HEADER TRANSCRIPTION REGULATOR/DNA 11-AUG-09 3A5T TITLE CRYSTAL STRUCTURE OF MAFG-DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR MAFG; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BINDING DOMAIN, RESIDUES 21-123; COMPND 5 SYNONYM: MAFG TRANSCRIPTION FACTOR, V-MAF MUSCULOAPONEUROTIC COMPND 6 FIBROSARCOMA ONCOGENE HOMOLOG G; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*CP*TP*GP*AP*TP*GP*AP*GP*TP*CP*AP*GP*CP*AP*C)-3'; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*GP*TP*GP*CP*TP*GP*AP*CP*TP*CP*AP*TP*CP*AP*G)-3'; COMPND 14 CHAIN: D; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MAFG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-CODONPLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-DNA COMPLEX, BZIP FACTOR, ACETYLATION, DNA-BINDING, KEYWDS 2 ISOPEPTIDE BOND, NUCLEUS, REPRESSOR, TRANSCRIPTION, TRANSCRIPTION KEYWDS 3 REGULATION, UBL CONJUGATION, TRANSCRIPTION REGULATOR-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.KUROKAWA,H.MOTOHASHI,S.SUENO,M.KIMURA,H.TAKAGAWA,Y.KANNO, AUTHOR 2 M.YAMAMOTO,T.TANAKA REVDAT 3 14-JUN-23 3A5T 1 SOURCE REMARK SEQADV LINK REVDAT 2 17-NOV-09 3A5T 1 JRNL REVDAT 1 13-OCT-09 3A5T 0 JRNL AUTH H.KUROKAWA,H.MOTOHASHI,S.SUENO,M.KIMURA,H.TAKAGAWA,Y.KANNO, JRNL AUTH 2 M.YAMAMOTO,T.TANAKA JRNL TITL STRUCTURAL BASIS OF ALTERNATIVE DNA RECOGNITION BY MAF JRNL TITL 2 TRANSCRIPTION FACTORS JRNL REF MOL.CELL.BIOL. V. 29 6232 2009 JRNL REFN ISSN 0270-7306 JRNL PMID 19797082 JRNL DOI 10.1128/MCB.00708-09 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 59212.690 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 20843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2050 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2734 REMARK 3 BIN R VALUE (WORKING SET) : 0.4320 REMARK 3 BIN FREE R VALUE : 0.4450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 293 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1436 REMARK 3 NUCLEIC ACID ATOMS : 609 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 83 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : -0.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -22.72000 REMARK 3 B22 (A**2) : -31.49000 REMARK 3 B33 (A**2) : 54.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM SIGMAA (A) : 0.67 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.68 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.170 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.380 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.200 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.910 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 17.76 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3A5T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1000028847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97939, 0.97898, 0.96416 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22101 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 36.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 56.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.19200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 11.91 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 80.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 40MM MAGNESIUM REMARK 280 CHLORIDE HEXAHYDRATE, 8% 2-METHYL-2,4-PENTANDIOL, 4MM TRIS(2- REMARK 280 CARBOXYETHYL)PHOSPHINE, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.13150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 115.13150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 20.18200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 92.62150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 20.18200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 92.62150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 115.13150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 20.18200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 92.62150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 115.13150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 20.18200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 92.62150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 SER A 18 REMARK 465 GLU A 112 REMARK 465 ALA A 113 REMARK 465 LEU A 114 REMARK 465 GLN A 115 REMARK 465 ASN A 116 REMARK 465 PHE A 117 REMARK 465 ALA A 118 REMARK 465 ARG A 119 REMARK 465 THR A 120 REMARK 465 VAL A 121 REMARK 465 ALA A 122 REMARK 465 ARG A 123 REMARK 465 GLY B 17 REMARK 465 SER B 18 REMARK 465 HIS B 19 REMARK 465 ALA B 113 REMARK 465 LEU B 114 REMARK 465 GLN B 115 REMARK 465 ASN B 116 REMARK 465 PHE B 117 REMARK 465 ALA B 118 REMARK 465 ARG B 119 REMARK 465 THR B 120 REMARK 465 VAL B 121 REMARK 465 ALA B 122 REMARK 465 ARG B 123 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 19 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LYS A 92 CG CD CE NZ REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 TYR A 111 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 LYS B 53 CG CD CE NZ REMARK 470 GLN B 87 CG CD OE1 NE2 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 ARG B 108 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 TYR B 111 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 112 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 24 -164.21 -72.22 REMARK 500 MSE A 32 153.55 -40.15 REMARK 500 VAL A 70 -71.99 -49.03 REMARK 500 LYS A 71 -31.38 -36.08 REMARK 500 LYS A 81 15.05 -60.28 REMARK 500 THR B 22 -145.63 -124.44 REMARK 500 GLU B 27 5.30 -57.84 REMARK 500 LEU B 44 122.12 -172.94 REMARK 500 SER B 45 154.72 -39.84 REMARK 500 LEU B 86 28.80 -72.04 REMARK 500 VAL B 90 24.26 -71.03 REMARK 500 MSE B 100 31.61 -89.68 REMARK 500 LYS B 101 -26.36 -148.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG C 6 0.06 SIDE CHAIN REMARK 500 DC D 13 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C2000 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D2001 O REMARK 620 2 HOH D2002 O 119.8 REMARK 620 3 HOH D2003 O 120.6 119.6 REMARK 620 N 1 2 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 2000 DBREF 3A5T A 21 123 UNP O54790 MAFG_MOUSE 21 123 DBREF 3A5T B 21 123 UNP O54790 MAFG_MOUSE 21 123 DBREF 3A5T C 1 15 PDB 3A5T 3A5T 1 15 DBREF 3A5T D 1 15 PDB 3A5T 3A5T 1 15 SEQADV 3A5T GLY A 17 UNP O54790 EXPRESSION TAG SEQADV 3A5T SER A 18 UNP O54790 EXPRESSION TAG SEQADV 3A5T HIS A 19 UNP O54790 EXPRESSION TAG SEQADV 3A5T MSE A 20 UNP O54790 EXPRESSION TAG SEQADV 3A5T GLY B 17 UNP O54790 EXPRESSION TAG SEQADV 3A5T SER B 18 UNP O54790 EXPRESSION TAG SEQADV 3A5T HIS B 19 UNP O54790 EXPRESSION TAG SEQADV 3A5T MSE B 20 UNP O54790 EXPRESSION TAG SEQRES 1 A 107 GLY SER HIS MSE GLY THR SER LEU THR ASP GLU GLU LEU SEQRES 2 A 107 VAL THR MSE SER VAL ARG GLU LEU ASN GLN HIS LEU ARG SEQRES 3 A 107 GLY LEU SER LYS GLU GLU ILE ILE GLN LEU LYS GLN ARG SEQRES 4 A 107 ARG ARG THR LEU LYS ASN ARG GLY TYR ALA ALA SER CYS SEQRES 5 A 107 ARG VAL LYS ARG VAL THR GLN LYS GLU GLU LEU GLU LYS SEQRES 6 A 107 GLN LYS ALA GLU LEU GLN GLN GLU VAL GLU LYS LEU ALA SEQRES 7 A 107 SER GLU ASN ALA SER MSE LYS LEU GLU LEU ASP ALA LEU SEQRES 8 A 107 ARG SER LYS TYR GLU ALA LEU GLN ASN PHE ALA ARG THR SEQRES 9 A 107 VAL ALA ARG SEQRES 1 B 107 GLY SER HIS MSE GLY THR SER LEU THR ASP GLU GLU LEU SEQRES 2 B 107 VAL THR MSE SER VAL ARG GLU LEU ASN GLN HIS LEU ARG SEQRES 3 B 107 GLY LEU SER LYS GLU GLU ILE ILE GLN LEU LYS GLN ARG SEQRES 4 B 107 ARG ARG THR LEU LYS ASN ARG GLY TYR ALA ALA SER CYS SEQRES 5 B 107 ARG VAL LYS ARG VAL THR GLN LYS GLU GLU LEU GLU LYS SEQRES 6 B 107 GLN LYS ALA GLU LEU GLN GLN GLU VAL GLU LYS LEU ALA SEQRES 7 B 107 SER GLU ASN ALA SER MSE LYS LEU GLU LEU ASP ALA LEU SEQRES 8 B 107 ARG SER LYS TYR GLU ALA LEU GLN ASN PHE ALA ARG THR SEQRES 9 B 107 VAL ALA ARG SEQRES 1 C 15 DC DT DG DA DT DG DA DG DT DC DA DG DC SEQRES 2 C 15 DA DC SEQRES 1 D 15 DG DT DG DC DT DG DA DC DT DC DA DT DC SEQRES 2 D 15 DA DG MODRES 3A5T MSE A 20 MET SELENOMETHIONINE MODRES 3A5T MSE A 32 MET SELENOMETHIONINE MODRES 3A5T MSE A 100 MET SELENOMETHIONINE MODRES 3A5T MSE B 20 MET SELENOMETHIONINE MODRES 3A5T MSE B 32 MET SELENOMETHIONINE MODRES 3A5T MSE B 100 MET SELENOMETHIONINE HET MSE A 20 8 HET MSE A 32 8 HET MSE A 100 8 HET MSE B 20 8 HET MSE B 32 8 HET MSE B 100 8 HET MG C2000 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 5 MG MG 2+ FORMUL 6 HOH *83(H2 O) HELIX 1 1 ASP A 26 VAL A 30 1 5 HELIX 2 2 ARG A 35 GLN A 39 1 5 HELIX 3 3 LYS A 46 SER A 99 1 54 HELIX 4 4 ASP B 26 VAL B 30 1 5 HELIX 5 5 ARG B 35 GLN B 39 1 5 HELIX 6 6 LYS B 46 SER B 99 1 54 LINK C HIS A 19 N MSE A 20 1555 1555 1.36 LINK C MSE A 20 N GLY A 21 1555 1555 1.35 LINK C THR A 31 N MSE A 32 1555 1555 1.33 LINK C MSE A 32 N SER A 33 1555 1555 1.33 LINK C SER A 99 N MSE A 100 1555 1555 1.33 LINK C MSE A 100 N LYS A 101 1555 1555 1.33 LINK C MSE B 20 N GLY B 21 1555 1555 1.33 LINK C THR B 31 N MSE B 32 1555 1555 1.33 LINK C MSE B 32 N SER B 33 1555 1555 1.34 LINK C SER B 99 N MSE B 100 1555 1555 1.34 LINK C MSE B 100 N LYS B 101 1555 1555 1.33 LINK MG MG C2000 O HOH D2001 1555 1555 1.84 LINK MG MG C2000 O HOH D2002 1555 1555 1.82 LINK MG MG C2000 O HOH D2003 1555 1555 1.83 SITE 1 AC1 3 HOH D2001 HOH D2002 HOH D2003 CRYST1 40.364 185.243 230.263 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024775 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004343 0.00000