HEADER IMMUNE SYSTEM 20-SEP-09 3A79 TITLE CRYSTAL STRUCTURE OF TLR2-TLR6-PAM2CSK4 COMPLEX CAVEAT 3A79 NAG I 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 2, VARIABLE LYMPHOCYTE RECEPTOR B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN, UNP RESIDUES 1-506(MOUSE), UNP COMPND 5 RESIDUES 133-200(INSHORE HAGFISH); COMPND 6 SYNONYM: TLR2, VLRB.61; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TOLL-LIKE RECEPTOR 6, VARIABLE LYMPHOCYTE RECEPTOR B; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: EXTRACELLULAR DOMAIN, UNP RESIDUES 1-482(MOUSE), UNP COMPND 12 RESIDUES 157-232(INSHORE HAGFISH); COMPND 13 SYNONYM: TLR6, VLRB.59; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: PAM2CSK4; COMPND 17 CHAIN: C; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS, EPTATRETUS BURGERI; SOURCE 3 ORGANISM_COMMON: MOUSE, INSHORE HAGFISH; SOURCE 4 ORGANISM_TAXID: 10090, 7764; SOURCE 5 GENE: TLR2; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HI-5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVL1393; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS, EPTATRETUS BURGERI; SOURCE 13 ORGANISM_COMMON: MOUSE, INSHORE HAGFISH; SOURCE 14 ORGANISM_TAXID: 10090, 7764; SOURCE 15 GENE: TLR6; SOURCE 16 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: HI-5; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PVL1393; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES; SOURCE 23 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 24 ORGANISM_TAXID: 32630; SOURCE 25 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS TOLL-LIKE RECEPTOR, DIACYL LIPOPEPTIDE, INNATE IMMUNITY, LEUCINE RICH KEYWDS 2 REPEAT, CELL MEMBRANE, CYTOPLASMIC VESICLE, DISULFIDE BOND, KEYWDS 3 GLYCOPROTEIN, IMMUNE RESPONSE, INFLAMMATORY RESPONSE, LEUCINE-RICH KEYWDS 4 REPEAT, MEMBRANE, RECEPTOR, TRANSMEMBRANE, PHOSPHOPROTEIN, IMMUNE KEYWDS 5 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.Y.KANG,M.S.JIN,J.-O.LEE REVDAT 8 01-NOV-23 3A79 1 HETSYN REVDAT 7 29-JUL-20 3A79 1 CAVEAT COMPND REMARK DBREF REVDAT 7 2 1 SEQADV HET HETNAM FORMUL REVDAT 7 3 1 LINK SITE ATOM REVDAT 6 16-AUG-17 3A79 1 SOURCE REVDAT 5 09-AUG-17 3A79 1 SOURCE REVDAT 4 27-JUN-12 3A79 1 HETATM REVDAT 3 13-JUL-11 3A79 1 VERSN REVDAT 2 09-FEB-10 3A79 1 JRNL REVDAT 1 24-NOV-09 3A79 0 JRNL AUTH J.Y.KANG,X.NAN,M.S.JIN,S.-J.YOUN,Y.H.RYU,S.MAH,S.H.HAN, JRNL AUTH 2 H.LEE,S.-G.PAIK,J.-O.LEE JRNL TITL RECOGNITION OF LIPOPEPTIDE PATTERNS BY TOLL-LIKE RECEPTOR JRNL TITL 2 2-TOLL-LIKE RECEPTOR 6 HETERODIMER JRNL REF IMMUNITY V. 31 873 2009 JRNL REFN ISSN 1074-7613 JRNL PMID 19931471 JRNL DOI 10.1016/J.IMMUNI.2009.09.018 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 43573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.160 REMARK 3 FREE R VALUE TEST SET COUNT : 4429 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1110 - 8.9580 0.97 1434 157 0.2450 0.2760 REMARK 3 2 8.9580 - 7.1320 1.00 1365 167 0.2140 0.3060 REMARK 3 3 7.1320 - 6.2360 1.00 1356 144 0.2040 0.2530 REMARK 3 4 6.2360 - 5.6690 1.00 1336 159 0.1980 0.2970 REMARK 3 5 5.6690 - 5.2640 1.00 1327 149 0.1710 0.2480 REMARK 3 6 5.2640 - 4.9550 1.00 1338 143 0.1610 0.2410 REMARK 3 7 4.9550 - 4.7070 1.00 1304 155 0.1350 0.2060 REMARK 3 8 4.7070 - 4.5030 1.00 1320 147 0.1430 0.2100 REMARK 3 9 4.5030 - 4.3300 0.99 1299 143 0.1450 0.1980 REMARK 3 10 4.3300 - 4.1810 1.00 1310 145 0.1520 0.2480 REMARK 3 11 4.1810 - 4.0500 0.99 1296 145 0.1650 0.2220 REMARK 3 12 4.0500 - 3.9350 1.00 1279 162 0.1700 0.2480 REMARK 3 13 3.9350 - 3.8310 1.00 1300 147 0.1690 0.2340 REMARK 3 14 3.8310 - 3.7380 1.00 1281 159 0.1720 0.2380 REMARK 3 15 3.7380 - 3.6530 1.00 1304 138 0.1660 0.2540 REMARK 3 16 3.6530 - 3.5750 1.00 1290 143 0.1850 0.2520 REMARK 3 17 3.5750 - 3.5040 1.00 1306 146 0.1960 0.2840 REMARK 3 18 3.5040 - 3.4380 1.00 1306 122 0.1980 0.2980 REMARK 3 19 3.4380 - 3.3770 1.00 1288 150 0.2110 0.2850 REMARK 3 20 3.3770 - 3.3190 1.00 1301 145 0.2200 0.3190 REMARK 3 21 3.3190 - 3.2660 1.00 1280 144 0.2280 0.3190 REMARK 3 22 3.2660 - 3.2160 1.00 1294 142 0.2290 0.3170 REMARK 3 23 3.2160 - 3.1680 1.00 1290 146 0.2430 0.3310 REMARK 3 24 3.1680 - 3.1240 1.00 1259 149 0.2460 0.3370 REMARK 3 25 3.1240 - 3.0820 1.00 1277 154 0.2490 0.3160 REMARK 3 26 3.0820 - 3.0420 1.00 1280 159 0.2700 0.3330 REMARK 3 27 3.0420 - 3.0040 1.00 1278 142 0.2840 0.3770 REMARK 3 28 3.0040 - 2.9670 1.00 1281 144 0.3040 0.3540 REMARK 3 29 2.9670 - 2.9330 1.00 1285 151 0.3010 0.3980 REMARK 3 30 2.9330 - 2.9000 1.00 1280 132 0.3400 0.4120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.28 REMARK 3 B_SOL : 31.28 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 2.750 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.21400 REMARK 3 B22 (A**2) : -1.21400 REMARK 3 B33 (A**2) : -28.38400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9122 REMARK 3 ANGLE : 1.251 12385 REMARK 3 CHIRALITY : 0.076 1479 REMARK 3 PLANARITY : 0.004 1526 REMARK 3 DIHEDRAL : 22.858 3482 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 14.6701 -35.8269 15.2995 REMARK 3 T TENSOR REMARK 3 T11: 0.3303 T22: 0.1446 REMARK 3 T33: 0.3728 T12: 0.0646 REMARK 3 T13: -0.1518 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 2.2887 L22: 0.7151 REMARK 3 L33: 1.3447 L12: -0.8401 REMARK 3 L13: 0.9857 L23: -0.1251 REMARK 3 S TENSOR REMARK 3 S11: 0.2079 S12: 0.0934 S13: 0.0862 REMARK 3 S21: -0.1321 S22: -0.0438 S23: -0.0604 REMARK 3 S31: 0.2734 S32: 0.0322 S33: -0.1429 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 55.8446 -34.5506 35.5039 REMARK 3 T TENSOR REMARK 3 T11: 0.3214 T22: 0.3344 REMARK 3 T33: 0.2798 T12: -0.0689 REMARK 3 T13: -0.0721 T23: -0.0761 REMARK 3 L TENSOR REMARK 3 L11: 1.8496 L22: 1.1234 REMARK 3 L33: 1.3299 L12: -0.3520 REMARK 3 L13: 0.1094 L23: 0.0207 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.2448 S13: 0.1595 REMARK 3 S21: -0.0351 S22: -0.0532 S23: 0.0233 REMARK 3 S31: -0.2779 S32: 0.2688 S33: 0.0509 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 21.0865 -41.9193 42.8576 REMARK 3 T TENSOR REMARK 3 T11: 0.6976 T22: 0.6385 REMARK 3 T33: 0.6195 T12: 0.0681 REMARK 3 T13: -0.4255 T23: -0.1103 REMARK 3 L TENSOR REMARK 3 L11: 0.6819 L22: 0.7414 REMARK 3 L33: -0.3202 L12: -0.0475 REMARK 3 L13: -0.6433 L23: -0.0021 REMARK 3 S TENSOR REMARK 3 S11: 0.0239 S12: -0.4467 S13: 0.1462 REMARK 3 S21: -0.0866 S22: 0.0906 S23: 0.2312 REMARK 3 S31: -0.0186 S32: 0.0657 S33: -0.0124 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3A79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1000028899. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87260 REMARK 200 MONOCHROMATOR : SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43573 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10600 REMARK 200 FOR THE DATA SET : 8.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.55 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.52500 REMARK 200 FOR SHELL : 2.330 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2Z81, 2Z7X, 2O6R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.11767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 154.23533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 115.67650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 192.79417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.55883 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.11767 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 154.23533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 192.79417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 115.67650 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.55883 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 LEU A 5 REMARK 465 TRP A 6 REMARK 465 LEU A 7 REMARK 465 PHE A 8 REMARK 465 TRP A 9 REMARK 465 ILE A 10 REMARK 465 LEU A 11 REMARK 465 VAL A 12 REMARK 465 ALA A 13 REMARK 465 ILE A 14 REMARK 465 THR A 15 REMARK 465 VAL A 16 REMARK 465 LEU A 17 REMARK 465 PHE A 18 REMARK 465 SER A 19 REMARK 465 LYS A 20 REMARK 465 ARG A 21 REMARK 465 CYS A 22 REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 GLN A 25 REMARK 465 THR A 576 REMARK 465 LEU A 577 REMARK 465 VAL A 578 REMARK 465 PRO A 579 REMARK 465 ARG A 580 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLN B 3 REMARK 465 ASP B 4 REMARK 465 ARG B 5 REMARK 465 LYS B 6 REMARK 465 PRO B 7 REMARK 465 ILE B 8 REMARK 465 VAL B 9 REMARK 465 GLY B 10 REMARK 465 SER B 11 REMARK 465 PHE B 12 REMARK 465 HIS B 13 REMARK 465 PHE B 14 REMARK 465 VAL B 15 REMARK 465 CYS B 16 REMARK 465 ALA B 17 REMARK 465 LEU B 18 REMARK 465 ALA B 19 REMARK 465 LEU B 20 REMARK 465 ILE B 21 REMARK 465 VAL B 22 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 MET B 25 REMARK 465 THR B 26 REMARK 465 PRO B 27 REMARK 465 PHE B 28 REMARK 465 SER B 29 REMARK 465 ASN B 30 REMARK 465 GLU B 31 REMARK 465 LEU B 32 REMARK 465 THR B 558 REMARK 465 LEU B 559 REMARK 465 VAL B 560 REMARK 465 PRO B 561 REMARK 465 ARG B 562 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 218 O6 NAG B 981 1.79 REMARK 500 CG ASN B 195 C1 NAG B 981 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 135 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO A 250 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 29 -127.76 -99.19 REMARK 500 CYS A 30 177.16 141.12 REMARK 500 ARG A 39 -119.64 -59.62 REMARK 500 SER A 40 20.04 -77.33 REMARK 500 SER A 42 89.37 -67.18 REMARK 500 PRO A 47 121.16 -36.60 REMARK 500 LEU A 59 51.10 -113.91 REMARK 500 PHE A 61 44.51 71.40 REMARK 500 LYS A 63 52.01 -105.73 REMARK 500 SER A 86 -145.98 -80.53 REMARK 500 ASP A 109 38.08 70.50 REMARK 500 HIS A 111 40.37 -103.90 REMARK 500 LEU A 112 95.75 -68.37 REMARK 500 LEU A 123 46.68 -86.85 REMARK 500 SER A 124 -7.63 -50.71 REMARK 500 PRO A 135 30.98 -66.12 REMARK 500 ASN A 147 49.01 -105.29 REMARK 500 LEU A 186 100.35 -53.31 REMARK 500 GLN A 192 18.64 82.13 REMARK 500 ARG A 236 53.33 -118.74 REMARK 500 SER A 240 142.88 -172.12 REMARK 500 VAL A 244 154.39 -38.82 REMARK 500 GLU A 246 86.36 -58.87 REMARK 500 ARG A 257 -78.68 -87.98 REMARK 500 ILE A 276 71.70 -115.00 REMARK 500 ASP A 285 -133.09 -92.18 REMARK 500 ASP A 286 71.14 -64.97 REMARK 500 LEU A 292 19.97 -150.50 REMARK 500 SER A 298 153.55 -44.55 REMARK 500 GLN A 321 54.42 -111.24 REMARK 500 LEU A 350 128.83 -170.57 REMARK 500 ASN A 370 -151.79 -115.64 REMARK 500 ALA A 381 68.51 -109.85 REMARK 500 TRP A 386 51.20 39.86 REMARK 500 ASN A 397 -154.36 -103.33 REMARK 500 SER A 417 113.13 -160.89 REMARK 500 THR A 424 66.00 -60.91 REMARK 500 ASN A 467 -147.83 -126.69 REMARK 500 LEU A 479 106.64 -49.01 REMARK 500 ILE A 484 37.46 -145.32 REMARK 500 SER A 485 -165.83 -69.56 REMARK 500 ARG A 486 60.56 25.43 REMARK 500 PHE A 498 77.92 -158.06 REMARK 500 LEU A 501 143.14 -33.15 REMARK 500 MET A 504 89.53 -152.53 REMARK 500 SER A 508 49.90 29.17 REMARK 500 ASN A 509 -165.76 -116.47 REMARK 500 PHE A 519 35.86 -86.74 REMARK 500 THR A 523 13.98 -68.51 REMARK 500 SER A 524 -32.75 -130.11 REMARK 500 REMARK 500 THIS ENTRY HAS 117 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 248 PRO B 249 142.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3A7B RELATED DB: PDB REMARK 900 TLR2-PNLTA COMPLEX REMARK 900 RELATED ID: 3A7C RELATED DB: PDB REMARK 900 TLR2-PE-DTPA COMPLEX DBREF 3A79 A 1 506 UNP Q9QUN7 TLR2_MOUSE 1 506 DBREF 3A79 A 509 576 UNP Q4G1L2 Q4G1L2_EPTBU 133 200 DBREF 3A79 B 1 482 UNP Q9EPW9 TLR6_MOUSE 1 482 DBREF 3A79 B 483 558 UNP Q4G1L3 Q4G1L3_EPTBU 157 232 DBREF 3A79 C 11 16 PDB 3A79 3A79 11 16 SEQADV 3A79 ALA A 507 UNP Q4G1L2 LINKER SEQADV 3A79 SER A 508 UNP Q4G1L2 LINKER SEQADV 3A79 LEU A 577 UNP Q4G1L2 EXPRESSION TAG SEQADV 3A79 VAL A 578 UNP Q4G1L2 EXPRESSION TAG SEQADV 3A79 PRO A 579 UNP Q4G1L2 EXPRESSION TAG SEQADV 3A79 ARG A 580 UNP Q4G1L2 EXPRESSION TAG SEQADV 3A79 LEU B 559 UNP Q4G1L3 EXPRESSION TAG SEQADV 3A79 VAL B 560 UNP Q4G1L3 EXPRESSION TAG SEQADV 3A79 PRO B 561 UNP Q4G1L3 EXPRESSION TAG SEQADV 3A79 ARG B 562 UNP Q4G1L3 EXPRESSION TAG SEQRES 1 A 580 MET LEU ARG ALA LEU TRP LEU PHE TRP ILE LEU VAL ALA SEQRES 2 A 580 ILE THR VAL LEU PHE SER LYS ARG CYS SER ALA GLN GLU SEQRES 3 A 580 SER LEU SER CYS ASP ALA SER GLY VAL CYS ASP GLY ARG SEQRES 4 A 580 SER ARG SER PHE THR SER ILE PRO SER GLY LEU THR ALA SEQRES 5 A 580 ALA MET LYS SER LEU ASP LEU SER PHE ASN LYS ILE THR SEQRES 6 A 580 TYR ILE GLY HIS GLY ASP LEU ARG ALA CYS ALA ASN LEU SEQRES 7 A 580 GLN VAL LEU ILE LEU LYS SER SER ARG ILE ASN THR ILE SEQRES 8 A 580 GLU GLY ASP ALA PHE TYR SER LEU GLY SER LEU GLU HIS SEQRES 9 A 580 LEU ASP LEU SER ASP ASN HIS LEU SER SER LEU SER SER SEQRES 10 A 580 SER TRP PHE GLY PRO LEU SER SER LEU LYS TYR LEU ASN SEQRES 11 A 580 LEU MET GLY ASN PRO TYR GLN THR LEU GLY VAL THR SER SEQRES 12 A 580 LEU PHE PRO ASN LEU THR ASN LEU GLN THR LEU ARG ILE SEQRES 13 A 580 GLY ASN VAL GLU THR PHE SER GLU ILE ARG ARG ILE ASP SEQRES 14 A 580 PHE ALA GLY LEU THR SER LEU ASN GLU LEU GLU ILE LYS SEQRES 15 A 580 ALA LEU SER LEU ARG ASN TYR GLN SER GLN SER LEU LYS SEQRES 16 A 580 SER ILE ARG ASP ILE HIS HIS LEU THR LEU HIS LEU SER SEQRES 17 A 580 GLU SER ALA PHE LEU LEU GLU ILE PHE ALA ASP ILE LEU SEQRES 18 A 580 SER SER VAL ARG TYR LEU GLU LEU ARG ASP THR ASN LEU SEQRES 19 A 580 ALA ARG PHE GLN PHE SER PRO LEU PRO VAL ASP GLU VAL SEQRES 20 A 580 SER SER PRO MET LYS LYS LEU ALA PHE ARG GLY SER VAL SEQRES 21 A 580 LEU THR ASP GLU SER PHE ASN GLU LEU LEU LYS LEU LEU SEQRES 22 A 580 ARG TYR ILE LEU GLU LEU SER GLU VAL GLU PHE ASP ASP SEQRES 23 A 580 CYS THR LEU ASN GLY LEU GLY ASP PHE ASN PRO SER GLU SEQRES 24 A 580 SER ASP VAL VAL SER GLU LEU GLY LYS VAL GLU THR VAL SEQRES 25 A 580 THR ILE ARG ARG LEU HIS ILE PRO GLN PHE TYR LEU PHE SEQRES 26 A 580 TYR ASP LEU SER THR VAL TYR SER LEU LEU GLU LYS VAL SEQRES 27 A 580 LYS ARG ILE THR VAL GLU ASN SER LYS VAL PHE LEU VAL SEQRES 28 A 580 PRO CYS SER PHE SER GLN HIS LEU LYS SER LEU GLU PHE SEQRES 29 A 580 LEU ASP LEU SER GLU ASN LEU MET VAL GLU GLU TYR LEU SEQRES 30 A 580 LYS ASN SER ALA CYS LYS GLY ALA TRP PRO SER LEU GLN SEQRES 31 A 580 THR LEU VAL LEU SER GLN ASN HIS LEU ARG SER MET GLN SEQRES 32 A 580 LYS THR GLY GLU ILE LEU LEU THR LEU LYS ASN LEU THR SEQRES 33 A 580 SER LEU ASP ILE SER ARG ASN THR PHE HIS PRO MET PRO SEQRES 34 A 580 ASP SER CYS GLN TRP PRO GLU LYS MET ARG PHE LEU ASN SEQRES 35 A 580 LEU SER SER THR GLY ILE ARG VAL VAL LYS THR CYS ILE SEQRES 36 A 580 PRO GLN THR LEU GLU VAL LEU ASP VAL SER ASN ASN ASN SEQRES 37 A 580 LEU ASP SER PHE SER LEU PHE LEU PRO ARG LEU GLN GLU SEQRES 38 A 580 LEU TYR ILE SER ARG ASN LYS LEU LYS THR LEU PRO ASP SEQRES 39 A 580 ALA SER LEU PHE PRO VAL LEU LEU VAL MET LYS ILE ALA SEQRES 40 A 580 SER ASN GLN LEU LYS SER VAL PRO ASP GLY ILE PHE ASP SEQRES 41 A 580 ARG LEU THR SER LEU GLN LYS ILE TRP LEU HIS THR ASN SEQRES 42 A 580 PRO TRP ASP CYS SER CYS PRO ARG ILE ASP TYR LEU SER SEQRES 43 A 580 ARG TRP LEU ASN LYS ASN SER GLN LYS GLU GLN GLY SER SEQRES 44 A 580 ALA LYS CYS SER GLY SER GLY LYS PRO VAL ARG SER ILE SEQRES 45 A 580 ILE CYS PRO THR LEU VAL PRO ARG SEQRES 1 B 562 MET SER GLN ASP ARG LYS PRO ILE VAL GLY SER PHE HIS SEQRES 2 B 562 PHE VAL CYS ALA LEU ALA LEU ILE VAL GLY SER MET THR SEQRES 3 B 562 PRO PHE SER ASN GLU LEU GLU SER MET VAL ASP TYR SER SEQRES 4 B 562 ASN ARG ASN LEU THR HIS VAL PRO LYS ASP LEU PRO PRO SEQRES 5 B 562 ARG THR LYS ALA LEU SER LEU SER GLN ASN SER ILE SER SEQRES 6 B 562 GLU LEU ARG MET PRO ASP ILE SER PHE LEU SER GLU LEU SEQRES 7 B 562 ARG VAL LEU ARG LEU SER HIS ASN ARG ILE ARG SER LEU SEQRES 8 B 562 ASP PHE HIS VAL PHE LEU PHE ASN GLN ASP LEU GLU TYR SEQRES 9 B 562 LEU ASP VAL SER HIS ASN ARG LEU GLN ASN ILE SER CYS SEQRES 10 B 562 CYS PRO MET ALA SER LEU ARG HIS LEU ASP LEU SER PHE SEQRES 11 B 562 ASN ASP PHE ASP VAL LEU PRO VAL CYS LYS GLU PHE GLY SEQRES 12 B 562 ASN LEU THR LYS LEU THR PHE LEU GLY LEU SER ALA ALA SEQRES 13 B 562 LYS PHE ARG GLN LEU ASP LEU LEU PRO VAL ALA HIS LEU SEQRES 14 B 562 HIS LEU SER CYS ILE LEU LEU ASP LEU VAL SER TYR HIS SEQRES 15 B 562 ILE LYS GLY GLY GLU THR GLU SER LEU GLN ILE PRO ASN SEQRES 16 B 562 THR THR VAL LEU HIS LEU VAL PHE HIS PRO ASN SER LEU SEQRES 17 B 562 PHE SER VAL GLN VAL ASN MET SER VAL ASN ALA LEU GLY SEQRES 18 B 562 HIS LEU GLN LEU SER ASN ILE LYS LEU ASN ASP GLU ASN SEQRES 19 B 562 CYS GLN ARG LEU MET THR PHE LEU SER GLU LEU THR ARG SEQRES 20 B 562 GLY PRO THR LEU LEU ASN VAL THR LEU GLN HIS ILE GLU SEQRES 21 B 562 THR THR TRP LYS CYS SER VAL LYS LEU PHE GLN PHE PHE SEQRES 22 B 562 TRP PRO ARG PRO VAL GLU TYR LEU ASN ILE TYR ASN LEU SEQRES 23 B 562 THR ILE THR GLU ARG ILE ASP ARG GLU GLU PHE THR TYR SEQRES 24 B 562 SER GLU THR ALA LEU LYS SER LEU MET ILE GLU HIS VAL SEQRES 25 B 562 LYS ASN GLN VAL PHE LEU PHE SER LYS GLU ALA LEU TYR SEQRES 26 B 562 SER VAL PHE ALA GLU MET ASN ILE LYS MET LEU SER ILE SEQRES 27 B 562 SER ASP THR PRO PHE ILE HIS MET VAL CYS PRO PRO SER SEQRES 28 B 562 PRO SER SER PHE THR PHE LEU ASN PHE THR GLN ASN VAL SEQRES 29 B 562 PHE THR ASP SER VAL PHE GLN GLY CYS SER THR LEU LYS SEQRES 30 B 562 ARG LEU GLN THR LEU ILE LEU GLN ARG ASN GLY LEU LYS SEQRES 31 B 562 ASN PHE PHE LYS VAL ALA LEU MET THR LYS ASN MET SER SEQRES 32 B 562 SER LEU GLU THR LEU ASP VAL SER LEU ASN SER LEU ASN SEQRES 33 B 562 SER HIS ALA TYR ASP ARG THR CYS ALA TRP ALA GLU SER SEQRES 34 B 562 ILE LEU VAL LEU ASN LEU SER SER ASN MET LEU THR GLY SEQRES 35 B 562 SER VAL PHE ARG CYS LEU PRO PRO LYS VAL LYS VAL LEU SEQRES 36 B 562 ASP LEU HIS ASN ASN ARG ILE MET SER ILE PRO LYS ASP SEQRES 37 B 562 VAL THR HIS LEU GLN ALA LEU GLN GLU LEU ASN VAL ALA SEQRES 38 B 562 SER ASN GLN LEU LYS SER VAL PRO ASP GLY VAL PHE ASP SEQRES 39 B 562 ARG LEU THR SER LEU GLN TYR ILE TRP LEU HIS ASP ASN SEQRES 40 B 562 PRO TRP ASP CYS THR CYS PRO GLY ILE ARG TYR LEU SER SEQRES 41 B 562 GLU TRP ILE ASN LYS HIS SER GLY VAL VAL ARG ASN SER SEQRES 42 B 562 ALA GLY SER VAL ALA PRO ASP SER ALA LYS CYS SER GLY SEQRES 43 B 562 SER GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR LEU SEQRES 44 B 562 VAL PRO ARG SEQRES 1 C 6 CYS SER LYS LYS LYS LYS MODRES 3A79 ASN A 147 ASN GLYCOSYLATION SITE MODRES 3A79 ASN A 414 ASN GLYCOSYLATION SITE MODRES 3A79 ASN A 442 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 144 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 195 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 214 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 253 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 285 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 359 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 401 ASN GLYCOSYLATION SITE MODRES 3A79 ASN B 434 ASN GLYCOSYLATION SITE HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET NAG I 1 14 HET NAG I 2 14 HET NAG A 811 14 HET NAG A 821 14 HET NAG B 911 14 HET NAG B 921 14 HET NAG B 981 14 HET PXS C 581 39 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM PXS (2S)-PROPANE-1,2-DIYL DIHEXADECANOATE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 17(C8 H15 N O6) FORMUL 6 BMA 3(C6 H12 O6) FORMUL 15 PXS C35 H68 O4 HELIX 1 1 GLU A 209 ALA A 211 5 3 HELIX 2 2 PHE A 212 ILE A 220 1 9 HELIX 3 3 ASP A 263 LEU A 270 1 8 HELIX 4 4 LYS A 271 TYR A 275 5 5 HELIX 5 5 SER A 298 GLU A 305 1 8 HELIX 6 6 GLN A 321 PHE A 325 5 5 HELIX 7 7 LEU A 328 TYR A 332 5 5 HELIX 8 8 PRO A 352 LEU A 359 1 8 HELIX 9 9 VAL A 373 ALA A 381 1 9 HELIX 10 10 SER A 401 LEU A 409 1 9 HELIX 11 11 LEU A 410 LEU A 412 5 3 HELIX 12 12 ILE A 542 ASN A 552 1 11 HELIX 13 13 ARG B 68 ILE B 72 5 5 HELIX 14 14 CYS B 139 LEU B 145 5 7 HELIX 15 15 LEU B 163 ALA B 167 5 5 HELIX 16 16 ASN B 234 ARG B 247 1 14 HELIX 17 17 THR B 262 TRP B 274 1 13 HELIX 18 18 SER B 320 GLU B 330 1 11 HELIX 19 19 PHE B 393 MET B 398 1 6 HELIX 20 20 THR B 441 ARG B 446 5 6 HELIX 21 21 THR B 512 HIS B 526 1 15 SHEET 1 A19 VAL A 35 ASP A 37 0 SHEET 2 A19 SER A 56 ASP A 58 1 O ASP A 58 N CYS A 36 SHEET 3 A19 VAL A 80 ILE A 82 1 O ILE A 82 N LEU A 57 SHEET 4 A19 HIS A 104 ASP A 106 1 O HIS A 104 N LEU A 81 SHEET 5 A19 TYR A 128 ASN A 130 1 O TYR A 128 N LEU A 105 SHEET 6 A19 THR A 153 ASN A 158 1 O THR A 153 N LEU A 129 SHEET 7 A19 SER A 175 ALA A 183 1 O LYS A 182 N ILE A 156 SHEET 8 A19 ASP A 199 HIS A 206 1 O THR A 204 N LEU A 179 SHEET 9 A19 TYR A 226 ARG A 230 1 O ARG A 230 N LEU A 205 SHEET 10 A19 LYS A 253 PHE A 256 1 O ALA A 255 N LEU A 229 SHEET 11 A19 GLU A 281 PHE A 284 1 O GLU A 283 N PHE A 256 SHEET 12 A19 THR A 311 ARG A 315 1 O THR A 313 N VAL A 282 SHEET 13 A19 ARG A 340 GLU A 344 1 O THR A 342 N ILE A 314 SHEET 14 A19 PHE A 364 ASP A 366 1 O ASP A 366 N VAL A 343 SHEET 15 A19 THR A 391 VAL A 393 1 O VAL A 393 N LEU A 365 SHEET 16 A19 SER A 417 ASP A 419 1 O SER A 417 N LEU A 392 SHEET 17 A19 PHE A 440 ASN A 442 1 O PHE A 440 N LEU A 418 SHEET 18 A19 VAL A 461 ASP A 463 1 O VAL A 461 N LEU A 441 SHEET 19 A19 GLU A 481 TYR A 483 1 O TYR A 483 N LEU A 462 SHEET 1 B 2 TYR A 66 ILE A 67 0 SHEET 2 B 2 THR A 90 ILE A 91 1 O THR A 90 N ILE A 67 SHEET 1 C 2 GLU A 164 ILE A 165 0 SHEET 2 C 2 ASN A 188 TYR A 189 1 O ASN A 188 N ILE A 165 SHEET 1 D 2 VAL A 260 THR A 262 0 SHEET 2 D 2 THR A 288 ASN A 290 1 O THR A 288 N LEU A 261 SHEET 1 E 2 VAL A 503 LYS A 505 0 SHEET 2 E 2 LYS A 527 TRP A 529 1 O TRP A 529 N MET A 504 SHEET 1 F19 MET B 35 ASP B 37 0 SHEET 2 F19 ALA B 56 SER B 58 1 O ALA B 56 N VAL B 36 SHEET 3 F19 VAL B 80 ARG B 82 1 O VAL B 80 N LEU B 57 SHEET 4 F19 TYR B 104 ASP B 106 1 O TYR B 104 N LEU B 81 SHEET 5 F19 HIS B 125 ASP B 127 1 O HIS B 125 N LEU B 105 SHEET 6 F19 PHE B 150 SER B 154 1 O PHE B 150 N LEU B 126 SHEET 7 F19 LEU B 171 LEU B 178 1 O LEU B 175 N LEU B 153 SHEET 8 F19 THR B 196 PHE B 203 1 O VAL B 202 N LEU B 178 SHEET 9 F19 LEU B 220 LYS B 229 1 O GLN B 224 N LEU B 201 SHEET 10 F19 LEU B 252 THR B 261 1 O ASN B 253 N GLY B 221 SHEET 11 F19 VAL B 278 ILE B 288 1 O ASN B 282 N VAL B 254 SHEET 12 F19 SER B 306 ASN B 314 1 O SER B 306 N LEU B 281 SHEET 13 F19 MET B 335 SER B 339 1 O SER B 337 N ILE B 309 SHEET 14 F19 PHE B 357 ASN B 359 1 O PHE B 357 N LEU B 336 SHEET 15 F19 THR B 381 ILE B 383 1 O THR B 381 N LEU B 358 SHEET 16 F19 THR B 407 ASP B 409 1 O THR B 407 N LEU B 382 SHEET 17 F19 VAL B 432 ASN B 434 1 O VAL B 432 N LEU B 408 SHEET 18 F19 VAL B 454 ASP B 456 1 O VAL B 454 N LEU B 433 SHEET 19 F19 GLU B 477 ASN B 479 1 O ASN B 479 N LEU B 455 SHEET 1 G 2 SER B 90 LEU B 91 0 SHEET 2 G 2 ASN B 114 ILE B 115 1 O ASN B 114 N LEU B 91 SHEET 1 H 2 SER B 190 ILE B 193 0 SHEET 2 H 2 ASN B 214 VAL B 217 1 O SER B 216 N ILE B 193 SHEET 1 I 2 ILE B 502 TRP B 503 0 SHEET 2 I 2 VAL B 530 ARG B 531 1 O ARG B 531 N ILE B 502 SSBOND 1 CYS A 30 CYS A 36 1555 1555 2.03 SSBOND 2 CYS A 353 CYS A 382 1555 1555 2.05 SSBOND 3 CYS A 432 CYS A 454 1555 1555 2.05 SSBOND 4 CYS A 537 CYS A 562 1555 1555 2.03 SSBOND 5 CYS A 539 CYS A 574 1555 1555 2.03 SSBOND 6 CYS B 117 CYS B 139 1555 1555 2.04 SSBOND 7 CYS B 235 CYS B 265 1555 1555 2.06 SSBOND 8 CYS B 348 CYS B 373 1555 1555 2.03 SSBOND 9 CYS B 424 CYS B 447 1555 1555 2.04 SSBOND 10 CYS B 511 CYS B 544 1555 1555 2.03 SSBOND 11 CYS B 513 CYS B 556 1555 1555 2.03 LINK ND2 ASN A 147 C1 NAG A 811 1555 1555 1.45 LINK ND2 ASN A 414 C1 NAG A 821 1555 1555 1.44 LINK ND2 ASN A 442 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN B 144 C1 NAG B 911 1555 1555 1.46 LINK ND2 ASN B 195 C1 NAG B 981 1555 1555 1.47 LINK ND2 ASN B 214 C1 NAG B 921 1555 1555 1.46 LINK ND2 ASN B 253 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B 285 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN B 359 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 401 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN B 434 C1 NAG I 1 1555 1555 1.45 LINK SG CYS C 11 C20 PXS C 581 1555 1555 1.78 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 CRYST1 168.901 168.901 231.353 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005921 0.003418 0.000000 0.00000 SCALE2 0.000000 0.006837 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004322 0.00000