HEADER DE NOVO PROTEIN 30-AUG-26 38JM TITLE SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED TAU PEPTIDE BINDING PROTEIN TITLE 2 TBPHF6-11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TBPHF6-11 PROTEIN; COMPND 3 CHAIN: X; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TAU, AMYLOID, DE NOVO PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR A.C.MCSHAN,M.K.SIMMA,H.L.HAN,D.BAKER,D.SAHTOE,C.LIU REVDAT 1 09-SEP-26 38JM 0 JRNL AUTH A.C.MCSHAN,M.K.SIMMA,D.BAKER,H.L.HAN,D.SAHTOE,C.LIU JRNL TITL DESIGNED BINDERS TARGET TAU FOR THERAPEUTIC MODULATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GROMACS REMARK 3 AUTHORS : LINDAHL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 38JM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-26. REMARK 100 THE DEPOSITION ID IS D_1000311399. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 590 UM [U-100% 13C; U-100% 15N] REMARK 210 TBPHF6-11, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HNCACB; 3D HNCO; 3D CBCA(CO)NH; REMARK 210 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRFAM-SPARKY, ROSETTA, NMRPIPE REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 3000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET X 1 REMARK 465 HIS X 135 REMARK 465 HIS X 136 REMARK 465 HIS X 137 REMARK 465 HIS X 138 REMARK 465 HIS X 139 REMARK 465 HIS X 140 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU X 104 -171.75 57.01 REMARK 500 2 GLU X 29 -74.65 -105.79 REMARK 500 2 GLU X 104 178.45 61.03 REMARK 500 3 ASP X 45 117.10 -160.92 REMARK 500 3 GLU X 104 -174.86 60.16 REMARK 500 4 GLU X 104 156.93 67.51 REMARK 500 4 ASN X 120 73.70 48.83 REMARK 500 5 ARG X 40 88.35 -158.14 REMARK 500 5 GLU X 104 168.82 62.36 REMARK 500 5 ALA X 106 -169.13 -100.16 REMARK 500 6 GLU X 104 175.79 56.05 REMARK 500 6 ASN X 120 78.61 55.39 REMARK 500 6 PRO X 131 155.57 -47.50 REMARK 500 7 GLU X 104 -172.76 55.91 REMARK 500 7 PRO X 131 160.87 -49.90 REMARK 500 8 GLU X 29 -67.48 -94.67 REMARK 500 8 ASP X 53 130.00 -27.50 REMARK 500 8 GLU X 104 175.09 59.23 REMARK 500 8 ASN X 120 74.00 55.52 REMARK 500 8 PRO X 121 150.84 -47.27 REMARK 500 8 PRO X 131 151.79 -45.44 REMARK 500 9 VAL X 36 95.18 -69.73 REMARK 500 9 PRO X 69 168.85 -49.51 REMARK 500 9 HIS X 100 63.29 -100.09 REMARK 500 9 GLU X 104 -170.90 55.14 REMARK 500 9 ASN X 120 85.07 42.22 REMARK 500 9 PRO X 131 158.37 -49.99 REMARK 500 10 GLU X 29 -70.39 -85.70 REMARK 500 10 GLU X 38 122.34 -170.32 REMARK 500 10 GLU X 104 170.88 59.35 REMARK 500 10 ASN X 120 75.36 52.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 31311 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED TAU PEPTIDE BINDING REMARK 900 PROTEIN TBPHF6-11 DBREF 38JM X 1 140 PDB 38JM 38JM 1 140 SEQRES 1 X 140 MET SER GLY LEU THR PRO THR GLN ARG GLU VAL ALA ALA SEQRES 2 X 140 LEU LEU ARG ARG ARG VAL GLU GLU LEU ALA GLU ARG LEU SEQRES 3 X 140 ARG ARG GLU ALA GLY ILE ARG ALA GLU VAL ALA GLU PHE SEQRES 4 X 140 ARG VAL VAL GLY GLY ASP ALA GLU VAL LEU LEU ARG LEU SEQRES 5 X 140 ASP ASP ALA THR TRP ALA ARG ILE ALA ALA LEU LEU ALA SEQRES 6 X 140 GLU GLY THR PRO LEU GLU ASP ILE PRO GLU ILE ARG GLU SEQRES 7 X 140 PHE PHE ASP ILE ALA ILE PRO PHE ILE GLN GLU VAL PHE SEQRES 8 X 140 PHE GLU GLU VAL LYS ALA LEU GLY HIS ALA GLU LEU GLU SEQRES 9 X 140 GLY ALA GLN VAL VAL ILE ARG MET TYR ASP GLY ASP PRO SEQRES 10 X 140 ARG ASP ASN PRO PRO LEU ALA SER ARG VAL LEU THR LEU SEQRES 11 X 140 PRO PRO GLY SER HIS HIS HIS HIS HIS HIS HELIX 1 AA1 THR X 5 GLY X 31 1 27 HELIX 2 AA2 ASP X 53 GLY X 67 1 15 HELIX 3 AA3 PRO X 69 ASP X 72 5 4 HELIX 4 AA4 ILE X 73 LEU X 98 1 26 SHEET 1 AA1 2 ALA X 34 VAL X 42 0 SHEET 2 AA1 2 ASP X 45 LEU X 52 -1 O ARG X 51 N GLU X 35 SHEET 1 AA2 2 VAL X 109 MET X 112 0 SHEET 2 AA2 2 ARG X 126 THR X 129 -1 O LEU X 128 N ILE X 110 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MASTER 145 0 0 4 4 0 0 6 1042 1 0 11 END