data_396D
# 
_entry.id   396D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   396D         pdb_0000396d 10.2210/pdb396d/pdb 
RCSB  ADJ0113      ?            ?                   
WWPDB D_1000178860 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1998-05-01 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2017-05-03 
5 'Structure model' 1 4 2024-02-21 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Source and taxonomy'       
4 4 'Structure model' 'Structure summary'         
5 5 'Structure model' 'Data collection'           
6 5 'Structure model' 'Database references'       
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 5 'Structure model' chem_comp_atom 
2 5 'Structure model' chem_comp_bond 
3 5 'Structure model' database_2     
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 5 'Structure model' '_database_2.pdbx_DOI'                
2 5 'Structure model' '_database_2.pdbx_database_accession' 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        396D 
_pdbx_database_status.recvd_initial_deposition_date   1998-04-29 
_pdbx_database_status.deposit_site                    NDB 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
_audit_author.identifier_ORCID 
'Ban, C.'           1 ? 
'Sundaralingam, M.' 2 ? 
# 
_citation.id                        primary 
_citation.title                     'Crystal Structures of Two Isomophous A-DNA Decamers d(GTACGCGTAC) and d(GGCCGCGGCC)' 
_citation.journal_abbrev            'To be Published' 
_citation.journal_volume            ? 
_citation.page_first                ? 
_citation.page_last                 ? 
_citation.year                      ? 
_citation.journal_id_ASTM           ? 
_citation.country                   ? 
_citation.journal_id_ISSN           ? 
_citation.journal_id_CSD            0353 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   ? 
_citation.pdbx_database_id_DOI      ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Ban, C.'           1 ? 
primary 'Ramakrishnan, B.'  2 ? 
primary 'Sundaralingam, M.' 3 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA (5'-D(*GP*GP*CP*CP*GP*CP*GP*GP*CP*C)-3')
;
3046.981 1  ? ? ? ? 
2 water   nat water                                          18.015   59 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DG)(DC)(DC)(DG)(DC)(DG)(DG)(DC)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GGCCGCGGCC 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG n 
1 2  DG n 
1 3  DC n 
1 4  DC n 
1 5  DG n 
1 6  DC n 
1 7  DG n 
1 8  DG n 
1 9  DC n 
1 10 DC n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    'synthetic construct' 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       32630 
_pdbx_entity_src_syn.details                ? 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG 1  1  1  DG G A . n 
A 1 2  DG 2  2  2  DG G A . n 
A 1 3  DC 3  3  3  DC C A . n 
A 1 4  DC 4  4  4  DC C A . n 
A 1 5  DG 5  5  5  DG G A . n 
A 1 6  DC 6  6  6  DC C A . n 
A 1 7  DG 7  7  7  DG G A . n 
A 1 8  DG 8  8  8  DG G A . n 
A 1 9  DC 9  9  9  DC C A . n 
A 1 10 DC 10 10 10 DC C A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 HOH 1  101 101 HOH HOH A . 
B 2 HOH 2  102 102 HOH HOH A . 
B 2 HOH 3  103 103 HOH HOH A . 
B 2 HOH 4  104 104 HOH HOH A . 
B 2 HOH 5  105 105 HOH HOH A . 
B 2 HOH 6  106 106 HOH HOH A . 
B 2 HOH 7  107 107 HOH HOH A . 
B 2 HOH 8  108 108 HOH HOH A . 
B 2 HOH 9  109 109 HOH HOH A . 
B 2 HOH 10 110 110 HOH HOH A . 
B 2 HOH 11 111 111 HOH HOH A . 
B 2 HOH 12 112 112 HOH HOH A . 
B 2 HOH 13 113 113 HOH HOH A . 
B 2 HOH 14 114 114 HOH HOH A . 
B 2 HOH 15 115 115 HOH HOH A . 
B 2 HOH 16 116 116 HOH HOH A . 
B 2 HOH 17 117 117 HOH HOH A . 
B 2 HOH 18 118 118 HOH HOH A . 
B 2 HOH 19 119 119 HOH HOH A . 
B 2 HOH 20 120 120 HOH HOH A . 
B 2 HOH 21 121 121 HOH HOH A . 
B 2 HOH 22 122 122 HOH HOH A . 
B 2 HOH 23 123 123 HOH HOH A . 
B 2 HOH 24 124 124 HOH HOH A . 
B 2 HOH 25 125 125 HOH HOH A . 
B 2 HOH 26 126 126 HOH HOH A . 
B 2 HOH 27 127 127 HOH HOH A . 
B 2 HOH 28 128 128 HOH HOH A . 
B 2 HOH 29 129 129 HOH HOH A . 
B 2 HOH 30 130 130 HOH HOH A . 
B 2 HOH 31 131 131 HOH HOH A . 
B 2 HOH 32 132 132 HOH HOH A . 
B 2 HOH 33 133 133 HOH HOH A . 
B 2 HOH 34 134 134 HOH HOH A . 
B 2 HOH 35 135 135 HOH HOH A . 
B 2 HOH 36 136 136 HOH HOH A . 
B 2 HOH 37 137 137 HOH HOH A . 
B 2 HOH 38 138 138 HOH HOH A . 
B 2 HOH 39 139 139 HOH HOH A . 
B 2 HOH 40 140 140 HOH HOH A . 
B 2 HOH 41 141 141 HOH HOH A . 
B 2 HOH 42 142 142 HOH HOH A . 
B 2 HOH 43 143 143 HOH HOH A . 
B 2 HOH 44 144 144 HOH HOH A . 
B 2 HOH 45 145 145 HOH HOH A . 
B 2 HOH 46 146 146 HOH HOH A . 
B 2 HOH 47 147 147 HOH HOH A . 
B 2 HOH 48 148 148 HOH HOH A . 
B 2 HOH 49 149 149 HOH HOH A . 
B 2 HOH 50 150 150 HOH HOH A . 
B 2 HOH 51 151 151 HOH HOH A . 
B 2 HOH 52 152 152 HOH HOH A . 
B 2 HOH 53 153 153 HOH HOH A . 
B 2 HOH 54 154 154 HOH HOH A . 
B 2 HOH 55 155 155 HOH HOH A . 
B 2 HOH 56 156 156 HOH HOH A . 
B 2 HOH 57 157 157 HOH HOH A . 
B 2 HOH 58 158 158 HOH HOH A . 
B 2 HOH 59 159 159 HOH HOH A . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
X-PLOR refinement       3.2 ? 1 
XENGEN 'data reduction' .   ? 2 
XENGEN 'data scaling'   .   ? 3 
# 
_cell.entry_id           396D 
_cell.length_a           39.050 
_cell.length_b           39.050 
_cell.length_c           82.150 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        120.00 
_cell.Z_PDB              12 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         396D 
_symmetry.space_group_name_H-M             'P 61 2 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                178 
# 
_exptl.entry_id          396D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.97 
_exptl_crystal.density_percent_sol   58.55 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            291.00 
_exptl_crystal_grow.temp_details    291 
_exptl_crystal_grow.pH              7.00 
_exptl_crystal_grow.pdbx_details    'pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 291.00K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER             ? ? ? 
1 2 1 NA-CACODYLATE     ? ? ? 
1 3 1 'COBALT HEXAMINE' ? ? ? 
1 4 1 MPD               ? ? ? 
1 5 2 MPD               ? ? ? 
# 
_diffrn.id                     1 
_diffrn.crystal_id             1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   ? 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'AREA DETECTOR' 
_diffrn_detector.type                   SIEMENS 
_diffrn_detector.pdbx_collection_date   1995-07-23 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      ? 
_diffrn_source.type                        ? 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     396D 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   1.000 
_reflns.d_resolution_low             20.000 
_reflns.d_resolution_high            1.800 
_reflns.number_obs                   2916 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         96.000 
_reflns.pdbx_Rmerge_I_obs            0.0250000 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              4.000 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 396D 
_refine.ls_number_reflns_obs                     2760 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             8.000 
_refine.ls_d_res_high                            1.800 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.1890000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.1890000 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   202 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             59 
_refine_hist.number_atoms_total               261 
_refine_hist.d_res_high                       1.800 
_refine_hist.d_res_low                        8.000 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
x_bond_d                0.013 ? ? ? 'X-RAY DIFFRACTION' ? 
x_bond_d_na             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_bond_d_prot           ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d               ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d_na            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_d_prot          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg             3.60  ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg_na          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_angle_deg_prot        ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_dihedral_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d      ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_improper_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_mcbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_mcangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_scbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
x_scangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_pdbx_xplor_file.serial_no        1 
_pdbx_xplor_file.param_file       PARAM11.DNA 
_pdbx_xplor_file.topol_file       ? 
_pdbx_xplor_file.pdbx_refine_id   'X-RAY DIFFRACTION' 
# 
_database_PDB_matrix.entry_id          396D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  396D 
_struct.title                     'CRYSTAL STRUCTURES OF TWO ISOMOPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        396D 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'A-DNA, DOUBLE HELIX, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    396D 
_struct_ref.pdbx_db_accession          396D 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              396D 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 10 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             396D 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  10 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       10 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555  x,y,z         1.0000000000  0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000  0.0000000000  
2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 41.0750000000 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DG 1  N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 1  A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog2  hydrog ? ? A DG 1  N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 1  A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog3  hydrog ? ? A DG 1  O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 1  A DC 10 11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DG 2  N1 ? ? ? 1_555 A DC 9  N3 ? ? A DG 2  A DC 9  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DG 2  N2 ? ? ? 1_555 A DC 9  O2 ? ? A DG 2  A DC 9  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DG 2  O6 ? ? ? 1_555 A DC 9  N4 ? ? A DG 2  A DC 9  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog7  hydrog ? ? A DC 3  N3 ? ? ? 1_555 A DG 8  N1 ? ? A DC 3  A DG 8  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DC 3  N4 ? ? ? 1_555 A DG 8  O6 ? ? A DC 3  A DG 8  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DC 3  O2 ? ? ? 1_555 A DG 8  N2 ? ? A DC 3  A DG 8  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog10 hydrog ? ? A DC 4  N3 ? ? ? 1_555 A DG 7  N1 ? ? A DC 4  A DG 7  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog11 hydrog ? ? A DC 4  N4 ? ? ? 1_555 A DG 7  O6 ? ? A DC 4  A DG 7  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog12 hydrog ? ? A DC 4  O2 ? ? ? 1_555 A DG 7  N2 ? ? A DC 4  A DG 7  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog13 hydrog ? ? A DG 5  N1 ? ? ? 1_555 A DC 6  N3 ? ? A DG 5  A DC 6  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog14 hydrog ? ? A DG 5  N2 ? ? ? 1_555 A DC 6  O2 ? ? A DG 5  A DC 6  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DG 5  O6 ? ? ? 1_555 A DC 6  N4 ? ? A DG 5  A DC 6  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A DC 6  N3 ? ? ? 1_555 A DG 5  N1 ? ? A DC 6  A DG 5  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog17 hydrog ? ? A DC 6  N4 ? ? ? 1_555 A DG 5  O6 ? ? A DC 6  A DG 5  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A DC 6  O2 ? ? ? 1_555 A DG 5  N2 ? ? A DC 6  A DG 5  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DG 7  N1 ? ? ? 1_555 A DC 4  N3 ? ? A DG 7  A DC 4  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog20 hydrog ? ? A DG 7  N2 ? ? ? 1_555 A DC 4  O2 ? ? A DG 7  A DC 4  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog21 hydrog ? ? A DG 7  O6 ? ? ? 1_555 A DC 4  N4 ? ? A DG 7  A DC 4  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog22 hydrog ? ? A DG 8  N1 ? ? ? 1_555 A DC 3  N3 ? ? A DG 8  A DC 3  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog23 hydrog ? ? A DG 8  N2 ? ? ? 1_555 A DC 3  O2 ? ? A DG 8  A DC 3  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog24 hydrog ? ? A DG 8  O6 ? ? ? 1_555 A DC 3  N4 ? ? A DG 8  A DC 3  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog25 hydrog ? ? A DC 9  N3 ? ? ? 1_555 A DG 2  N1 ? ? A DC 9  A DG 2  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog26 hydrog ? ? A DC 9  N4 ? ? ? 1_555 A DG 2  O6 ? ? A DC 9  A DG 2  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog27 hydrog ? ? A DC 9  O2 ? ? ? 1_555 A DG 2  N2 ? ? A DC 9  A DG 2  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog28 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 1  N1 ? ? A DC 10 A DG 1  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog29 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 1  O6 ? ? A DC 10 A DG 1  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog30 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 1  N2 ? ? A DC 10 A DG 1  11_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "C4'" A DG 1  ? ? "C3'" A DG 1  ? ? "C2'" A DG 1  ? ? 97.78  102.20 -4.42  0.70 N 
2  1 "O3'" A DG 2  ? ? P     A DC 3  ? ? "O5'" A DC 3  ? ? 115.51 104.00 11.51  1.90 Y 
3  1 "C4'" A DC 3  ? ? "C3'" A DC 3  ? ? "C2'" A DC 3  ? ? 97.21  102.20 -4.99  0.70 N 
4  1 "O4'" A DC 3  ? ? "C1'" A DC 3  ? ? N1    A DC 3  ? ? 111.98 108.30 3.68   0.30 N 
5  1 N1    A DC 3  ? ? C2    A DC 3  ? ? O2    A DC 3  ? ? 123.07 118.90 4.17   0.60 N 
6  1 "C4'" A DC 4  ? ? "C3'" A DC 4  ? ? "C2'" A DC 4  ? ? 96.07  102.20 -6.13  0.70 N 
7  1 "O4'" A DC 4  ? ? "C1'" A DC 4  ? ? N1    A DC 4  ? ? 111.71 108.30 3.41   0.30 N 
8  1 "O3'" A DC 4  ? ? P     A DG 5  ? ? "O5'" A DG 5  ? ? 92.37  104.00 -11.63 1.90 Y 
9  1 "O3'" A DC 4  ? ? P     A DG 5  ? ? OP2   A DG 5  ? ? 147.93 110.50 37.43  1.10 Y 
10 1 "O3'" A DC 4  ? ? P     A DG 5  ? ? OP1   A DG 5  ? ? 77.67  105.20 -27.53 2.20 Y 
11 1 "O4'" A DG 5  ? ? "C1'" A DG 5  ? ? N9    A DG 5  ? ? 111.78 108.30 3.48   0.30 N 
12 1 "O4'" A DC 6  ? ? "C4'" A DC 6  ? ? "C3'" A DC 6  ? ? 101.77 104.50 -2.73  0.40 N 
13 1 "O4'" A DC 6  ? ? "C1'" A DC 6  ? ? N1    A DC 6  ? ? 113.39 108.30 5.09   0.30 N 
14 1 "O3'" A DC 6  ? ? P     A DG 7  ? ? OP2   A DG 7  ? ? 117.82 110.50 7.32   1.10 Y 
15 1 "O3'" A DC 6  ? ? P     A DG 7  ? ? OP1   A DG 7  ? ? 90.43  105.20 -14.77 2.20 Y 
16 1 "O5'" A DG 8  ? ? "C5'" A DG 8  ? ? "C4'" A DG 8  ? ? 103.68 109.40 -5.72  0.80 N 
17 1 "O4'" A DC 9  ? ? "C1'" A DC 9  ? ? N1    A DC 9  ? ? 113.08 108.30 4.78   0.30 N 
18 1 "O3'" A DC 9  ? ? P     A DC 10 ? ? OP2   A DC 10 ? ? 124.94 110.50 14.44  1.10 Y 
19 1 "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.40  102.20 -4.80  0.70 N 
20 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1    A DC 10 ? ? 113.05 108.30 4.75   0.30 N 
21 1 N1    A DC 10 ? ? C2    A DC 10 ? ? O2    A DC 10 ? ? 122.78 118.90 3.88   0.60 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 DG A 1 ? ? 0.094 'SIDE CHAIN' 
2 1 DG A 2 ? ? 0.057 'SIDE CHAIN' 
3 1 DG A 5 ? ? 0.079 'SIDE CHAIN' 
4 1 DG A 8 ? ? 0.064 'SIDE CHAIN' 
5 1 DC A 9 ? ? 0.112 'SIDE CHAIN' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DC  OP3    O N N 1  
DC  P      P N N 2  
DC  OP1    O N N 3  
DC  OP2    O N N 4  
DC  "O5'"  O N N 5  
DC  "C5'"  C N N 6  
DC  "C4'"  C N R 7  
DC  "O4'"  O N N 8  
DC  "C3'"  C N S 9  
DC  "O3'"  O N N 10 
DC  "C2'"  C N N 11 
DC  "C1'"  C N R 12 
DC  N1     N N N 13 
DC  C2     C N N 14 
DC  O2     O N N 15 
DC  N3     N N N 16 
DC  C4     C N N 17 
DC  N4     N N N 18 
DC  C5     C N N 19 
DC  C6     C N N 20 
DC  HOP3   H N N 21 
DC  HOP2   H N N 22 
DC  "H5'"  H N N 23 
DC  "H5''" H N N 24 
DC  "H4'"  H N N 25 
DC  "H3'"  H N N 26 
DC  "HO3'" H N N 27 
DC  "H2'"  H N N 28 
DC  "H2''" H N N 29 
DC  "H1'"  H N N 30 
DC  H41    H N N 31 
DC  H42    H N N 32 
DC  H5     H N N 33 
DC  H6     H N N 34 
DG  OP3    O N N 35 
DG  P      P N N 36 
DG  OP1    O N N 37 
DG  OP2    O N N 38 
DG  "O5'"  O N N 39 
DG  "C5'"  C N N 40 
DG  "C4'"  C N R 41 
DG  "O4'"  O N N 42 
DG  "C3'"  C N S 43 
DG  "O3'"  O N N 44 
DG  "C2'"  C N N 45 
DG  "C1'"  C N R 46 
DG  N9     N Y N 47 
DG  C8     C Y N 48 
DG  N7     N Y N 49 
DG  C5     C Y N 50 
DG  C6     C N N 51 
DG  O6     O N N 52 
DG  N1     N N N 53 
DG  C2     C N N 54 
DG  N2     N N N 55 
DG  N3     N N N 56 
DG  C4     C Y N 57 
DG  HOP3   H N N 58 
DG  HOP2   H N N 59 
DG  "H5'"  H N N 60 
DG  "H5''" H N N 61 
DG  "H4'"  H N N 62 
DG  "H3'"  H N N 63 
DG  "HO3'" H N N 64 
DG  "H2'"  H N N 65 
DG  "H2''" H N N 66 
DG  "H1'"  H N N 67 
DG  H8     H N N 68 
DG  H1     H N N 69 
DG  H21    H N N 70 
DG  H22    H N N 71 
HOH O      O N N 72 
HOH H1     H N N 73 
HOH H2     H N N 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DC  OP3   P      sing N N 1  
DC  OP3   HOP3   sing N N 2  
DC  P     OP1    doub N N 3  
DC  P     OP2    sing N N 4  
DC  P     "O5'"  sing N N 5  
DC  OP2   HOP2   sing N N 6  
DC  "O5'" "C5'"  sing N N 7  
DC  "C5'" "C4'"  sing N N 8  
DC  "C5'" "H5'"  sing N N 9  
DC  "C5'" "H5''" sing N N 10 
DC  "C4'" "O4'"  sing N N 11 
DC  "C4'" "C3'"  sing N N 12 
DC  "C4'" "H4'"  sing N N 13 
DC  "O4'" "C1'"  sing N N 14 
DC  "C3'" "O3'"  sing N N 15 
DC  "C3'" "C2'"  sing N N 16 
DC  "C3'" "H3'"  sing N N 17 
DC  "O3'" "HO3'" sing N N 18 
DC  "C2'" "C1'"  sing N N 19 
DC  "C2'" "H2'"  sing N N 20 
DC  "C2'" "H2''" sing N N 21 
DC  "C1'" N1     sing N N 22 
DC  "C1'" "H1'"  sing N N 23 
DC  N1    C2     sing N N 24 
DC  N1    C6     sing N N 25 
DC  C2    O2     doub N N 26 
DC  C2    N3     sing N N 27 
DC  N3    C4     doub N N 28 
DC  C4    N4     sing N N 29 
DC  C4    C5     sing N N 30 
DC  N4    H41    sing N N 31 
DC  N4    H42    sing N N 32 
DC  C5    C6     doub N N 33 
DC  C5    H5     sing N N 34 
DC  C6    H6     sing N N 35 
DG  OP3   P      sing N N 36 
DG  OP3   HOP3   sing N N 37 
DG  P     OP1    doub N N 38 
DG  P     OP2    sing N N 39 
DG  P     "O5'"  sing N N 40 
DG  OP2   HOP2   sing N N 41 
DG  "O5'" "C5'"  sing N N 42 
DG  "C5'" "C4'"  sing N N 43 
DG  "C5'" "H5'"  sing N N 44 
DG  "C5'" "H5''" sing N N 45 
DG  "C4'" "O4'"  sing N N 46 
DG  "C4'" "C3'"  sing N N 47 
DG  "C4'" "H4'"  sing N N 48 
DG  "O4'" "C1'"  sing N N 49 
DG  "C3'" "O3'"  sing N N 50 
DG  "C3'" "C2'"  sing N N 51 
DG  "C3'" "H3'"  sing N N 52 
DG  "O3'" "HO3'" sing N N 53 
DG  "C2'" "C1'"  sing N N 54 
DG  "C2'" "H2'"  sing N N 55 
DG  "C2'" "H2''" sing N N 56 
DG  "C1'" N9     sing N N 57 
DG  "C1'" "H1'"  sing N N 58 
DG  N9    C8     sing Y N 59 
DG  N9    C4     sing Y N 60 
DG  C8    N7     doub Y N 61 
DG  C8    H8     sing N N 62 
DG  N7    C5     sing Y N 63 
DG  C5    C6     sing N N 64 
DG  C5    C4     doub Y N 65 
DG  C6    O6     doub N N 66 
DG  C6    N1     sing N N 67 
DG  N1    C2     sing N N 68 
DG  N1    H1     sing N N 69 
DG  C2    N2     sing N N 70 
DG  C2    N3     doub N N 71 
DG  N2    H21    sing N N 72 
DG  N2    H22    sing N N 73 
DG  N3    C4     sing N N 74 
HOH O     H1     sing N N 75 
HOH O     H2     sing N N 76 
# 
_ndb_struct_conf_na.entry_id   396D 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 1  1_555 A DC 10 11_555 -0.610 -0.322 -0.113 -3.124  -1.793  -2.389 1  A_DG1:DC10_A A 1  ? A 10 ? 19 1 
1 A DG 2  1_555 A DC 9  11_555 -0.272 -0.240 -0.007 4.564   -8.635  0.658  2  A_DG2:DC9_A  A 2  ? A 9  ? 19 1 
1 A DC 3  1_555 A DG 8  11_555 0.119  -0.265 -0.111 11.081  -6.174  -0.590 3  A_DC3:DG8_A  A 3  ? A 8  ? 19 1 
1 A DC 4  1_555 A DG 7  11_555 0.101  -0.158 -0.113 9.759   -8.881  3.327  4  A_DC4:DG7_A  A 4  ? A 7  ? 19 1 
1 A DG 5  1_555 A DC 6  11_555 -0.273 -0.365 -0.208 1.424   -12.914 -3.484 5  A_DG5:DC6_A  A 5  ? A 6  ? 19 1 
1 A DC 6  1_555 A DG 5  11_555 0.273  -0.365 -0.208 -1.424  -12.914 -3.484 6  A_DC6:DG5_A  A 6  ? A 5  ? 19 1 
1 A DG 7  1_555 A DC 4  11_555 -0.101 -0.158 -0.113 -9.759  -8.881  3.327  7  A_DG7:DC4_A  A 7  ? A 4  ? 19 1 
1 A DG 8  1_555 A DC 3  11_555 -0.119 -0.265 -0.111 -11.081 -6.174  -0.590 8  A_DG8:DC3_A  A 8  ? A 3  ? 19 1 
1 A DC 9  1_555 A DG 2  11_555 0.272  -0.240 -0.007 -4.564  -8.635  0.658  9  A_DC9:DG2_A  A 9  ? A 2  ? 19 1 
1 A DC 10 1_555 A DG 1  11_555 0.610  -0.322 -0.113 3.124   -1.793  -2.389 10 A_DC10:DG1_A A 10 ? A 1  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 1 1_555 A DC 10 11_555 A DG 2  1_555 A DC 9 11_555 -0.116 -0.762 3.161 -2.267 7.732  33.812 -2.392 -0.132 2.922 13.064 
3.830  34.732 1 AA_DG1DG2:DC9DC10_AA A 1 ? A 10 ? A 2  ? A 9 ? 
1 A DG 2 1_555 A DC 9  11_555 A DC 3  1_555 A DG 8 11_555 0.346  -1.201 3.275 -0.099 4.162  33.213 -2.757 -0.617 3.105 7.245  
0.173  33.466 2 AA_DG2DC3:DG8DC9_AA  A 2 ? A 9  ? A 3  ? A 8 ? 
1 A DC 3 1_555 A DG 8  11_555 A DC 4  1_555 A DG 7 11_555 -0.368 -1.861 3.465 -2.667 8.426  26.224 -5.898 0.136  2.767 17.934 
5.677  27.649 3 AA_DC3DC4:DG7DG8_AA  A 3 ? A 8  ? A 4  ? A 7 ? 
1 A DC 4 1_555 A DG 7  11_555 A DG 5  1_555 A DC 6 11_555 -0.865 -1.501 3.411 -3.495 12.259 32.817 -4.278 0.922  2.766 20.749 
5.916  35.143 4 AA_DC4DG5:DC6DG7_AA  A 4 ? A 7  ? A 5  ? A 6 ? 
1 A DG 5 1_555 A DC 6  11_555 A DC 6  1_555 A DG 5 11_555 0.000  -1.456 3.374 0.000  6.548  36.710 -3.141 0.000  3.078 10.296 
0.000  37.270 5 AA_DG5DC6:DG5DC6_AA  A 5 ? A 6  ? A 6  ? A 5 ? 
1 A DC 6 1_555 A DG 5  11_555 A DG 7  1_555 A DC 4 11_555 0.865  -1.501 3.411 3.495  12.259 32.817 -4.278 -0.922 2.766 20.749 
-5.916 35.143 6 AA_DC6DG7:DC4DG5_AA  A 6 ? A 5  ? A 7  ? A 4 ? 
1 A DG 7 1_555 A DC 4  11_555 A DG 8  1_555 A DC 3 11_555 0.368  -1.861 3.465 2.667  8.426  26.224 -5.898 -0.136 2.767 17.934 
-5.677 27.649 7 AA_DG7DG8:DC3DC4_AA  A 7 ? A 4  ? A 8  ? A 3 ? 
1 A DG 8 1_555 A DC 3  11_555 A DC 9  1_555 A DG 2 11_555 -0.346 -1.201 3.275 0.099  4.162  33.213 -2.757 0.617  3.105 7.245  
-0.173 33.466 8 AA_DG8DC9:DG2DC3_AA  A 8 ? A 3  ? A 9  ? A 2 ? 
1 A DC 9 1_555 A DG 2  11_555 A DC 10 1_555 A DG 1 11_555 0.116  -0.762 3.161 2.267  7.732  33.812 -2.392 0.132  2.922 13.064 
-3.830 34.732 9 AA_DC9DC10:DG1DG2_AA A 9 ? A 2  ? A 10 ? A 1 ? 
# 
_atom_sites.entry_id                    396D 
_atom_sites.fract_transf_matrix[1][1]   0.025608 
_atom_sites.fract_transf_matrix[1][2]   0.014785 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.029570 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.012173 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_