HEADER TRANSPORT PROTEIN 16-OCT-26 39NC TITLE THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN (L70S AND N280D TITLE 2 MUTANT) FROM TRICHORMUS VARIABILIS ATCC 29413 IN COMPLEX WITH LYSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINO ACID/AMIDE ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN, COMPND 3 HAAT FAMILY; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHORMUS VARIABILIS ATCC 29413; SOURCE 3 ORGANISM_TAXID: 240292; SOURCE 4 GENE: AVA_0465; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 TRANSPORT PROTEIN, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 1 28-OCT-26 39NC 0 JRNL AUTH K.TAN,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN (L70S AND JRNL TITL 2 N280D MUTANT) FROM TRICHORMUS VARIABILIS ATCC 29413 IN JRNL TITL 3 COMPLEX WITH LYSINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2.1_6048 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 47121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8600 - 4.3200 1.00 2728 133 0.1445 0.1459 REMARK 3 2 4.3200 - 3.4300 1.00 2672 122 0.1614 0.1744 REMARK 3 3 3.4300 - 3.0000 1.00 2651 156 0.1925 0.1964 REMARK 3 4 3.0000 - 2.7200 1.00 2668 110 0.2096 0.2254 REMARK 3 5 2.7200 - 2.5300 1.00 2629 134 0.2064 0.2112 REMARK 3 6 2.5300 - 2.3800 1.00 2636 135 0.2170 0.2515 REMARK 3 7 2.3800 - 2.2600 1.00 2628 150 0.2197 0.2174 REMARK 3 8 2.2600 - 2.1600 1.00 2620 138 0.2231 0.2113 REMARK 3 9 2.1600 - 2.0800 1.00 2620 134 0.2175 0.2619 REMARK 3 10 2.0800 - 2.0100 1.00 2633 144 0.2368 0.2923 REMARK 3 11 2.0100 - 1.9400 1.00 2618 153 0.2535 0.2849 REMARK 3 12 1.9400 - 1.8900 1.00 2647 129 0.2497 0.2897 REMARK 3 13 1.8900 - 1.8400 1.00 2591 129 0.2512 0.2749 REMARK 3 14 1.8400 - 1.7900 1.00 2608 148 0.2461 0.2996 REMARK 3 15 1.7900 - 1.7500 1.00 2625 122 0.2625 0.3468 REMARK 3 16 1.7500 - 1.7100 1.00 2625 132 0.2824 0.3199 REMARK 3 17 1.7100 - 1.6800 0.99 2604 149 0.3013 0.3326 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.214 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2792 REMARK 3 ANGLE : 1.125 3804 REMARK 3 CHIRALITY : 0.070 448 REMARK 3 PLANARITY : 0.008 505 REMARK 3 DIHEDRAL : 17.521 1017 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 53:172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.702 -23.678 -10.112 REMARK 3 T TENSOR REMARK 3 T11: 0.3328 T22: 0.2791 REMARK 3 T33: 0.3908 T12: -0.0655 REMARK 3 T13: -0.2109 T23: 0.1160 REMARK 3 L TENSOR REMARK 3 L11: 0.6708 L22: 0.8216 REMARK 3 L33: 1.1615 L12: -0.3946 REMARK 3 L13: 0.0899 L23: -0.1947 REMARK 3 S TENSOR REMARK 3 S11: 0.0637 S12: 0.1379 S13:0.1158846 REMARK 3 S21: -0.4354 S22: 0.1985 S23:0.6643905 REMARK 3 S31: 0.2803 S32: -0.1377 S33: -0.1801 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 173:295 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.372 -41.231 14.963 REMARK 3 T TENSOR REMARK 3 T11: 0.3412 T22: 0.2040 REMARK 3 T33: 0.2002 T12: -0.0329 REMARK 3 T13: 0.0350 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 2.1709 L22: 3.2759 REMARK 3 L33: 3.5534 L12: 0.0456 REMARK 3 L13: 0.0819 L23: -1.6797 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: -0.1134 S13: 0.12472 REMARK 3 S21: 0.3991 S22: 0.1002 S23: 0.3863 REMARK 3 S31: -0.1965 S32: -0.0619 S33: -0.133 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 296:329 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.865 -34.536 -2.905 REMARK 3 T TENSOR REMARK 3 T11: 0.3305 T22: 0.7139 REMARK 3 T33: 1.1718 T12: -0.2888 REMARK 3 T13: -0.3234 T23: 0.4990 REMARK 3 L TENSOR REMARK 3 L11: 0.2593 L22: 0.2339 REMARK 3 L33: 1.1349 L12: -0.2388 REMARK 3 L13: 0.3737 L23: -0.1958 REMARK 3 S TENSOR REMARK 3 S11: -0.1403 S12: 0.5336 S13:0.1449040 REMARK 3 S21: -0.4781 S22: 0.4775 S23: 1.1986 REMARK 3 S31: 0.2325 S32: -0.5788 S33:-0.650082 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 330:396 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.657 -14.868 -7.539 REMARK 3 T TENSOR REMARK 3 T11: 0.2514 T22: 0.4068 REMARK 3 T33: 0.7186 T12: -0.0031 REMARK 3 T13: -0.0922 T23: 0.2874 REMARK 3 L TENSOR REMARK 3 L11: 0.7256 L22: 0.5089 REMARK 3 L33: 1.3030 L12: 0.5143 REMARK 3 L13: -0.4801 L23: -0.3760 REMARK 3 S TENSOR REMARK 3 S11: 0.2186 S12: 0.0352 S13: -0.07223 REMARK 3 S21: 0.0731 S22: 0.5644 S23: 1.0639 REMARK 3 S31: -0.2584 S32: -0.5478 S33: -0.43184 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 397:416 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.110 -42.935 6.322 REMARK 3 T TENSOR REMARK 3 T11: 0.4005 T22: 0.5277 REMARK 3 T33: 0.7375 T12: -0.0920 REMARK 3 T13: 0.0187 T23: 0.2587 REMARK 3 L TENSOR REMARK 3 L11: 4.5016 L22: 8.1044 REMARK 3 L33: 4.8791 L12: -0.0426 REMARK 3 L13: 0.3774 L23: 1.1900 REMARK 3 S TENSOR REMARK 3 S11: 0.2233 S12: 0.1458 S13:-0.077190 REMARK 3 S21: 0.2763 S22: 0.0684 S23: 1.6124 REMARK 3 S31: 0.3215 S32: -1.0710 S33: -0.2323 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 501:501 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.198 -31.587 1.823 REMARK 3 T TENSOR REMARK 3 T11: 0.4062 T22: 0.3247 REMARK 3 T33: 0.5032 T12: -0.0371 REMARK 3 T13: -0.0782 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 4.9117 L22: 6.3239 REMARK 3 L33: 4.6505 L12: 2.9486 REMARK 3 L13: 4.7763 L23: 2.7020 REMARK 3 S TENSOR REMARK 3 S11: -0.4970 S12: 0.3481 S13: -0.5921 REMARK 3 S21: -0.0378 S22: 0.0261 S23: 1.16179 REMARK 3 S31: -0.0005 S32: -0.0241 S33: 0.4 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 39NC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-OCT-26. REMARK 100 THE DEPOSITION ID IS D_1000311864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47198 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 64.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.65900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M AMMONIUM ACETATE, 0.085 M REMARK 280 SODIUM ACETATE:HCL, 25.5% (W/V) PEG 4000 AND 15% (V/V) GLYCEROL REMARK 280 AND 10 MM LYSINE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.58867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.17733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.88300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.47167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 9.29433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 ASN A 23 REMARK 465 ALA A 24 REMARK 465 THR A 25 REMARK 465 ASN A 26 REMARK 465 THR A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 ASN A 30 REMARK 465 SER A 31 REMARK 465 THR A 32 REMARK 465 ASN A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 PRO A 36 REMARK 465 ASN A 37 REMARK 465 ASN A 38 REMARK 465 THR A 39 REMARK 465 THR A 40 REMARK 465 ASN A 41 REMARK 465 THR A 42 REMARK 465 THR A 43 REMARK 465 THR A 44 REMARK 465 ASN A 45 REMARK 465 VAL A 46 REMARK 465 THR A 47 REMARK 465 THR A 48 REMARK 465 THR A 49 REMARK 465 SER A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 79 CE NZ REMARK 470 LYS A 88 NZ REMARK 470 LYS A 97 NZ REMARK 470 LYS A 120 CD CE NZ REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 LYS A 182 CE NZ REMARK 470 LYS A 217 CE NZ REMARK 470 ARG A 265 CZ NH1 NH2 REMARK 470 LYS A 314 CD CE NZ REMARK 470 GLN A 318 CG CD OE1 NE2 REMARK 470 LYS A 369 CD CE NZ REMARK 470 LYS A 394 CG CD CE NZ REMARK 470 LYS A 405 CG CD CE NZ REMARK 470 ASP A 406 CG OD1 OD2 REMARK 470 GLN A 409 CG CD OE1 NE2 REMARK 470 LYS A 411 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 295 CA - CB - SG ANGL. DEV. = 7.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 171.59 74.10 REMARK 500 ALA A 104 -154.87 55.58 REMARK 500 SER A 153 32.03 -157.76 REMARK 500 VAL A 290 -60.60 -98.75 REMARK 500 LYS A 292 -132.75 49.42 REMARK 500 LYS A 405 -80.88 -41.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 160 O REMARK 620 2 GLY A 163 O 82.1 REMARK 620 3 VAL A 166 O 98.6 96.6 REMARK 620 4 ILE A 388 O 94.1 163.1 100.3 REMARK 620 5 HOH A 727 O 77.7 70.5 166.9 92.5 REMARK 620 6 HOH A 759 O 176.7 94.6 82.2 88.9 100.7 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC110063 RELATED DB: TARGETTRACK DBREF 39NC A 25 416 UNP Q3MFZ5 Q3MFZ5_TRIV2 25 416 SEQADV 39NC SER A 22 UNP Q3MFZ5 EXPRESSION TAG SEQADV 39NC ASN A 23 UNP Q3MFZ5 EXPRESSION TAG SEQADV 39NC ALA A 24 UNP Q3MFZ5 EXPRESSION TAG SEQADV 39NC SER A 70 UNP Q3MFZ5 LEU 70 ENGINEERED MUTATION SEQADV 39NC ASP A 280 UNP Q3MFZ5 ASN 280 ENGINEERED MUTATION SEQRES 1 A 395 SER ASN ALA THR ASN THR ASP THR ASN SER THR ASN ASN SEQRES 2 A 395 SER PRO ASN ASN THR THR ASN THR THR THR ASN VAL THR SEQRES 3 A 395 THR THR SER ASP LYS ASN THR ILE PRO ILE GLY ILE ALA SEQRES 4 A 395 LEU ALA GLN THR SER ASN VAL ALA LEU SER GLY GLN GLU SEQRES 5 A 395 GLN VAL ALA GLY ALA LYS ILE ALA GLU LYS TYR PHE ASN SEQRES 6 A 395 ASP LYS GLY GLY VAL ASN GLY THR PRO ILE LYS LEU ILE SEQRES 7 A 395 PHE GLN ASP THR ALA GLY ASP GLU ALA GLY THR ILE ASN SEQRES 8 A 395 ALA PHE GLN THR LEU ILE ASN LYS ASP LYS VAL VAL GLY SEQRES 9 A 395 ILE VAL GLY PRO THR LEU SER GLN GLN ALA PHE SER ALA SEQRES 10 A 395 ASN PRO ILE ALA GLU ARG ALA LYS VAL PRO VAL VAL GLY SEQRES 11 A 395 PRO SER ASN THR ALA LYS GLY ILE PRO GLU ILE GLY ASP SEQRES 12 A 395 TYR VAL ALA ARG VAL SER ALA PRO VAL SER VAL VAL ALA SEQRES 13 A 395 PRO ASN SER VAL LYS ALA ALA LEU LYS GLN ASN PRO ASN SEQRES 14 A 395 ILE LYS LYS VAL ALA VAL PHE PHE ALA GLN ASN ASP ALA SEQRES 15 A 395 PHE SER LYS SER GLU THR GLU ILE PHE GLN GLN THR VAL SEQRES 16 A 395 LYS ASP GLN GLY LEU GLU LEU VAL THR VAL GLN LYS PHE SEQRES 17 A 395 GLN THR THR ASP THR ASP PHE GLN SER GLN ALA THR ASN SEQRES 18 A 395 ALA ILE ASN LEU LYS PRO ASP LEU VAL ILE ILE SER GLY SEQRES 19 A 395 LEU ALA ALA ASP GLY GLY ASN LEU VAL ARG GLN LEU ARG SEQRES 20 A 395 GLU LEU GLY TYR GLN GLY ALA ILE ILE GLY GLY ASP GLY SEQRES 21 A 395 LEU ASN THR SER ASN VAL PHE ALA VAL CYS LYS ALA LEU SEQRES 22 A 395 CYS ASP GLY VAL LEU ILE ALA GLN ALA TYR SER PRO GLU SEQRES 23 A 395 TYR THR GLY GLU ILE ASN LYS ALA PHE ARG GLN ALA TYR SEQRES 24 A 395 VAL ASP GLN TYR LYS LYS GLU PRO PRO GLN PHE SER ALA SEQRES 25 A 395 GLN ALA PHE ALA ALA VAL GLN VAL TYR VAL GLU SER LEU SEQRES 26 A 395 LYS ALA LEU ASP THR LYS ASN LYS VAL SER LYS ILE GLN SEQRES 27 A 395 LEU PRO GLU LEU ARG THR GLU LEU ASN LYS GLN LEU LEU SEQRES 28 A 395 THR GLY LYS TYR ASN THR PRO LEU GLY GLU ILE SER PHE SEQRES 29 A 395 THR PRO ILE GLY GLU VAL VAL GLN LYS ASP PHE TYR VAL SEQRES 30 A 395 ALA GLN ILE LYS MSE GLU LYS ASP GLY SER GLN GLY LYS SEQRES 31 A 395 PHE THR PHE LEU LYS MODRES 39NC MSE A 403 MET MODIFIED RESIDUE HET MSE A 403 8 HET LYS A 501 10 HET CL A 502 1 HET MG A 503 1 HETNAM MSE SELENOMETHIONINE HETNAM LYS LYSINE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 LYS C6 H15 N2 O2 1+ FORMUL 3 CL CL 1- FORMUL 4 MG MG 2+ FORMUL 5 HOH *197(H2 O) HELIX 1 AA1 VAL A 67 LYS A 88 1 22 HELIX 2 AA2 ASP A 106 LYS A 120 1 15 HELIX 3 AA3 LEU A 131 LYS A 146 1 16 HELIX 4 AA4 ILE A 159 GLY A 163 5 5 HELIX 5 AA5 PRO A 172 ALA A 177 1 6 HELIX 6 AA6 ALA A 177 ASN A 188 1 12 HELIX 7 AA7 ASP A 202 GLN A 219 1 18 HELIX 8 AA8 PHE A 236 ASN A 245 1 10 HELIX 9 AA9 LEU A 256 LEU A 270 1 15 HELIX 10 AB1 ASP A 280 ASN A 283 5 4 HELIX 11 AB2 THR A 284 ASN A 286 5 3 HELIX 12 AB3 VAL A 287 LYS A 292 1 6 HELIX 13 AB4 ALA A 293 ASP A 296 5 4 HELIX 14 AB5 GLY A 310 LYS A 325 1 16 HELIX 15 AB6 PRO A 329 ASN A 353 1 25 HELIX 16 AB7 LYS A 354 ILE A 358 5 5 HELIX 17 AB8 GLN A 359 GLY A 374 1 16 SHEET 1 AA1 5 ILE A 96 PHE A 100 0 SHEET 2 AA1 5 ILE A 55 ILE A 59 1 N ILE A 57 O ILE A 99 SHEET 3 AA1 5 ILE A 126 VAL A 127 1 O VAL A 127 N GLY A 58 SHEET 4 AA1 5 VAL A 149 GLY A 151 1 O VAL A 150 N ILE A 126 SHEET 5 AA1 5 VAL A 166 ARG A 168 1 O ALA A 167 N GLY A 151 SHEET 1 AA2 4 GLU A 222 PHE A 229 0 SHEET 2 AA2 4 LYS A 193 ALA A 199 1 N VAL A 196 O GLN A 227 SHEET 3 AA2 4 LEU A 250 SER A 254 1 O ILE A 252 N PHE A 197 SHEET 4 AA2 4 ALA A 275 GLY A 278 1 O ILE A 277 N VAL A 251 SHEET 1 AA3 3 LEU A 299 GLN A 302 0 SHEET 2 AA3 3 TYR A 397 MSE A 403 -1 O TYR A 397 N GLN A 302 SHEET 3 AA3 3 GLY A 410 PHE A 414 -1 O LYS A 411 N LYS A 402 SHEET 1 AA4 3 LYS A 375 THR A 378 0 SHEET 2 AA4 3 GLY A 381 PHE A 385 -1 O ILE A 383 N TYR A 376 SHEET 3 AA4 3 VAL A 391 GLN A 393 -1 O VAL A 392 N SER A 384 SSBOND 1 CYS A 291 CYS A 295 1555 1555 2.08 LINK C LYS A 402 N MSE A 403 1555 1555 1.33 LINK C MSE A 403 N GLU A 404 1555 1555 1.33 LINK O PRO A 160 MG MG A 503 1555 1555 2.36 LINK O GLY A 163 MG MG A 503 1555 1555 2.37 LINK O VAL A 166 MG MG A 503 1555 1555 2.41 LINK O ILE A 388 MG MG A 503 1555 1555 2.18 LINK MG MG A 503 O HOH A 727 1555 1555 2.71 LINK MG MG A 503 O HOH A 759 1555 1555 2.34 CISPEP 1 GLY A 128 PRO A 129 0 -8.74 CRYST1 114.005 114.005 55.766 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008772 0.005064 0.000000 0.00000 SCALE2 0.000000 0.010129 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017932 0.00000 CONECT 776 2746 CONECT 800 2746 CONECT 829 2746 CONECT 1766 1794 CONECT 1794 1766 CONECT 2522 2746 CONECT 2630 2637 CONECT 2637 2630 2638 CONECT 2638 2637 2639 2641 CONECT 2639 2638 2640 2645 CONECT 2640 2639 CONECT 2641 2638 2642 CONECT 2642 2641 2643 CONECT 2643 2642 2644 CONECT 2644 2643 CONECT 2645 2639 CONECT 2746 776 800 829 2522 CONECT 2746 2873 2905 CONECT 2873 2746 CONECT 2905 2746 MASTER 423 0 4 17 15 0 0 6 2916 1 20 31 END