEQRES 20 C 263 THR HIS ILE VAL PHE SER PHE ARG ASP ILE THR SER MET SEQRES 21 C 263 THR THR GLY HET MG A 101 1 HET MG C 301 1 HETNAM MG MAGNESIUM ION FORMUL 4 MG 2(MG 2+) HELIX 1 AA1 ASN C 22 GLU C 26 1 5 HELIX 2 AA2 SER C 32 LYS C 48 1 17 HELIX 3 AA3 VAL C 64 GLY C 72 1 9 HELIX 4 AA4 THR C 74 PHE C 89 1 16 HELIX 5 AA5 ASN C 132 TYR C 134 5 3 HELIX 6 AA6 LEU C 135 ILE C 140 1 6 HELIX 7 AA7 LEU C 151 LYS C 155 1 5 HELIX 8 AA8 ASN C 159 GLU C 172 1 14 HELIX 9 AA9 ILE C 185 GLN C 193 1 9 HELIX 10 AB1 PRO C 195 GLN C 199 5 5 HELIX 11 AB2 ARG C 200 PHE C 208 1 9 HELIX 12 AB3 PHE C 208 THR C 220 1 13 SHEET 1 AA1 2 ARG C 17 SER C 21 0 SHEET 2 AA1 2 PHE C 146 ARG C 150 -1 O THR C 147 N GLN C 20 SHEET 1 AA2 3 ILE C 59 HIS C 63 0 SHEET 2 AA2 3 LEU C 126 HIS C 130 -1 O VAL C 129 N CYS C 60 SHEET 3 AA2 3 HIS C 120 SER C 123 -1 N HIS C 120 O SER C 128 SHEET 1 AA3 2 GLU C 93 ARG C 98 0 SHEET 2 AA3 2 GLY C 108 PRO C 113 -1 O GLU C 110 N PHE C 96 SHEET 1 AA4 3 GLY C 179 LYS C 184 0 SHEET 2 AA4 3 GLN C 234 ASP C 244 -1 O ILE C 238 N LEU C 183 SHEET 3 AA4 3 MET C 222 LYS C 231 -1 N ARG C 223 O ARG C 243 LINK N3 DG A 14 MG MG A 101 1555 1555 2.03 LINK OP2 DG A 14 MG MG C 301 1555 1555 2.98 LINK OE2 GLU C 77 MG MG C 301 1555 1555 1.88 LINK OD1 ASP C 81 MG MG C 301 1555 1555 2.76 CRYST1 73.240 117.288 144.284 90.00 93.89 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013654 0.000000 0.000928 0.00000 SCALE2 0.000000 0.008526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006947 0.00000 CONECT 292 2922 CONECT 310 2921 CONECT 1678 2922 CONECT 1701 2922 CONECT 2921 310 CONECT 2922 292 1678 1701 MASTER 614 0 2 12 10 0 0 6 2917 3 6 27 END