data_373D # _entry.id 373D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 373D WWPDB D_1000178842 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2003-09-23 _pdbx_database_PDB_obs_spr.pdb_id 413D _pdbx_database_PDB_obs_spr.replace_pdb_id 373D _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 373D _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 1998-01-13 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tanaka, Y.' 1 'Tomita, K.-I.' 2 'Sakata, T.' 3 'Hiroaki, H.' 4 'Tanaka, T.' 5 'Uesugi, S.' 6 'Kyogoku, Y.' 7 'Fujii, S.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;RNA Conformational Polymorphism: A'-RNA Conformation in the Crystal Structure of R(Ugagcuucggcuc) ; 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'Conformational Features of the Four Successive Non-Watson-Crick Base Pairs in RNA Duplex' 'Nucleic Acids Symp.Ser.' 27 63 ? 1992 NACSD8 UK 0261-3166 0559 ? ? ? 2 'Molecular Structure of Extraordinarily Stable RNA: Model Building and X-Ray Analysis' 'Nucleic Acids Symp.Ser.' 25 181 ? 1991 NACSD8 UK 0261-3166 0559 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tanaka, Y.' 1 primary 'Tomita, K.-I.' 2 primary 'Sakata, T.' 3 primary 'Hiroaki, H.' 4 primary 'Uesugi, S.' 5 primary 'Kyogoku, Y.' 6 primary 'Fujii, S.' 7 1 'Fujii, S.' 8 1 'Tanaka, Y.' 9 1 'Uesugi, S.' 10 1 'Tanaka, T.' 11 1 'Sakata, T.' 12 1 'Hiroaki, H.' 13 2 'Fujii, S.' 14 2 'Tanaka, Y.' 15 2 'Tomita, K.' 16 2 'Sakata, T.' 17 2 'Hiroaki, H.' 18 2 'Tanaka, T.' 19 2 'Uesugi, S.' 20 # _cell.entry_id 373D _cell.length_a 38.490 _cell.length_b 32.300 _cell.length_c 38.760 _cell.angle_alpha 90.00 _cell.angle_beta 117.56 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 373D _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 non-polymer syn ;RNA (5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3') ; 4173.434 1 ? ? ? ? 2 water nat water 18.015 49 ? ? ? ? # _struct_ref.id 1 _struct_ref.db_name NDB _struct_ref.db_code ARM0107 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 373D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession ARM0107 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 13 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 373D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 52.66 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 293.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AFC5R-FOS DIFFRACTOMETER' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1990-12-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 373D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10.0 _reflns.d_resolution_high 1.8 _reflns.number_obs 3556 _reflns.number_all ? _reflns.percent_possible_obs 88.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 0.0 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_netI_over_sigmaI ? # _refine.entry_id 373D _refine.ls_number_reflns_obs 2720 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs 68.0 _refine.ls_R_factor_obs 0.167 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.167 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'A SINGLE STRAND OF A-RNA, FIBER DIFFRACTION' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 373D _refine_analyze.Luzzati_coordinate_error_obs 0.2 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 288 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 337 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 8.0 _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.4 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.8 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work 265 _refine_ls_shell.R_factor_R_work 0.222 _refine_ls_shell.percent_reflns_obs 40.0 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 373D _struct.title ;A'-RNA CONFORMATION IN THE CRYSTAL STRUCTURE OF R(UGAGCUUCGGCUC) ; _struct.pdbx_descriptor "5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3'" _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 373D _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'A-RNA, DOUBLE HELIX, OVERHANGING BASE PAIR, RIBONUCLEIC ACID, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A G . N1 ? ? ? 1_555 A C . N3 ? ? A G 2 A C 13 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A G . N2 ? ? ? 1_555 A C . O2 ? ? A G 2 A C 13 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A G . O6 ? ? ? 1_555 A C . N4 ? ? A G 2 A C 13 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A A . N1 ? ? ? 1_555 A U . N3 ? ? A A 3 A U 12 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A A . N6 ? ? ? 1_555 A U . O4 ? ? A A 3 A U 12 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A G . N1 ? ? ? 1_555 A C . N3 ? ? A G 4 A C 11 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A G . N2 ? ? ? 1_555 A C . O2 ? ? A G 4 A C 11 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A G . O6 ? ? ? 1_555 A C . N4 ? ? A G 4 A C 11 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A C . N3 ? ? ? 1_555 A G . N1 ? ? A C 5 A G 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A C . N4 ? ? ? 1_555 A G . O6 ? ? A C 5 A G 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A C . O2 ? ? ? 1_555 A G . N2 ? ? A C 5 A G 10 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A U . N3 ? ? ? 1_555 A G . O6 ? ? A U 6 A G 9 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog13 hydrog ? ? A U . O2 ? ? ? 1_555 A G . N1 ? ? A U 6 A G 9 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog14 hydrog ? ? A U . O4 ? ? ? 1_555 A C . N4 ? ? A U 7 A C 8 2_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? hydrog15 hydrog ? ? A C . N4 ? ? ? 1_555 A U . O4 ? ? A C 8 A U 7 2_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? hydrog16 hydrog ? ? A G . N1 ? ? ? 1_555 A U . O2 ? ? A G 9 A U 6 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog17 hydrog ? ? A G . O6 ? ? ? 1_555 A U . N3 ? ? A G 9 A U 6 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog18 hydrog ? ? A G . N1 ? ? ? 1_555 A C . N3 ? ? A G 10 A C 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A G . N2 ? ? ? 1_555 A C . O2 ? ? A G 10 A C 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A G . O6 ? ? ? 1_555 A C . N4 ? ? A G 10 A C 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A C . N3 ? ? ? 1_555 A G . N1 ? ? A C 11 A G 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A C . N4 ? ? ? 1_555 A G . O6 ? ? A C 11 A G 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A C . O2 ? ? ? 1_555 A G . N2 ? ? A C 11 A G 4 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A U . N3 ? ? ? 1_555 A A . N1 ? ? A U 12 A A 3 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A U . O4 ? ? ? 1_555 A A . N6 ? ? A U 12 A A 3 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A C . N3 ? ? ? 1_555 A G . N1 ? ? A C 13 A G 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? A C . N4 ? ? ? 1_555 A G . O6 ? ? A C 13 A G 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? A C . O2 ? ? ? 1_555 A G . N2 ? ? A C 13 A G 2 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 373D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 373D _atom_sites.fract_transf_matrix[1][1] 0.025981 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.013559 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030960 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.029102 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code A 1 U 1 1 1 U U A . A 1 G 2 2 2 G G A . A 1 A 3 3 3 A A A . A 1 G 4 4 4 G G A . A 1 C 5 5 5 C C A . A 1 U 6 6 6 U U A . A 1 U 7 7 7 U U A . A 1 C 8 8 8 C C A . A 1 G 9 9 9 G G A . A 1 G 10 10 10 G G A . A 1 C 11 11 11 C C A . A 1 U 12 12 12 U U A . A 1 C 13 13 13 C C A . B 2 HOH 1 14 14 HOH HOH A . B 2 HOH 2 15 15 HOH HOH A . B 2 HOH 3 16 16 HOH HOH A . B 2 HOH 4 17 17 HOH HOH A . B 2 HOH 5 18 18 HOH HOH A . B 2 HOH 6 19 19 HOH HOH A . B 2 HOH 7 20 20 HOH HOH A . B 2 HOH 8 21 21 HOH HOH A . B 2 HOH 9 22 22 HOH HOH A . B 2 HOH 10 23 23 HOH HOH A . B 2 HOH 11 24 24 HOH HOH A . B 2 HOH 12 25 25 HOH HOH A . B 2 HOH 13 26 26 HOH HOH A . B 2 HOH 14 27 27 HOH HOH A . B 2 HOH 15 28 28 HOH HOH A . B 2 HOH 16 29 29 HOH HOH A . B 2 HOH 17 30 30 HOH HOH A . B 2 HOH 18 31 31 HOH HOH A . B 2 HOH 19 32 32 HOH HOH A . B 2 HOH 20 33 33 HOH HOH A . B 2 HOH 21 34 34 HOH HOH A . B 2 HOH 22 35 35 HOH HOH A . B 2 HOH 23 36 36 HOH HOH A . B 2 HOH 24 37 37 HOH HOH A . B 2 HOH 25 38 38 HOH HOH A . B 2 HOH 26 39 39 HOH HOH A . B 2 HOH 27 40 40 HOH HOH A . B 2 HOH 28 41 41 HOH HOH A . B 2 HOH 29 42 42 HOH HOH A . B 2 HOH 30 43 43 HOH HOH A . B 2 HOH 31 44 44 HOH HOH A . B 2 HOH 32 45 45 HOH HOH A . B 2 HOH 33 46 46 HOH HOH A . B 2 HOH 34 47 47 HOH HOH A . B 2 HOH 35 48 48 HOH HOH A . B 2 HOH 36 49 49 HOH HOH A . B 2 HOH 37 50 50 HOH HOH A . B 2 HOH 38 51 51 HOH HOH A . B 2 HOH 39 52 52 HOH HOH A . B 2 HOH 40 53 53 HOH HOH A . B 2 HOH 41 54 54 HOH HOH A . B 2 HOH 42 55 55 HOH HOH A . B 2 HOH 43 56 56 HOH HOH A . B 2 HOH 44 57 57 HOH HOH A . B 2 HOH 45 58 58 HOH HOH A . B 2 HOH 46 59 59 HOH HOH A . B 2 HOH 47 60 60 HOH HOH A . B 2 HOH 48 61 61 HOH HOH A . B 2 HOH 49 62 62 HOH HOH A . # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id U _pdbx_struct_special_symmetry.auth_seq_id 1 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id A _pdbx_struct_special_symmetry.label_comp_id U _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-02-25 2 'Structure model' 1 1 2003-09-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O3* A C 11 ? ? P A U 12 ? ? 1.56 2 1 O3* A U 6 ? ? P A U 7 ? ? 1.57 3 1 O3* A G 4 ? ? P A C 5 ? ? 1.57 4 1 O3* A C 5 ? ? P A U 6 ? ? 1.57 5 1 O3* A A 3 ? ? P A G 4 ? ? 1.58 6 1 O3* A U 12 ? ? P A C 13 ? ? 1.58 7 1 O3* A G 10 ? ? P A C 11 ? ? 1.58 8 1 O3* A G 2 ? ? P A A 3 ? ? 1.58 9 1 O3* A G 9 ? ? P A G 10 ? ? 1.59 10 1 O3* A C 8 ? ? P A G 9 ? ? 1.60 11 1 O3* A U 7 ? ? P A C 8 ? ? 1.61 12 1 O3* A U 1 ? B P A G 2 ? ? 1.62 13 1 O3* A U 1 ? A P A G 2 ? ? 1.64 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A U 1 ? OP3 ? A U 1 OP3 2 1 N 1 A U 1 ? P ? A U 1 P 3 1 N 1 A U 1 ? OP1 ? A U 1 OP1 4 1 N 1 A U 1 ? OP2 ? A U 1 OP2 5 1 N 1 A U 1 ? "O5'" ? A U 1 "O5'" 6 1 N 1 A U 1 ? "C5'" ? A U 1 "C5'" 7 1 N 1 A U 1 ? "C4'" ? A U 1 "C4'" 8 1 N 1 A U 1 ? "O4'" ? A U 1 "O4'" 9 1 N 1 A U 1 ? "C3'" ? A U 1 "C3'" 10 1 N 1 A U 1 ? "O3'" ? A U 1 "O3'" 11 1 N 1 A U 1 ? "C2'" ? A U 1 "C2'" 12 1 N 1 A U 1 ? "O2'" ? A U 1 "O2'" 13 1 N 1 A U 1 ? "C1'" ? A U 1 "C1'" 14 1 N 1 A G 2 ? OP3 ? A G 2 OP3 15 1 N 1 A G 2 ? OP1 ? A G 2 OP1 16 1 N 1 A G 2 ? OP2 ? A G 2 OP2 17 1 N 1 A G 2 ? "O5'" ? A G 2 "O5'" 18 1 N 1 A G 2 ? "C5'" ? A G 2 "C5'" 19 1 N 1 A G 2 ? "C4'" ? A G 2 "C4'" 20 1 N 1 A G 2 ? "O4'" ? A G 2 "O4'" 21 1 N 1 A G 2 ? "C3'" ? A G 2 "C3'" 22 1 N 1 A G 2 ? "O3'" ? A G 2 "O3'" 23 1 N 1 A G 2 ? "C2'" ? A G 2 "C2'" 24 1 N 1 A G 2 ? "O2'" ? A G 2 "O2'" 25 1 N 1 A G 2 ? "C1'" ? A G 2 "C1'" 26 1 N 1 A A 3 ? OP3 ? A A 3 OP3 27 1 N 1 A A 3 ? OP1 ? A A 3 OP1 28 1 N 1 A A 3 ? OP2 ? A A 3 OP2 29 1 N 1 A A 3 ? "O5'" ? A A 3 "O5'" 30 1 N 1 A A 3 ? "C5'" ? A A 3 "C5'" 31 1 N 1 A A 3 ? "C4'" ? A A 3 "C4'" 32 1 N 1 A A 3 ? "O4'" ? A A 3 "O4'" 33 1 N 1 A A 3 ? "C3'" ? A A 3 "C3'" 34 1 N 1 A A 3 ? "O3'" ? A A 3 "O3'" 35 1 N 1 A A 3 ? "C2'" ? A A 3 "C2'" 36 1 N 1 A A 3 ? "O2'" ? A A 3 "O2'" 37 1 N 1 A A 3 ? "C1'" ? A A 3 "C1'" 38 1 N 1 A G 4 ? OP3 ? A G 4 OP3 39 1 N 1 A G 4 ? OP1 ? A G 4 OP1 40 1 N 1 A G 4 ? OP2 ? A G 4 OP2 41 1 N 1 A G 4 ? "O5'" ? A G 4 "O5'" 42 1 N 1 A G 4 ? "C5'" ? A G 4 "C5'" 43 1 N 1 A G 4 ? "C4'" ? A G 4 "C4'" 44 1 N 1 A G 4 ? "O4'" ? A G 4 "O4'" 45 1 N 1 A G 4 ? "C3'" ? A G 4 "C3'" 46 1 N 1 A G 4 ? "O3'" ? A G 4 "O3'" 47 1 N 1 A G 4 ? "C2'" ? A G 4 "C2'" 48 1 N 1 A G 4 ? "O2'" ? A G 4 "O2'" 49 1 N 1 A G 4 ? "C1'" ? A G 4 "C1'" 50 1 N 1 A C 5 ? OP3 ? A C 5 OP3 51 1 N 1 A C 5 ? OP1 ? A C 5 OP1 52 1 N 1 A C 5 ? OP2 ? A C 5 OP2 53 1 N 1 A C 5 ? "O5'" ? A C 5 "O5'" 54 1 N 1 A C 5 ? "C5'" ? A C 5 "C5'" 55 1 N 1 A C 5 ? "C4'" ? A C 5 "C4'" 56 1 N 1 A C 5 ? "O4'" ? A C 5 "O4'" 57 1 N 1 A C 5 ? "C3'" ? A C 5 "C3'" 58 1 N 1 A C 5 ? "O3'" ? A C 5 "O3'" 59 1 N 1 A C 5 ? "C2'" ? A C 5 "C2'" 60 1 N 1 A C 5 ? "O2'" ? A C 5 "O2'" 61 1 N 1 A C 5 ? "C1'" ? A C 5 "C1'" 62 1 N 1 A U 6 ? OP3 ? A U 6 OP3 63 1 N 1 A U 6 ? OP1 ? A U 6 OP1 64 1 N 1 A U 6 ? OP2 ? A U 6 OP2 65 1 N 1 A U 6 ? "O5'" ? A U 6 "O5'" 66 1 N 1 A U 6 ? "C5'" ? A U 6 "C5'" 67 1 N 1 A U 6 ? "C4'" ? A U 6 "C4'" 68 1 N 1 A U 6 ? "O4'" ? A U 6 "O4'" 69 1 N 1 A U 6 ? "C3'" ? A U 6 "C3'" 70 1 N 1 A U 6 ? "O3'" ? A U 6 "O3'" 71 1 N 1 A U 6 ? "C2'" ? A U 6 "C2'" 72 1 N 1 A U 6 ? "O2'" ? A U 6 "O2'" 73 1 N 1 A U 6 ? "C1'" ? A U 6 "C1'" 74 1 N 1 A U 7 ? OP3 ? A U 7 OP3 75 1 N 1 A U 7 ? OP1 ? A U 7 OP1 76 1 N 1 A U 7 ? OP2 ? A U 7 OP2 77 1 N 1 A U 7 ? "O5'" ? A U 7 "O5'" 78 1 N 1 A U 7 ? "C5'" ? A U 7 "C5'" 79 1 N 1 A U 7 ? "C4'" ? A U 7 "C4'" 80 1 N 1 A U 7 ? "O4'" ? A U 7 "O4'" 81 1 N 1 A U 7 ? "C3'" ? A U 7 "C3'" 82 1 N 1 A U 7 ? "O3'" ? A U 7 "O3'" 83 1 N 1 A U 7 ? "C2'" ? A U 7 "C2'" 84 1 N 1 A U 7 ? "O2'" ? A U 7 "O2'" 85 1 N 1 A U 7 ? "C1'" ? A U 7 "C1'" 86 1 N 1 A C 8 ? OP3 ? A C 8 OP3 87 1 N 1 A C 8 ? OP1 ? A C 8 OP1 88 1 N 1 A C 8 ? OP2 ? A C 8 OP2 89 1 N 1 A C 8 ? "O5'" ? A C 8 "O5'" 90 1 N 1 A C 8 ? "C5'" ? A C 8 "C5'" 91 1 N 1 A C 8 ? "C4'" ? A C 8 "C4'" 92 1 N 1 A C 8 ? "O4'" ? A C 8 "O4'" 93 1 N 1 A C 8 ? "C3'" ? A C 8 "C3'" 94 1 N 1 A C 8 ? "O3'" ? A C 8 "O3'" 95 1 N 1 A C 8 ? "C2'" ? A C 8 "C2'" 96 1 N 1 A C 8 ? "O2'" ? A C 8 "O2'" 97 1 N 1 A C 8 ? "C1'" ? A C 8 "C1'" 98 1 N 1 A G 9 ? OP3 ? A G 9 OP3 99 1 N 1 A G 9 ? OP1 ? A G 9 OP1 100 1 N 1 A G 9 ? OP2 ? A G 9 OP2 101 1 N 1 A G 9 ? "O5'" ? A G 9 "O5'" 102 1 N 1 A G 9 ? "C5'" ? A G 9 "C5'" 103 1 N 1 A G 9 ? "C4'" ? A G 9 "C4'" 104 1 N 1 A G 9 ? "O4'" ? A G 9 "O4'" 105 1 N 1 A G 9 ? "C3'" ? A G 9 "C3'" 106 1 N 1 A G 9 ? "O3'" ? A G 9 "O3'" 107 1 N 1 A G 9 ? "C2'" ? A G 9 "C2'" 108 1 N 1 A G 9 ? "O2'" ? A G 9 "O2'" 109 1 N 1 A G 9 ? "C1'" ? A G 9 "C1'" 110 1 N 1 A G 10 ? OP3 ? A G 10 OP3 111 1 N 1 A G 10 ? OP1 ? A G 10 OP1 112 1 N 1 A G 10 ? OP2 ? A G 10 OP2 113 1 N 1 A G 10 ? "O5'" ? A G 10 "O5'" 114 1 N 1 A G 10 ? "C5'" ? A G 10 "C5'" 115 1 N 1 A G 10 ? "C4'" ? A G 10 "C4'" 116 1 N 1 A G 10 ? "O4'" ? A G 10 "O4'" 117 1 N 1 A G 10 ? "C3'" ? A G 10 "C3'" 118 1 N 1 A G 10 ? "O3'" ? A G 10 "O3'" 119 1 N 1 A G 10 ? "C2'" ? A G 10 "C2'" 120 1 N 1 A G 10 ? "O2'" ? A G 10 "O2'" 121 1 N 1 A G 10 ? "C1'" ? A G 10 "C1'" 122 1 N 1 A C 11 ? OP3 ? A C 11 OP3 123 1 N 1 A C 11 ? OP1 ? A C 11 OP1 124 1 N 1 A C 11 ? OP2 ? A C 11 OP2 125 1 N 1 A C 11 ? "O5'" ? A C 11 "O5'" 126 1 N 1 A C 11 ? "C5'" ? A C 11 "C5'" 127 1 N 1 A C 11 ? "C4'" ? A C 11 "C4'" 128 1 N 1 A C 11 ? "O4'" ? A C 11 "O4'" 129 1 N 1 A C 11 ? "C3'" ? A C 11 "C3'" 130 1 N 1 A C 11 ? "O3'" ? A C 11 "O3'" 131 1 N 1 A C 11 ? "C2'" ? A C 11 "C2'" 132 1 N 1 A C 11 ? "O2'" ? A C 11 "O2'" 133 1 N 1 A C 11 ? "C1'" ? A C 11 "C1'" 134 1 N 1 A U 12 ? OP3 ? A U 12 OP3 135 1 N 1 A U 12 ? OP1 ? A U 12 OP1 136 1 N 1 A U 12 ? OP2 ? A U 12 OP2 137 1 N 1 A U 12 ? "O5'" ? A U 12 "O5'" 138 1 N 1 A U 12 ? "C5'" ? A U 12 "C5'" 139 1 N 1 A U 12 ? "C4'" ? A U 12 "C4'" 140 1 N 1 A U 12 ? "O4'" ? A U 12 "O4'" 141 1 N 1 A U 12 ? "C3'" ? A U 12 "C3'" 142 1 N 1 A U 12 ? "O3'" ? A U 12 "O3'" 143 1 N 1 A U 12 ? "C2'" ? A U 12 "C2'" 144 1 N 1 A U 12 ? "O2'" ? A U 12 "O2'" 145 1 N 1 A U 12 ? "C1'" ? A U 12 "C1'" 146 1 N 1 A C 13 ? OP3 ? A C 13 OP3 147 1 N 1 A C 13 ? OP1 ? A C 13 OP1 148 1 N 1 A C 13 ? OP2 ? A C 13 OP2 149 1 N 1 A C 13 ? "O5'" ? A C 13 "O5'" 150 1 N 1 A C 13 ? "C5'" ? A C 13 "C5'" 151 1 N 1 A C 13 ? "C4'" ? A C 13 "C4'" 152 1 N 1 A C 13 ? "O4'" ? A C 13 "O4'" 153 1 N 1 A C 13 ? "C3'" ? A C 13 "C3'" 154 1 N 1 A C 13 ? "O3'" ? A C 13 "O3'" 155 1 N 1 A C 13 ? "C2'" ? A C 13 "C2'" 156 1 N 1 A C 13 ? "O2'" ? A C 13 "O2'" 157 1 N 1 A C 13 ? "C1'" ? A C 13 "C1'" # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 373D 'double helix' 373D 'a-form double helix' 373D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G . 1_555 A C . 2_555 -0.328 -0.210 -0.252 -3.986 0.000 0.579 1 A_G2:C13_A A 2 ? A 13 ? 19 1 1 A A . 1_555 A U . 2_555 -0.129 -0.203 -0.307 -1.721 0.000 6.632 2 A_A3:U12_A A 3 ? A 12 ? 20 1 1 A G . 1_555 A C . 2_555 -0.211 -0.124 -0.434 -3.881 0.000 -0.165 3 A_G4:C11_A A 4 ? A 11 ? 19 1 1 A C . 1_555 A G . 2_555 0.338 -0.258 -0.068 2.639 0.000 -0.742 4 A_C5:G10_A A 5 ? A 10 ? 19 1 1 A U . 1_555 A G . 2_555 2.402 -0.544 -0.119 -5.662 0.000 -0.162 5 A_U6:G9_A A 6 ? A 9 ? 28 ? 1 A U . 1_555 A C . 2_555 -0.578 0.055 0.167 -8.048 0.000 -38.995 6 A_U7:C8_A A 7 ? A 8 ? ? ? 1 A C . 1_555 A U . 2_555 0.578 0.055 0.167 8.048 0.000 -38.995 7 A_C8:U7_A A 8 ? A 7 ? ? ? 1 A G . 1_555 A U . 2_555 -2.402 -0.544 -0.119 5.662 0.000 -0.162 8 A_G9:U6_A A 9 ? A 6 ? 28 ? 1 A G . 1_555 A C . 2_555 -0.338 -0.258 -0.068 -2.639 0.000 -0.742 9 A_G10:C5_A A 10 ? A 5 ? 19 1 1 A C . 1_555 A G . 2_555 0.211 -0.124 -0.434 3.881 0.000 -0.165 10 A_C11:G4_A A 11 ? A 4 ? 19 1 1 A U . 1_555 A A . 2_555 0.129 -0.203 -0.307 1.721 0.000 6.632 11 A_U12:A3_A A 12 ? A 3 ? 20 1 1 A C . 1_555 A G . 2_555 0.328 -0.210 -0.252 3.986 0.000 0.579 12 A_C13:G2_A A 13 ? A 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G . 1_555 A C . 2_555 A A . 1_555 A U . 2_555 -0.141 -1.552 3.325 0.441 6.302 30.956 -3.987 0.339 2.957 11.655 -0.815 31.579 1 AA_G2A3:U12C13_AA A 2 ? A 13 ? A 3 ? A 12 ? 1 A A . 1_555 A U . 2_555 A G . 1_555 A C . 2_555 -0.560 -1.371 3.420 -0.185 7.671 30.493 -3.965 1.000 2.998 14.302 0.345 31.422 2 AA_A3G4:C11U12_AA A 3 ? A 12 ? A 4 ? A 11 ? 1 A G . 1_555 A C . 2_555 A C . 1_555 A G . 2_555 0.745 -2.259 3.200 -1.527 4.040 26.856 -5.739 -1.938 2.790 8.627 3.261 27.195 3 AA_G4C5:G10C11_AA A 4 ? A 11 ? A 5 ? A 10 ? 1 A C . 1_555 A G . 2_555 A U . 1_555 A G . 2_555 0.518 -2.116 3.456 4.212 5.791 42.531 -3.464 -0.280 3.190 7.916 -5.757 43.102 4 AA_C5U6:G9G10_AA A 5 ? A 10 ? A 6 ? A 9 ? 1 A U . 1_555 A G . 2_555 A U . 1_555 A C . 2_555 -3.339 -2.256 3.421 2.185 9.732 20.015 -8.870 9.303 1.773 26.016 -5.840 22.339 5 AA_U6U7:C8G9_AA A 6 ? A 9 ? A 7 ? A 8 ? 1 A U . 1_555 A C . 2_555 A C . 1_555 A U . 2_555 0.000 -1.826 3.261 0.000 2.950 33.656 -3.608 0.000 3.094 5.083 0.000 33.781 6 AA_U7C8:U7C8_AA A 7 ? A 8 ? A 8 ? A 7 ? 1 A C . 1_555 A U . 2_555 A G . 1_555 A U . 2_555 3.339 -2.256 3.421 -2.185 9.732 20.015 -8.870 -9.303 1.773 26.016 5.840 22.339 7 AA_C8G9:U6U7_AA A 8 ? A 7 ? A 9 ? A 6 ? 1 A G . 1_555 A U . 2_555 A G . 1_555 A C . 2_555 -0.518 -2.116 3.456 -4.212 5.791 42.531 -3.464 0.280 3.190 7.915 5.757 43.102 8 AA_G9G10:C5U6_AA A 9 ? A 6 ? A 10 ? A 5 ? 1 A G . 1_555 A C . 2_555 A C . 1_555 A G . 2_555 -0.745 -2.259 3.200 1.527 4.040 26.856 -5.739 1.938 2.790 8.627 -3.261 27.195 9 AA_G10C11:G4C5_AA A 10 ? A 5 ? A 11 ? A 4 ? 1 A C . 1_555 A G . 2_555 A U . 1_555 A A . 2_555 0.560 -1.371 3.420 0.185 7.671 30.493 -3.965 -1.000 2.998 14.302 -0.345 31.422 10 AA_C11U12:A3G4_AA A 11 ? A 4 ? A 12 ? A 3 ? 1 A U . 1_555 A A . 2_555 A C . 1_555 A G . 2_555 0.141 -1.552 3.325 -0.441 6.302 30.956 -3.987 -0.339 2.957 11.655 0.815 31.579 11 AA_U12C13:G2A3_AA A 12 ? A 3 ? A 13 ? A 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 1 ;RNA (5'-R(*UP*GP*AP*GP*CP*UP*UP*CP*GP*GP*CP*UP*C)-3') ; U 2 water HOH #