HEADER TRANSPORT PROTEIN 15-OCT-26 39LS TITLE THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN (N280D MUTANT) FROM TITLE 2 TRICHORMUS VARIABILIS ATCC 29413 IN COMPLEX WITH PHENYLALANINE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINO ACID/AMIDE ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN, COMPND 3 HAAT FAMILY; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHORMUS VARIABILIS ATCC 29413; SOURCE 3 ORGANISM_TAXID: 240292; SOURCE 4 GENE: AVA_0465; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE KEYWDS 2 TRANSPORT PROTEIN, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 1 28-OCT-26 39LS 0 JRNL AUTH K.TAN,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN (N280D JRNL TITL 2 MUTANT) FROM TRICHORMUS VARIABILIS ATCC 29413 IN COMPLEX JRNL TITL 3 WITH PHENYLALANINE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2.1_6048 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 38505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.4900 - 4.3300 0.97 2670 111 0.1527 0.1641 REMARK 3 2 4.3300 - 3.4400 1.00 2641 137 0.1665 0.1974 REMARK 3 3 3.4400 - 3.0100 1.00 2612 157 0.2023 0.2070 REMARK 3 4 3.0100 - 2.7300 1.00 2624 149 0.2177 0.2236 REMARK 3 5 2.7300 - 2.5400 1.00 2602 147 0.2202 0.2757 REMARK 3 6 2.5400 - 2.3900 1.00 2622 117 0.2216 0.2120 REMARK 3 7 2.3900 - 2.2700 1.00 2604 164 0.2255 0.2526 REMARK 3 8 2.2700 - 2.1700 1.00 2619 129 0.2320 0.2759 REMARK 3 9 2.1700 - 2.0800 1.00 2579 130 0.2313 0.2625 REMARK 3 10 2.0800 - 2.0100 1.00 2579 161 0.2464 0.2587 REMARK 3 11 2.0100 - 1.9500 1.00 2655 126 0.2435 0.2507 REMARK 3 12 1.9500 - 1.8900 1.00 2589 130 0.2666 0.3452 REMARK 3 13 1.8900 - 1.8400 1.00 2573 144 0.2825 0.3029 REMARK 3 14 1.8400 - 1.8000 0.99 2604 130 0.3053 0.3254 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.225 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.747 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2774 REMARK 3 ANGLE : 0.796 3770 REMARK 3 CHIRALITY : 0.054 443 REMARK 3 PLANARITY : 0.006 498 REMARK 3 DIHEDRAL : 15.871 1004 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 53:172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.834 -23.985 -10.070 REMARK 3 T TENSOR REMARK 3 T11: 0.3004 T22: 0.2928 REMARK 3 T33: 0.3715 T12: -0.0643 REMARK 3 T13: -0.1813 T23: 0.0792 REMARK 3 L TENSOR REMARK 3 L11: 0.7384 L22: 2.0315 REMARK 3 L33: 1.6753 L12: -0.5887 REMARK 3 L13: -0.3604 L23: -0.8812 REMARK 3 S TENSOR REMARK 3 S11: 0.0895 S12: 0.2269 S13:0.0683854 REMARK 3 S21: -0.4782 S22: 0.1707 S23: 0.590130 REMARK 3 S31: 0.2311 S32: -0.1659 S33:-0.173748 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 173:284 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.948 -40.737 15.767 REMARK 3 T TENSOR REMARK 3 T11: 0.4678 T22: 0.3120 REMARK 3 T33: 0.2650 T12: -0.0741 REMARK 3 T13: 0.0501 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.4983 L22: 5.5085 REMARK 3 L33: 3.0896 L12: 0.2915 REMARK 3 L13: 0.0495 L23: -2.9732 REMARK 3 S TENSOR REMARK 3 S11: 0.0276 S12: -0.0510 S13: 0.078623 REMARK 3 S21: 0.6943 S22: 0.0523 S23: 0.4498 REMARK 3 S31: -0.2360 S32: 0.0367 S33: -0.11341 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 285:310 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.492 -40.434 4.270 REMARK 3 T TENSOR REMARK 3 T11: 0.3957 T22: 0.4720 REMARK 3 T33: 0.7504 T12: -0.1090 REMARK 3 T13: -0.1169 T23: 0.2562 REMARK 3 L TENSOR REMARK 3 L11: 2.7145 L22: 0.0519 REMARK 3 L33: 2.0184 L12: -0.0676 REMARK 3 L13: -0.3838 L23: 0.3002 REMARK 3 S TENSOR REMARK 3 S11: 0.1225 S12: 0.3597 S13: 0.4103 REMARK 3 S21: -0.3462 S22: 0.4792 S23:1.2229809 REMARK 3 S31: 0.2894 S32: -0.7843 S33: -0.5255 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 311:329 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.931 -35.150 -8.447 REMARK 3 T TENSOR REMARK 3 T11: 0.3559 T22: 0.7694 REMARK 3 T33: 1.3192 T12: -0.4472 REMARK 3 T13: -0.7234 T23: 0.5250 REMARK 3 L TENSOR REMARK 3 L11: 0.6619 L22: 0.0302 REMARK 3 L33: 0.3965 L12: -0.1375 REMARK 3 L13: -0.1682 L23: 0.0445 REMARK 3 S TENSOR REMARK 3 S11: 0.0836 S12: 0.2033 S13: 0.1704 REMARK 3 S21: -0.1338 S22: 0.1862 S23: 0.080449 REMARK 3 S31: 0.2428 S32: -0.2623 S33: -0.09766 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 330:396 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.744 -15.011 -7.509 REMARK 3 T TENSOR REMARK 3 T11: 0.2401 T22: 0.4080 REMARK 3 T33: 0.7365 T12: -0.0078 REMARK 3 T13: -0.0545 T23: 0.2533 REMARK 3 L TENSOR REMARK 3 L11: 0.0421 L22: 2.0783 REMARK 3 L33: 0.9731 L12: 0.0611 REMARK 3 L13: -0.1526 L23: -1.0519 REMARK 3 S TENSOR REMARK 3 S11: 0.1603 S12: -0.0760 S13: -0.07176 REMARK 3 S21: 0.0717 S22: 0.5583 S23: 1.2853 REMARK 3 S31: -0.2584 S32: -0.5975 S33:-0.427762 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 397:415 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.015 -44.317 5.530 REMARK 3 T TENSOR REMARK 3 T11: 0.4331 T22: 0.5138 REMARK 3 T33: 0.7755 T12: -0.1405 REMARK 3 T13: -0.0759 T23: 0.2765 REMARK 3 L TENSOR REMARK 3 L11: 3.1736 L22: 1.3651 REMARK 3 L33: 2.4559 L12: 1.7403 REMARK 3 L13: 0.8548 L23: 0.7476 REMARK 3 S TENSOR REMARK 3 S11: 0.3509 S12: 0.3389 S13: 0.1902 REMARK 3 S21: 0.0172 S22: 0.3972 S23: 0.1241 REMARK 3 S31: 0.3856 S32: -0.5545 S33: -0.6543 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 501:501 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.748 -31.727 1.747 REMARK 3 T TENSOR REMARK 3 T11: 0.4507 T22: 0.3450 REMARK 3 T33: 0.5381 T12: -0.0763 REMARK 3 T13: -0.1600 T23: 0.0957 REMARK 3 L TENSOR REMARK 3 L11: 8.5300 L22: 3.3256 REMARK 3 L33: 1.1322 L12: 4.2911 REMARK 3 L13: 0.6235 L23: 1.4246 REMARK 3 S TENSOR REMARK 3 S11: -0.3834 S12: -0.0077 S13: -2.119 REMARK 3 S21: -0.3313 S22: -0.0723 S23: -0.8088 REMARK 3 S31: -0.8737 S32: 0.0635 S33:0.4704564 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 39LS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-OCT-26. REMARK 100 THE DEPOSITION ID IS D_1000311857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38576 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 28.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M AMMONIUM ACETATE, 0.085 M REMARK 280 SODIUM ACETATE:HCL, 25.5% (W/V) PEG 4000 AND 15% (V/V) GLYCEROL, REMARK 280 PH 4.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.49767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.99533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.74650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.24417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 9.24883 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 ASN A 23 REMARK 465 ALA A 24 REMARK 465 THR A 25 REMARK 465 ASN A 26 REMARK 465 THR A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 ASN A 30 REMARK 465 SER A 31 REMARK 465 THR A 32 REMARK 465 ASN A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 PRO A 36 REMARK 465 ASN A 37 REMARK 465 ASN A 38 REMARK 465 THR A 39 REMARK 465 THR A 40 REMARK 465 ASN A 41 REMARK 465 THR A 42 REMARK 465 THR A 43 REMARK 465 THR A 44 REMARK 465 ASN A 45 REMARK 465 VAL A 46 REMARK 465 THR A 47 REMARK 465 THR A 48 REMARK 465 THR A 49 REMARK 465 SER A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 465 LYS A 416 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 88 NZ REMARK 470 LYS A 120 CD CE NZ REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 ASN A 190 CG OD1 ND2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LYS A 217 CD CE NZ REMARK 470 LYS A 228 CE NZ REMARK 470 LYS A 314 CD CE NZ REMARK 470 ASP A 406 CG OD1 OD2 REMARK 470 LYS A 411 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 169.65 77.09 REMARK 500 ALA A 104 -156.27 57.99 REMARK 500 SER A 153 31.61 -161.56 REMARK 500 LYS A 292 -134.79 57.18 REMARK 500 GLU A 404 -163.38 -77.58 REMARK 500 LYS A 405 -77.19 -54.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 160 O REMARK 620 2 GLY A 163 O 84.8 REMARK 620 3 VAL A 166 O 99.6 100.2 REMARK 620 4 ILE A 388 O 89.6 160.6 99.0 REMARK 620 5 HOH A 727 O 177.4 95.6 82.9 89.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC110063 RELATED DB: TARGETTRACK DBREF 39LS A 25 416 UNP Q3MFZ5 Q3MFZ5_TRIV2 25 416 SEQADV 39LS SER A 22 UNP Q3MFZ5 EXPRESSION TAG SEQADV 39LS ASN A 23 UNP Q3MFZ5 EXPRESSION TAG SEQADV 39LS ALA A 24 UNP Q3MFZ5 EXPRESSION TAG SEQADV 39LS ASP A 280 UNP Q3MFZ5 ASN 280 ENGINEERED MUTATION SEQRES 1 A 395 SER ASN ALA THR ASN THR ASP THR ASN SER THR ASN ASN SEQRES 2 A 395 SER PRO ASN ASN THR THR ASN THR THR THR ASN VAL THR SEQRES 3 A 395 THR THR SER ASP LYS ASN THR ILE PRO ILE GLY ILE ALA SEQRES 4 A 395 LEU ALA GLN THR SER ASN VAL ALA LEU LEU GLY GLN GLU SEQRES 5 A 395 GLN VAL ALA GLY ALA LYS ILE ALA GLU LYS TYR PHE ASN SEQRES 6 A 395 ASP LYS GLY GLY VAL ASN GLY THR PRO ILE LYS LEU ILE SEQRES 7 A 395 PHE GLN ASP THR ALA GLY ASP GLU ALA GLY THR ILE ASN SEQRES 8 A 395 ALA PHE GLN THR LEU ILE ASN LYS ASP LYS VAL VAL GLY SEQRES 9 A 395 ILE VAL GLY PRO THR LEU SER GLN GLN ALA PHE SER ALA SEQRES 10 A 395 ASN PRO ILE ALA GLU ARG ALA LYS VAL PRO VAL VAL GLY SEQRES 11 A 395 PRO SER ASN THR ALA LYS GLY ILE PRO GLU ILE GLY ASP SEQRES 12 A 395 TYR VAL ALA ARG VAL SER ALA PRO VAL SER VAL VAL ALA SEQRES 13 A 395 PRO ASN SER VAL LYS ALA ALA LEU LYS GLN ASN PRO ASN SEQRES 14 A 395 ILE LYS LYS VAL ALA VAL PHE PHE ALA GLN ASN ASP ALA SEQRES 15 A 395 PHE SER LYS SER GLU THR GLU ILE PHE GLN GLN THR VAL SEQRES 16 A 395 LYS ASP GLN GLY LEU GLU LEU VAL THR VAL GLN LYS PHE SEQRES 17 A 395 GLN THR THR ASP THR ASP PHE GLN SER GLN ALA THR ASN SEQRES 18 A 395 ALA ILE ASN LEU LYS PRO ASP LEU VAL ILE ILE SER GLY SEQRES 19 A 395 LEU ALA ALA ASP GLY GLY ASN LEU VAL ARG GLN LEU ARG SEQRES 20 A 395 GLU LEU GLY TYR GLN GLY ALA ILE ILE GLY GLY ASP GLY SEQRES 21 A 395 LEU ASN THR SER ASN VAL PHE ALA VAL CYS LYS ALA LEU SEQRES 22 A 395 CYS ASP GLY VAL LEU ILE ALA GLN ALA TYR SER PRO GLU SEQRES 23 A 395 TYR THR GLY GLU ILE ASN LYS ALA PHE ARG GLN ALA TYR SEQRES 24 A 395 VAL ASP GLN TYR LYS LYS GLU PRO PRO GLN PHE SER ALA SEQRES 25 A 395 GLN ALA PHE ALA ALA VAL GLN VAL TYR VAL GLU SER LEU SEQRES 26 A 395 LYS ALA LEU ASP THR LYS ASN LYS VAL SER LYS ILE GLN SEQRES 27 A 395 LEU PRO GLU LEU ARG THR GLU LEU ASN LYS GLN LEU LEU SEQRES 28 A 395 THR GLY LYS TYR ASN THR PRO LEU GLY GLU ILE SER PHE SEQRES 29 A 395 THR PRO ILE GLY GLU VAL VAL GLN LYS ASP PHE TYR VAL SEQRES 30 A 395 ALA GLN ILE LYS MSE GLU LYS ASP GLY SER GLN GLY LYS SEQRES 31 A 395 PHE THR PHE LEU LYS MODRES 39LS MSE A 403 MET MODIFIED RESIDUE HET MSE A 403 8 HET PHE A 501 12 HET MG A 502 1 HETNAM MSE SELENOMETHIONINE HETNAM PHE PHENYLALANINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 PHE C9 H11 N O2 FORMUL 3 MG MG 2+ FORMUL 4 HOH *160(H2 O) HELIX 1 AA1 VAL A 67 LYS A 88 1 22 HELIX 2 AA2 ASP A 106 LYS A 120 1 15 HELIX 3 AA3 LEU A 131 LYS A 146 1 16 HELIX 4 AA4 ILE A 159 GLY A 163 5 5 HELIX 5 AA5 PRO A 172 ASN A 188 1 17 HELIX 6 AA6 ASP A 202 GLN A 219 1 18 HELIX 7 AA7 PHE A 236 ASN A 245 1 10 HELIX 8 AA8 LEU A 256 LEU A 270 1 15 HELIX 9 AA9 ASP A 280 ASN A 283 5 4 HELIX 10 AB1 THR A 284 ASN A 286 5 3 HELIX 11 AB2 VAL A 287 LYS A 292 1 6 HELIX 12 AB3 ALA A 293 ASP A 296 5 4 HELIX 13 AB4 GLY A 310 LYS A 325 1 16 HELIX 14 AB5 PRO A 329 ASN A 353 1 25 HELIX 15 AB6 LYS A 354 ILE A 358 5 5 HELIX 16 AB7 GLN A 359 GLY A 374 1 16 SHEET 1 AA1 5 ILE A 96 PHE A 100 0 SHEET 2 AA1 5 ILE A 55 ILE A 59 1 N ILE A 57 O ILE A 99 SHEET 3 AA1 5 ILE A 126 VAL A 127 1 O VAL A 127 N GLY A 58 SHEET 4 AA1 5 VAL A 149 GLY A 151 1 O VAL A 150 N ILE A 126 SHEET 5 AA1 5 VAL A 166 ARG A 168 1 O ALA A 167 N GLY A 151 SHEET 1 AA2 4 GLU A 222 PHE A 229 0 SHEET 2 AA2 4 LYS A 193 ALA A 199 1 N VAL A 196 O GLN A 227 SHEET 3 AA2 4 LEU A 250 SER A 254 1 O ILE A 252 N PHE A 197 SHEET 4 AA2 4 ALA A 275 GLY A 278 1 O ILE A 277 N VAL A 251 SHEET 1 AA3 3 LEU A 299 GLN A 302 0 SHEET 2 AA3 3 TYR A 397 MSE A 403 -1 O TYR A 397 N GLN A 302 SHEET 3 AA3 3 GLY A 410 PHE A 414 -1 O THR A 413 N GLN A 400 SHEET 1 AA4 3 TYR A 376 THR A 378 0 SHEET 2 AA4 3 GLY A 381 PHE A 385 -1 O GLY A 381 N THR A 378 SHEET 3 AA4 3 VAL A 391 VAL A 392 -1 O VAL A 392 N SER A 384 SSBOND 1 CYS A 291 CYS A 295 1555 1555 2.04 LINK C LYS A 402 N MSE A 403 1555 1555 1.33 LINK C MSE A 403 N GLU A 404 1555 1555 1.33 LINK O PRO A 160 MG MG A 502 1555 1555 2.38 LINK O GLY A 163 MG MG A 502 1555 1555 2.25 LINK O VAL A 166 MG MG A 502 1555 1555 2.38 LINK O ILE A 388 MG MG A 502 1555 1555 2.30 LINK MG MG A 502 O HOH A 727 1555 1555 2.33 CISPEP 1 GLY A 128 PRO A 129 0 -5.94 CRYST1 114.444 114.444 55.493 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008738 0.005045 0.000000 0.00000 SCALE2 0.000000 0.010090 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018020 0.00000 CONECT 769 2731 CONECT 793 2731 CONECT 817 2731 CONECT 1743 1771 CONECT 1771 1743 CONECT 2503 2731 CONECT 2615 2622 CONECT 2622 2615 2623 CONECT 2623 2622 2624 2626 CONECT 2624 2623 2625 2630 CONECT 2625 2624 CONECT 2626 2623 2627 CONECT 2627 2626 2628 CONECT 2628 2627 2629 CONECT 2629 2628 CONECT 2630 2624 CONECT 2731 769 793 817 2503 CONECT 2731 2858 CONECT 2858 2731 MASTER 409 0 3 16 15 0 0 6 2890 1 19 31 END