HEADER DNA BINDING PROTEIN 28-JUL-26 37NN TITLE CRYSTAL STRUCTURE OF THE R. DENITRIFICANS GAPR BOUND TO 10MER DNA TITLE 2 DUPLEX (DNA VISIBLE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAPR; COMPND 3 CHAIN: A, B, D, E, G, H, I, J; COMPND 4 SYNONYM: UPF0335 PROTEIN RD1_2835; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*TP*AP*AP*TP*TP*AP*AP*TP*TP*A)-3'); COMPND 8 CHAIN: W, Z, T, X; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROSEOBACTER DENITRIFICANS; SOURCE 3 ORGANISM_TAXID: 2434; SOURCE 4 GENE: RD1_2835; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630 KEYWDS NUCLEOID ASSOCIATED PROTEIN, NAP, GAPR, R. DENITRIFICANS, PHAGE, KEYWDS 2 PHAGE GAPR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER REVDAT 1 30-SEP-26 37NN 0 JRNL AUTH M.A.SCHUMACHER JRNL TITL CRYSTAL STRUCTURE OF THE R. DENITRIFICANS GAPR BOUND TO JRNL TITL 2 10MER DNA DUPLEX (DNA VISIBLE) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 8022 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.262 REMARK 3 R VALUE (WORKING SET) : 0.259 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.070 REMARK 3 FREE R VALUE TEST SET COUNT : 808 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8200 - 6.8100 0.99 1224 141 0.2160 0.2682 REMARK 3 2 6.8100 - 5.4100 0.98 1226 137 0.3108 0.3282 REMARK 3 3 5.4100 - 4.7200 0.99 1249 127 0.2548 0.2583 REMARK 3 4 4.7200 - 4.2900 0.98 1228 141 0.2414 0.2792 REMARK 3 5 4.2900 - 3.9900 0.97 1180 136 0.2672 0.2849 REMARK 3 6 3.9800 - 3.7500 0.86 1107 126 0.3572 0.3642 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.510 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5703 REMARK 3 ANGLE : 0.886 7779 REMARK 3 CHIRALITY : 0.045 867 REMARK 3 PLANARITY : 0.014 886 REMARK 3 DIHEDRAL : 22.360 2307 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -16.4440 -5.8583 56.7393 REMARK 3 T TENSOR REMARK 3 T11: 0.7721 T22: 0.5211 REMARK 3 T33: 0.4554 T12: 0.0543 REMARK 3 T13: -0.0612 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 0.0986 L22: 0.3671 REMARK 3 L33: 0.0432 L12: 0.0514 REMARK 3 L13: -0.1266 L23: 0.0080 REMARK 3 S TENSOR REMARK 3 S11: -0.0700 S12: -0.0698 S13: -0.0114 REMARK 3 S21: 0.2078 S22: 0.0201 S23: -0.0889 REMARK 3 S31: 0.0302 S32: -0.0660 S33: 0.0417 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 37NN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-26. REMARK 100 THE DEPOSITION ID IS D_1000310368. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-26 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8022 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.750 REMARK 200 RESOLUTION RANGE LOW (A) : 45.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.98 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (V/V) PEG 2000 MME, 100 MM SODIUM REMARK 280 ACETATE PH 5.5, 200 MM AMMONIUM SULPHATE, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, E, T, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J, W, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 HIS A 24 REMARK 465 MET A 25 REMARK 465 LYS A 26 REMARK 465 GLY B 22 REMARK 465 SER B 23 REMARK 465 HIS B 24 REMARK 465 MET B 25 REMARK 465 GLY D 22 REMARK 465 SER D 23 REMARK 465 HIS D 24 REMARK 465 MET D 25 REMARK 465 GLY E 22 REMARK 465 SER E 23 REMARK 465 HIS E 24 REMARK 465 MET E 25 REMARK 465 LYS E 26 REMARK 465 GLY G 22 REMARK 465 SER G 23 REMARK 465 HIS G 24 REMARK 465 MET G 25 REMARK 465 GLY H 22 REMARK 465 SER H 23 REMARK 465 HIS H 24 REMARK 465 MET H 25 REMARK 465 GLY I 22 REMARK 465 SER I 23 REMARK 465 HIS I 24 REMARK 465 MET I 25 REMARK 465 LYS I 26 REMARK 465 GLY J 22 REMARK 465 SER J 23 REMARK 465 HIS J 24 REMARK 465 MET J 25 REMARK 465 LYS J 26 REMARK 465 DA Z 24 REMARK 465 DT T 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLN A 72 CG CD OE1 NE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 ASP A 82 CG OD1 OD2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 LYS D 26 CB CG CD CE NZ REMARK 470 GLU D 45 CG CD OE1 OE2 REMARK 470 ARG D 63 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 72 CG CD OE1 NE2 REMARK 470 LYS E 47 CG CD CE NZ REMARK 470 ASN E 75 CG OD1 ND2 REMARK 470 LYS E 81 CG CD CE NZ REMARK 470 LYS G 26 CG CD CE NZ REMARK 470 GLU G 55 CG CD OE1 OE2 REMARK 470 LYS G 61 CG CD CE NZ REMARK 470 LYS G 68 CG CD CE NZ REMARK 470 LYS H 26 CG CD CE NZ REMARK 470 LYS H 47 CG CD CE NZ REMARK 470 GLU H 59 CG CD OE1 OE2 REMARK 470 LYS H 78 CG CD CE NZ REMARK 470 LYS H 81 CG CD CE NZ REMARK 470 LYS I 68 CG CD CE NZ REMARK 470 LYS I 81 CG CD CE NZ REMARK 470 GLU J 55 CG CD OE1 OE2 REMARK 470 LYS J 68 CG CD CE NZ REMARK 470 GLN J 72 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU G 31 CD GLU G 31 OE2 0.076 REMARK 500 DA T 10 N3 DA T 10 C4 -0.042 REMARK 500 DT X 18 O3' DT X 18 C3' -0.057 REMARK 500 DA X 21 O3' DA X 21 C3' -0.056 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT X 18 C1' - O4' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 DT X 18 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DT X 18 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 DT X 19 C1' - O4' - C4' ANGL. DEV. = -7.5 DEGREES REMARK 500 DT X 19 C3' - C2' - C1' ANGL. DEV. = -6.5 DEGREES REMARK 500 DT X 19 O4' - C1' - N1 ANGL. DEV. = 6.4 DEGREES REMARK 500 DT X 22 O4' - C1' - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DT X 23 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA J 29 -61.34 -93.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 54 0.22 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH I 204 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH I 205 DISTANCE = 7.98 ANGSTROMS REMARK 525 HOH W 101 DISTANCE = 6.15 ANGSTROMS DBREF 37NN A 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN B 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN D 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN E 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN G 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN H 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN I 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN J 26 100 UNP Q165I2 Q165I2_ROSDO 26 100 DBREF 37NN W 1 10 PDB 37NN 37NN 1 10 DBREF 37NN Z 15 24 PDB 37NN 37NN 15 24 DBREF 37NN T 1 10 PDB 37NN 37NN 1 10 DBREF 37NN X 15 24 PDB 37NN 37NN 15 24 SEQADV 37NN GLY A 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER A 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS A 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET A 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY B 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER B 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS B 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET B 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY D 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER D 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS D 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET D 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY E 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER E 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS E 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET E 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY G 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER G 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS G 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET G 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY H 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER H 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS H 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET H 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY I 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER I 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS I 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET I 25 UNP Q165I2 EXPRESSION TAG SEQADV 37NN GLY J 22 UNP Q165I2 EXPRESSION TAG SEQADV 37NN SER J 23 UNP Q165I2 EXPRESSION TAG SEQADV 37NN HIS J 24 UNP Q165I2 EXPRESSION TAG SEQADV 37NN MET J 25 UNP Q165I2 EXPRESSION TAG SEQRES 1 A 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 A 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 A 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 A 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 A 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 A 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 A 79 MET SEQRES 1 B 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 B 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 B 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 B 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 B 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 B 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 B 79 MET SEQRES 1 D 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 D 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 D 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 D 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 D 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 D 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 D 79 MET SEQRES 1 E 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 E 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 E 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 E 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 E 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 E 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 E 79 MET SEQRES 1 G 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 G 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 G 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 G 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 G 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 G 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 G 79 MET SEQRES 1 H 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 H 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 H 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 H 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 H 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 H 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 H 79 MET SEQRES 1 I 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 I 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 I 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 I 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 I 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 I 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 I 79 MET SEQRES 1 J 79 GLY SER HIS MET LYS VAL THR ALA GLY GLU LEU ARG GLN SEQRES 2 J 79 PHE VAL GLU ARG ILE GLU ARG LEU GLU SER GLU LYS LYS SEQRES 3 J 79 ASP ILE ALA GLU GLN ILE ARG GLU VAL TYR ALA GLU THR SEQRES 4 J 79 LYS SER ARG GLY TYR ASP THR LYS CYS LEU ARG GLN ILE SEQRES 5 J 79 VAL ASN MET ARG LYS ARG ASP LYS ASP ASP ILE ALA GLU SEQRES 6 J 79 GLU GLU ALA VAL LEU GLU MET TYR LYS GLU ALA LEU GLY SEQRES 7 J 79 MET SEQRES 1 W 10 DT DA DA DT DT DA DA DT DT DA SEQRES 1 Z 10 DT DA DA DT DT DA DA DT DT DA SEQRES 1 T 10 DT DA DA DT DT DA DA DT DT DA SEQRES 1 X 10 DT DA DA DT DT DA DA DT DT DA HET SO4 H 201 5 HETNAM SO4 SULFATE ION FORMUL 13 SO4 O4 S 2- FORMUL 14 HOH *43(H2 O) HELIX 1 AA1 THR A 28 SER A 62 1 35 HELIX 2 AA2 ASP A 66 ARG A 79 1 14 HELIX 3 AA3 ASP A 80 LEU A 98 1 19 HELIX 4 AA4 GLY B 30 ARG B 63 1 34 HELIX 5 AA5 ASP B 66 ARG B 79 1 14 HELIX 6 AA6 ASP B 80 GLY B 99 1 20 HELIX 7 AA7 THR D 28 SER D 62 1 35 HELIX 8 AA8 ASP D 66 ARG D 79 1 14 HELIX 9 AA9 ASP D 82 GLY D 99 1 18 HELIX 10 AB1 THR E 28 GLY E 64 1 37 HELIX 11 AB2 ASP E 66 LYS E 78 1 13 HELIX 12 AB3 ASP E 82 LEU E 98 1 17 HELIX 13 AB4 THR G 28 ARG G 63 1 36 HELIX 14 AB5 ASP G 66 ARG G 79 1 14 HELIX 15 AB6 ASP G 80 LEU G 98 1 19 HELIX 16 AB7 THR H 28 SER H 62 1 35 HELIX 17 AB8 ASP H 66 ARG H 79 1 14 HELIX 18 AB9 ALA H 89 LEU H 98 1 10 HELIX 19 AC1 THR I 28 ARG I 63 1 36 HELIX 20 AC2 ASP I 66 ARG I 79 1 14 HELIX 21 AC3 ASP I 80 GLU I 86 1 7 HELIX 22 AC4 GLU I 88 LEU I 98 1 11 HELIX 23 AC5 GLU J 31 GLY J 64 1 34 HELIX 24 AC6 ASP J 66 ARG J 79 1 14 HELIX 25 AC7 ASP J 80 GLY J 99 1 20 CRYST1 35.358 49.584 119.903 90.03 93.08 92.36 P 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028282 0.001166 0.001525 0.00000 SCALE2 0.000000 0.020185 0.000055 0.00000 SCALE3 0.000000 0.000000 0.008352 0.00000 CONECT 5592 5593 5594 5595 5596 CONECT 5593 5592 CONECT 5594 5592 CONECT 5595 5592 CONECT 5596 5592 MASTER 389 0 1 25 0 0 0 6 5627 12 5 60 END