data_3A4R # _entry.id 3A4R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3A4R pdb_00003a4r 10.2210/pdb3a4r/pdb RCSB RCSB028809 ? ? WWPDB D_1000028809 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3A4R _pdbx_database_status.recvd_initial_deposition_date 2009-07-14 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3A4S _pdbx_database_related.details 'The crystal structure of the SLD2:Ubc9 complex' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sekiyama, N.' 1 'Arita, K.' 2 'Ikeda, Y.' 3 'Ariyoshi, M.' 4 'Tochio, H.' 5 'Saitoh, H.' 6 'Shirakawa, M.' 7 # _citation.id primary _citation.title 'Structural basis for regulation of poly-SUMO chain by a SUMO-like domain of Nip45' _citation.journal_abbrev Proteins _citation.journal_volume 78 _citation.page_first 1491 _citation.page_last 1502 _citation.year 2009 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20077568 _citation.pdbx_database_id_DOI 10.1002/prot.22667 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sekiyama, N.' 1 ? primary 'Arita, K.' 2 ? primary 'Ikeda, Y.' 3 ? primary 'Hashiguchi, K.' 4 ? primary 'Ariyoshi, M.' 5 ? primary 'Tochio, H.' 6 ? primary 'Saitoh, H.' 7 ? primary 'Shirakawa, M.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NFATC2-interacting protein' 8677.913 2 ? ? 'SLD2, Ubiquitin-like domain, residues 339-412' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 275 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Nip45, Nuclear factor of activated T-cells, cytoplasmic 2-interacting protein, 45 kDa NF-AT-interacting protein, 45 kDa NFAT-interacting protein ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPLGSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPADLGLESGDLIEVWG _entity_poly.pdbx_seq_one_letter_code_can GPLGSQELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPADLGLESGDLIEVWG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLN n 1 7 GLU n 1 8 LEU n 1 9 ARG n 1 10 LEU n 1 11 ARG n 1 12 VAL n 1 13 GLN n 1 14 GLY n 1 15 LYS n 1 16 GLU n 1 17 LYS n 1 18 HIS n 1 19 GLN n 1 20 MET n 1 21 LEU n 1 22 GLU n 1 23 ILE n 1 24 SER n 1 25 LEU n 1 26 SER n 1 27 PRO n 1 28 ASP n 1 29 SER n 1 30 PRO n 1 31 LEU n 1 32 LYS n 1 33 VAL n 1 34 LEU n 1 35 MET n 1 36 SER n 1 37 HIS n 1 38 TYR n 1 39 GLU n 1 40 GLU n 1 41 ALA n 1 42 MET n 1 43 GLY n 1 44 LEU n 1 45 SER n 1 46 GLY n 1 47 HIS n 1 48 LYS n 1 49 LEU n 1 50 SER n 1 51 PHE n 1 52 PHE n 1 53 PHE n 1 54 ASP n 1 55 GLY n 1 56 THR n 1 57 LYS n 1 58 LEU n 1 59 SER n 1 60 GLY n 1 61 LYS n 1 62 GLU n 1 63 LEU n 1 64 PRO n 1 65 ALA n 1 66 ASP n 1 67 LEU n 1 68 GLY n 1 69 LEU n 1 70 GLU n 1 71 SER n 1 72 GLY n 1 73 ASP n 1 74 LEU n 1 75 ILE n 1 76 GLU n 1 77 VAL n 1 78 TRP n 1 79 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Nip45 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX6P _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 -4 GLY GLY A . n A 1 2 PRO 2 -3 -3 PRO PRO A . n A 1 3 LEU 3 -2 -2 LEU LEU A . n A 1 4 GLY 4 -1 -1 GLY GLY A . n A 1 5 SER 5 0 0 SER SER A . n A 1 6 GLN 6 339 339 GLN GLN A . n A 1 7 GLU 7 340 340 GLU GLU A . n A 1 8 LEU 8 341 341 LEU LEU A . n A 1 9 ARG 9 342 342 ARG ARG A . n A 1 10 LEU 10 343 343 LEU LEU A . n A 1 11 ARG 11 344 344 ARG ARG A . n A 1 12 VAL 12 345 345 VAL VAL A . n A 1 13 GLN 13 346 346 GLN GLN A . n A 1 14 GLY 14 347 347 GLY GLY A . n A 1 15 LYS 15 348 348 LYS LYS A . n A 1 16 GLU 16 349 349 GLU GLU A . n A 1 17 LYS 17 350 350 LYS LYS A . n A 1 18 HIS 18 351 351 HIS HIS A . n A 1 19 GLN 19 352 352 GLN GLN A . n A 1 20 MET 20 353 353 MET MET A . n A 1 21 LEU 21 354 354 LEU LEU A . n A 1 22 GLU 22 355 355 GLU GLU A . n A 1 23 ILE 23 356 356 ILE ILE A . n A 1 24 SER 24 357 357 SER SER A . n A 1 25 LEU 25 358 358 LEU LEU A . n A 1 26 SER 26 359 359 SER SER A . n A 1 27 PRO 27 360 360 PRO PRO A . n A 1 28 ASP 28 361 361 ASP ASP A . n A 1 29 SER 29 362 362 SER SER A . n A 1 30 PRO 30 363 363 PRO PRO A . n A 1 31 LEU 31 364 364 LEU LEU A . n A 1 32 LYS 32 365 365 LYS LYS A . n A 1 33 VAL 33 366 366 VAL VAL A . n A 1 34 LEU 34 367 367 LEU LEU A . n A 1 35 MET 35 368 368 MET MET A . n A 1 36 SER 36 369 369 SER SER A . n A 1 37 HIS 37 370 370 HIS HIS A . n A 1 38 TYR 38 371 371 TYR TYR A . n A 1 39 GLU 39 372 372 GLU GLU A . n A 1 40 GLU 40 373 373 GLU GLU A . n A 1 41 ALA 41 374 374 ALA ALA A . n A 1 42 MET 42 375 375 MET MET A . n A 1 43 GLY 43 376 376 GLY GLY A . n A 1 44 LEU 44 377 377 LEU LEU A . n A 1 45 SER 45 378 378 SER SER A . n A 1 46 GLY 46 379 379 GLY GLY A . n A 1 47 HIS 47 380 380 HIS HIS A . n A 1 48 LYS 48 381 381 LYS LYS A . n A 1 49 LEU 49 382 382 LEU LEU A . n A 1 50 SER 50 383 383 SER SER A . n A 1 51 PHE 51 384 384 PHE PHE A . n A 1 52 PHE 52 385 385 PHE PHE A . n A 1 53 PHE 53 386 386 PHE PHE A . n A 1 54 ASP 54 387 387 ASP ASP A . n A 1 55 GLY 55 388 388 GLY GLY A . n A 1 56 THR 56 389 389 THR THR A . n A 1 57 LYS 57 390 390 LYS LYS A . n A 1 58 LEU 58 391 391 LEU LEU A . n A 1 59 SER 59 392 392 SER SER A . n A 1 60 GLY 60 393 393 GLY GLY A . n A 1 61 LYS 61 394 394 LYS LYS A . n A 1 62 GLU 62 395 395 GLU GLU A . n A 1 63 LEU 63 396 396 LEU LEU A . n A 1 64 PRO 64 397 397 PRO PRO A . n A 1 65 ALA 65 398 398 ALA ALA A . n A 1 66 ASP 66 399 399 ASP ASP A . n A 1 67 LEU 67 400 400 LEU LEU A . n A 1 68 GLY 68 401 401 GLY GLY A . n A 1 69 LEU 69 402 402 LEU LEU A . n A 1 70 GLU 70 403 403 GLU GLU A . n A 1 71 SER 71 404 404 SER SER A . n A 1 72 GLY 72 405 405 GLY GLY A . n A 1 73 ASP 73 406 406 ASP ASP A . n A 1 74 LEU 74 407 407 LEU LEU A . n A 1 75 ILE 75 408 408 ILE ILE A . n A 1 76 GLU 76 409 409 GLU GLU A . n A 1 77 VAL 77 410 410 VAL VAL A . n A 1 78 TRP 78 411 411 TRP TRP A . n A 1 79 GLY 79 412 412 GLY GLY A . n B 1 1 GLY 1 -4 -4 GLY GLY B . n B 1 2 PRO 2 -3 -3 PRO PRO B . n B 1 3 LEU 3 -2 -2 LEU LEU B . n B 1 4 GLY 4 -1 ? ? ? B . n B 1 5 SER 5 0 ? ? ? B . n B 1 6 GLN 6 339 ? ? ? B . n B 1 7 GLU 7 340 ? ? ? B . n B 1 8 LEU 8 341 341 LEU LEU B . n B 1 9 ARG 9 342 342 ARG ARG B . n B 1 10 LEU 10 343 343 LEU LEU B . n B 1 11 ARG 11 344 344 ARG ARG B . n B 1 12 VAL 12 345 345 VAL VAL B . n B 1 13 GLN 13 346 346 GLN GLN B . n B 1 14 GLY 14 347 347 GLY GLY B . n B 1 15 LYS 15 348 348 LYS LYS B . n B 1 16 GLU 16 349 349 GLU GLU B . n B 1 17 LYS 17 350 350 LYS LYS B . n B 1 18 HIS 18 351 351 HIS HIS B . n B 1 19 GLN 19 352 352 GLN GLN B . n B 1 20 MET 20 353 353 MET MET B . n B 1 21 LEU 21 354 354 LEU LEU B . n B 1 22 GLU 22 355 355 GLU GLU B . n B 1 23 ILE 23 356 356 ILE ILE B . n B 1 24 SER 24 357 357 SER SER B . n B 1 25 LEU 25 358 358 LEU LEU B . n B 1 26 SER 26 359 359 SER SER B . n B 1 27 PRO 27 360 360 PRO PRO B . n B 1 28 ASP 28 361 361 ASP ASP B . n B 1 29 SER 29 362 362 SER SER B . n B 1 30 PRO 30 363 363 PRO PRO B . n B 1 31 LEU 31 364 364 LEU LEU B . n B 1 32 LYS 32 365 365 LYS LYS B . n B 1 33 VAL 33 366 366 VAL VAL B . n B 1 34 LEU 34 367 367 LEU LEU B . n B 1 35 MET 35 368 368 MET MET B . n B 1 36 SER 36 369 369 SER SER B . n B 1 37 HIS 37 370 370 HIS HIS B . n B 1 38 TYR 38 371 371 TYR TYR B . n B 1 39 GLU 39 372 372 GLU GLU B . n B 1 40 GLU 40 373 373 GLU GLU B . n B 1 41 ALA 41 374 374 ALA ALA B . n B 1 42 MET 42 375 375 MET MET B . n B 1 43 GLY 43 376 376 GLY GLY B . n B 1 44 LEU 44 377 377 LEU LEU B . n B 1 45 SER 45 378 378 SER SER B . n B 1 46 GLY 46 379 379 GLY GLY B . n B 1 47 HIS 47 380 380 HIS HIS B . n B 1 48 LYS 48 381 381 LYS LYS B . n B 1 49 LEU 49 382 382 LEU LEU B . n B 1 50 SER 50 383 383 SER SER B . n B 1 51 PHE 51 384 384 PHE PHE B . n B 1 52 PHE 52 385 385 PHE PHE B . n B 1 53 PHE 53 386 386 PHE PHE B . n B 1 54 ASP 54 387 387 ASP ASP B . n B 1 55 GLY 55 388 388 GLY GLY B . n B 1 56 THR 56 389 389 THR THR B . n B 1 57 LYS 57 390 390 LYS LYS B . n B 1 58 LEU 58 391 391 LEU LEU B . n B 1 59 SER 59 392 392 SER SER B . n B 1 60 GLY 60 393 393 GLY GLY B . n B 1 61 LYS 61 394 394 LYS LYS B . n B 1 62 GLU 62 395 395 GLU GLU B . n B 1 63 LEU 63 396 396 LEU LEU B . n B 1 64 PRO 64 397 397 PRO PRO B . n B 1 65 ALA 65 398 398 ALA ALA B . n B 1 66 ASP 66 399 399 ASP ASP B . n B 1 67 LEU 67 400 400 LEU LEU B . n B 1 68 GLY 68 401 401 GLY GLY B . n B 1 69 LEU 69 402 402 LEU LEU B . n B 1 70 GLU 70 403 403 GLU GLU B . n B 1 71 SER 71 404 404 SER SER B . n B 1 72 GLY 72 405 405 GLY GLY B . n B 1 73 ASP 73 406 406 ASP ASP B . n B 1 74 LEU 74 407 407 LEU LEU B . n B 1 75 ILE 75 408 408 ILE ILE B . n B 1 76 GLU 76 409 409 GLU GLU B . n B 1 77 VAL 77 410 410 VAL VAL B . n B 1 78 TRP 78 411 411 TRP TRP B . n B 1 79 GLY 79 412 412 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 3 3 EDO EDO A . D 3 SO4 1 1 1 SO4 SO4 B . E 2 EDO 1 2 2 EDO EDO B . F 4 HOH 1 1 1 HOH HOH A . F 4 HOH 2 2 2 HOH HOH A . F 4 HOH 3 4 4 HOH HOH A . F 4 HOH 4 6 6 HOH HOH A . F 4 HOH 5 8 8 HOH HOH A . F 4 HOH 6 11 11 HOH HOH A . F 4 HOH 7 13 13 HOH HOH A . F 4 HOH 8 15 15 HOH HOH A . F 4 HOH 9 16 16 HOH HOH A . F 4 HOH 10 17 17 HOH HOH A . F 4 HOH 11 23 23 HOH HOH A . F 4 HOH 12 24 24 HOH HOH A . F 4 HOH 13 25 25 HOH HOH A . F 4 HOH 14 26 26 HOH HOH A . F 4 HOH 15 27 27 HOH HOH A . F 4 HOH 16 31 31 HOH HOH A . F 4 HOH 17 33 33 HOH HOH A . F 4 HOH 18 39 39 HOH HOH A . F 4 HOH 19 41 41 HOH HOH A . F 4 HOH 20 42 42 HOH HOH A . F 4 HOH 21 45 45 HOH HOH A . F 4 HOH 22 46 46 HOH HOH A . F 4 HOH 23 47 47 HOH HOH A . F 4 HOH 24 49 49 HOH HOH A . F 4 HOH 25 57 57 HOH HOH A . F 4 HOH 26 58 58 HOH HOH A . F 4 HOH 27 59 59 HOH HOH A . F 4 HOH 28 61 61 HOH HOH A . F 4 HOH 29 64 64 HOH HOH A . F 4 HOH 30 65 65 HOH HOH A . F 4 HOH 31 66 66 HOH HOH A . F 4 HOH 32 68 68 HOH HOH A . F 4 HOH 33 72 72 HOH HOH A . F 4 HOH 34 74 74 HOH HOH A . F 4 HOH 35 75 75 HOH HOH A . F 4 HOH 36 78 78 HOH HOH A . F 4 HOH 37 82 82 HOH HOH A . F 4 HOH 38 87 87 HOH HOH A . F 4 HOH 39 88 88 HOH HOH A . F 4 HOH 40 89 89 HOH HOH A . F 4 HOH 41 92 92 HOH HOH A . F 4 HOH 42 94 94 HOH HOH A . F 4 HOH 43 96 96 HOH HOH A . F 4 HOH 44 98 98 HOH HOH A . F 4 HOH 45 99 99 HOH HOH A . F 4 HOH 46 103 103 HOH HOH A . F 4 HOH 47 104 104 HOH HOH A . F 4 HOH 48 107 107 HOH HOH A . F 4 HOH 49 108 108 HOH HOH A . F 4 HOH 50 110 110 HOH HOH A . F 4 HOH 51 112 112 HOH HOH A . F 4 HOH 52 117 117 HOH HOH A . F 4 HOH 53 121 121 HOH HOH A . F 4 HOH 54 123 123 HOH HOH A . F 4 HOH 55 125 125 HOH HOH A . F 4 HOH 56 127 127 HOH HOH A . F 4 HOH 57 128 128 HOH HOH A . F 4 HOH 58 134 134 HOH HOH A . F 4 HOH 59 135 135 HOH HOH A . F 4 HOH 60 136 136 HOH HOH A . F 4 HOH 61 139 139 HOH HOH A . F 4 HOH 62 141 141 HOH HOH A . F 4 HOH 63 144 144 HOH HOH A . F 4 HOH 64 145 145 HOH HOH A . F 4 HOH 65 149 149 HOH HOH A . F 4 HOH 66 150 150 HOH HOH A . F 4 HOH 67 151 151 HOH HOH A . F 4 HOH 68 152 152 HOH HOH A . F 4 HOH 69 153 153 HOH HOH A . F 4 HOH 70 155 155 HOH HOH A . F 4 HOH 71 156 156 HOH HOH A . F 4 HOH 72 157 157 HOH HOH A . F 4 HOH 73 161 161 HOH HOH A . F 4 HOH 74 163 163 HOH HOH A . F 4 HOH 75 166 166 HOH HOH A . F 4 HOH 76 167 167 HOH HOH A . F 4 HOH 77 168 168 HOH HOH A . F 4 HOH 78 173 173 HOH HOH A . F 4 HOH 79 179 179 HOH HOH A . F 4 HOH 80 180 180 HOH HOH A . F 4 HOH 81 181 181 HOH HOH A . F 4 HOH 82 183 183 HOH HOH A . F 4 HOH 83 187 187 HOH HOH A . F 4 HOH 84 188 188 HOH HOH A . F 4 HOH 85 190 190 HOH HOH A . F 4 HOH 86 191 191 HOH HOH A . F 4 HOH 87 199 199 HOH HOH A . F 4 HOH 88 201 201 HOH HOH A . F 4 HOH 89 202 202 HOH HOH A . F 4 HOH 90 204 204 HOH HOH A . F 4 HOH 91 206 206 HOH HOH A . F 4 HOH 92 208 208 HOH HOH A . F 4 HOH 93 211 211 HOH HOH A . F 4 HOH 94 213 213 HOH HOH A . F 4 HOH 95 214 214 HOH HOH A . F 4 HOH 96 216 216 HOH HOH A . F 4 HOH 97 225 225 HOH HOH A . F 4 HOH 98 226 226 HOH HOH A . F 4 HOH 99 228 228 HOH HOH A . F 4 HOH 100 231 231 HOH HOH A . F 4 HOH 101 232 232 HOH HOH A . F 4 HOH 102 234 234 HOH HOH A . F 4 HOH 103 235 235 HOH HOH A . F 4 HOH 104 237 237 HOH HOH A . F 4 HOH 105 242 242 HOH HOH A . F 4 HOH 106 254 254 HOH HOH A . F 4 HOH 107 259 259 HOH HOH A . F 4 HOH 108 260 260 HOH HOH A . F 4 HOH 109 263 263 HOH HOH A . F 4 HOH 110 264 264 HOH HOH A . F 4 HOH 111 268 268 HOH HOH A . F 4 HOH 112 269 269 HOH HOH A . F 4 HOH 113 271 271 HOH HOH A . F 4 HOH 114 272 272 HOH HOH A . F 4 HOH 115 273 273 HOH HOH A . F 4 HOH 116 277 277 HOH HOH A . F 4 HOH 117 278 278 HOH HOH A . F 4 HOH 118 279 279 HOH HOH A . F 4 HOH 119 284 284 HOH HOH A . F 4 HOH 120 285 285 HOH HOH A . F 4 HOH 121 289 289 HOH HOH A . G 4 HOH 1 3 3 HOH HOH B . G 4 HOH 2 5 5 HOH HOH B . G 4 HOH 3 7 7 HOH HOH B . G 4 HOH 4 9 9 HOH HOH B . G 4 HOH 5 10 10 HOH HOH B . G 4 HOH 6 12 12 HOH HOH B . G 4 HOH 7 14 14 HOH HOH B . G 4 HOH 8 18 18 HOH HOH B . G 4 HOH 9 19 19 HOH HOH B . G 4 HOH 10 20 20 HOH HOH B . G 4 HOH 11 21 21 HOH HOH B . G 4 HOH 12 22 22 HOH HOH B . G 4 HOH 13 28 28 HOH HOH B . G 4 HOH 14 29 29 HOH HOH B . G 4 HOH 15 30 30 HOH HOH B . G 4 HOH 16 32 32 HOH HOH B . G 4 HOH 17 34 34 HOH HOH B . G 4 HOH 18 35 35 HOH HOH B . G 4 HOH 19 36 36 HOH HOH B . G 4 HOH 20 37 37 HOH HOH B . G 4 HOH 21 38 38 HOH HOH B . G 4 HOH 22 40 40 HOH HOH B . G 4 HOH 23 43 43 HOH HOH B . G 4 HOH 24 44 44 HOH HOH B . G 4 HOH 25 48 48 HOH HOH B . G 4 HOH 26 50 50 HOH HOH B . G 4 HOH 27 51 51 HOH HOH B . G 4 HOH 28 52 52 HOH HOH B . G 4 HOH 29 53 53 HOH HOH B . G 4 HOH 30 54 54 HOH HOH B . G 4 HOH 31 55 55 HOH HOH B . G 4 HOH 32 56 56 HOH HOH B . G 4 HOH 33 60 60 HOH HOH B . G 4 HOH 34 62 62 HOH HOH B . G 4 HOH 35 63 63 HOH HOH B . G 4 HOH 36 67 67 HOH HOH B . G 4 HOH 37 69 69 HOH HOH B . G 4 HOH 38 70 70 HOH HOH B . G 4 HOH 39 71 71 HOH HOH B . G 4 HOH 40 73 73 HOH HOH B . G 4 HOH 41 76 76 HOH HOH B . G 4 HOH 42 77 77 HOH HOH B . G 4 HOH 43 79 79 HOH HOH B . G 4 HOH 44 80 80 HOH HOH B . G 4 HOH 45 81 81 HOH HOH B . G 4 HOH 46 83 83 HOH HOH B . G 4 HOH 47 84 84 HOH HOH B . G 4 HOH 48 85 85 HOH HOH B . G 4 HOH 49 86 86 HOH HOH B . G 4 HOH 50 90 90 HOH HOH B . G 4 HOH 51 91 91 HOH HOH B . G 4 HOH 52 93 93 HOH HOH B . G 4 HOH 53 95 95 HOH HOH B . G 4 HOH 54 97 97 HOH HOH B . G 4 HOH 55 101 101 HOH HOH B . G 4 HOH 56 102 102 HOH HOH B . G 4 HOH 57 105 105 HOH HOH B . G 4 HOH 58 106 106 HOH HOH B . G 4 HOH 59 109 109 HOH HOH B . G 4 HOH 60 111 111 HOH HOH B . G 4 HOH 61 113 113 HOH HOH B . G 4 HOH 62 114 114 HOH HOH B . G 4 HOH 63 115 115 HOH HOH B . G 4 HOH 64 116 116 HOH HOH B . G 4 HOH 65 118 118 HOH HOH B . G 4 HOH 66 119 119 HOH HOH B . G 4 HOH 67 120 120 HOH HOH B . G 4 HOH 68 122 122 HOH HOH B . G 4 HOH 69 124 124 HOH HOH B . G 4 HOH 70 126 126 HOH HOH B . G 4 HOH 71 129 129 HOH HOH B . G 4 HOH 72 130 130 HOH HOH B . G 4 HOH 73 131 131 HOH HOH B . G 4 HOH 74 132 132 HOH HOH B . G 4 HOH 75 133 133 HOH HOH B . G 4 HOH 76 137 137 HOH HOH B . G 4 HOH 77 138 138 HOH HOH B . G 4 HOH 78 140 140 HOH HOH B . G 4 HOH 79 142 142 HOH HOH B . G 4 HOH 80 143 143 HOH HOH B . G 4 HOH 81 146 146 HOH HOH B . G 4 HOH 82 147 147 HOH HOH B . G 4 HOH 83 148 148 HOH HOH B . G 4 HOH 84 154 154 HOH HOH B . G 4 HOH 85 158 158 HOH HOH B . G 4 HOH 86 159 159 HOH HOH B . G 4 HOH 87 160 160 HOH HOH B . G 4 HOH 88 162 162 HOH HOH B . G 4 HOH 89 164 164 HOH HOH B . G 4 HOH 90 165 165 HOH HOH B . G 4 HOH 91 169 169 HOH HOH B . G 4 HOH 92 170 170 HOH HOH B . G 4 HOH 93 171 171 HOH HOH B . G 4 HOH 94 172 172 HOH HOH B . G 4 HOH 95 174 174 HOH HOH B . G 4 HOH 96 175 175 HOH HOH B . G 4 HOH 97 176 176 HOH HOH B . G 4 HOH 98 177 177 HOH HOH B . G 4 HOH 99 178 178 HOH HOH B . G 4 HOH 100 182 182 HOH HOH B . G 4 HOH 101 184 184 HOH HOH B . G 4 HOH 102 185 185 HOH HOH B . G 4 HOH 103 186 186 HOH HOH B . G 4 HOH 104 189 189 HOH HOH B . G 4 HOH 105 192 192 HOH HOH B . G 4 HOH 106 193 193 HOH HOH B . G 4 HOH 107 194 194 HOH HOH B . G 4 HOH 108 195 195 HOH HOH B . G 4 HOH 109 196 196 HOH HOH B . G 4 HOH 110 200 200 HOH HOH B . G 4 HOH 111 203 203 HOH HOH B . G 4 HOH 112 205 205 HOH HOH B . G 4 HOH 113 209 209 HOH HOH B . G 4 HOH 114 210 210 HOH HOH B . G 4 HOH 115 212 212 HOH HOH B . G 4 HOH 116 215 215 HOH HOH B . G 4 HOH 117 217 217 HOH HOH B . G 4 HOH 118 218 218 HOH HOH B . G 4 HOH 119 219 219 HOH HOH B . G 4 HOH 120 220 220 HOH HOH B . G 4 HOH 121 221 221 HOH HOH B . G 4 HOH 122 222 222 HOH HOH B . G 4 HOH 123 223 223 HOH HOH B . G 4 HOH 124 224 224 HOH HOH B . G 4 HOH 125 230 230 HOH HOH B . G 4 HOH 126 233 233 HOH HOH B . G 4 HOH 127 236 236 HOH HOH B . G 4 HOH 128 238 238 HOH HOH B . G 4 HOH 129 239 239 HOH HOH B . G 4 HOH 130 240 240 HOH HOH B . G 4 HOH 131 241 241 HOH HOH B . G 4 HOH 132 243 243 HOH HOH B . G 4 HOH 133 244 244 HOH HOH B . G 4 HOH 134 245 245 HOH HOH B . G 4 HOH 135 246 246 HOH HOH B . G 4 HOH 136 248 248 HOH HOH B . G 4 HOH 137 250 250 HOH HOH B . G 4 HOH 138 251 251 HOH HOH B . G 4 HOH 139 252 252 HOH HOH B . G 4 HOH 140 253 253 HOH HOH B . G 4 HOH 141 255 255 HOH HOH B . G 4 HOH 142 256 256 HOH HOH B . G 4 HOH 143 257 257 HOH HOH B . G 4 HOH 144 258 258 HOH HOH B . G 4 HOH 145 265 265 HOH HOH B . G 4 HOH 146 266 266 HOH HOH B . G 4 HOH 147 270 270 HOH HOH B . G 4 HOH 148 274 274 HOH HOH B . G 4 HOH 149 275 275 HOH HOH B . G 4 HOH 150 276 276 HOH HOH B . G 4 HOH 151 281 281 HOH HOH B . G 4 HOH 152 282 282 HOH HOH B . G 4 HOH 153 283 283 HOH HOH B . G 4 HOH 154 286 286 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHENIX refinement '(phenix.refine)' ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # _cell.entry_id 3A4R _cell.length_a 26.953 _cell.length_b 35.373 _cell.length_c 68.943 _cell.angle_alpha 90.00 _cell.angle_beta 97.18 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3A4R _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3A4R _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_percent_sol 34.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '3.5M ammonium sulfate, 0.1M TrisHCl, 1% 2-methyl-2,4-pentanediol (MPD), pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 210' 2008-11-12 ? 2 CCD 'ADSC QUANTUM 210' 2008-11-12 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? MAD x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.00000 1.0 2 0.97919 1.0 3 0.97931 1.0 4 0.96408 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'PHOTON FACTORY BEAMLINE AR-NW12A' 'Photon Factory' AR-NW12A ? 1.00000 2 SYNCHROTRON 'PHOTON FACTORY BEAMLINE AR-NW12A' 'Photon Factory' AR-NW12A ? '0.97919, 0.97931, 0.96408' # _reflns.entry_id 3A4R _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.00 _reflns.number_obs 62499 _reflns.number_all ? _reflns.percent_possible_obs 89.7 _reflns.pdbx_Rmerge_I_obs 0.039 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 7.700 _reflns.pdbx_redundancy 3.5 _reflns.pdbx_netI_over_sigmaI 17.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.00 _reflns_shell.d_res_low 1.04 _reflns_shell.percent_possible_all 81.1 _reflns_shell.Rmerge_I_obs 0.413 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3A4R _refine.ls_number_reflns_obs 61881 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.811 _refine.ls_d_res_high 1.000 _refine.ls_percent_reflns_obs 88.65 _refine.ls_R_factor_obs 0.1593 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1580 _refine.ls_R_factor_R_free 0.1836 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.06 _refine.ls_number_reflns_R_free 3132 _refine.ls_number_reflns_R_work 58749 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_max 1.00 _refine.occupancy_min 0.17 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 10.863 _refine.aniso_B[1][1] 0.140 _refine.aniso_B[2][2] -0.458 _refine.aniso_B[3][3] 0.317 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.297 _refine.aniso_B[2][3] -0.000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.403 _refine.solvent_model_param_bsol 65.575 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.06 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_max 54.23 _refine.B_iso_min 0.22 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.898 _refine.pdbx_overall_phase_error 16.940 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2423 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 275 _refine_hist.number_atoms_total 2711 _refine_hist.d_res_high 1.000 _refine_hist.d_res_low 19.811 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 2464 'X-RAY DIFFRACTION' ? f_angle_d 1.110 ? ? 4448 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.313 ? ? 628 'X-RAY DIFFRACTION' ? f_chiral_restr 0.090 ? ? 183 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 374 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 0.9996 1.0152 2225 0.2319 74.00 0.2733 . . 110 . . . . 'X-RAY DIFFRACTION' . 1.0152 1.0319 2529 0.1880 84.00 0.2183 . . 114 . . . . 'X-RAY DIFFRACTION' . 1.0319 1.0496 2534 0.1659 85.00 0.2132 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.0496 1.0687 2549 0.1476 85.00 0.1859 . . 136 . . . . 'X-RAY DIFFRACTION' . 1.0687 1.0893 2614 0.1344 86.00 0.1658 . . 147 . . . . 'X-RAY DIFFRACTION' . 1.0893 1.1115 2566 0.1303 86.00 0.1510 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.1115 1.1357 2599 0.1264 87.00 0.1862 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.1357 1.1621 2624 0.1232 87.00 0.1655 . . 137 . . . . 'X-RAY DIFFRACTION' . 1.1621 1.1912 2629 0.1199 88.00 0.1563 . . 149 . . . . 'X-RAY DIFFRACTION' . 1.1912 1.2234 2627 0.1225 87.00 0.1397 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.2234 1.2594 2665 0.1202 89.00 0.1455 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.2594 1.3000 2669 0.1186 89.00 0.1546 . . 162 . . . . 'X-RAY DIFFRACTION' . 1.3000 1.3464 2723 0.1172 90.00 0.1574 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.3464 1.4003 2706 0.1228 90.00 0.1522 . . 137 . . . . 'X-RAY DIFFRACTION' . 1.4003 1.4641 2753 0.1217 92.00 0.1594 . . 148 . . . . 'X-RAY DIFFRACTION' . 1.4641 1.5412 2771 0.1257 92.00 0.1624 . . 164 . . . . 'X-RAY DIFFRACTION' . 1.5412 1.6377 2837 0.1229 94.00 0.1612 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.6377 1.7641 2891 0.1274 95.00 0.1604 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.7641 1.9415 2887 0.1275 95.00 0.1570 . . 163 . . . . 'X-RAY DIFFRACTION' . 1.9415 2.2221 2898 0.1289 95.00 0.1494 . . 157 . . . . 'X-RAY DIFFRACTION' . 2.2221 2.7984 2890 0.1471 96.00 0.1598 . . 163 . . . . 'X-RAY DIFFRACTION' . 2.7984 19.8144 2563 0.2132 82.00 0.2355 . . 149 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3A4R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3A4R _struct.title 'The crystal structure of SUMO-like domain 2 in Nip45' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3A4R _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'ubiquitin fold, Coiled coil, Cytoplasm, Methylation, Nucleus, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NF2IP_MOUSE _struct_ref.pdbx_db_accession O09130 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFFDGTKLSGKELPADLGLESGDLIEVWG _struct_ref.pdbx_align_begin 339 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3A4R A 6 ? 79 ? O09130 339 ? 412 ? 339 412 2 1 3A4R B 6 ? 79 ? O09130 339 ? 412 ? 339 412 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3A4R GLY A 1 ? UNP O09130 ? ? 'expression tag' -4 1 1 3A4R PRO A 2 ? UNP O09130 ? ? 'expression tag' -3 2 1 3A4R LEU A 3 ? UNP O09130 ? ? 'expression tag' -2 3 1 3A4R GLY A 4 ? UNP O09130 ? ? 'expression tag' -1 4 1 3A4R SER A 5 ? UNP O09130 ? ? 'expression tag' 0 5 2 3A4R GLY B 1 ? UNP O09130 ? ? 'expression tag' -4 6 2 3A4R PRO B 2 ? UNP O09130 ? ? 'expression tag' -3 7 2 3A4R LEU B 3 ? UNP O09130 ? ? 'expression tag' -2 8 2 3A4R GLY B 4 ? UNP O09130 ? ? 'expression tag' -1 9 2 3A4R SER B 5 ? UNP O09130 ? ? 'expression tag' 0 10 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 30 ? GLY A 43 ? PRO A 363 GLY A 376 1 ? 14 HELX_P HELX_P2 2 LEU A 63 ? GLY A 68 ? LEU A 396 GLY A 401 1 ? 6 HELX_P HELX_P3 3 PRO B 30 ? GLY B 43 ? PRO B 363 GLY B 376 1 ? 14 HELX_P HELX_P4 4 LEU B 63 ? LEU B 67 ? LEU B 396 LEU B 400 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 20 ? LEU A 25 ? MET A 353 LEU A 358 A 2 LEU A 8 ? GLN A 13 ? LEU A 341 GLN A 346 A 3 LEU A 74 ? TRP A 78 ? LEU A 407 TRP A 411 A 4 SER A 50 ? PHE A 53 ? SER A 383 PHE A 386 A 5 THR A 56 ? LYS A 57 ? THR A 389 LYS A 390 B 1 MET B 20 ? SER B 24 ? MET B 353 SER B 357 B 2 ARG B 9 ? GLN B 13 ? ARG B 342 GLN B 346 B 3 LEU B 74 ? TRP B 78 ? LEU B 407 TRP B 411 B 4 SER B 50 ? PHE B 53 ? SER B 383 PHE B 386 B 5 THR B 56 ? LYS B 57 ? THR B 389 LYS B 390 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 23 ? O ILE A 356 N LEU A 10 ? N LEU A 343 A 2 3 N GLN A 13 ? N GLN A 346 O VAL A 77 ? O VAL A 410 A 3 4 O TRP A 78 ? O TRP A 411 N SER A 50 ? N SER A 383 A 4 5 N PHE A 53 ? N PHE A 386 O THR A 56 ? O THR A 389 B 1 2 O ILE B 23 ? O ILE B 356 N LEU B 10 ? N LEU B 343 B 2 3 N GLN B 13 ? N GLN B 346 O VAL B 77 ? O VAL B 410 B 3 4 O TRP B 78 ? O TRP B 411 N SER B 50 ? N SER B 383 B 4 5 N PHE B 53 ? N PHE B 386 O THR B 56 ? O THR B 389 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 3 ? 2 'BINDING SITE FOR RESIDUE EDO A 3' AC2 Software B SO4 1 ? 2 'BINDING SITE FOR RESIDUE SO4 B 1' AC3 Software B EDO 2 ? 3 'BINDING SITE FOR RESIDUE EDO B 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HIS A 37 ? HIS A 370 . ? 1_555 ? 2 AC1 2 ASP A 54 ? ASP A 387 . ? 1_655 ? 3 AC2 2 HOH G . ? HOH B 77 . ? 1_555 ? 4 AC2 2 LYS B 17 ? LYS B 350 . ? 1_555 ? 5 AC3 3 HOH G . ? HOH B 20 . ? 1_455 ? 6 AC3 3 HIS B 37 ? HIS B 370 . ? 1_555 ? 7 AC3 3 ASP B 54 ? ASP B 387 . ? 1_455 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 359 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 OD2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 361 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 0 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -146.13 _pdbx_validate_torsion.psi 15.31 # _pdbx_entry_details.entry_id 3A4R _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'THIS COORDINATES IN ALL CHAINS USE NON-SEQUENTIAL RESIDUE NUMBERING TO CLARIFY THE EXPRESSION TAGS.' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY -1 ? B GLY 4 2 1 Y 1 B SER 0 ? B SER 5 3 1 Y 1 B GLN 339 ? B GLN 6 4 1 Y 1 B GLU 340 ? B GLU 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 EDO C1 C N N 57 EDO O1 O N N 58 EDO C2 C N N 59 EDO O2 O N N 60 EDO H11 H N N 61 EDO H12 H N N 62 EDO HO1 H N N 63 EDO H21 H N N 64 EDO H22 H N N 65 EDO HO2 H N N 66 GLN N N N N 67 GLN CA C N S 68 GLN C C N N 69 GLN O O N N 70 GLN CB C N N 71 GLN CG C N N 72 GLN CD C N N 73 GLN OE1 O N N 74 GLN NE2 N N N 75 GLN OXT O N N 76 GLN H H N N 77 GLN H2 H N N 78 GLN HA H N N 79 GLN HB2 H N N 80 GLN HB3 H N N 81 GLN HG2 H N N 82 GLN HG3 H N N 83 GLN HE21 H N N 84 GLN HE22 H N N 85 GLN HXT H N N 86 GLU N N N N 87 GLU CA C N S 88 GLU C C N N 89 GLU O O N N 90 GLU CB C N N 91 GLU CG C N N 92 GLU CD C N N 93 GLU OE1 O N N 94 GLU OE2 O N N 95 GLU OXT O N N 96 GLU H H N N 97 GLU H2 H N N 98 GLU HA H N N 99 GLU HB2 H N N 100 GLU HB3 H N N 101 GLU HG2 H N N 102 GLU HG3 H N N 103 GLU HE2 H N N 104 GLU HXT H N N 105 GLY N N N N 106 GLY CA C N N 107 GLY C C N N 108 GLY O O N N 109 GLY OXT O N N 110 GLY H H N N 111 GLY H2 H N N 112 GLY HA2 H N N 113 GLY HA3 H N N 114 GLY HXT H N N 115 HIS N N N N 116 HIS CA C N S 117 HIS C C N N 118 HIS O O N N 119 HIS CB C N N 120 HIS CG C Y N 121 HIS ND1 N Y N 122 HIS CD2 C Y N 123 HIS CE1 C Y N 124 HIS NE2 N Y N 125 HIS OXT O N N 126 HIS H H N N 127 HIS H2 H N N 128 HIS HA H N N 129 HIS HB2 H N N 130 HIS HB3 H N N 131 HIS HD1 H N N 132 HIS HD2 H N N 133 HIS HE1 H N N 134 HIS HE2 H N N 135 HIS HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 SO4 S S N N 283 SO4 O1 O N N 284 SO4 O2 O N N 285 SO4 O3 O N N 286 SO4 O4 O N N 287 THR N N N N 288 THR CA C N S 289 THR C C N N 290 THR O O N N 291 THR CB C N R 292 THR OG1 O N N 293 THR CG2 C N N 294 THR OXT O N N 295 THR H H N N 296 THR H2 H N N 297 THR HA H N N 298 THR HB H N N 299 THR HG1 H N N 300 THR HG21 H N N 301 THR HG22 H N N 302 THR HG23 H N N 303 THR HXT H N N 304 TRP N N N N 305 TRP CA C N S 306 TRP C C N N 307 TRP O O N N 308 TRP CB C N N 309 TRP CG C Y N 310 TRP CD1 C Y N 311 TRP CD2 C Y N 312 TRP NE1 N Y N 313 TRP CE2 C Y N 314 TRP CE3 C Y N 315 TRP CZ2 C Y N 316 TRP CZ3 C Y N 317 TRP CH2 C Y N 318 TRP OXT O N N 319 TRP H H N N 320 TRP H2 H N N 321 TRP HA H N N 322 TRP HB2 H N N 323 TRP HB3 H N N 324 TRP HD1 H N N 325 TRP HE1 H N N 326 TRP HE3 H N N 327 TRP HZ2 H N N 328 TRP HZ3 H N N 329 TRP HH2 H N N 330 TRP HXT H N N 331 TYR N N N N 332 TYR CA C N S 333 TYR C C N N 334 TYR O O N N 335 TYR CB C N N 336 TYR CG C Y N 337 TYR CD1 C Y N 338 TYR CD2 C Y N 339 TYR CE1 C Y N 340 TYR CE2 C Y N 341 TYR CZ C Y N 342 TYR OH O N N 343 TYR OXT O N N 344 TYR H H N N 345 TYR H2 H N N 346 TYR HA H N N 347 TYR HB2 H N N 348 TYR HB3 H N N 349 TYR HD1 H N N 350 TYR HD2 H N N 351 TYR HE1 H N N 352 TYR HE2 H N N 353 TYR HH H N N 354 TYR HXT H N N 355 VAL N N N N 356 VAL CA C N S 357 VAL C C N N 358 VAL O O N N 359 VAL CB C N N 360 VAL CG1 C N N 361 VAL CG2 C N N 362 VAL OXT O N N 363 VAL H H N N 364 VAL H2 H N N 365 VAL HA H N N 366 VAL HB H N N 367 VAL HG11 H N N 368 VAL HG12 H N N 369 VAL HG13 H N N 370 VAL HG21 H N N 371 VAL HG22 H N N 372 VAL HG23 H N N 373 VAL HXT H N N 374 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 EDO C1 O1 sing N N 54 EDO C1 C2 sing N N 55 EDO C1 H11 sing N N 56 EDO C1 H12 sing N N 57 EDO O1 HO1 sing N N 58 EDO C2 O2 sing N N 59 EDO C2 H21 sing N N 60 EDO C2 H22 sing N N 61 EDO O2 HO2 sing N N 62 GLN N CA sing N N 63 GLN N H sing N N 64 GLN N H2 sing N N 65 GLN CA C sing N N 66 GLN CA CB sing N N 67 GLN CA HA sing N N 68 GLN C O doub N N 69 GLN C OXT sing N N 70 GLN CB CG sing N N 71 GLN CB HB2 sing N N 72 GLN CB HB3 sing N N 73 GLN CG CD sing N N 74 GLN CG HG2 sing N N 75 GLN CG HG3 sing N N 76 GLN CD OE1 doub N N 77 GLN CD NE2 sing N N 78 GLN NE2 HE21 sing N N 79 GLN NE2 HE22 sing N N 80 GLN OXT HXT sing N N 81 GLU N CA sing N N 82 GLU N H sing N N 83 GLU N H2 sing N N 84 GLU CA C sing N N 85 GLU CA CB sing N N 86 GLU CA HA sing N N 87 GLU C O doub N N 88 GLU C OXT sing N N 89 GLU CB CG sing N N 90 GLU CB HB2 sing N N 91 GLU CB HB3 sing N N 92 GLU CG CD sing N N 93 GLU CG HG2 sing N N 94 GLU CG HG3 sing N N 95 GLU CD OE1 doub N N 96 GLU CD OE2 sing N N 97 GLU OE2 HE2 sing N N 98 GLU OXT HXT sing N N 99 GLY N CA sing N N 100 GLY N H sing N N 101 GLY N H2 sing N N 102 GLY CA C sing N N 103 GLY CA HA2 sing N N 104 GLY CA HA3 sing N N 105 GLY C O doub N N 106 GLY C OXT sing N N 107 GLY OXT HXT sing N N 108 HIS N CA sing N N 109 HIS N H sing N N 110 HIS N H2 sing N N 111 HIS CA C sing N N 112 HIS CA CB sing N N 113 HIS CA HA sing N N 114 HIS C O doub N N 115 HIS C OXT sing N N 116 HIS CB CG sing N N 117 HIS CB HB2 sing N N 118 HIS CB HB3 sing N N 119 HIS CG ND1 sing Y N 120 HIS CG CD2 doub Y N 121 HIS ND1 CE1 doub Y N 122 HIS ND1 HD1 sing N N 123 HIS CD2 NE2 sing Y N 124 HIS CD2 HD2 sing N N 125 HIS CE1 NE2 sing Y N 126 HIS CE1 HE1 sing N N 127 HIS NE2 HE2 sing N N 128 HIS OXT HXT sing N N 129 HOH O H1 sing N N 130 HOH O H2 sing N N 131 ILE N CA sing N N 132 ILE N H sing N N 133 ILE N H2 sing N N 134 ILE CA C sing N N 135 ILE CA CB sing N N 136 ILE CA HA sing N N 137 ILE C O doub N N 138 ILE C OXT sing N N 139 ILE CB CG1 sing N N 140 ILE CB CG2 sing N N 141 ILE CB HB sing N N 142 ILE CG1 CD1 sing N N 143 ILE CG1 HG12 sing N N 144 ILE CG1 HG13 sing N N 145 ILE CG2 HG21 sing N N 146 ILE CG2 HG22 sing N N 147 ILE CG2 HG23 sing N N 148 ILE CD1 HD11 sing N N 149 ILE CD1 HD12 sing N N 150 ILE CD1 HD13 sing N N 151 ILE OXT HXT sing N N 152 LEU N CA sing N N 153 LEU N H sing N N 154 LEU N H2 sing N N 155 LEU CA C sing N N 156 LEU CA CB sing N N 157 LEU CA HA sing N N 158 LEU C O doub N N 159 LEU C OXT sing N N 160 LEU CB CG sing N N 161 LEU CB HB2 sing N N 162 LEU CB HB3 sing N N 163 LEU CG CD1 sing N N 164 LEU CG CD2 sing N N 165 LEU CG HG sing N N 166 LEU CD1 HD11 sing N N 167 LEU CD1 HD12 sing N N 168 LEU CD1 HD13 sing N N 169 LEU CD2 HD21 sing N N 170 LEU CD2 HD22 sing N N 171 LEU CD2 HD23 sing N N 172 LEU OXT HXT sing N N 173 LYS N CA sing N N 174 LYS N H sing N N 175 LYS N H2 sing N N 176 LYS CA C sing N N 177 LYS CA CB sing N N 178 LYS CA HA sing N N 179 LYS C O doub N N 180 LYS C OXT sing N N 181 LYS CB CG sing N N 182 LYS CB HB2 sing N N 183 LYS CB HB3 sing N N 184 LYS CG CD sing N N 185 LYS CG HG2 sing N N 186 LYS CG HG3 sing N N 187 LYS CD CE sing N N 188 LYS CD HD2 sing N N 189 LYS CD HD3 sing N N 190 LYS CE NZ sing N N 191 LYS CE HE2 sing N N 192 LYS CE HE3 sing N N 193 LYS NZ HZ1 sing N N 194 LYS NZ HZ2 sing N N 195 LYS NZ HZ3 sing N N 196 LYS OXT HXT sing N N 197 MET N CA sing N N 198 MET N H sing N N 199 MET N H2 sing N N 200 MET CA C sing N N 201 MET CA CB sing N N 202 MET CA HA sing N N 203 MET C O doub N N 204 MET C OXT sing N N 205 MET CB CG sing N N 206 MET CB HB2 sing N N 207 MET CB HB3 sing N N 208 MET CG SD sing N N 209 MET CG HG2 sing N N 210 MET CG HG3 sing N N 211 MET SD CE sing N N 212 MET CE HE1 sing N N 213 MET CE HE2 sing N N 214 MET CE HE3 sing N N 215 MET OXT HXT sing N N 216 PHE N CA sing N N 217 PHE N H sing N N 218 PHE N H2 sing N N 219 PHE CA C sing N N 220 PHE CA CB sing N N 221 PHE CA HA sing N N 222 PHE C O doub N N 223 PHE C OXT sing N N 224 PHE CB CG sing N N 225 PHE CB HB2 sing N N 226 PHE CB HB3 sing N N 227 PHE CG CD1 doub Y N 228 PHE CG CD2 sing Y N 229 PHE CD1 CE1 sing Y N 230 PHE CD1 HD1 sing N N 231 PHE CD2 CE2 doub Y N 232 PHE CD2 HD2 sing N N 233 PHE CE1 CZ doub Y N 234 PHE CE1 HE1 sing N N 235 PHE CE2 CZ sing Y N 236 PHE CE2 HE2 sing N N 237 PHE CZ HZ sing N N 238 PHE OXT HXT sing N N 239 PRO N CA sing N N 240 PRO N CD sing N N 241 PRO N H sing N N 242 PRO CA C sing N N 243 PRO CA CB sing N N 244 PRO CA HA sing N N 245 PRO C O doub N N 246 PRO C OXT sing N N 247 PRO CB CG sing N N 248 PRO CB HB2 sing N N 249 PRO CB HB3 sing N N 250 PRO CG CD sing N N 251 PRO CG HG2 sing N N 252 PRO CG HG3 sing N N 253 PRO CD HD2 sing N N 254 PRO CD HD3 sing N N 255 PRO OXT HXT sing N N 256 SER N CA sing N N 257 SER N H sing N N 258 SER N H2 sing N N 259 SER CA C sing N N 260 SER CA CB sing N N 261 SER CA HA sing N N 262 SER C O doub N N 263 SER C OXT sing N N 264 SER CB OG sing N N 265 SER CB HB2 sing N N 266 SER CB HB3 sing N N 267 SER OG HG sing N N 268 SER OXT HXT sing N N 269 SO4 S O1 doub N N 270 SO4 S O2 doub N N 271 SO4 S O3 sing N N 272 SO4 S O4 sing N N 273 THR N CA sing N N 274 THR N H sing N N 275 THR N H2 sing N N 276 THR CA C sing N N 277 THR CA CB sing N N 278 THR CA HA sing N N 279 THR C O doub N N 280 THR C OXT sing N N 281 THR CB OG1 sing N N 282 THR CB CG2 sing N N 283 THR CB HB sing N N 284 THR OG1 HG1 sing N N 285 THR CG2 HG21 sing N N 286 THR CG2 HG22 sing N N 287 THR CG2 HG23 sing N N 288 THR OXT HXT sing N N 289 TRP N CA sing N N 290 TRP N H sing N N 291 TRP N H2 sing N N 292 TRP CA C sing N N 293 TRP CA CB sing N N 294 TRP CA HA sing N N 295 TRP C O doub N N 296 TRP C OXT sing N N 297 TRP CB CG sing N N 298 TRP CB HB2 sing N N 299 TRP CB HB3 sing N N 300 TRP CG CD1 doub Y N 301 TRP CG CD2 sing Y N 302 TRP CD1 NE1 sing Y N 303 TRP CD1 HD1 sing N N 304 TRP CD2 CE2 doub Y N 305 TRP CD2 CE3 sing Y N 306 TRP NE1 CE2 sing Y N 307 TRP NE1 HE1 sing N N 308 TRP CE2 CZ2 sing Y N 309 TRP CE3 CZ3 doub Y N 310 TRP CE3 HE3 sing N N 311 TRP CZ2 CH2 doub Y N 312 TRP CZ2 HZ2 sing N N 313 TRP CZ3 CH2 sing Y N 314 TRP CZ3 HZ3 sing N N 315 TRP CH2 HH2 sing N N 316 TRP OXT HXT sing N N 317 TYR N CA sing N N 318 TYR N H sing N N 319 TYR N H2 sing N N 320 TYR CA C sing N N 321 TYR CA CB sing N N 322 TYR CA HA sing N N 323 TYR C O doub N N 324 TYR C OXT sing N N 325 TYR CB CG sing N N 326 TYR CB HB2 sing N N 327 TYR CB HB3 sing N N 328 TYR CG CD1 doub Y N 329 TYR CG CD2 sing Y N 330 TYR CD1 CE1 sing Y N 331 TYR CD1 HD1 sing N N 332 TYR CD2 CE2 doub Y N 333 TYR CD2 HD2 sing N N 334 TYR CE1 CZ doub Y N 335 TYR CE1 HE1 sing N N 336 TYR CE2 CZ sing Y N 337 TYR CE2 HE2 sing N N 338 TYR CZ OH sing N N 339 TYR OH HH sing N N 340 TYR OXT HXT sing N N 341 VAL N CA sing N N 342 VAL N H sing N N 343 VAL N H2 sing N N 344 VAL CA C sing N N 345 VAL CA CB sing N N 346 VAL CA HA sing N N 347 VAL C O doub N N 348 VAL C OXT sing N N 349 VAL CB CG1 sing N N 350 VAL CB CG2 sing N N 351 VAL CB HB sing N N 352 VAL CG1 HG11 sing N N 353 VAL CG1 HG12 sing N N 354 VAL CG1 HG13 sing N N 355 VAL CG2 HG21 sing N N 356 VAL CG2 HG22 sing N N 357 VAL CG2 HG23 sing N N 358 VAL OXT HXT sing N N 359 # _atom_sites.entry_id 3A4R _atom_sites.fract_transf_matrix[1][1] 0.037102 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004676 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028270 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014619 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_