data_3A0E
#
_entry.id 3A0E
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3A0E pdb_00003a0e 10.2210/pdb3a0e/pdb
RCSB RCSB028653 ? ?
WWPDB D_1000028653 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2010-03-16
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2012-03-21
4 'Structure model' 1 3 2017-10-04
5 'Structure model' 2 0 2020-07-29
6 'Structure model' 2 1 2023-11-01
7 'Structure model' 2 2 2024-11-13
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Database references'
3 4 'Structure model' 'Data collection'
4 5 'Structure model' 'Atomic model'
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Derived calculations'
7 5 'Structure model' 'Non-polymer description'
8 5 'Structure model' 'Structure summary'
9 6 'Structure model' 'Data collection'
10 6 'Structure model' 'Database references'
11 6 'Structure model' 'Refinement description'
12 6 'Structure model' 'Structure summary'
13 7 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' diffrn_detector
2 5 'Structure model' atom_site
3 5 'Structure model' chem_comp
4 5 'Structure model' entity
5 5 'Structure model' entity_name_com
6 5 'Structure model' pdbx_branch_scheme
7 5 'Structure model' pdbx_chem_comp_identifier
8 5 'Structure model' pdbx_entity_branch
9 5 'Structure model' pdbx_entity_branch_descriptor
10 5 'Structure model' pdbx_entity_branch_link
11 5 'Structure model' pdbx_entity_branch_list
12 5 'Structure model' pdbx_entity_nonpoly
13 5 'Structure model' pdbx_molecule_features
14 5 'Structure model' pdbx_nonpoly_scheme
15 5 'Structure model' struct_conn
16 5 'Structure model' struct_conn_type
17 5 'Structure model' struct_site
18 5 'Structure model' struct_site_gen
19 6 'Structure model' chem_comp
20 6 'Structure model' chem_comp_atom
21 6 'Structure model' chem_comp_bond
22 6 'Structure model' database_2
23 6 'Structure model' pdbx_initial_refinement_model
24 7 'Structure model' pdbx_entry_details
25 7 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_diffrn_detector.detector'
2 5 'Structure model' '_atom_site.B_iso_or_equiv'
3 5 'Structure model' '_atom_site.Cartn_x'
4 5 'Structure model' '_atom_site.Cartn_y'
5 5 'Structure model' '_atom_site.Cartn_z'
6 5 'Structure model' '_atom_site.auth_asym_id'
7 5 'Structure model' '_atom_site.auth_atom_id'
8 5 'Structure model' '_atom_site.auth_comp_id'
9 5 'Structure model' '_atom_site.auth_seq_id'
10 5 'Structure model' '_atom_site.label_atom_id'
11 5 'Structure model' '_atom_site.label_comp_id'
12 5 'Structure model' '_atom_site.type_symbol'
13 5 'Structure model' '_chem_comp.formula'
14 5 'Structure model' '_chem_comp.formula_weight'
15 5 'Structure model' '_chem_comp.id'
16 5 'Structure model' '_chem_comp.name'
17 5 'Structure model' '_chem_comp.type'
18 5 'Structure model' '_entity.formula_weight'
19 5 'Structure model' '_entity.pdbx_description'
20 5 'Structure model' '_entity.type'
21 6 'Structure model' '_chem_comp.pdbx_synonyms'
22 6 'Structure model' '_database_2.pdbx_DOI'
23 6 'Structure model' '_database_2.pdbx_database_accession'
24 7 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3A0E
_pdbx_database_status.recvd_initial_deposition_date 2009-03-16
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3A0C 'Crystal Structure of an anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua' unspecified
PDB 3A0D 'Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with monomannoside' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Ding, J.' 1
'Wang, D.C.' 2
#
_citation.id primary
_citation.title
;Crystal structures of a novel anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua with unique ligand-binding property and super-structure
;
_citation.journal_abbrev J.Struct.Biol.
_citation.journal_volume 171
_citation.page_first 309
_citation.page_last 317
_citation.year 2010
_citation.journal_id_ASTM JSBIEM
_citation.country US
_citation.journal_id_ISSN 1047-8477
_citation.journal_id_CSD 0803
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 20546901
_citation.pdbx_database_id_DOI 10.1016/j.jsb.2010.05.009
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ding, J.' 1 ?
primary 'Bao, J.' 2 ?
primary 'Zhu, D.' 3 ?
primary 'Zhang, Y.' 4 ?
primary 'Wang, D.C.' 5 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'Mannose/sialic acid-binding lectin' 11962.332 1 ? ? 'UNP residues 29-138' ?
2 branched man 'alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose' 342.297 1 ? ? ? ?
3 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ?
4 water nat water 18.015 136 ? ? ? ?
#
_entity_name_com.entity_id 2
_entity_name_com.name 3alpha-alpha-mannobiose
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;VNSLSSPNSLFTGHSLEVGPSYRLIMQGDCNFVLYDSGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKTNG
KEDHYVLVLQQDRNVVIYGPVVWATGSGPA
;
_entity_poly.pdbx_seq_one_letter_code_can
;VNSLSSPNSLFTGHSLEVGPSYRLIMQGDCNFVLYDSGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKTNG
KEDHYVLVLQQDRNVVIYGPVVWATGSGPA
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'SULFATE ION' SO4
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 VAL n
1 2 ASN n
1 3 SER n
1 4 LEU n
1 5 SER n
1 6 SER n
1 7 PRO n
1 8 ASN n
1 9 SER n
1 10 LEU n
1 11 PHE n
1 12 THR n
1 13 GLY n
1 14 HIS n
1 15 SER n
1 16 LEU n
1 17 GLU n
1 18 VAL n
1 19 GLY n
1 20 PRO n
1 21 SER n
1 22 TYR n
1 23 ARG n
1 24 LEU n
1 25 ILE n
1 26 MET n
1 27 GLN n
1 28 GLY n
1 29 ASP n
1 30 CYS n
1 31 ASN n
1 32 PHE n
1 33 VAL n
1 34 LEU n
1 35 TYR n
1 36 ASP n
1 37 SER n
1 38 GLY n
1 39 LYS n
1 40 PRO n
1 41 VAL n
1 42 TRP n
1 43 ALA n
1 44 SER n
1 45 ASN n
1 46 THR n
1 47 GLY n
1 48 GLY n
1 49 LEU n
1 50 GLY n
1 51 SER n
1 52 GLY n
1 53 CYS n
1 54 ARG n
1 55 LEU n
1 56 THR n
1 57 LEU n
1 58 HIS n
1 59 ASN n
1 60 ASN n
1 61 GLY n
1 62 ASN n
1 63 LEU n
1 64 VAL n
1 65 ILE n
1 66 TYR n
1 67 ASP n
1 68 GLN n
1 69 SER n
1 70 ASN n
1 71 ARG n
1 72 VAL n
1 73 ILE n
1 74 TRP n
1 75 GLN n
1 76 THR n
1 77 LYS n
1 78 THR n
1 79 ASN n
1 80 GLY n
1 81 LYS n
1 82 GLU n
1 83 ASP n
1 84 HIS n
1 85 TYR n
1 86 VAL n
1 87 LEU n
1 88 VAL n
1 89 LEU n
1 90 GLN n
1 91 GLN n
1 92 ASP n
1 93 ARG n
1 94 ASN n
1 95 VAL n
1 96 VAL n
1 97 ILE n
1 98 TYR n
1 99 GLY n
1 100 PRO n
1 101 VAL n
1 102 VAL n
1 103 TRP n
1 104 ALA n
1 105 THR n
1 106 GLY n
1 107 SER n
1 108 GLY n
1 109 PRO n
1 110 ALA n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Polygonatum cyrtonema'
_entity_src_nat.pdbx_ncbi_taxonomy_id 195526
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain HUA
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DManpa1-3DManpa1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/1,2,1/[a1122h-1a_1-5]/1-1/a3-b1' WURCS PDB2Glycan 1.1.0
3 2 '[][a-D-Manp]{[(3+1)][a-D-Manp]{}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 2
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 MAN
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 MAN
_pdbx_entity_branch_link.atom_id_2 O3
_pdbx_entity_branch_link.leaving_atom_id_2 HO3
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa
MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose
MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp
MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 VAL 1 1 1 VAL VAL A . n
A 1 2 ASN 2 2 2 ASN ASN A . n
A 1 3 SER 3 3 3 SER SER A . n
A 1 4 LEU 4 4 4 LEU LEU A . n
A 1 5 SER 5 5 5 SER SER A . n
A 1 6 SER 6 6 6 SER SER A . n
A 1 7 PRO 7 7 7 PRO PRO A . n
A 1 8 ASN 8 8 8 ASN ASN A . n
A 1 9 SER 9 9 9 SER SER A . n
A 1 10 LEU 10 10 10 LEU LEU A . n
A 1 11 PHE 11 11 11 PHE PHE A . n
A 1 12 THR 12 12 12 THR THR A . n
A 1 13 GLY 13 13 13 GLY GLY A . n
A 1 14 HIS 14 14 14 HIS HIS A . n
A 1 15 SER 15 15 15 SER SER A . n
A 1 16 LEU 16 16 16 LEU LEU A . n
A 1 17 GLU 17 17 17 GLU GLU A . n
A 1 18 VAL 18 18 18 VAL VAL A . n
A 1 19 GLY 19 19 19 GLY GLY A . n
A 1 20 PRO 20 20 20 PRO PRO A . n
A 1 21 SER 21 21 21 SER SER A . n
A 1 22 TYR 22 22 22 TYR TYR A . n
A 1 23 ARG 23 23 23 ARG ARG A . n
A 1 24 LEU 24 24 24 LEU LEU A . n
A 1 25 ILE 25 25 25 ILE ILE A . n
A 1 26 MET 26 26 26 MET MET A . n
A 1 27 GLN 27 27 27 GLN GLN A . n
A 1 28 GLY 28 28 28 GLY GLY A . n
A 1 29 ASP 29 29 29 ASP ASP A . n
A 1 30 CYS 30 30 30 CYS CYS A . n
A 1 31 ASN 31 31 31 ASN ASN A . n
A 1 32 PHE 32 32 32 PHE PHE A . n
A 1 33 VAL 33 33 33 VAL VAL A . n
A 1 34 LEU 34 34 34 LEU LEU A . n
A 1 35 TYR 35 35 35 TYR TYR A . n
A 1 36 ASP 36 36 36 ASP ASP A . n
A 1 37 SER 37 37 37 SER SER A . n
A 1 38 GLY 38 38 38 GLY GLY A . n
A 1 39 LYS 39 39 39 LYS LYS A . n
A 1 40 PRO 40 40 40 PRO PRO A . n
A 1 41 VAL 41 41 41 VAL VAL A . n
A 1 42 TRP 42 42 42 TRP TRP A . n
A 1 43 ALA 43 43 43 ALA ALA A . n
A 1 44 SER 44 44 44 SER SER A . n
A 1 45 ASN 45 45 45 ASN ASN A . n
A 1 46 THR 46 46 46 THR THR A . n
A 1 47 GLY 47 47 47 GLY GLY A . n
A 1 48 GLY 48 48 48 GLY GLY A . n
A 1 49 LEU 49 49 49 LEU LEU A . n
A 1 50 GLY 50 50 50 GLY GLY A . n
A 1 51 SER 51 51 51 SER SER A . n
A 1 52 GLY 52 52 52 GLY GLY A . n
A 1 53 CYS 53 53 53 CYS CYS A . n
A 1 54 ARG 54 54 54 ARG ARG A . n
A 1 55 LEU 55 55 55 LEU LEU A . n
A 1 56 THR 56 56 56 THR THR A . n
A 1 57 LEU 57 57 57 LEU LEU A . n
A 1 58 HIS 58 58 58 HIS HIS A . n
A 1 59 ASN 59 59 59 ASN ASN A . n
A 1 60 ASN 60 60 60 ASN ASN A . n
A 1 61 GLY 61 61 61 GLY GLY A . n
A 1 62 ASN 62 62 62 ASN ASN A . n
A 1 63 LEU 63 63 63 LEU LEU A . n
A 1 64 VAL 64 64 64 VAL VAL A . n
A 1 65 ILE 65 65 65 ILE ILE A . n
A 1 66 TYR 66 66 66 TYR TYR A . n
A 1 67 ASP 67 67 67 ASP ASP A . n
A 1 68 GLN 68 68 68 GLN GLN A . n
A 1 69 SER 69 69 69 SER SER A . n
A 1 70 ASN 70 70 70 ASN ASN A . n
A 1 71 ARG 71 71 71 ARG ARG A . n
A 1 72 VAL 72 72 72 VAL VAL A . n
A 1 73 ILE 73 73 73 ILE ILE A . n
A 1 74 TRP 74 74 74 TRP TRP A . n
A 1 75 GLN 75 75 75 GLN GLN A . n
A 1 76 THR 76 76 76 THR THR A . n
A 1 77 LYS 77 77 77 LYS LYS A . n
A 1 78 THR 78 78 78 THR THR A . n
A 1 79 ASN 79 79 79 ASN ASN A . n
A 1 80 GLY 80 80 80 GLY GLY A . n
A 1 81 LYS 81 81 81 LYS LYS A . n
A 1 82 GLU 82 82 82 GLU GLU A . n
A 1 83 ASP 83 83 83 ASP ASP A . n
A 1 84 HIS 84 84 84 HIS HIS A . n
A 1 85 TYR 85 85 85 TYR TYR A . n
A 1 86 VAL 86 86 86 VAL VAL A . n
A 1 87 LEU 87 87 87 LEU LEU A . n
A 1 88 VAL 88 88 88 VAL VAL A . n
A 1 89 LEU 89 89 89 LEU LEU A . n
A 1 90 GLN 90 90 90 GLN GLN A . n
A 1 91 GLN 91 91 91 GLN GLN A . n
A 1 92 ASP 92 92 92 ASP ASP A . n
A 1 93 ARG 93 93 93 ARG ARG A . n
A 1 94 ASN 94 94 94 ASN ASN A . n
A 1 95 VAL 95 95 95 VAL VAL A . n
A 1 96 VAL 96 96 96 VAL VAL A . n
A 1 97 ILE 97 97 97 ILE ILE A . n
A 1 98 TYR 98 98 98 TYR TYR A . n
A 1 99 GLY 99 99 99 GLY GLY A . n
A 1 100 PRO 100 100 100 PRO PRO A . n
A 1 101 VAL 101 101 101 VAL VAL A . n
A 1 102 VAL 102 102 102 VAL VAL A . n
A 1 103 TRP 103 103 103 TRP TRP A . n
A 1 104 ALA 104 104 104 ALA ALA A . n
A 1 105 THR 105 105 105 THR THR A . n
A 1 106 GLY 106 106 106 GLY GLY A . n
A 1 107 SER 107 107 107 SER SER A . n
A 1 108 GLY 108 108 108 GLY GLY A . n
A 1 109 PRO 109 109 109 PRO PRO A . n
A 1 110 ALA 110 110 110 ALA ALA A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 MAN 1 B MAN 1 B M3M 1 n
B 2 MAN 2 B MAN 2 B M3M 1 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 1 112 1 SO4 SO4 A .
D 3 SO4 1 113 2 SO4 SO4 A .
E 3 SO4 1 114 3 SO4 SO4 A .
F 3 SO4 1 115 4 SO4 SO4 A .
G 3 SO4 1 116 5 SO4 SO4 A .
H 4 HOH 1 117 117 HOH HOH A .
H 4 HOH 2 118 118 HOH HOH A .
H 4 HOH 3 119 119 HOH HOH A .
H 4 HOH 4 120 120 HOH HOH A .
H 4 HOH 5 121 121 HOH HOH A .
H 4 HOH 6 122 122 HOH HOH A .
H 4 HOH 7 123 123 HOH HOH A .
H 4 HOH 8 124 124 HOH HOH A .
H 4 HOH 9 125 125 HOH HOH A .
H 4 HOH 10 126 126 HOH HOH A .
H 4 HOH 11 127 127 HOH HOH A .
H 4 HOH 12 128 1 HOH HOH A .
H 4 HOH 13 129 129 HOH HOH A .
H 4 HOH 14 130 130 HOH HOH A .
H 4 HOH 15 131 131 HOH HOH A .
H 4 HOH 16 132 132 HOH HOH A .
H 4 HOH 17 133 133 HOH HOH A .
H 4 HOH 18 134 134 HOH HOH A .
H 4 HOH 19 135 135 HOH HOH A .
H 4 HOH 20 136 136 HOH HOH A .
H 4 HOH 21 137 137 HOH HOH A .
H 4 HOH 22 138 138 HOH HOH A .
H 4 HOH 23 139 139 HOH HOH A .
H 4 HOH 24 140 140 HOH HOH A .
H 4 HOH 25 141 141 HOH HOH A .
H 4 HOH 26 142 2 HOH HOH A .
H 4 HOH 27 143 3 HOH HOH A .
H 4 HOH 28 144 4 HOH HOH A .
H 4 HOH 29 145 5 HOH HOH A .
H 4 HOH 30 146 6 HOH HOH A .
H 4 HOH 31 147 7 HOH HOH A .
H 4 HOH 32 148 8 HOH HOH A .
H 4 HOH 33 149 9 HOH HOH A .
H 4 HOH 34 150 10 HOH HOH A .
H 4 HOH 35 151 11 HOH HOH A .
H 4 HOH 36 152 12 HOH HOH A .
H 4 HOH 37 153 13 HOH HOH A .
H 4 HOH 38 154 14 HOH HOH A .
H 4 HOH 39 155 15 HOH HOH A .
H 4 HOH 40 156 16 HOH HOH A .
H 4 HOH 41 157 17 HOH HOH A .
H 4 HOH 42 158 18 HOH HOH A .
H 4 HOH 43 159 19 HOH HOH A .
H 4 HOH 44 160 20 HOH HOH A .
H 4 HOH 45 161 21 HOH HOH A .
H 4 HOH 46 162 22 HOH HOH A .
H 4 HOH 47 163 23 HOH HOH A .
H 4 HOH 48 164 24 HOH HOH A .
H 4 HOH 49 165 25 HOH HOH A .
H 4 HOH 50 166 26 HOH HOH A .
H 4 HOH 51 167 27 HOH HOH A .
H 4 HOH 52 168 28 HOH HOH A .
H 4 HOH 53 169 29 HOH HOH A .
H 4 HOH 54 170 30 HOH HOH A .
H 4 HOH 55 171 31 HOH HOH A .
H 4 HOH 56 172 32 HOH HOH A .
H 4 HOH 57 173 33 HOH HOH A .
H 4 HOH 58 174 34 HOH HOH A .
H 4 HOH 59 175 35 HOH HOH A .
H 4 HOH 60 176 36 HOH HOH A .
H 4 HOH 61 177 37 HOH HOH A .
H 4 HOH 62 178 38 HOH HOH A .
H 4 HOH 63 179 39 HOH HOH A .
H 4 HOH 64 180 40 HOH HOH A .
H 4 HOH 65 181 41 HOH HOH A .
H 4 HOH 66 182 42 HOH HOH A .
H 4 HOH 67 183 43 HOH HOH A .
H 4 HOH 68 184 44 HOH HOH A .
H 4 HOH 69 185 45 HOH HOH A .
H 4 HOH 70 186 46 HOH HOH A .
H 4 HOH 71 187 47 HOH HOH A .
H 4 HOH 72 188 48 HOH HOH A .
H 4 HOH 73 189 49 HOH HOH A .
H 4 HOH 74 190 50 HOH HOH A .
H 4 HOH 75 191 51 HOH HOH A .
H 4 HOH 76 192 52 HOH HOH A .
H 4 HOH 77 193 53 HOH HOH A .
H 4 HOH 78 194 54 HOH HOH A .
H 4 HOH 79 195 55 HOH HOH A .
H 4 HOH 80 196 56 HOH HOH A .
H 4 HOH 81 197 57 HOH HOH A .
H 4 HOH 82 198 58 HOH HOH A .
H 4 HOH 83 199 59 HOH HOH A .
H 4 HOH 84 200 60 HOH HOH A .
H 4 HOH 85 201 61 HOH HOH A .
H 4 HOH 86 202 62 HOH HOH A .
H 4 HOH 87 203 63 HOH HOH A .
H 4 HOH 88 204 64 HOH HOH A .
H 4 HOH 89 205 65 HOH HOH A .
H 4 HOH 90 206 66 HOH HOH A .
H 4 HOH 91 207 67 HOH HOH A .
H 4 HOH 92 208 68 HOH HOH A .
H 4 HOH 93 209 69 HOH HOH A .
H 4 HOH 94 210 70 HOH HOH A .
H 4 HOH 95 211 71 HOH HOH A .
H 4 HOH 96 212 72 HOH HOH A .
H 4 HOH 97 213 73 HOH HOH A .
H 4 HOH 98 214 74 HOH HOH A .
H 4 HOH 99 215 75 HOH HOH A .
H 4 HOH 100 216 76 HOH HOH A .
H 4 HOH 101 217 77 HOH HOH A .
H 4 HOH 102 218 78 HOH HOH A .
H 4 HOH 103 219 79 HOH HOH A .
H 4 HOH 104 220 80 HOH HOH A .
H 4 HOH 105 221 81 HOH HOH A .
H 4 HOH 106 222 82 HOH HOH A .
H 4 HOH 107 223 83 HOH HOH A .
H 4 HOH 108 224 84 HOH HOH A .
H 4 HOH 109 225 85 HOH HOH A .
H 4 HOH 110 226 86 HOH HOH A .
H 4 HOH 111 227 87 HOH HOH A .
H 4 HOH 112 228 88 HOH HOH A .
H 4 HOH 113 229 89 HOH HOH A .
H 4 HOH 114 230 90 HOH HOH A .
H 4 HOH 115 231 92 HOH HOH A .
H 4 HOH 116 232 94 HOH HOH A .
H 4 HOH 117 233 95 HOH HOH A .
H 4 HOH 118 234 96 HOH HOH A .
H 4 HOH 119 235 97 HOH HOH A .
H 4 HOH 120 236 98 HOH HOH A .
H 4 HOH 121 237 99 HOH HOH A .
H 4 HOH 122 238 100 HOH HOH A .
H 4 HOH 123 239 101 HOH HOH A .
H 4 HOH 124 240 102 HOH HOH A .
H 4 HOH 125 241 103 HOH HOH A .
H 4 HOH 126 242 104 HOH HOH A .
H 4 HOH 127 243 106 HOH HOH A .
H 4 HOH 128 244 107 HOH HOH A .
H 4 HOH 129 245 108 HOH HOH A .
H 4 HOH 130 246 109 HOH HOH A .
H 4 HOH 131 247 110 HOH HOH A .
H 4 HOH 132 248 111 HOH HOH A .
H 4 HOH 133 249 112 HOH HOH A .
H 4 HOH 134 250 113 HOH HOH A .
H 4 HOH 135 251 114 HOH HOH A .
H 4 HOH 136 252 116 HOH HOH A .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
_software.date
_software.type
_software.location
_software.language
PHASER phasing . ? 1 ? ? ? ?
CNS refinement 1.2 ? 2 ? ? ? ?
MOSFLM 'data reduction' . ? 3 ? ? ? ?
SCALA 'data scaling' . ? 4 ? ? ? ?
#
_cell.entry_id 3A0E
_cell.length_a 76.660
_cell.length_b 76.660
_cell.length_c 61.401
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3A0E
_symmetry.space_group_name_H-M 'P 32 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 154
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3A0E
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 4.35
_exptl_crystal.density_percent_sol 71.75
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pdbx_details '1.0M LiSO4, 2% PEG8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'MAR555 FLAT PANEL'
_diffrn_detector.pdbx_collection_date 2008-03-10
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'BSRF BEAMLINE 1W2B'
_diffrn_source.pdbx_synchrotron_site BSRF
_diffrn_source.pdbx_synchrotron_beamline 1W2B
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.entry_id 3A0E
_reflns.observed_criterion_sigma_F 0.0
_reflns.observed_criterion_sigma_I 0.0
_reflns.d_resolution_high 2.00
_reflns.d_resolution_low 45.08
_reflns.number_all 14440
_reflns.number_obs 14437
_reflns.percent_possible_obs 100
_reflns.pdbx_Rmerge_I_obs 0.076
_reflns.pdbx_Rsym_value 0.076
_reflns.pdbx_netI_over_sigmaI ?
_reflns.B_iso_Wilson_estimate 24.96
_reflns.pdbx_redundancy 13.9
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 2.00
_reflns_shell.d_res_low 2.11
_reflns_shell.percent_possible_all 100
_reflns_shell.Rmerge_I_obs 0.265
_reflns_shell.pdbx_Rsym_value 0.265
_reflns_shell.meanI_over_sigI_obs 8.0
_reflns_shell.pdbx_redundancy 14.0
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 2066
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 3A0E
_refine.ls_d_res_high 2.00
_refine.ls_d_res_low 45.08
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_ls_sigma_I 0.0
_refine.ls_number_reflns_all 14440
_refine.ls_number_reflns_obs 14437
_refine.ls_number_reflns_R_free 1468
_refine.ls_percent_reflns_obs 100
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.190
_refine.ls_R_factor_R_work 0.190
_refine.ls_R_factor_R_free 0.212
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 'PDB ENTRY 3A0D'
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model Isotropic
_refine.B_iso_mean 24.4
_refine.aniso_B[1][1] -1.528
_refine.aniso_B[2][2] -1.528
_refine.aniso_B[3][3] 3.055
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] 0.000
_refine.details ?
_refine.B_iso_min 10.03
_refine.B_iso_max 69.87
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_ML ?
_refine.overall_SU_B ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3A0E
_refine_analyze.Luzzati_coordinate_error_obs 0.22
_refine_analyze.Luzzati_sigma_a_obs 0.09
_refine_analyze.Luzzati_d_res_low_obs 5.0
_refine_analyze.Luzzati_coordinate_error_free 0.25
_refine_analyze.Luzzati_sigma_a_free 0.11
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 843
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 48
_refine_hist.number_atoms_solvent 136
_refine_hist.number_atoms_total 1027
_refine_hist.d_res_high 2.00
_refine_hist.d_res_low 45.08
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d 0.0055 ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg 1.47 ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d 26.66 ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d 0.89 ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used ?
_refine_ls_shell.d_res_high 2.00
_refine_ls_shell.d_res_low 2.07
_refine_ls_shell.number_reflns_R_work ?
_refine_ls_shell.R_factor_R_work 0.202
_refine_ls_shell.percent_reflns_obs 100
_refine_ls_shell.R_factor_R_free 0.233
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 140
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs 1422
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 3A0E
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3A0E
_struct.title 'Crystal Structure of Polygonatum cyrtonema lectin (PCL) complexed with dimannoside'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3A0E
_struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN'
_struct_keywords.text 'beta-prism II, Lectin, SUGAR BINDING PROTEIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 3 ?
E N N 3 ?
F N N 3 ?
G N N 3 ?
H N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code Q8L568_9ASPA
_struct_ref.pdbx_db_accession Q8L568
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;VNSLSSPNSLFTGHSLEVGPSYRLIMPGDCNFVLYDSGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKTNG
KEDHYVLVLQQDRNVVIYGPVVWATGSGPA
;
_struct_ref.pdbx_align_begin 29
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3A0E
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 110
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession Q8L568
_struct_ref_seq.db_align_beg 29
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 138
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 110
#
_struct_ref_seq_dif.align_id 1
_struct_ref_seq_dif.pdbx_pdb_id_code 3A0E
_struct_ref_seq_dif.mon_id GLN
_struct_ref_seq_dif.pdbx_pdb_strand_id A
_struct_ref_seq_dif.seq_num 27
_struct_ref_seq_dif.pdbx_pdb_ins_code ?
_struct_ref_seq_dif.pdbx_seq_db_name UNP
_struct_ref_seq_dif.pdbx_seq_db_accession_code Q8L568
_struct_ref_seq_dif.db_mon_id PRO
_struct_ref_seq_dif.pdbx_seq_db_seq_num 55
_struct_ref_seq_dif.details 'SEE REMARK 999'
_struct_ref_seq_dif.pdbx_auth_seq_num 27
_struct_ref_seq_dif.pdbx_ordinal 1
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 5320 ?
1 MORE -134 ?
1 'SSA (A^2)' 9680 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038
0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -20.4670000000
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 30 A CYS 53 1_555 ? ? ? ? ? ? ? 2.029 ? ?
covale1 covale both ? B MAN . O3 ? ? ? 1_555 B MAN . C1 ? ? B MAN 1 B MAN 2 1_555 ? ? ? ? ? ? ? 1.442 sing ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
_pdbx_modification_feature.ordinal 1
_pdbx_modification_feature.label_comp_id CYS
_pdbx_modification_feature.label_asym_id A
_pdbx_modification_feature.label_seq_id 30
_pdbx_modification_feature.label_alt_id ?
_pdbx_modification_feature.modified_residue_label_comp_id CYS
_pdbx_modification_feature.modified_residue_label_asym_id A
_pdbx_modification_feature.modified_residue_label_seq_id 53
_pdbx_modification_feature.modified_residue_label_alt_id ?
_pdbx_modification_feature.auth_comp_id CYS
_pdbx_modification_feature.auth_asym_id A
_pdbx_modification_feature.auth_seq_id 30
_pdbx_modification_feature.PDB_ins_code ?
_pdbx_modification_feature.symmetry 1_555
_pdbx_modification_feature.modified_residue_auth_comp_id CYS
_pdbx_modification_feature.modified_residue_auth_asym_id A
_pdbx_modification_feature.modified_residue_auth_seq_id 53
_pdbx_modification_feature.modified_residue_PDB_ins_code ?
_pdbx_modification_feature.modified_residue_symmetry 1_555
_pdbx_modification_feature.comp_id_linking_atom SG
_pdbx_modification_feature.modified_residue_id_linking_atom SG
_pdbx_modification_feature.modified_residue_id .
_pdbx_modification_feature.ref_pcm_id .
_pdbx_modification_feature.ref_comp_id .
_pdbx_modification_feature.type None
_pdbx_modification_feature.category 'Disulfide bridge'
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 SER 6 A . ? SER 6 A PRO 7 A ? PRO 7 A 1 0.11
2 GLY 19 A . ? GLY 19 A PRO 20 A ? PRO 20 A 1 -0.14
3 GLY 99 A . ? GLY 99 A PRO 100 A ? PRO 100 A 1 0.22
4 GLY 108 A . ? GLY 108 A PRO 109 A ? PRO 109 A 1 -0.03
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 3 ?
B ? 4 ?
C ? 4 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
C 1 2 ? anti-parallel
C 2 3 ? anti-parallel
C 3 4 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 SER A 3 ? SER A 5 ? SER A 3 SER A 5
A 2 VAL A 86 ? LEU A 89 ? VAL A 86 LEU A 89
A 3 VAL A 95 ? TYR A 98 ? VAL A 95 TYR A 98
B 1 SER A 9 ? LEU A 10 ? SER A 9 LEU A 10
B 2 ARG A 54 ? LEU A 57 ? ARG A 54 LEU A 57
B 3 LEU A 63 ? TYR A 66 ? LEU A 63 TYR A 66
B 4 VAL A 72 ? GLN A 75 ? VAL A 72 GLN A 75
C 1 SER A 15 ? VAL A 18 ? SER A 15 VAL A 18
C 2 TYR A 22 ? MET A 26 ? TYR A 22 MET A 26
C 3 PHE A 32 ? ASP A 36 ? PHE A 32 ASP A 36
C 4 LYS A 39 ? ALA A 43 ? LYS A 39 ALA A 43
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N LEU A 4 ? N LEU A 4 O LEU A 87 ? O LEU A 87
A 2 3 N VAL A 88 ? N VAL A 88 O VAL A 96 ? O VAL A 96
B 1 2 N LEU A 10 ? N LEU A 10 O LEU A 55 ? O LEU A 55
B 2 3 N THR A 56 ? N THR A 56 O VAL A 64 ? O VAL A 64
B 3 4 N ILE A 65 ? N ILE A 65 O ILE A 73 ? O ILE A 73
C 1 2 N LEU A 16 ? N LEU A 16 O LEU A 24 ? O LEU A 24
C 2 3 N ARG A 23 ? N ARG A 23 O TYR A 35 ? O TYR A 35
C 3 4 N ASP A 36 ? N ASP A 36 O LYS A 39 ? O LYS A 39
#
_pdbx_entry_details.entry_id 3A0E
_pdbx_entry_details.sequence_details
;THE CONFLICT BETWEEN THE SEQUENCE OF THE PROTEIN AND DATABASE (UNP Q8L568; Q8L568_9ASP) MAY BE ARISED FROM THE NATURAL MUTATION IN THE PROTEIN OR THE ERRORS IN CDNA SEQEUNCING.
;
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 121
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 121
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 6_554
_pdbx_validate_symm_contact.dist 2.07
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ASN A 59 ? ? -67.81 3.54
2 1 THR A 78 ? ? -108.77 77.00
3 1 ASP A 83 ? ? -168.13 -127.09
4 1 ARG A 93 ? ? 75.41 -0.67
5 1 PRO A 100 ? ? -76.93 -165.68
#
_pdbx_molecule_features.prd_id PRD_900112
_pdbx_molecule_features.name 3alpha-alpha-mannobiose
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Metabolism
_pdbx_molecule_features.details oligosaccharide
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_900112
_pdbx_molecule.asym_id B
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLN N N N N 88
GLN CA C N S 89
GLN C C N N 90
GLN O O N N 91
GLN CB C N N 92
GLN CG C N N 93
GLN CD C N N 94
GLN OE1 O N N 95
GLN NE2 N N N 96
GLN OXT O N N 97
GLN H H N N 98
GLN H2 H N N 99
GLN HA H N N 100
GLN HB2 H N N 101
GLN HB3 H N N 102
GLN HG2 H N N 103
GLN HG3 H N N 104
GLN HE21 H N N 105
GLN HE22 H N N 106
GLN HXT H N N 107
GLU N N N N 108
GLU CA C N S 109
GLU C C N N 110
GLU O O N N 111
GLU CB C N N 112
GLU CG C N N 113
GLU CD C N N 114
GLU OE1 O N N 115
GLU OE2 O N N 116
GLU OXT O N N 117
GLU H H N N 118
GLU H2 H N N 119
GLU HA H N N 120
GLU HB2 H N N 121
GLU HB3 H N N 122
GLU HG2 H N N 123
GLU HG3 H N N 124
GLU HE2 H N N 125
GLU HXT H N N 126
GLY N N N N 127
GLY CA C N N 128
GLY C C N N 129
GLY O O N N 130
GLY OXT O N N 131
GLY H H N N 132
GLY H2 H N N 133
GLY HA2 H N N 134
GLY HA3 H N N 135
GLY HXT H N N 136
HIS N N N N 137
HIS CA C N S 138
HIS C C N N 139
HIS O O N N 140
HIS CB C N N 141
HIS CG C Y N 142
HIS ND1 N Y N 143
HIS CD2 C Y N 144
HIS CE1 C Y N 145
HIS NE2 N Y N 146
HIS OXT O N N 147
HIS H H N N 148
HIS H2 H N N 149
HIS HA H N N 150
HIS HB2 H N N 151
HIS HB3 H N N 152
HIS HD1 H N N 153
HIS HD2 H N N 154
HIS HE1 H N N 155
HIS HE2 H N N 156
HIS HXT H N N 157
HOH O O N N 158
HOH H1 H N N 159
HOH H2 H N N 160
ILE N N N N 161
ILE CA C N S 162
ILE C C N N 163
ILE O O N N 164
ILE CB C N S 165
ILE CG1 C N N 166
ILE CG2 C N N 167
ILE CD1 C N N 168
ILE OXT O N N 169
ILE H H N N 170
ILE H2 H N N 171
ILE HA H N N 172
ILE HB H N N 173
ILE HG12 H N N 174
ILE HG13 H N N 175
ILE HG21 H N N 176
ILE HG22 H N N 177
ILE HG23 H N N 178
ILE HD11 H N N 179
ILE HD12 H N N 180
ILE HD13 H N N 181
ILE HXT H N N 182
LEU N N N N 183
LEU CA C N S 184
LEU C C N N 185
LEU O O N N 186
LEU CB C N N 187
LEU CG C N N 188
LEU CD1 C N N 189
LEU CD2 C N N 190
LEU OXT O N N 191
LEU H H N N 192
LEU H2 H N N 193
LEU HA H N N 194
LEU HB2 H N N 195
LEU HB3 H N N 196
LEU HG H N N 197
LEU HD11 H N N 198
LEU HD12 H N N 199
LEU HD13 H N N 200
LEU HD21 H N N 201
LEU HD22 H N N 202
LEU HD23 H N N 203
LEU HXT H N N 204
LYS N N N N 205
LYS CA C N S 206
LYS C C N N 207
LYS O O N N 208
LYS CB C N N 209
LYS CG C N N 210
LYS CD C N N 211
LYS CE C N N 212
LYS NZ N N N 213
LYS OXT O N N 214
LYS H H N N 215
LYS H2 H N N 216
LYS HA H N N 217
LYS HB2 H N N 218
LYS HB3 H N N 219
LYS HG2 H N N 220
LYS HG3 H N N 221
LYS HD2 H N N 222
LYS HD3 H N N 223
LYS HE2 H N N 224
LYS HE3 H N N 225
LYS HZ1 H N N 226
LYS HZ2 H N N 227
LYS HZ3 H N N 228
LYS HXT H N N 229
MAN C1 C N S 230
MAN C2 C N S 231
MAN C3 C N S 232
MAN C4 C N S 233
MAN C5 C N R 234
MAN C6 C N N 235
MAN O1 O N N 236
MAN O2 O N N 237
MAN O3 O N N 238
MAN O4 O N N 239
MAN O5 O N N 240
MAN O6 O N N 241
MAN H1 H N N 242
MAN H2 H N N 243
MAN H3 H N N 244
MAN H4 H N N 245
MAN H5 H N N 246
MAN H61 H N N 247
MAN H62 H N N 248
MAN HO1 H N N 249
MAN HO2 H N N 250
MAN HO3 H N N 251
MAN HO4 H N N 252
MAN HO6 H N N 253
MET N N N N 254
MET CA C N S 255
MET C C N N 256
MET O O N N 257
MET CB C N N 258
MET CG C N N 259
MET SD S N N 260
MET CE C N N 261
MET OXT O N N 262
MET H H N N 263
MET H2 H N N 264
MET HA H N N 265
MET HB2 H N N 266
MET HB3 H N N 267
MET HG2 H N N 268
MET HG3 H N N 269
MET HE1 H N N 270
MET HE2 H N N 271
MET HE3 H N N 272
MET HXT H N N 273
PHE N N N N 274
PHE CA C N S 275
PHE C C N N 276
PHE O O N N 277
PHE CB C N N 278
PHE CG C Y N 279
PHE CD1 C Y N 280
PHE CD2 C Y N 281
PHE CE1 C Y N 282
PHE CE2 C Y N 283
PHE CZ C Y N 284
PHE OXT O N N 285
PHE H H N N 286
PHE H2 H N N 287
PHE HA H N N 288
PHE HB2 H N N 289
PHE HB3 H N N 290
PHE HD1 H N N 291
PHE HD2 H N N 292
PHE HE1 H N N 293
PHE HE2 H N N 294
PHE HZ H N N 295
PHE HXT H N N 296
PRO N N N N 297
PRO CA C N S 298
PRO C C N N 299
PRO O O N N 300
PRO CB C N N 301
PRO CG C N N 302
PRO CD C N N 303
PRO OXT O N N 304
PRO H H N N 305
PRO HA H N N 306
PRO HB2 H N N 307
PRO HB3 H N N 308
PRO HG2 H N N 309
PRO HG3 H N N 310
PRO HD2 H N N 311
PRO HD3 H N N 312
PRO HXT H N N 313
SER N N N N 314
SER CA C N S 315
SER C C N N 316
SER O O N N 317
SER CB C N N 318
SER OG O N N 319
SER OXT O N N 320
SER H H N N 321
SER H2 H N N 322
SER HA H N N 323
SER HB2 H N N 324
SER HB3 H N N 325
SER HG H N N 326
SER HXT H N N 327
SO4 S S N N 328
SO4 O1 O N N 329
SO4 O2 O N N 330
SO4 O3 O N N 331
SO4 O4 O N N 332
THR N N N N 333
THR CA C N S 334
THR C C N N 335
THR O O N N 336
THR CB C N R 337
THR OG1 O N N 338
THR CG2 C N N 339
THR OXT O N N 340
THR H H N N 341
THR H2 H N N 342
THR HA H N N 343
THR HB H N N 344
THR HG1 H N N 345
THR HG21 H N N 346
THR HG22 H N N 347
THR HG23 H N N 348
THR HXT H N N 349
TRP N N N N 350
TRP CA C N S 351
TRP C C N N 352
TRP O O N N 353
TRP CB C N N 354
TRP CG C Y N 355
TRP CD1 C Y N 356
TRP CD2 C Y N 357
TRP NE1 N Y N 358
TRP CE2 C Y N 359
TRP CE3 C Y N 360
TRP CZ2 C Y N 361
TRP CZ3 C Y N 362
TRP CH2 C Y N 363
TRP OXT O N N 364
TRP H H N N 365
TRP H2 H N N 366
TRP HA H N N 367
TRP HB2 H N N 368
TRP HB3 H N N 369
TRP HD1 H N N 370
TRP HE1 H N N 371
TRP HE3 H N N 372
TRP HZ2 H N N 373
TRP HZ3 H N N 374
TRP HH2 H N N 375
TRP HXT H N N 376
TYR N N N N 377
TYR CA C N S 378
TYR C C N N 379
TYR O O N N 380
TYR CB C N N 381
TYR CG C Y N 382
TYR CD1 C Y N 383
TYR CD2 C Y N 384
TYR CE1 C Y N 385
TYR CE2 C Y N 386
TYR CZ C Y N 387
TYR OH O N N 388
TYR OXT O N N 389
TYR H H N N 390
TYR H2 H N N 391
TYR HA H N N 392
TYR HB2 H N N 393
TYR HB3 H N N 394
TYR HD1 H N N 395
TYR HD2 H N N 396
TYR HE1 H N N 397
TYR HE2 H N N 398
TYR HH H N N 399
TYR HXT H N N 400
VAL N N N N 401
VAL CA C N S 402
VAL C C N N 403
VAL O O N N 404
VAL CB C N N 405
VAL CG1 C N N 406
VAL CG2 C N N 407
VAL OXT O N N 408
VAL H H N N 409
VAL H2 H N N 410
VAL HA H N N 411
VAL HB H N N 412
VAL HG11 H N N 413
VAL HG12 H N N 414
VAL HG13 H N N 415
VAL HG21 H N N 416
VAL HG22 H N N 417
VAL HG23 H N N 418
VAL HXT H N N 419
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
ILE N CA sing N N 152
ILE N H sing N N 153
ILE N H2 sing N N 154
ILE CA C sing N N 155
ILE CA CB sing N N 156
ILE CA HA sing N N 157
ILE C O doub N N 158
ILE C OXT sing N N 159
ILE CB CG1 sing N N 160
ILE CB CG2 sing N N 161
ILE CB HB sing N N 162
ILE CG1 CD1 sing N N 163
ILE CG1 HG12 sing N N 164
ILE CG1 HG13 sing N N 165
ILE CG2 HG21 sing N N 166
ILE CG2 HG22 sing N N 167
ILE CG2 HG23 sing N N 168
ILE CD1 HD11 sing N N 169
ILE CD1 HD12 sing N N 170
ILE CD1 HD13 sing N N 171
ILE OXT HXT sing N N 172
LEU N CA sing N N 173
LEU N H sing N N 174
LEU N H2 sing N N 175
LEU CA C sing N N 176
LEU CA CB sing N N 177
LEU CA HA sing N N 178
LEU C O doub N N 179
LEU C OXT sing N N 180
LEU CB CG sing N N 181
LEU CB HB2 sing N N 182
LEU CB HB3 sing N N 183
LEU CG CD1 sing N N 184
LEU CG CD2 sing N N 185
LEU CG HG sing N N 186
LEU CD1 HD11 sing N N 187
LEU CD1 HD12 sing N N 188
LEU CD1 HD13 sing N N 189
LEU CD2 HD21 sing N N 190
LEU CD2 HD22 sing N N 191
LEU CD2 HD23 sing N N 192
LEU OXT HXT sing N N 193
LYS N CA sing N N 194
LYS N H sing N N 195
LYS N H2 sing N N 196
LYS CA C sing N N 197
LYS CA CB sing N N 198
LYS CA HA sing N N 199
LYS C O doub N N 200
LYS C OXT sing N N 201
LYS CB CG sing N N 202
LYS CB HB2 sing N N 203
LYS CB HB3 sing N N 204
LYS CG CD sing N N 205
LYS CG HG2 sing N N 206
LYS CG HG3 sing N N 207
LYS CD CE sing N N 208
LYS CD HD2 sing N N 209
LYS CD HD3 sing N N 210
LYS CE NZ sing N N 211
LYS CE HE2 sing N N 212
LYS CE HE3 sing N N 213
LYS NZ HZ1 sing N N 214
LYS NZ HZ2 sing N N 215
LYS NZ HZ3 sing N N 216
LYS OXT HXT sing N N 217
MAN C1 C2 sing N N 218
MAN C1 O1 sing N N 219
MAN C1 O5 sing N N 220
MAN C1 H1 sing N N 221
MAN C2 C3 sing N N 222
MAN C2 O2 sing N N 223
MAN C2 H2 sing N N 224
MAN C3 C4 sing N N 225
MAN C3 O3 sing N N 226
MAN C3 H3 sing N N 227
MAN C4 C5 sing N N 228
MAN C4 O4 sing N N 229
MAN C4 H4 sing N N 230
MAN C5 C6 sing N N 231
MAN C5 O5 sing N N 232
MAN C5 H5 sing N N 233
MAN C6 O6 sing N N 234
MAN C6 H61 sing N N 235
MAN C6 H62 sing N N 236
MAN O1 HO1 sing N N 237
MAN O2 HO2 sing N N 238
MAN O3 HO3 sing N N 239
MAN O4 HO4 sing N N 240
MAN O6 HO6 sing N N 241
MET N CA sing N N 242
MET N H sing N N 243
MET N H2 sing N N 244
MET CA C sing N N 245
MET CA CB sing N N 246
MET CA HA sing N N 247
MET C O doub N N 248
MET C OXT sing N N 249
MET CB CG sing N N 250
MET CB HB2 sing N N 251
MET CB HB3 sing N N 252
MET CG SD sing N N 253
MET CG HG2 sing N N 254
MET CG HG3 sing N N 255
MET SD CE sing N N 256
MET CE HE1 sing N N 257
MET CE HE2 sing N N 258
MET CE HE3 sing N N 259
MET OXT HXT sing N N 260
PHE N CA sing N N 261
PHE N H sing N N 262
PHE N H2 sing N N 263
PHE CA C sing N N 264
PHE CA CB sing N N 265
PHE CA HA sing N N 266
PHE C O doub N N 267
PHE C OXT sing N N 268
PHE CB CG sing N N 269
PHE CB HB2 sing N N 270
PHE CB HB3 sing N N 271
PHE CG CD1 doub Y N 272
PHE CG CD2 sing Y N 273
PHE CD1 CE1 sing Y N 274
PHE CD1 HD1 sing N N 275
PHE CD2 CE2 doub Y N 276
PHE CD2 HD2 sing N N 277
PHE CE1 CZ doub Y N 278
PHE CE1 HE1 sing N N 279
PHE CE2 CZ sing Y N 280
PHE CE2 HE2 sing N N 281
PHE CZ HZ sing N N 282
PHE OXT HXT sing N N 283
PRO N CA sing N N 284
PRO N CD sing N N 285
PRO N H sing N N 286
PRO CA C sing N N 287
PRO CA CB sing N N 288
PRO CA HA sing N N 289
PRO C O doub N N 290
PRO C OXT sing N N 291
PRO CB CG sing N N 292
PRO CB HB2 sing N N 293
PRO CB HB3 sing N N 294
PRO CG CD sing N N 295
PRO CG HG2 sing N N 296
PRO CG HG3 sing N N 297
PRO CD HD2 sing N N 298
PRO CD HD3 sing N N 299
PRO OXT HXT sing N N 300
SER N CA sing N N 301
SER N H sing N N 302
SER N H2 sing N N 303
SER CA C sing N N 304
SER CA CB sing N N 305
SER CA HA sing N N 306
SER C O doub N N 307
SER C OXT sing N N 308
SER CB OG sing N N 309
SER CB HB2 sing N N 310
SER CB HB3 sing N N 311
SER OG HG sing N N 312
SER OXT HXT sing N N 313
SO4 S O1 doub N N 314
SO4 S O2 doub N N 315
SO4 S O3 sing N N 316
SO4 S O4 sing N N 317
THR N CA sing N N 318
THR N H sing N N 319
THR N H2 sing N N 320
THR CA C sing N N 321
THR CA CB sing N N 322
THR CA HA sing N N 323
THR C O doub N N 324
THR C OXT sing N N 325
THR CB OG1 sing N N 326
THR CB CG2 sing N N 327
THR CB HB sing N N 328
THR OG1 HG1 sing N N 329
THR CG2 HG21 sing N N 330
THR CG2 HG22 sing N N 331
THR CG2 HG23 sing N N 332
THR OXT HXT sing N N 333
TRP N CA sing N N 334
TRP N H sing N N 335
TRP N H2 sing N N 336
TRP CA C sing N N 337
TRP CA CB sing N N 338
TRP CA HA sing N N 339
TRP C O doub N N 340
TRP C OXT sing N N 341
TRP CB CG sing N N 342
TRP CB HB2 sing N N 343
TRP CB HB3 sing N N 344
TRP CG CD1 doub Y N 345
TRP CG CD2 sing Y N 346
TRP CD1 NE1 sing Y N 347
TRP CD1 HD1 sing N N 348
TRP CD2 CE2 doub Y N 349
TRP CD2 CE3 sing Y N 350
TRP NE1 CE2 sing Y N 351
TRP NE1 HE1 sing N N 352
TRP CE2 CZ2 sing Y N 353
TRP CE3 CZ3 doub Y N 354
TRP CE3 HE3 sing N N 355
TRP CZ2 CH2 doub Y N 356
TRP CZ2 HZ2 sing N N 357
TRP CZ3 CH2 sing Y N 358
TRP CZ3 HZ3 sing N N 359
TRP CH2 HH2 sing N N 360
TRP OXT HXT sing N N 361
TYR N CA sing N N 362
TYR N H sing N N 363
TYR N H2 sing N N 364
TYR CA C sing N N 365
TYR CA CB sing N N 366
TYR CA HA sing N N 367
TYR C O doub N N 368
TYR C OXT sing N N 369
TYR CB CG sing N N 370
TYR CB HB2 sing N N 371
TYR CB HB3 sing N N 372
TYR CG CD1 doub Y N 373
TYR CG CD2 sing Y N 374
TYR CD1 CE1 sing Y N 375
TYR CD1 HD1 sing N N 376
TYR CD2 CE2 doub Y N 377
TYR CD2 HD2 sing N N 378
TYR CE1 CZ doub Y N 379
TYR CE1 HE1 sing N N 380
TYR CE2 CZ sing Y N 381
TYR CE2 HE2 sing N N 382
TYR CZ OH sing N N 383
TYR OH HH sing N N 384
TYR OXT HXT sing N N 385
VAL N CA sing N N 386
VAL N H sing N N 387
VAL N H2 sing N N 388
VAL CA C sing N N 389
VAL CA CB sing N N 390
VAL CA HA sing N N 391
VAL C O doub N N 392
VAL C OXT sing N N 393
VAL CB CG1 sing N N 394
VAL CB CG2 sing N N 395
VAL CB HB sing N N 396
VAL CG1 HG11 sing N N 397
VAL CG1 HG12 sing N N 398
VAL CG1 HG13 sing N N 399
VAL CG2 HG21 sing N N 400
VAL CG2 HG22 sing N N 401
VAL CG2 HG23 sing N N 402
VAL OXT HXT sing N N 403
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 MAN 1 n
2 MAN 2 n
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3A0D
_pdbx_initial_refinement_model.details 'PDB ENTRY 3A0D'
#
_atom_sites.entry_id 3A0E
_atom_sites.fract_transf_matrix[1][1] 0.013045
_atom_sites.fract_transf_matrix[1][2] 0.007531
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.015063
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.016286
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_