HEADER TRANSFERASE 03-JUL-26 36WM TITLE MEVALONATE KINASE FROM SACCHAROMYCES CEREVISIAE WITH FARNESYL TITLE 2 PYROPHOSPHATE (FPP) BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEVALONATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MK,MVK,ERGOSTEROL BIOSYNTHESIS PROTEIN 12,REGULATION OF COMPND 5 AUTONOMOUS REPLICATION PROTEIN 1; COMPND 6 EC: 2.7.1.36; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: ERG12, RAR1, YMR208W, YM8261.02; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METABOLIC ENZYME, MEVALONATE PATHWAY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.L.S.D'EMILIA,E.R.RAGWAN,V.CHANG,Y.KUNG REVDAT 1 30-SEP-26 36WM 0 JRNL AUTH R.L.S.D'EMILIA,K.A.MCCASKEY,E.R.RAGWAN,J.H.KIM,V.CHANG, JRNL AUTH 2 M.M.TANG,Y.KUNG JRNL TITL STRUCTURAL BASIS OF MEVALONATE PATHWAY REGULATION BY JRNL TITL 2 FEEDBACK INHIBITION OF MEVALONATE KINASE. JRNL REF J.BIOL.CHEM. 13566 2026 JRNL REFN ESSN 1083-351X JRNL PMID 42754161 JRNL DOI 10.1016/J.JBC.2026.113566 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 55861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2793 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 70.4500 - 5.6700 1.00 2941 155 0.1788 0.2168 REMARK 3 2 5.6700 - 4.5000 1.00 2779 146 0.1555 0.1670 REMARK 3 3 4.5000 - 3.9300 1.00 2714 143 0.1386 0.1666 REMARK 3 4 3.9300 - 3.5700 1.00 2707 142 0.1509 0.1717 REMARK 3 5 3.5700 - 3.3200 1.00 2682 142 0.1722 0.1655 REMARK 3 6 3.3200 - 3.1200 1.00 2668 142 0.1855 0.2106 REMARK 3 7 3.1200 - 2.9600 1.00 2649 139 0.1856 0.2007 REMARK 3 8 2.9600 - 2.8400 1.00 2669 140 0.1931 0.2047 REMARK 3 9 2.8400 - 2.7300 1.00 2649 138 0.2040 0.2288 REMARK 3 10 2.7300 - 2.6300 1.00 2642 139 0.2128 0.2539 REMARK 3 11 2.6300 - 2.5500 1.00 2639 140 0.2244 0.2505 REMARK 3 12 2.5500 - 2.4800 1.00 2639 139 0.2353 0.2606 REMARK 3 13 2.4800 - 2.4100 1.00 2628 138 0.2430 0.2845 REMARK 3 14 2.4100 - 2.3500 1.00 2615 137 0.2567 0.2622 REMARK 3 15 2.3500 - 2.3000 1.00 2630 139 0.2549 0.2823 REMARK 3 16 2.3000 - 2.2500 1.00 2606 138 0.2727 0.3198 REMARK 3 17 2.2500 - 2.2100 1.00 2622 138 0.2906 0.3196 REMARK 3 18 2.2100 - 2.1600 1.00 2612 138 0.3214 0.3529 REMARK 3 19 2.1600 - 2.1300 1.00 2612 136 0.3358 0.3709 REMARK 3 20 2.1300 - 2.0900 0.91 2365 124 0.3611 0.3829 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.259 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.791 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3547 REMARK 3 ANGLE : 0.866 4815 REMARK 3 CHIRALITY : 0.049 561 REMARK 3 PLANARITY : 0.006 619 REMARK 3 DIHEDRAL : 14.720 1276 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -8 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4375 -22.3926 33.0366 REMARK 3 T TENSOR REMARK 3 T11: 0.2819 T22: 0.3673 REMARK 3 T33: 0.2773 T12: -0.0146 REMARK 3 T13: -0.0014 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.7121 L22: 0.1824 REMARK 3 L33: 0.7942 L12: 0.0122 REMARK 3 L13: 0.7137 L23: 0.1606 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.0543 S13: -0.0339 REMARK 3 S21: -0.0749 S22: 0.0396 S23: -0.0118 REMARK 3 S31: 0.0203 S32: -0.0085 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2240 -23.1858 21.8013 REMARK 3 T TENSOR REMARK 3 T11: 0.2994 T22: 0.5525 REMARK 3 T33: 0.3771 T12: -0.0450 REMARK 3 T13: 0.0078 T23: -0.1020 REMARK 3 L TENSOR REMARK 3 L11: 0.6666 L22: 0.3005 REMARK 3 L33: 0.5362 L12: 0.0976 REMARK 3 L13: 0.0476 L23: -0.0627 REMARK 3 S TENSOR REMARK 3 S11: -0.0160 S12: 0.2766 S13: -0.0579 REMARK 3 S21: -0.2064 S22: 0.1460 S23: -0.1636 REMARK 3 S31: -0.1461 S32: 0.5232 S33: 0.0014 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1749 -26.8608 35.5533 REMARK 3 T TENSOR REMARK 3 T11: 0.2573 T22: 0.3939 REMARK 3 T33: 0.3445 T12: 0.0016 REMARK 3 T13: -0.0255 T23: -0.0485 REMARK 3 L TENSOR REMARK 3 L11: 0.8725 L22: 0.3966 REMARK 3 L33: 0.5249 L12: 0.1413 REMARK 3 L13: 0.2387 L23: 0.0250 REMARK 3 S TENSOR REMARK 3 S11: 0.0384 S12: 0.0311 S13: -0.1351 REMARK 3 S21: 0.0316 S22: 0.0449 S23: -0.1023 REMARK 3 S31: 0.0477 S32: 0.0673 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2272 -30.6463 48.5463 REMARK 3 T TENSOR REMARK 3 T11: 0.4018 T22: 0.3827 REMARK 3 T33: 0.4866 T12: -0.0150 REMARK 3 T13: -0.0605 T23: -0.0645 REMARK 3 L TENSOR REMARK 3 L11: 0.0271 L22: 0.1711 REMARK 3 L33: 0.0715 L12: 0.0510 REMARK 3 L13: 0.0228 L23: 0.0552 REMARK 3 S TENSOR REMARK 3 S11: -0.3901 S12: 0.6125 S13: -0.2015 REMARK 3 S21: 0.0671 S22: 0.3436 S23: -0.3386 REMARK 3 S31: 0.2642 S32: 0.0150 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 232 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9342 -15.6723 60.5563 REMARK 3 T TENSOR REMARK 3 T11: 0.2193 T22: 0.2725 REMARK 3 T33: 0.2443 T12: 0.0337 REMARK 3 T13: -0.0093 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 1.1523 L22: 0.5831 REMARK 3 L33: 1.3019 L12: -0.0056 REMARK 3 L13: 0.3355 L23: 0.3223 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: -0.0234 S13: -0.0575 REMARK 3 S21: 0.0395 S22: -0.0512 S23: 0.0423 REMARK 3 S31: 0.0476 S32: -0.2069 S33: -0.0002 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 392 THROUGH 443 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0254 -22.9717 40.2530 REMARK 3 T TENSOR REMARK 3 T11: 0.2964 T22: 0.5448 REMARK 3 T33: 0.3792 T12: -0.0052 REMARK 3 T13: -0.0011 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 0.4646 L22: 0.1472 REMARK 3 L33: 0.1913 L12: -0.0709 REMARK 3 L13: 0.0858 L23: 0.1288 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: -0.4974 S13: -0.0020 REMARK 3 S21: 0.0812 S22: 0.0376 S23: 0.0495 REMARK 3 S31: -0.0777 S32: -0.2254 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 36WM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-26. REMARK 100 THE DEPOSITION ID IS D_1000309579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55993 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 87.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 6.0, 900-1100 MM SODIUM REMARK 280 POTASSIUM TARTRATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 131.44000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.72500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.72500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 197.16000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.72500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.72500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.72000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.72500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.72500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 197.16000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.72500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.72500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.72000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 131.44000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 131.44000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -24 REMARK 465 GLY A -23 REMARK 465 SER A -22 REMARK 465 SER A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A -8 OG1 CG2 REMARK 470 VAL A 76 CG1 CG2 REMARK 470 SER A 78 OG REMARK 470 GLU A 108 CG CD OE1 OE2 REMARK 470 ASN A 170 CG OD1 ND2 REMARK 470 ASP A 171 CG OD1 OD2 REMARK 470 ASN A 220 CG OD1 ND2 REMARK 470 THR A 222 OG1 CG2 REMARK 470 ILE A 223 CG1 CG2 CD1 REMARK 470 ASN A 224 CG OD1 ND2 REMARK 470 THR A 225 OG1 CG2 REMARK 470 ASN A 226 CG OD1 ND2 REMARK 470 LYS A 294 CG CD CE NZ REMARK 470 THR A 296 OG1 CG2 REMARK 470 ASP A 297 CG OD1 OD2 REMARK 470 ASP A 298 CG OD1 OD2 REMARK 470 GLU A 299 CG CD OE1 OE2 REMARK 470 ARG A 343 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 421 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 19 -38.16 73.98 REMARK 500 LEU A 172 -11.54 67.68 REMARK 500 ASN A 210 -131.64 54.51 REMARK 500 ASN A 220 85.98 175.54 REMARK 500 ARG A 245 14.53 58.72 REMARK 500 CYS A 293 35.91 -97.19 REMARK 500 ASP A 365 43.95 -79.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 149 OG REMARK 620 2 FPP A 501 O3A 132.3 REMARK 620 3 HOH A 640 O 66.5 161.3 REMARK 620 N 1 2 DBREF 36WM A 1 443 UNP P07277 ERG12_YEAST 1 443 SEQADV 36WM MET A -24 UNP P07277 INITIATING METHIONINE SEQADV 36WM GLY A -23 UNP P07277 EXPRESSION TAG SEQADV 36WM SER A -22 UNP P07277 EXPRESSION TAG SEQADV 36WM SER A -21 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A -20 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A -19 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A -18 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A -17 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A -16 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A -15 UNP P07277 EXPRESSION TAG SEQADV 36WM ASP A -14 UNP P07277 EXPRESSION TAG SEQADV 36WM TYR A -13 UNP P07277 EXPRESSION TAG SEQADV 36WM ASP A -12 UNP P07277 EXPRESSION TAG SEQADV 36WM ILE A -11 UNP P07277 EXPRESSION TAG SEQADV 36WM PRO A -10 UNP P07277 EXPRESSION TAG SEQADV 36WM THR A -9 UNP P07277 EXPRESSION TAG SEQADV 36WM THR A -8 UNP P07277 EXPRESSION TAG SEQADV 36WM GLU A -7 UNP P07277 EXPRESSION TAG SEQADV 36WM ASN A -6 UNP P07277 EXPRESSION TAG SEQADV 36WM LEU A -5 UNP P07277 EXPRESSION TAG SEQADV 36WM TYR A -4 UNP P07277 EXPRESSION TAG SEQADV 36WM PHE A -3 UNP P07277 EXPRESSION TAG SEQADV 36WM GLN A -2 UNP P07277 EXPRESSION TAG SEQADV 36WM GLY A -1 UNP P07277 EXPRESSION TAG SEQADV 36WM HIS A 0 UNP P07277 EXPRESSION TAG SEQRES 1 A 468 MET GLY SER SER HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 468 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY HIS MET SEQRES 3 A 468 SER LEU PRO PHE LEU THR SER ALA PRO GLY LYS VAL ILE SEQRES 4 A 468 ILE PHE GLY GLU HIS SER ALA VAL TYR ASN LYS PRO ALA SEQRES 5 A 468 VAL ALA ALA SER VAL SER ALA LEU ARG THR TYR LEU LEU SEQRES 6 A 468 ILE SER GLU SER SER ALA PRO ASP THR ILE GLU LEU ASP SEQRES 7 A 468 PHE PRO ASP ILE SER PHE ASN HIS LYS TRP SER ILE ASN SEQRES 8 A 468 ASP PHE ASN ALA ILE THR GLU ASP GLN VAL ASN SER GLN SEQRES 9 A 468 LYS LEU ALA LYS ALA GLN GLN ALA THR ASP GLY LEU SER SEQRES 10 A 468 GLN GLU LEU VAL SER LEU LEU ASP PRO LEU LEU ALA GLN SEQRES 11 A 468 LEU SER GLU SER PHE HIS TYR HIS ALA ALA PHE CYS PHE SEQRES 12 A 468 LEU TYR MET PHE VAL CYS LEU CYS PRO HIS ALA LYS ASN SEQRES 13 A 468 ILE LYS PHE SER LEU LYS SER THR LEU PRO ILE GLY ALA SEQRES 14 A 468 GLY LEU GLY SER SER ALA SER ILE SER VAL SER LEU ALA SEQRES 15 A 468 LEU ALA MET ALA TYR LEU GLY GLY LEU ILE GLY SER ASN SEQRES 16 A 468 ASP LEU GLU LYS LEU SER GLU ASN ASP LYS HIS ILE VAL SEQRES 17 A 468 ASN GLN TRP ALA PHE ILE GLY GLU LYS CYS ILE HIS GLY SEQRES 18 A 468 THR PRO SER GLY ILE ASP ASN ALA VAL ALA THR TYR GLY SEQRES 19 A 468 ASN ALA LEU LEU PHE GLU LYS ASP SER HIS ASN GLY THR SEQRES 20 A 468 ILE ASN THR ASN ASN PHE LYS PHE LEU ASP ASP PHE PRO SEQRES 21 A 468 ALA ILE PRO MET ILE LEU THR TYR THR ARG ILE PRO ARG SEQRES 22 A 468 SER THR LYS ASP LEU VAL ALA ARG VAL ARG VAL LEU VAL SEQRES 23 A 468 THR GLU LYS PHE PRO GLU VAL MET LYS PRO ILE LEU ASP SEQRES 24 A 468 ALA MET GLY GLU CYS ALA LEU GLN GLY LEU GLU ILE MET SEQRES 25 A 468 THR LYS LEU SER LYS CYS LYS GLY THR ASP ASP GLU ALA SEQRES 26 A 468 VAL GLU THR ASN ASN GLU LEU TYR GLU GLN LEU LEU GLU SEQRES 27 A 468 LEU ILE ARG ILE ASN HIS GLY LEU LEU VAL SER ILE GLY SEQRES 28 A 468 VAL SER HIS PRO GLY LEU GLU LEU ILE LYS ASN LEU SER SEQRES 29 A 468 ASP ASP LEU ARG ILE GLY SER THR LYS LEU THR GLY ALA SEQRES 30 A 468 GLY GLY GLY GLY CYS SER LEU THR LEU LEU ARG ARG ASP SEQRES 31 A 468 ILE THR GLN GLU GLN ILE ASP SER PHE LYS LYS LYS LEU SEQRES 32 A 468 GLN ASP ASP PHE SER TYR GLU THR PHE GLU THR ASP LEU SEQRES 33 A 468 GLY GLY THR GLY CYS CYS LEU LEU SER ALA LYS ASN LEU SEQRES 34 A 468 ASN LYS ASP LEU LYS ILE LYS SER LEU VAL PHE GLN LEU SEQRES 35 A 468 PHE GLU ASN LYS THR THR THR LYS GLN GLN ILE ASP ASP SEQRES 36 A 468 LEU LEU LEU PRO GLY ASN THR ASN LEU PRO TRP THR SER HET FPP A 501 24 HET MG A 502 1 HET TAR A 503 10 HETNAM FPP FARNESYL DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM TAR D(-)-TARTARIC ACID FORMUL 2 FPP C15 H28 O7 P2 FORMUL 3 MG MG 2+ FORMUL 4 TAR C4 H6 O6 FORMUL 5 HOH *139(H2 O) HELIX 1 AA1 THR A -8 GLN A -2 1 7 HELIX 2 AA2 SER A 20 ASN A 24 5 5 HELIX 3 AA3 PRO A 55 SER A 58 5 4 HELIX 4 AA4 ILE A 65 GLU A 73 1 9 HELIX 5 AA5 ASP A 74 GLN A 85 1 12 HELIX 6 AA6 GLN A 86 GLY A 90 5 5 HELIX 7 AA7 SER A 92 ASP A 100 1 9 HELIX 8 AA8 PRO A 101 SER A 107 5 7 HELIX 9 AA9 HIS A 111 CYS A 126 1 16 HELIX 10 AB1 GLY A 147 GLY A 164 1 18 HELIX 11 AB2 SER A 176 GLY A 196 1 21 HELIX 12 AB3 GLY A 200 GLY A 209 1 10 HELIX 13 AB4 ASN A 224 ASN A 226 5 3 HELIX 14 AB5 SER A 249 GLU A 263 1 15 HELIX 15 AB6 PHE A 265 CYS A 293 1 29 HELIX 16 AB7 ASP A 297 GLY A 326 1 30 HELIX 17 AB8 HIS A 329 LEU A 342 1 14 HELIX 18 AB9 THR A 367 SER A 383 1 17 HELIX 19 AC1 SER A 400 ASN A 405 1 6 HELIX 20 AC2 ASP A 407 ASN A 420 1 14 HELIX 21 AC3 THR A 424 LEU A 433 1 10 SHEET 1 AA1 6 PHE A 59 SER A 64 0 SHEET 2 AA1 6 THR A 49 PHE A 54 -1 N PHE A 54 O PHE A 59 SHEET 3 AA1 6 ILE A 132 SER A 138 1 O PHE A 134 N ASP A 53 SHEET 4 AA1 6 ALA A 27 GLU A 43 -1 N TYR A 38 O LYS A 137 SHEET 5 AA1 6 ALA A 211 PHE A 214 -1 O LEU A 212 N ALA A 29 SHEET 6 AA1 6 PHE A 228 LEU A 231 -1 O LYS A 229 N LEU A 213 SHEET 1 AA2 6 PHE A 59 SER A 64 0 SHEET 2 AA2 6 THR A 49 PHE A 54 -1 N PHE A 54 O PHE A 59 SHEET 3 AA2 6 ILE A 132 SER A 138 1 O PHE A 134 N ASP A 53 SHEET 4 AA2 6 ALA A 27 GLU A 43 -1 N TYR A 38 O LYS A 137 SHEET 5 AA2 6 PHE A 5 PHE A 16 -1 N PHE A 5 O ILE A 41 SHEET 6 AA2 6 CYS A 397 LEU A 399 -1 O LEU A 399 N LEU A 6 SHEET 1 AA3 4 GLY A 345 THR A 350 0 SHEET 2 AA3 4 CYS A 357 LEU A 362 -1 O LEU A 359 N LYS A 348 SHEET 3 AA3 4 ILE A 237 TYR A 243 -1 N THR A 242 O SER A 358 SHEET 4 AA3 4 GLU A 385 LEU A 391 -1 O GLU A 385 N TYR A 243 LINK OG SER A 149 MG MG A 502 1555 1555 2.88 LINK O3A FPP A 501 MG MG A 502 1555 1555 2.63 LINK MG MG A 502 O HOH A 640 1555 1555 2.74 CISPEP 1 LEU A 3 PRO A 4 0 -1.07 CRYST1 83.450 83.450 262.880 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011983 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011983 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003804 0.00000 CONECT 1221 3473 CONECT 3449 3450 3451 CONECT 3450 3449 3465 CONECT 3451 3449 3452 CONECT 3452 3451 3453 3454 CONECT 3453 3452 CONECT 3454 3452 3455 CONECT 3455 3454 3456 CONECT 3456 3455 3457 CONECT 3457 3456 3458 3459 CONECT 3458 3457 CONECT 3459 3457 3460 CONECT 3460 3459 3461 CONECT 3461 3460 3462 CONECT 3462 3461 3463 3464 CONECT 3463 3462 CONECT 3464 3462 CONECT 3465 3450 3466 3467 3468 CONECT 3466 3465 CONECT 3467 3465 CONECT 3468 3465 3469 3473 CONECT 3469 3468 3470 3471 3472 CONECT 3470 3469 CONECT 3471 3469 CONECT 3472 3469 CONECT 3473 1221 3468 3523 CONECT 3474 3476 CONECT 3475 3476 CONECT 3476 3474 3475 3477 CONECT 3477 3476 3478 3479 CONECT 3478 3477 CONECT 3479 3477 3480 3481 CONECT 3480 3479 CONECT 3481 3479 3482 3483 CONECT 3482 3481 CONECT 3483 3481 CONECT 3523 3473 MASTER 405 0 3 21 16 0 0 6 3601 1 37 36 END