data_3ACA # _entry.id 3ACA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3ACA pdb_00003aca 10.2210/pdb3aca/pdb RCSB RCSB029076 ? ? WWPDB D_1000029076 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3L85 'The same protein in complex with 8-oxo-dGMP' unspecified PDB 3AC9 'The same protein in complex with 8-oxo-dGDP and manganese' unspecified # _pdbx_database_status.entry_id 3ACA _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-12-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Arimori, T.' 1 'Yamagata, Y.' 2 # _citation.id primary _citation.title 'Diverse substrate recognition and hydrolysis mechanisms of human NUDT5' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 39 _citation.page_first 8972 _citation.page_last 8983 _citation.year 2011 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21768126 _citation.pdbx_database_id_DOI 10.1093/nar/gkr575 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arimori, T.' 1 ? primary 'Tamaoki, H.' 2 ? primary 'Nakamura, T.' 3 ? primary 'Kamiya, H.' 4 ? primary 'Ikemizu, S.' 5 ? primary 'Takagi, Y.' 6 ? primary 'Ishibashi, T.' 7 ? primary 'Harashima, H.' 8 ? primary 'Sekiguchi, M.' 9 ? primary 'Yamagata, Y.' 10 ? # _cell.entry_id 3ACA _cell.length_a 113.636 _cell.length_b 40.701 _cell.length_c 99.791 _cell.angle_alpha 90.00 _cell.angle_beta 121.64 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3ACA _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADP-sugar pyrophosphatase' 21700.643 2 3.6.1.13 ? 'residues 13-208' ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 5 ? ? ? ? 3 non-polymer syn "8-oxo-7,8-dihydro-2'-deoxy-adenosine-5'-diphosphate" 427.201 2 ? ? ? ? 4 water nat water 18.015 250 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'NUDT5, Nucleoside diphosphate-linked moiety X motif 5, Nudix motif 5, YSA1H' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCI EFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVIS LPKNDLLQRLDALVAEEHLTVDARVYSYALALKHAN ; _entity_poly.pdbx_seq_one_letter_code_can ;GKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCI EFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVIS LPKNDLLQRLDALVAEEHLTVDARVYSYALALKHAN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LYS n 1 3 GLN n 1 4 TYR n 1 5 ILE n 1 6 ILE n 1 7 SER n 1 8 GLU n 1 9 GLU n 1 10 LEU n 1 11 ILE n 1 12 SER n 1 13 GLU n 1 14 GLY n 1 15 LYS n 1 16 TRP n 1 17 VAL n 1 18 LYS n 1 19 LEU n 1 20 GLU n 1 21 LYS n 1 22 THR n 1 23 THR n 1 24 TYR n 1 25 MET n 1 26 ASP n 1 27 PRO n 1 28 THR n 1 29 GLY n 1 30 LYS n 1 31 THR n 1 32 ARG n 1 33 THR n 1 34 TRP n 1 35 GLU n 1 36 SER n 1 37 VAL n 1 38 LYS n 1 39 ARG n 1 40 THR n 1 41 THR n 1 42 ARG n 1 43 LYS n 1 44 GLU n 1 45 GLN n 1 46 THR n 1 47 ALA n 1 48 ASP n 1 49 GLY n 1 50 VAL n 1 51 ALA n 1 52 VAL n 1 53 ILE n 1 54 PRO n 1 55 VAL n 1 56 LEU n 1 57 GLN n 1 58 ARG n 1 59 THR n 1 60 LEU n 1 61 HIS n 1 62 TYR n 1 63 GLU n 1 64 CYS n 1 65 ILE n 1 66 VAL n 1 67 LEU n 1 68 VAL n 1 69 LYS n 1 70 GLN n 1 71 PHE n 1 72 ARG n 1 73 PRO n 1 74 PRO n 1 75 MET n 1 76 GLY n 1 77 GLY n 1 78 TYR n 1 79 CYS n 1 80 ILE n 1 81 GLU n 1 82 PHE n 1 83 PRO n 1 84 ALA n 1 85 GLY n 1 86 LEU n 1 87 ILE n 1 88 ASP n 1 89 ASP n 1 90 GLY n 1 91 GLU n 1 92 THR n 1 93 PRO n 1 94 GLU n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 LEU n 1 102 GLU n 1 103 GLU n 1 104 GLU n 1 105 THR n 1 106 GLY n 1 107 TYR n 1 108 LYS n 1 109 GLY n 1 110 ASP n 1 111 ILE n 1 112 ALA n 1 113 GLU n 1 114 CYS n 1 115 SER n 1 116 PRO n 1 117 ALA n 1 118 VAL n 1 119 CYS n 1 120 MET n 1 121 ASP n 1 122 PRO n 1 123 GLY n 1 124 LEU n 1 125 SER n 1 126 ASN n 1 127 CYS n 1 128 THR n 1 129 ILE n 1 130 HIS n 1 131 ILE n 1 132 VAL n 1 133 THR n 1 134 VAL n 1 135 THR n 1 136 ILE n 1 137 ASN n 1 138 GLY n 1 139 ASP n 1 140 ASP n 1 141 ALA n 1 142 GLU n 1 143 ASN n 1 144 ALA n 1 145 ARG n 1 146 PRO n 1 147 LYS n 1 148 PRO n 1 149 LYS n 1 150 PRO n 1 151 GLY n 1 152 ASP n 1 153 GLY n 1 154 GLU n 1 155 PHE n 1 156 VAL n 1 157 GLU n 1 158 VAL n 1 159 ILE n 1 160 SER n 1 161 LEU n 1 162 PRO n 1 163 LYS n 1 164 ASN n 1 165 ASP n 1 166 LEU n 1 167 LEU n 1 168 GLN n 1 169 ARG n 1 170 LEU n 1 171 ASP n 1 172 ALA n 1 173 LEU n 1 174 VAL n 1 175 ALA n 1 176 GLU n 1 177 GLU n 1 178 HIS n 1 179 LEU n 1 180 THR n 1 181 VAL n 1 182 ASP n 1 183 ALA n 1 184 ARG n 1 185 VAL n 1 186 TYR n 1 187 SER n 1 188 TYR n 1 189 ALA n 1 190 LEU n 1 191 ALA n 1 192 LEU n 1 193 LYS n 1 194 HIS n 1 195 ALA n 1 196 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUDT5, HSPC115' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NUDT5_HUMAN _struct_ref.pdbx_db_accession Q9UKK9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCI EFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVIS LPKNDLLQRLDALVAEEHLTVDARVYSYALALKHAN ; _struct_ref.pdbx_align_begin 13 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3ACA A 1 ? 196 ? Q9UKK9 13 ? 208 ? 13 208 2 1 3ACA B 1 ? 196 ? Q9UKK9 13 ? 208 ? 13 208 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8DD non-polymer . "8-oxo-7,8-dihydro-2'-deoxy-adenosine-5'-diphosphate" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3ACA _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 45.66 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.1M Sodium Citrate, 30% PEG3350, pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2009-04-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator Si _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A # _reflns.entry_id 3ACA _reflns.B_iso_Wilson_estimate 28.670 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.050 _reflns.d_resolution_low 50.0 _reflns.number_all 24799 _reflns.number_obs 24799 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 37.7 _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.09 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 97.3 _reflns_shell.Rmerge_I_obs 0.366 _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 6.3 _reflns_shell.number_unique_all 1212 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3ACA _refine.ls_d_res_high 2.050 _refine.ls_d_res_low 34.893 _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.280 _refine.ls_number_reflns_obs 24791 _refine.ls_number_reflns_all 24799 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.201 _refine.ls_R_factor_R_work 0.199 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.247 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.820 _refine.ls_number_reflns_R_free 1194 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 36.447 _refine.solvent_model_param_bsol 48.096 _refine.solvent_model_param_ksol 0.336 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.229 _refine.aniso_B[2][2] 0.850 _refine.aniso_B[3][3] -0.621 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.270 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.140 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3L85' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.813 _refine.B_iso_max 104.33 _refine.B_iso_min 10.41 _refine.occupancy_max 1.00 _refine.occupancy_min 0.36 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error 25.57 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3038 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.number_atoms_solvent 250 _refine_hist.number_atoms_total 3347 _refine_hist.d_res_high 2.050 _refine_hist.d_res_low 34.893 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 3154 0.002 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 4297 0.584 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 488 0.037 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 551 0.002 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 1179 16.366 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.050 2.126 9 96.000 2505 . 0.245 0.315 . 112 . 2617 . . 'X-RAY DIFFRACTION' 2.126 2.223 9 99.000 2577 . 0.223 0.274 . 147 . 2724 . . 'X-RAY DIFFRACTION' 2.223 2.340 9 99.000 2591 . 0.210 0.295 . 125 . 2716 . . 'X-RAY DIFFRACTION' 2.340 2.486 9 100.000 2614 . 0.215 0.277 . 145 . 2759 . . 'X-RAY DIFFRACTION' 2.486 2.678 9 100.000 2631 . 0.225 0.295 . 127 . 2758 . . 'X-RAY DIFFRACTION' 2.678 2.948 9 100.000 2626 . 0.225 0.295 . 131 . 2757 . . 'X-RAY DIFFRACTION' 2.948 3.374 9 100.000 2663 . 0.204 0.275 . 131 . 2794 . . 'X-RAY DIFFRACTION' 3.374 4.250 9 100.000 2636 . 0.171 0.210 . 150 . 2786 . . 'X-RAY DIFFRACTION' 4.250 34.898 9 100.000 2754 . 0.171 0.187 . 126 . 2880 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3ACA _struct.title 'Crystal structure of human NUDT5 complexed with 8-oxo-dADP and manganese' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3ACA _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Nudix motif, Magnesium, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 4 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 92 ? GLY A 106 ? THR A 104 GLY A 118 1 ? 15 HELX_P HELX_P2 2 ASP A 140 ? ARG A 145 ? ASP A 152 ARG A 157 1 ? 6 HELX_P HELX_P3 3 ASP A 165 ? HIS A 178 ? ASP A 177 HIS A 190 1 ? 14 HELX_P HELX_P4 4 ASP A 182 ? ASN A 196 ? ASP A 194 ASN A 208 1 ? 15 HELX_P HELX_P5 5 THR B 92 ? GLY B 106 ? THR B 104 GLY B 118 1 ? 15 HELX_P HELX_P6 6 ASP B 140 ? ALA B 144 ? ASP B 152 ALA B 156 5 ? 5 HELX_P HELX_P7 7 ASP B 165 ? GLU B 177 ? ASP B 177 GLU B 189 1 ? 13 HELX_P HELX_P8 8 ASP B 182 ? ALA B 195 ? ASP B 194 ALA B 207 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 6 ? D ? 3 ? E ? 4 ? F ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel F 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 4 ? GLU A 13 ? TYR A 16 GLU A 25 A 2 VAL A 17 ? MET A 25 ? VAL A 29 MET A 37 A 3 THR A 31 ? ARG A 39 ? THR A 43 ARG A 51 B 1 ALA A 84 ? LEU A 86 ? ALA A 96 LEU A 98 B 2 GLY A 49 ? GLN A 57 ? GLY A 61 GLN A 69 B 3 CYS A 64 ? ARG A 72 ? CYS A 76 ARG A 84 B 4 GLU A 157 ? PRO A 162 ? GLU A 169 PRO A 174 C 1 ASP A 110 ? CYS A 119 ? ASP A 122 CYS A 131 C 2 THR A 128 ? ASN A 137 ? THR A 140 ASN A 149 C 3 GLY A 49 ? GLN A 57 ? GLY A 61 GLN A 69 C 4 CYS A 64 ? ARG A 72 ? CYS A 76 ARG A 84 C 5 GLY A 77 ? GLU A 81 ? GLY A 89 GLU A 93 C 6 THR A 180 ? VAL A 181 ? THR A 192 VAL A 193 D 1 TYR B 4 ? GLU B 13 ? TYR B 16 GLU B 25 D 2 VAL B 17 ? MET B 25 ? VAL B 29 MET B 37 D 3 THR B 31 ? ARG B 39 ? THR B 43 ARG B 51 E 1 ALA B 84 ? LEU B 86 ? ALA B 96 LEU B 98 E 2 GLY B 49 ? GLN B 57 ? GLY B 61 GLN B 69 E 3 CYS B 64 ? PHE B 71 ? CYS B 76 PHE B 83 E 4 GLU B 157 ? PRO B 162 ? GLU B 169 PRO B 174 F 1 ASP B 110 ? CYS B 119 ? ASP B 122 CYS B 131 F 2 THR B 128 ? ASN B 137 ? THR B 140 ASN B 149 F 3 GLY B 49 ? GLN B 57 ? GLY B 61 GLN B 69 F 4 CYS B 64 ? PHE B 71 ? CYS B 76 PHE B 83 F 5 TYR B 78 ? GLU B 81 ? TYR B 90 GLU B 93 F 6 THR B 180 ? VAL B 181 ? THR B 192 VAL B 193 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 9 ? N GLU A 21 O LYS A 21 ? O LYS A 33 A 2 3 N THR A 22 ? N THR A 34 O TRP A 34 ? O TRP A 46 B 1 2 O GLY A 85 ? O GLY A 97 N VAL A 50 ? N VAL A 62 B 2 3 N LEU A 56 ? N LEU A 68 O CYS A 64 ? O CYS A 76 B 3 4 N LEU A 67 ? N LEU A 79 O ILE A 159 ? O ILE A 171 C 1 2 N VAL A 118 ? N VAL A 130 O ILE A 129 ? O ILE A 141 C 2 3 O VAL A 134 ? O VAL A 146 N VAL A 55 ? N VAL A 67 C 3 4 N LEU A 56 ? N LEU A 68 O CYS A 64 ? O CYS A 76 C 4 5 N ARG A 72 ? N ARG A 84 O GLY A 77 ? O GLY A 89 C 5 6 N ILE A 80 ? N ILE A 92 O THR A 180 ? O THR A 192 D 1 2 N SER B 12 ? N SER B 24 O LEU B 19 ? O LEU B 31 D 2 3 N THR B 22 ? N THR B 34 O TRP B 34 ? O TRP B 46 E 1 2 O GLY B 85 ? O GLY B 97 N VAL B 50 ? N VAL B 62 E 2 3 N LEU B 56 ? N LEU B 68 O CYS B 64 ? O CYS B 76 E 3 4 N LEU B 67 ? N LEU B 79 O ILE B 159 ? O ILE B 171 F 1 2 N VAL B 118 ? N VAL B 130 O ILE B 129 ? O ILE B 141 F 2 3 O VAL B 134 ? O VAL B 146 N VAL B 55 ? N VAL B 67 F 3 4 N LEU B 56 ? N LEU B 68 O CYS B 64 ? O CYS B 76 F 4 5 N VAL B 68 ? N VAL B 80 O GLU B 81 ? O GLU B 93 F 5 6 N ILE B 80 ? N ILE B 92 O THR B 180 ? O THR B 192 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 3 ? 6 'BINDING SITE FOR RESIDUE MN A 3' AC2 Software A MN 4 ? 6 'BINDING SITE FOR RESIDUE MN A 4' AC3 Software A MN 5 ? 3 'BINDING SITE FOR RESIDUE MN A 5' AC4 Software A 8DD 2 ? 14 'BINDING SITE FOR RESIDUE 8DD A 2' AC5 Software B MN 1 ? 6 'BINDING SITE FOR RESIDUE MN B 1' AC6 Software B MN 2 ? 8 'BINDING SITE FOR RESIDUE MN B 2' AC7 Software B 8DD 209 ? 12 'BINDING SITE FOR RESIDUE 8DD B 209' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 8DD F . ? 8DD A 2 . ? 1_555 ? 2 AC1 6 MN D . ? MN A 4 . ? 1_555 ? 3 AC1 6 ALA A 84 ? ALA A 96 . ? 1_555 ? 4 AC1 6 GLU A 104 ? GLU A 116 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 387 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH A 388 . ? 1_555 ? 7 AC2 6 8DD F . ? 8DD A 2 . ? 1_555 ? 8 AC2 6 MN C . ? MN A 3 . ? 1_555 ? 9 AC2 6 GLU A 100 ? GLU A 112 . ? 1_555 ? 10 AC2 6 GLU A 104 ? GLU A 116 . ? 1_555 ? 11 AC2 6 HOH J . ? HOH A 326 . ? 1_555 ? 12 AC2 6 HOH J . ? HOH A 340 . ? 1_555 ? 13 AC3 3 8DD F . ? 8DD A 2 . ? 1_555 ? 14 AC3 3 GLU A 100 ? GLU A 112 . ? 1_555 ? 15 AC3 3 HOH J . ? HOH A 307 . ? 1_555 ? 16 AC4 14 MN C . ? MN A 3 . ? 1_555 ? 17 AC4 14 MN D . ? MN A 4 . ? 1_555 ? 18 AC4 14 MN E . ? MN A 5 . ? 1_555 ? 19 AC4 14 TRP A 16 ? TRP A 28 . ? 1_555 ? 20 AC4 14 ARG A 39 ? ARG A 51 . ? 1_555 ? 21 AC4 14 ARG A 72 ? ARG A 84 . ? 1_555 ? 22 AC4 14 ALA A 84 ? ALA A 96 . ? 1_555 ? 23 AC4 14 GLY A 85 ? GLY A 97 . ? 1_555 ? 24 AC4 14 LEU A 86 ? LEU A 98 . ? 1_555 ? 25 AC4 14 GLU A 100 ? GLU A 112 . ? 1_555 ? 26 AC4 14 HOH J . ? HOH A 340 . ? 1_555 ? 27 AC4 14 HOH J . ? HOH A 407 . ? 1_555 ? 28 AC4 14 TRP B 34 ? TRP B 46 . ? 1_555 ? 29 AC4 14 GLU B 35 ? GLU B 47 . ? 1_555 ? 30 AC5 6 MN H . ? MN B 2 . ? 1_555 ? 31 AC5 6 ALA B 84 ? ALA B 96 . ? 1_555 ? 32 AC5 6 GLU B 104 ? GLU B 116 . ? 1_555 ? 33 AC5 6 8DD I . ? 8DD B 209 . ? 1_555 ? 34 AC5 6 HOH K . ? HOH B 518 . ? 1_555 ? 35 AC5 6 HOH K . ? HOH B 519 . ? 1_555 ? 36 AC6 8 MN G . ? MN B 1 . ? 1_555 ? 37 AC6 8 ALA B 84 ? ALA B 96 . ? 1_555 ? 38 AC6 8 GLU B 100 ? GLU B 112 . ? 1_555 ? 39 AC6 8 GLU B 104 ? GLU B 116 . ? 1_555 ? 40 AC6 8 GLU B 154 ? GLU B 166 . ? 1_555 ? 41 AC6 8 8DD I . ? 8DD B 209 . ? 1_555 ? 42 AC6 8 HOH K . ? HOH B 452 . ? 1_555 ? 43 AC6 8 HOH K . ? HOH B 491 . ? 1_555 ? 44 AC7 12 THR A 33 ? THR A 45 . ? 1_555 ? 45 AC7 12 TRP A 34 ? TRP A 46 . ? 1_555 ? 46 AC7 12 GLU A 35 ? GLU A 47 . ? 1_555 ? 47 AC7 12 MN G . ? MN B 1 . ? 1_555 ? 48 AC7 12 MN H . ? MN B 2 . ? 1_555 ? 49 AC7 12 TRP B 16 ? TRP B 28 . ? 1_555 ? 50 AC7 12 ARG B 39 ? ARG B 51 . ? 1_555 ? 51 AC7 12 ARG B 72 ? ARG B 84 . ? 1_555 ? 52 AC7 12 ALA B 84 ? ALA B 96 . ? 1_555 ? 53 AC7 12 LEU B 86 ? LEU B 98 . ? 1_555 ? 54 AC7 12 GLU B 154 ? GLU B 166 . ? 1_555 ? 55 AC7 12 HOH K . ? HOH B 491 . ? 1_555 ? # _atom_sites.entry_id 3ACA _atom_sites.fract_transf_matrix[1][1] 0.008800 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005422 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024569 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011771 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 13 13 GLY GLY A . n A 1 2 LYS 2 14 14 LYS LYS A . n A 1 3 GLN 3 15 15 GLN GLN A . n A 1 4 TYR 4 16 16 TYR TYR A . n A 1 5 ILE 5 17 17 ILE ILE A . n A 1 6 ILE 6 18 18 ILE ILE A . n A 1 7 SER 7 19 19 SER SER A . n A 1 8 GLU 8 20 20 GLU GLU A . n A 1 9 GLU 9 21 21 GLU GLU A . n A 1 10 LEU 10 22 22 LEU LEU A . n A 1 11 ILE 11 23 23 ILE ILE A . n A 1 12 SER 12 24 24 SER SER A . n A 1 13 GLU 13 25 25 GLU GLU A . n A 1 14 GLY 14 26 26 GLY GLY A . n A 1 15 LYS 15 27 27 LYS LYS A . n A 1 16 TRP 16 28 28 TRP TRP A . n A 1 17 VAL 17 29 29 VAL VAL A . n A 1 18 LYS 18 30 30 LYS LYS A . n A 1 19 LEU 19 31 31 LEU LEU A . n A 1 20 GLU 20 32 32 GLU GLU A . n A 1 21 LYS 21 33 33 LYS LYS A . n A 1 22 THR 22 34 34 THR THR A . n A 1 23 THR 23 35 35 THR THR A . n A 1 24 TYR 24 36 36 TYR TYR A . n A 1 25 MET 25 37 37 MET MET A . n A 1 26 ASP 26 38 38 ASP ASP A . n A 1 27 PRO 27 39 39 PRO PRO A . n A 1 28 THR 28 40 40 THR THR A . n A 1 29 GLY 29 41 41 GLY GLY A . n A 1 30 LYS 30 42 42 LYS LYS A . n A 1 31 THR 31 43 43 THR THR A . n A 1 32 ARG 32 44 44 ARG ARG A . n A 1 33 THR 33 45 45 THR THR A . n A 1 34 TRP 34 46 46 TRP TRP A . n A 1 35 GLU 35 47 47 GLU GLU A . n A 1 36 SER 36 48 48 SER SER A . n A 1 37 VAL 37 49 49 VAL VAL A . n A 1 38 LYS 38 50 50 LYS LYS A . n A 1 39 ARG 39 51 51 ARG ARG A . n A 1 40 THR 40 52 52 THR THR A . n A 1 41 THR 41 53 53 THR THR A . n A 1 42 ARG 42 54 54 ARG ARG A . n A 1 43 LYS 43 55 55 LYS LYS A . n A 1 44 GLU 44 56 56 GLU GLU A . n A 1 45 GLN 45 57 57 GLN GLN A . n A 1 46 THR 46 58 58 THR THR A . n A 1 47 ALA 47 59 59 ALA ALA A . n A 1 48 ASP 48 60 60 ASP ASP A . n A 1 49 GLY 49 61 61 GLY GLY A . n A 1 50 VAL 50 62 62 VAL VAL A . n A 1 51 ALA 51 63 63 ALA ALA A . n A 1 52 VAL 52 64 64 VAL VAL A . n A 1 53 ILE 53 65 65 ILE ILE A . n A 1 54 PRO 54 66 66 PRO PRO A . n A 1 55 VAL 55 67 67 VAL VAL A . n A 1 56 LEU 56 68 68 LEU LEU A . n A 1 57 GLN 57 69 69 GLN GLN A . n A 1 58 ARG 58 70 70 ARG ARG A . n A 1 59 THR 59 71 71 THR THR A . n A 1 60 LEU 60 72 72 LEU LEU A . n A 1 61 HIS 61 73 73 HIS HIS A . n A 1 62 TYR 62 74 74 TYR TYR A . n A 1 63 GLU 63 75 75 GLU GLU A . n A 1 64 CYS 64 76 76 CYS CYS A . n A 1 65 ILE 65 77 77 ILE ILE A . n A 1 66 VAL 66 78 78 VAL VAL A . n A 1 67 LEU 67 79 79 LEU LEU A . n A 1 68 VAL 68 80 80 VAL VAL A . n A 1 69 LYS 69 81 81 LYS LYS A . n A 1 70 GLN 70 82 82 GLN GLN A . n A 1 71 PHE 71 83 83 PHE PHE A . n A 1 72 ARG 72 84 84 ARG ARG A . n A 1 73 PRO 73 85 85 PRO PRO A . n A 1 74 PRO 74 86 86 PRO PRO A . n A 1 75 MET 75 87 87 MET MET A . n A 1 76 GLY 76 88 88 GLY GLY A . n A 1 77 GLY 77 89 89 GLY GLY A . n A 1 78 TYR 78 90 90 TYR TYR A . n A 1 79 CYS 79 91 91 CYS CYS A . n A 1 80 ILE 80 92 92 ILE ILE A . n A 1 81 GLU 81 93 93 GLU GLU A . n A 1 82 PHE 82 94 94 PHE PHE A . n A 1 83 PRO 83 95 95 PRO PRO A . n A 1 84 ALA 84 96 96 ALA ALA A . n A 1 85 GLY 85 97 97 GLY GLY A . n A 1 86 LEU 86 98 98 LEU LEU A . n A 1 87 ILE 87 99 99 ILE ILE A . n A 1 88 ASP 88 100 100 ASP ASP A . n A 1 89 ASP 89 101 101 ASP ASP A . n A 1 90 GLY 90 102 102 GLY GLY A . n A 1 91 GLU 91 103 103 GLU GLU A . n A 1 92 THR 92 104 104 THR THR A . n A 1 93 PRO 93 105 105 PRO PRO A . n A 1 94 GLU 94 106 106 GLU GLU A . n A 1 95 ALA 95 107 107 ALA ALA A . n A 1 96 ALA 96 108 108 ALA ALA A . n A 1 97 ALA 97 109 109 ALA ALA A . n A 1 98 LEU 98 110 110 LEU LEU A . n A 1 99 ARG 99 111 111 ARG ARG A . n A 1 100 GLU 100 112 112 GLU GLU A . n A 1 101 LEU 101 113 113 LEU LEU A . n A 1 102 GLU 102 114 114 GLU GLU A . n A 1 103 GLU 103 115 115 GLU GLU A . n A 1 104 GLU 104 116 116 GLU GLU A . n A 1 105 THR 105 117 117 THR THR A . n A 1 106 GLY 106 118 118 GLY GLY A . n A 1 107 TYR 107 119 119 TYR TYR A . n A 1 108 LYS 108 120 120 LYS LYS A . n A 1 109 GLY 109 121 121 GLY GLY A . n A 1 110 ASP 110 122 122 ASP ASP A . n A 1 111 ILE 111 123 123 ILE ILE A . n A 1 112 ALA 112 124 124 ALA ALA A . n A 1 113 GLU 113 125 125 GLU GLU A . n A 1 114 CYS 114 126 126 CYS CYS A . n A 1 115 SER 115 127 127 SER SER A . n A 1 116 PRO 116 128 128 PRO PRO A . n A 1 117 ALA 117 129 129 ALA ALA A . n A 1 118 VAL 118 130 130 VAL VAL A . n A 1 119 CYS 119 131 131 CYS CYS A . n A 1 120 MET 120 132 132 MET MET A . n A 1 121 ASP 121 133 133 ASP ASP A . n A 1 122 PRO 122 134 134 PRO PRO A . n A 1 123 GLY 123 135 135 GLY GLY A . n A 1 124 LEU 124 136 136 LEU LEU A . n A 1 125 SER 125 137 137 SER SER A . n A 1 126 ASN 126 138 138 ASN ASN A . n A 1 127 CYS 127 139 139 CYS CYS A . n A 1 128 THR 128 140 140 THR THR A . n A 1 129 ILE 129 141 141 ILE ILE A . n A 1 130 HIS 130 142 142 HIS HIS A . n A 1 131 ILE 131 143 143 ILE ILE A . n A 1 132 VAL 132 144 144 VAL VAL A . n A 1 133 THR 133 145 145 THR THR A . n A 1 134 VAL 134 146 146 VAL VAL A . n A 1 135 THR 135 147 147 THR THR A . n A 1 136 ILE 136 148 148 ILE ILE A . n A 1 137 ASN 137 149 149 ASN ASN A . n A 1 138 GLY 138 150 150 GLY GLY A . n A 1 139 ASP 139 151 151 ASP ASP A . n A 1 140 ASP 140 152 152 ASP ASP A . n A 1 141 ALA 141 153 153 ALA ALA A . n A 1 142 GLU 142 154 154 GLU GLU A . n A 1 143 ASN 143 155 155 ASN ASN A . n A 1 144 ALA 144 156 156 ALA ALA A . n A 1 145 ARG 145 157 157 ARG ARG A . n A 1 146 PRO 146 158 158 PRO PRO A . n A 1 147 LYS 147 159 159 LYS LYS A . n A 1 148 PRO 148 160 160 PRO PRO A . n A 1 149 LYS 149 161 161 LYS LYS A . n A 1 150 PRO 150 162 162 PRO PRO A . n A 1 151 GLY 151 163 163 GLY GLY A . n A 1 152 ASP 152 164 164 ASP ASP A . n A 1 153 GLY 153 165 165 GLY GLY A . n A 1 154 GLU 154 166 166 GLU GLU A . n A 1 155 PHE 155 167 167 PHE PHE A . n A 1 156 VAL 156 168 168 VAL VAL A . n A 1 157 GLU 157 169 169 GLU GLU A . n A 1 158 VAL 158 170 170 VAL VAL A . n A 1 159 ILE 159 171 171 ILE ILE A . n A 1 160 SER 160 172 172 SER SER A . n A 1 161 LEU 161 173 173 LEU LEU A . n A 1 162 PRO 162 174 174 PRO PRO A . n A 1 163 LYS 163 175 175 LYS LYS A . n A 1 164 ASN 164 176 176 ASN ASN A . n A 1 165 ASP 165 177 177 ASP ASP A . n A 1 166 LEU 166 178 178 LEU LEU A . n A 1 167 LEU 167 179 179 LEU LEU A . n A 1 168 GLN 168 180 180 GLN GLN A . n A 1 169 ARG 169 181 181 ARG ARG A . n A 1 170 LEU 170 182 182 LEU LEU A . n A 1 171 ASP 171 183 183 ASP ASP A . n A 1 172 ALA 172 184 184 ALA ALA A . n A 1 173 LEU 173 185 185 LEU LEU A . n A 1 174 VAL 174 186 186 VAL VAL A . n A 1 175 ALA 175 187 187 ALA ALA A . n A 1 176 GLU 176 188 188 GLU GLU A . n A 1 177 GLU 177 189 189 GLU GLU A . n A 1 178 HIS 178 190 190 HIS HIS A . n A 1 179 LEU 179 191 191 LEU LEU A . n A 1 180 THR 180 192 192 THR THR A . n A 1 181 VAL 181 193 193 VAL VAL A . n A 1 182 ASP 182 194 194 ASP ASP A . n A 1 183 ALA 183 195 195 ALA ALA A . n A 1 184 ARG 184 196 196 ARG ARG A . n A 1 185 VAL 185 197 197 VAL VAL A . n A 1 186 TYR 186 198 198 TYR TYR A . n A 1 187 SER 187 199 199 SER SER A . n A 1 188 TYR 188 200 200 TYR TYR A . n A 1 189 ALA 189 201 201 ALA ALA A . n A 1 190 LEU 190 202 202 LEU LEU A . n A 1 191 ALA 191 203 203 ALA ALA A . n A 1 192 LEU 192 204 204 LEU LEU A . n A 1 193 LYS 193 205 205 LYS LYS A . n A 1 194 HIS 194 206 206 HIS HIS A . n A 1 195 ALA 195 207 207 ALA ALA A . n A 1 196 ASN 196 208 208 ASN ASN A . n B 1 1 GLY 1 13 ? ? ? B . n B 1 2 LYS 2 14 14 LYS LYS B . n B 1 3 GLN 3 15 15 GLN GLN B . n B 1 4 TYR 4 16 16 TYR TYR B . n B 1 5 ILE 5 17 17 ILE ILE B . n B 1 6 ILE 6 18 18 ILE ILE B . n B 1 7 SER 7 19 19 SER SER B . n B 1 8 GLU 8 20 20 GLU GLU B . n B 1 9 GLU 9 21 21 GLU GLU B . n B 1 10 LEU 10 22 22 LEU LEU B . n B 1 11 ILE 11 23 23 ILE ILE B . n B 1 12 SER 12 24 24 SER SER B . n B 1 13 GLU 13 25 25 GLU GLU B . n B 1 14 GLY 14 26 26 GLY GLY B . n B 1 15 LYS 15 27 27 LYS LYS B . n B 1 16 TRP 16 28 28 TRP TRP B . n B 1 17 VAL 17 29 29 VAL VAL B . n B 1 18 LYS 18 30 30 LYS LYS B . n B 1 19 LEU 19 31 31 LEU LEU B . n B 1 20 GLU 20 32 32 GLU GLU B . n B 1 21 LYS 21 33 33 LYS LYS B . n B 1 22 THR 22 34 34 THR THR B . n B 1 23 THR 23 35 35 THR THR B . n B 1 24 TYR 24 36 36 TYR TYR B . n B 1 25 MET 25 37 37 MET MET B . n B 1 26 ASP 26 38 38 ASP ASP B . n B 1 27 PRO 27 39 39 PRO PRO B . n B 1 28 THR 28 40 40 THR THR B . n B 1 29 GLY 29 41 41 GLY GLY B . n B 1 30 LYS 30 42 42 LYS LYS B . n B 1 31 THR 31 43 43 THR THR B . n B 1 32 ARG 32 44 44 ARG ARG B . n B 1 33 THR 33 45 45 THR THR B . n B 1 34 TRP 34 46 46 TRP TRP B . n B 1 35 GLU 35 47 47 GLU GLU B . n B 1 36 SER 36 48 48 SER SER B . n B 1 37 VAL 37 49 49 VAL VAL B . n B 1 38 LYS 38 50 50 LYS LYS B . n B 1 39 ARG 39 51 51 ARG ARG B . n B 1 40 THR 40 52 52 THR THR B . n B 1 41 THR 41 53 53 THR THR B . n B 1 42 ARG 42 54 54 ARG ARG B . n B 1 43 LYS 43 55 55 LYS LYS B . n B 1 44 GLU 44 56 56 GLU GLU B . n B 1 45 GLN 45 57 57 GLN GLN B . n B 1 46 THR 46 58 58 THR THR B . n B 1 47 ALA 47 59 59 ALA ALA B . n B 1 48 ASP 48 60 60 ASP ASP B . n B 1 49 GLY 49 61 61 GLY GLY B . n B 1 50 VAL 50 62 62 VAL VAL B . n B 1 51 ALA 51 63 63 ALA ALA B . n B 1 52 VAL 52 64 64 VAL VAL B . n B 1 53 ILE 53 65 65 ILE ILE B . n B 1 54 PRO 54 66 66 PRO PRO B . n B 1 55 VAL 55 67 67 VAL VAL B . n B 1 56 LEU 56 68 68 LEU LEU B . n B 1 57 GLN 57 69 69 GLN GLN B . n B 1 58 ARG 58 70 70 ARG ARG B . n B 1 59 THR 59 71 71 THR THR B . n B 1 60 LEU 60 72 72 LEU LEU B . n B 1 61 HIS 61 73 73 HIS HIS B . n B 1 62 TYR 62 74 74 TYR TYR B . n B 1 63 GLU 63 75 75 GLU GLU B . n B 1 64 CYS 64 76 76 CYS CYS B . n B 1 65 ILE 65 77 77 ILE ILE B . n B 1 66 VAL 66 78 78 VAL VAL B . n B 1 67 LEU 67 79 79 LEU LEU B . n B 1 68 VAL 68 80 80 VAL VAL B . n B 1 69 LYS 69 81 81 LYS LYS B . n B 1 70 GLN 70 82 82 GLN GLN B . n B 1 71 PHE 71 83 83 PHE PHE B . n B 1 72 ARG 72 84 84 ARG ARG B . n B 1 73 PRO 73 85 85 PRO PRO B . n B 1 74 PRO 74 86 86 PRO PRO B . n B 1 75 MET 75 87 87 MET MET B . n B 1 76 GLY 76 88 88 GLY GLY B . n B 1 77 GLY 77 89 89 GLY GLY B . n B 1 78 TYR 78 90 90 TYR TYR B . n B 1 79 CYS 79 91 91 CYS CYS B . n B 1 80 ILE 80 92 92 ILE ILE B . n B 1 81 GLU 81 93 93 GLU GLU B . n B 1 82 PHE 82 94 94 PHE PHE B . n B 1 83 PRO 83 95 95 PRO PRO B . n B 1 84 ALA 84 96 96 ALA ALA B . n B 1 85 GLY 85 97 97 GLY GLY B . n B 1 86 LEU 86 98 98 LEU LEU B . n B 1 87 ILE 87 99 99 ILE ILE B . n B 1 88 ASP 88 100 100 ASP ASP B . n B 1 89 ASP 89 101 101 ASP ASP B . n B 1 90 GLY 90 102 102 GLY GLY B . n B 1 91 GLU 91 103 103 GLU GLU B . n B 1 92 THR 92 104 104 THR THR B . n B 1 93 PRO 93 105 105 PRO PRO B . n B 1 94 GLU 94 106 106 GLU GLU B . n B 1 95 ALA 95 107 107 ALA ALA B . n B 1 96 ALA 96 108 108 ALA ALA B . n B 1 97 ALA 97 109 109 ALA ALA B . n B 1 98 LEU 98 110 110 LEU LEU B . n B 1 99 ARG 99 111 111 ARG ARG B . n B 1 100 GLU 100 112 112 GLU GLU B . n B 1 101 LEU 101 113 113 LEU LEU B . n B 1 102 GLU 102 114 114 GLU GLU B . n B 1 103 GLU 103 115 115 GLU GLU B . n B 1 104 GLU 104 116 116 GLU GLU B . n B 1 105 THR 105 117 117 THR THR B . n B 1 106 GLY 106 118 118 GLY GLY B . n B 1 107 TYR 107 119 119 TYR TYR B . n B 1 108 LYS 108 120 120 LYS LYS B . n B 1 109 GLY 109 121 121 GLY GLY B . n B 1 110 ASP 110 122 122 ASP ASP B . n B 1 111 ILE 111 123 123 ILE ILE B . n B 1 112 ALA 112 124 124 ALA ALA B . n B 1 113 GLU 113 125 125 GLU GLU B . n B 1 114 CYS 114 126 126 CYS CYS B . n B 1 115 SER 115 127 127 SER SER B . n B 1 116 PRO 116 128 128 PRO PRO B . n B 1 117 ALA 117 129 129 ALA ALA B . n B 1 118 VAL 118 130 130 VAL VAL B . n B 1 119 CYS 119 131 131 CYS CYS B . n B 1 120 MET 120 132 132 MET MET B . n B 1 121 ASP 121 133 133 ASP ASP B . n B 1 122 PRO 122 134 134 PRO PRO B . n B 1 123 GLY 123 135 135 GLY GLY B . n B 1 124 LEU 124 136 136 LEU LEU B . n B 1 125 SER 125 137 137 SER SER B . n B 1 126 ASN 126 138 138 ASN ASN B . n B 1 127 CYS 127 139 139 CYS CYS B . n B 1 128 THR 128 140 140 THR THR B . n B 1 129 ILE 129 141 141 ILE ILE B . n B 1 130 HIS 130 142 142 HIS HIS B . n B 1 131 ILE 131 143 143 ILE ILE B . n B 1 132 VAL 132 144 144 VAL VAL B . n B 1 133 THR 133 145 145 THR THR B . n B 1 134 VAL 134 146 146 VAL VAL B . n B 1 135 THR 135 147 147 THR THR B . n B 1 136 ILE 136 148 148 ILE ILE B . n B 1 137 ASN 137 149 149 ASN ASN B . n B 1 138 GLY 138 150 150 GLY GLY B . n B 1 139 ASP 139 151 151 ASP ASP B . n B 1 140 ASP 140 152 152 ASP ASP B . n B 1 141 ALA 141 153 153 ALA ALA B . n B 1 142 GLU 142 154 154 GLU GLU B . n B 1 143 ASN 143 155 155 ASN ASN B . n B 1 144 ALA 144 156 156 ALA ALA B . n B 1 145 ARG 145 157 157 ARG ARG B . n B 1 146 PRO 146 158 158 PRO PRO B . n B 1 147 LYS 147 159 159 LYS LYS B . n B 1 148 PRO 148 160 160 PRO PRO B . n B 1 149 LYS 149 161 161 LYS LYS B . n B 1 150 PRO 150 162 162 PRO PRO B . n B 1 151 GLY 151 163 163 GLY GLY B . n B 1 152 ASP 152 164 164 ASP ASP B . n B 1 153 GLY 153 165 165 GLY GLY B . n B 1 154 GLU 154 166 166 GLU GLU B . n B 1 155 PHE 155 167 167 PHE PHE B . n B 1 156 VAL 156 168 168 VAL VAL B . n B 1 157 GLU 157 169 169 GLU GLU B . n B 1 158 VAL 158 170 170 VAL VAL B . n B 1 159 ILE 159 171 171 ILE ILE B . n B 1 160 SER 160 172 172 SER SER B . n B 1 161 LEU 161 173 173 LEU LEU B . n B 1 162 PRO 162 174 174 PRO PRO B . n B 1 163 LYS 163 175 175 LYS LYS B . n B 1 164 ASN 164 176 176 ASN ASN B . n B 1 165 ASP 165 177 177 ASP ASP B . n B 1 166 LEU 166 178 178 LEU LEU B . n B 1 167 LEU 167 179 179 LEU LEU B . n B 1 168 GLN 168 180 180 GLN GLN B . n B 1 169 ARG 169 181 181 ARG ARG B . n B 1 170 LEU 170 182 182 LEU LEU B . n B 1 171 ASP 171 183 183 ASP ASP B . n B 1 172 ALA 172 184 184 ALA ALA B . n B 1 173 LEU 173 185 185 LEU LEU B . n B 1 174 VAL 174 186 186 VAL VAL B . n B 1 175 ALA 175 187 187 ALA ALA B . n B 1 176 GLU 176 188 188 GLU GLU B . n B 1 177 GLU 177 189 189 GLU GLU B . n B 1 178 HIS 178 190 190 HIS HIS B . n B 1 179 LEU 179 191 191 LEU LEU B . n B 1 180 THR 180 192 192 THR THR B . n B 1 181 VAL 181 193 193 VAL VAL B . n B 1 182 ASP 182 194 194 ASP ASP B . n B 1 183 ALA 183 195 195 ALA ALA B . n B 1 184 ARG 184 196 196 ARG ARG B . n B 1 185 VAL 185 197 197 VAL VAL B . n B 1 186 TYR 186 198 198 TYR TYR B . n B 1 187 SER 187 199 199 SER SER B . n B 1 188 TYR 188 200 200 TYR TYR B . n B 1 189 ALA 189 201 201 ALA ALA B . n B 1 190 LEU 190 202 202 LEU LEU B . n B 1 191 ALA 191 203 203 ALA ALA B . n B 1 192 LEU 192 204 204 LEU LEU B . n B 1 193 LYS 193 205 205 LYS LYS B . n B 1 194 HIS 194 206 206 HIS HIS B . n B 1 195 ALA 195 207 207 ALA ALA B . n B 1 196 ASN 196 208 208 ASN ASN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN 1 3 3 MN MN A . D 2 MN 1 4 4 MN MN A . E 2 MN 1 5 5 MN MN A . F 3 8DD 1 2 2 8DD 8DD A . G 2 MN 1 1 1 MN MN B . H 2 MN 1 2 2 MN MN B . I 3 8DD 1 209 209 8DD 8DD B . J 4 HOH 1 300 300 HOH HOH A . J 4 HOH 2 301 301 HOH HOH A . J 4 HOH 3 302 302 HOH HOH A . J 4 HOH 4 303 303 HOH HOH A . J 4 HOH 5 304 304 HOH HOH A . J 4 HOH 6 305 305 HOH HOH A . J 4 HOH 7 306 306 HOH HOH A . J 4 HOH 8 307 307 HOH HOH A . J 4 HOH 9 308 308 HOH HOH A . J 4 HOH 10 309 309 HOH HOH A . J 4 HOH 11 310 310 HOH HOH A . J 4 HOH 12 311 311 HOH HOH A . J 4 HOH 13 312 312 HOH HOH A . J 4 HOH 14 313 313 HOH HOH A . J 4 HOH 15 314 314 HOH HOH A . J 4 HOH 16 315 315 HOH HOH A . J 4 HOH 17 316 316 HOH HOH A . J 4 HOH 18 317 317 HOH HOH A . J 4 HOH 19 318 318 HOH HOH A . J 4 HOH 20 319 319 HOH HOH A . J 4 HOH 21 320 320 HOH HOH A . J 4 HOH 22 321 321 HOH HOH A . J 4 HOH 23 322 322 HOH HOH A . J 4 HOH 24 323 323 HOH HOH A . J 4 HOH 25 324 324 HOH HOH A . J 4 HOH 26 325 325 HOH HOH A . J 4 HOH 27 326 326 HOH HOH A . J 4 HOH 28 327 327 HOH HOH A . J 4 HOH 29 328 328 HOH HOH A . J 4 HOH 30 329 329 HOH HOH A . J 4 HOH 31 330 330 HOH HOH A . J 4 HOH 32 331 331 HOH HOH A . J 4 HOH 33 332 332 HOH HOH A . J 4 HOH 34 333 333 HOH HOH A . J 4 HOH 35 334 334 HOH HOH A . J 4 HOH 36 335 335 HOH HOH A . J 4 HOH 37 336 336 HOH HOH A . J 4 HOH 38 337 337 HOH HOH A . J 4 HOH 39 338 338 HOH HOH A . J 4 HOH 40 339 339 HOH HOH A . J 4 HOH 41 340 340 HOH HOH A . J 4 HOH 42 341 341 HOH HOH A . J 4 HOH 43 342 342 HOH HOH A . J 4 HOH 44 343 343 HOH HOH A . J 4 HOH 45 344 344 HOH HOH A . J 4 HOH 46 345 345 HOH HOH A . J 4 HOH 47 346 346 HOH HOH A . J 4 HOH 48 347 347 HOH HOH A . J 4 HOH 49 348 348 HOH HOH A . J 4 HOH 50 349 349 HOH HOH A . J 4 HOH 51 350 350 HOH HOH A . J 4 HOH 52 351 351 HOH HOH A . J 4 HOH 53 352 352 HOH HOH A . J 4 HOH 54 353 353 HOH HOH A . J 4 HOH 55 354 354 HOH HOH A . J 4 HOH 56 355 355 HOH HOH A . J 4 HOH 57 356 356 HOH HOH A . J 4 HOH 58 357 357 HOH HOH A . J 4 HOH 59 358 358 HOH HOH A . J 4 HOH 60 359 359 HOH HOH A . J 4 HOH 61 360 360 HOH HOH A . J 4 HOH 62 361 361 HOH HOH A . J 4 HOH 63 362 362 HOH HOH A . J 4 HOH 64 363 363 HOH HOH A . J 4 HOH 65 364 364 HOH HOH A . J 4 HOH 66 365 365 HOH HOH A . J 4 HOH 67 366 366 HOH HOH A . J 4 HOH 68 367 367 HOH HOH A . J 4 HOH 69 368 368 HOH HOH A . J 4 HOH 70 369 369 HOH HOH A . J 4 HOH 71 370 370 HOH HOH A . J 4 HOH 72 371 371 HOH HOH A . J 4 HOH 73 372 372 HOH HOH A . J 4 HOH 74 373 373 HOH HOH A . J 4 HOH 75 374 374 HOH HOH A . J 4 HOH 76 375 375 HOH HOH A . J 4 HOH 77 376 376 HOH HOH A . J 4 HOH 78 377 377 HOH HOH A . J 4 HOH 79 378 378 HOH HOH A . J 4 HOH 80 379 379 HOH HOH A . J 4 HOH 81 380 380 HOH HOH A . J 4 HOH 82 381 381 HOH HOH A . J 4 HOH 83 382 382 HOH HOH A . J 4 HOH 84 383 383 HOH HOH A . J 4 HOH 85 384 384 HOH HOH A . J 4 HOH 86 385 385 HOH HOH A . J 4 HOH 87 386 386 HOH HOH A . J 4 HOH 88 387 387 HOH HOH A . J 4 HOH 89 388 388 HOH HOH A . J 4 HOH 90 389 389 HOH HOH A . J 4 HOH 91 390 390 HOH HOH A . J 4 HOH 92 391 391 HOH HOH A . J 4 HOH 93 392 392 HOH HOH A . J 4 HOH 94 393 393 HOH HOH A . J 4 HOH 95 394 394 HOH HOH A . J 4 HOH 96 395 395 HOH HOH A . J 4 HOH 97 396 396 HOH HOH A . J 4 HOH 98 397 397 HOH HOH A . J 4 HOH 99 398 398 HOH HOH A . J 4 HOH 100 399 399 HOH HOH A . J 4 HOH 101 400 400 HOH HOH A . J 4 HOH 102 401 401 HOH HOH A . J 4 HOH 103 402 402 HOH HOH A . J 4 HOH 104 403 403 HOH HOH A . J 4 HOH 105 404 404 HOH HOH A . J 4 HOH 106 405 405 HOH HOH A . J 4 HOH 107 406 406 HOH HOH A . J 4 HOH 108 407 407 HOH HOH A . J 4 HOH 109 408 408 HOH HOH A . J 4 HOH 110 409 409 HOH HOH A . K 4 HOH 1 410 410 HOH HOH B . K 4 HOH 2 411 411 HOH HOH B . K 4 HOH 3 412 412 HOH HOH B . K 4 HOH 4 413 413 HOH HOH B . K 4 HOH 5 414 414 HOH HOH B . K 4 HOH 6 415 415 HOH HOH B . K 4 HOH 7 416 416 HOH HOH B . K 4 HOH 8 417 417 HOH HOH B . K 4 HOH 9 418 418 HOH HOH B . K 4 HOH 10 419 419 HOH HOH B . K 4 HOH 11 420 420 HOH HOH B . K 4 HOH 12 421 421 HOH HOH B . K 4 HOH 13 422 422 HOH HOH B . K 4 HOH 14 423 423 HOH HOH B . K 4 HOH 15 424 424 HOH HOH B . K 4 HOH 16 425 425 HOH HOH B . K 4 HOH 17 426 426 HOH HOH B . K 4 HOH 18 427 427 HOH HOH B . K 4 HOH 19 428 428 HOH HOH B . K 4 HOH 20 429 429 HOH HOH B . K 4 HOH 21 430 430 HOH HOH B . K 4 HOH 22 431 431 HOH HOH B . K 4 HOH 23 432 432 HOH HOH B . K 4 HOH 24 433 433 HOH HOH B . K 4 HOH 25 434 434 HOH HOH B . K 4 HOH 26 435 435 HOH HOH B . K 4 HOH 27 436 436 HOH HOH B . K 4 HOH 28 437 437 HOH HOH B . K 4 HOH 29 438 438 HOH HOH B . K 4 HOH 30 439 439 HOH HOH B . K 4 HOH 31 440 440 HOH HOH B . K 4 HOH 32 441 441 HOH HOH B . K 4 HOH 33 442 442 HOH HOH B . K 4 HOH 34 443 443 HOH HOH B . K 4 HOH 35 444 444 HOH HOH B . K 4 HOH 36 445 445 HOH HOH B . K 4 HOH 37 446 446 HOH HOH B . K 4 HOH 38 447 447 HOH HOH B . K 4 HOH 39 448 448 HOH HOH B . K 4 HOH 40 449 449 HOH HOH B . K 4 HOH 41 450 450 HOH HOH B . K 4 HOH 42 451 451 HOH HOH B . K 4 HOH 43 452 452 HOH HOH B . K 4 HOH 44 453 453 HOH HOH B . K 4 HOH 45 454 454 HOH HOH B . K 4 HOH 46 455 455 HOH HOH B . K 4 HOH 47 456 456 HOH HOH B . K 4 HOH 48 457 457 HOH HOH B . K 4 HOH 49 458 458 HOH HOH B . K 4 HOH 50 459 459 HOH HOH B . K 4 HOH 51 460 460 HOH HOH B . K 4 HOH 52 461 461 HOH HOH B . K 4 HOH 53 462 462 HOH HOH B . K 4 HOH 54 463 463 HOH HOH B . K 4 HOH 55 464 464 HOH HOH B . K 4 HOH 56 465 465 HOH HOH B . K 4 HOH 57 466 466 HOH HOH B . K 4 HOH 58 467 467 HOH HOH B . K 4 HOH 59 468 468 HOH HOH B . K 4 HOH 60 469 469 HOH HOH B . K 4 HOH 61 470 470 HOH HOH B . K 4 HOH 62 471 471 HOH HOH B . K 4 HOH 63 472 472 HOH HOH B . K 4 HOH 64 473 473 HOH HOH B . K 4 HOH 65 474 474 HOH HOH B . K 4 HOH 66 475 475 HOH HOH B . K 4 HOH 67 476 476 HOH HOH B . K 4 HOH 68 477 477 HOH HOH B . K 4 HOH 69 478 478 HOH HOH B . K 4 HOH 70 479 479 HOH HOH B . K 4 HOH 71 480 480 HOH HOH B . K 4 HOH 72 481 481 HOH HOH B . K 4 HOH 73 482 482 HOH HOH B . K 4 HOH 74 483 483 HOH HOH B . K 4 HOH 75 484 484 HOH HOH B . K 4 HOH 76 485 485 HOH HOH B . K 4 HOH 77 486 486 HOH HOH B . K 4 HOH 78 487 487 HOH HOH B . K 4 HOH 79 488 488 HOH HOH B . K 4 HOH 80 489 489 HOH HOH B . K 4 HOH 81 490 490 HOH HOH B . K 4 HOH 82 491 491 HOH HOH B . K 4 HOH 83 492 492 HOH HOH B . K 4 HOH 84 493 493 HOH HOH B . K 4 HOH 85 494 494 HOH HOH B . K 4 HOH 86 495 495 HOH HOH B . K 4 HOH 87 496 496 HOH HOH B . K 4 HOH 88 497 497 HOH HOH B . K 4 HOH 89 498 498 HOH HOH B . K 4 HOH 90 499 499 HOH HOH B . K 4 HOH 91 500 500 HOH HOH B . K 4 HOH 92 501 501 HOH HOH B . K 4 HOH 93 502 502 HOH HOH B . K 4 HOH 94 503 503 HOH HOH B . K 4 HOH 95 504 504 HOH HOH B . K 4 HOH 96 505 505 HOH HOH B . K 4 HOH 97 506 506 HOH HOH B . K 4 HOH 98 507 507 HOH HOH B . K 4 HOH 99 508 508 HOH HOH B . K 4 HOH 100 509 509 HOH HOH B . K 4 HOH 101 510 510 HOH HOH B . K 4 HOH 102 511 511 HOH HOH B . K 4 HOH 103 512 512 HOH HOH B . K 4 HOH 104 513 513 HOH HOH B . K 4 HOH 105 514 514 HOH HOH B . K 4 HOH 106 515 515 HOH HOH B . K 4 HOH 107 516 516 HOH HOH B . K 4 HOH 108 517 517 HOH HOH B . K 4 HOH 109 518 518 HOH HOH B . K 4 HOH 110 519 519 HOH HOH B . K 4 HOH 111 520 520 HOH HOH B . K 4 HOH 112 521 521 HOH HOH B . K 4 HOH 113 522 522 HOH HOH B . K 4 HOH 114 523 523 HOH HOH B . K 4 HOH 115 524 524 HOH HOH B . K 4 HOH 116 525 525 HOH HOH B . K 4 HOH 117 526 526 HOH HOH B . K 4 HOH 118 527 527 HOH HOH B . K 4 HOH 119 528 528 HOH HOH B . K 4 HOH 120 529 529 HOH HOH B . K 4 HOH 121 530 530 HOH HOH B . K 4 HOH 122 531 531 HOH HOH B . K 4 HOH 123 532 532 HOH HOH B . K 4 HOH 124 533 533 HOH HOH B . K 4 HOH 125 534 534 HOH HOH B . K 4 HOH 126 535 535 HOH HOH B . K 4 HOH 127 536 536 HOH HOH B . K 4 HOH 128 537 537 HOH HOH B . K 4 HOH 129 538 538 HOH HOH B . K 4 HOH 130 539 539 HOH HOH B . K 4 HOH 131 540 540 HOH HOH B . K 4 HOH 132 541 541 HOH HOH B . K 4 HOH 133 542 542 HOH HOH B . K 4 HOH 134 543 543 HOH HOH B . K 4 HOH 135 544 544 HOH HOH B . K 4 HOH 136 545 545 HOH HOH B . K 4 HOH 137 546 546 HOH HOH B . K 4 HOH 138 547 547 HOH HOH B . K 4 HOH 139 548 548 HOH HOH B . K 4 HOH 140 549 549 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6130 ? 1 MORE -44 ? 1 'SSA (A^2)' 17350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 437 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id K _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-01-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-09 4 'Structure model' 1 3 2013-06-05 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Structure summary' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 55 ? ? -128.67 -91.73 2 1 ASP A 133 ? ? -164.79 73.91 3 1 LYS A 161 ? ? -162.33 76.64 4 1 ASP A 164 ? ? -94.85 -71.10 5 1 PHE A 167 ? ? 57.57 73.31 6 1 ASP A 177 ? ? -148.67 26.22 7 1 SER B 24 ? ? -172.17 125.43 8 1 THR B 52 ? ? -62.97 0.77 9 1 LYS B 55 ? ? -161.09 -165.37 10 1 GLU B 56 ? ? -85.16 49.41 11 1 ASP B 133 ? ? -166.00 74.65 12 1 LEU B 136 ? ? -122.83 -50.64 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 13 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8DD N1 N Y N 1 8DD C2 C Y N 2 8DD N3 N Y N 3 8DD C4 C Y N 4 8DD C5 C Y N 5 8DD C6 C Y N 6 8DD N6 N N N 7 8DD N7 N N N 8 8DD C8 C N N 9 8DD O8 O N N 10 8DD N9 N N N 11 8DD PA P N N 12 8DD PB P N N 13 8DD "C1'" C N R 14 8DD O1A O N N 15 8DD O1B O N N 16 8DD "C2'" C N N 17 8DD O2A O N N 18 8DD O2B O N N 19 8DD "C3'" C N S 20 8DD "O3'" O N N 21 8DD O3A O N N 22 8DD O3B O N N 23 8DD "C4'" C N R 24 8DD "O4'" O N N 25 8DD "C5'" C N N 26 8DD "O5'" O N N 27 8DD H2 H N N 28 8DD HN6 H N N 29 8DD HN6A H N N 30 8DD HN7 H N N 31 8DD "H1'" H N N 32 8DD HO1B H N N 33 8DD "H2'" H N N 34 8DD "H2'A" H N N 35 8DD HO2A H N N 36 8DD "H3'" H N N 37 8DD "HO3'" H N N 38 8DD HO3B H N N 39 8DD "H4'" H N N 40 8DD "H5'" H N N 41 8DD "H5'A" H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CYS N N N N 116 CYS CA C N R 117 CYS C C N N 118 CYS O O N N 119 CYS CB C N N 120 CYS SG S N N 121 CYS OXT O N N 122 CYS H H N N 123 CYS H2 H N N 124 CYS HA H N N 125 CYS HB2 H N N 126 CYS HB3 H N N 127 CYS HG H N N 128 CYS HXT H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 HIS N N N N 179 HIS CA C N S 180 HIS C C N N 181 HIS O O N N 182 HIS CB C N N 183 HIS CG C Y N 184 HIS ND1 N Y N 185 HIS CD2 C Y N 186 HIS CE1 C Y N 187 HIS NE2 N Y N 188 HIS OXT O N N 189 HIS H H N N 190 HIS H2 H N N 191 HIS HA H N N 192 HIS HB2 H N N 193 HIS HB3 H N N 194 HIS HD1 H N N 195 HIS HD2 H N N 196 HIS HE1 H N N 197 HIS HE2 H N N 198 HIS HXT H N N 199 HOH O O N N 200 HOH H1 H N N 201 HOH H2 H N N 202 ILE N N N N 203 ILE CA C N S 204 ILE C C N N 205 ILE O O N N 206 ILE CB C N S 207 ILE CG1 C N N 208 ILE CG2 C N N 209 ILE CD1 C N N 210 ILE OXT O N N 211 ILE H H N N 212 ILE H2 H N N 213 ILE HA H N N 214 ILE HB H N N 215 ILE HG12 H N N 216 ILE HG13 H N N 217 ILE HG21 H N N 218 ILE HG22 H N N 219 ILE HG23 H N N 220 ILE HD11 H N N 221 ILE HD12 H N N 222 ILE HD13 H N N 223 ILE HXT H N N 224 LEU N N N N 225 LEU CA C N S 226 LEU C C N N 227 LEU O O N N 228 LEU CB C N N 229 LEU CG C N N 230 LEU CD1 C N N 231 LEU CD2 C N N 232 LEU OXT O N N 233 LEU H H N N 234 LEU H2 H N N 235 LEU HA H N N 236 LEU HB2 H N N 237 LEU HB3 H N N 238 LEU HG H N N 239 LEU HD11 H N N 240 LEU HD12 H N N 241 LEU HD13 H N N 242 LEU HD21 H N N 243 LEU HD22 H N N 244 LEU HD23 H N N 245 LEU HXT H N N 246 LYS N N N N 247 LYS CA C N S 248 LYS C C N N 249 LYS O O N N 250 LYS CB C N N 251 LYS CG C N N 252 LYS CD C N N 253 LYS CE C N N 254 LYS NZ N N N 255 LYS OXT O N N 256 LYS H H N N 257 LYS H2 H N N 258 LYS HA H N N 259 LYS HB2 H N N 260 LYS HB3 H N N 261 LYS HG2 H N N 262 LYS HG3 H N N 263 LYS HD2 H N N 264 LYS HD3 H N N 265 LYS HE2 H N N 266 LYS HE3 H N N 267 LYS HZ1 H N N 268 LYS HZ2 H N N 269 LYS HZ3 H N N 270 LYS HXT H N N 271 MET N N N N 272 MET CA C N S 273 MET C C N N 274 MET O O N N 275 MET CB C N N 276 MET CG C N N 277 MET SD S N N 278 MET CE C N N 279 MET OXT O N N 280 MET H H N N 281 MET H2 H N N 282 MET HA H N N 283 MET HB2 H N N 284 MET HB3 H N N 285 MET HG2 H N N 286 MET HG3 H N N 287 MET HE1 H N N 288 MET HE2 H N N 289 MET HE3 H N N 290 MET HXT H N N 291 MN MN MN N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8DD N1 C2 doub Y N 1 8DD N1 C6 sing Y N 2 8DD C2 N3 sing Y N 3 8DD N3 C4 doub Y N 4 8DD C4 C5 sing Y N 5 8DD C4 N9 sing N N 6 8DD C5 C6 doub Y N 7 8DD C5 N7 sing N N 8 8DD C6 N6 sing N N 9 8DD N7 C8 sing N N 10 8DD C8 O8 doub N N 11 8DD C8 N9 sing N N 12 8DD N9 "C1'" sing N N 13 8DD PA O1A doub N N 14 8DD PA O2A sing N N 15 8DD PA O3A sing N N 16 8DD PA "O5'" sing N N 17 8DD PB O1B sing N N 18 8DD PB O2B doub N N 19 8DD PB O3A sing N N 20 8DD PB O3B sing N N 21 8DD "C1'" "C2'" sing N N 22 8DD "C1'" "O4'" sing N N 23 8DD "C2'" "C3'" sing N N 24 8DD "C3'" "O3'" sing N N 25 8DD "C3'" "C4'" sing N N 26 8DD "C4'" "O4'" sing N N 27 8DD "C4'" "C5'" sing N N 28 8DD "C5'" "O5'" sing N N 29 8DD C2 H2 sing N N 30 8DD N6 HN6 sing N N 31 8DD N6 HN6A sing N N 32 8DD N7 HN7 sing N N 33 8DD "C1'" "H1'" sing N N 34 8DD O1B HO1B sing N N 35 8DD "C2'" "H2'" sing N N 36 8DD "C2'" "H2'A" sing N N 37 8DD O2A HO2A sing N N 38 8DD "C3'" "H3'" sing N N 39 8DD "O3'" "HO3'" sing N N 40 8DD O3B HO3B sing N N 41 8DD "C4'" "H4'" sing N N 42 8DD "C5'" "H5'" sing N N 43 8DD "C5'" "H5'A" sing N N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 ILE N CA sing N N 196 ILE N H sing N N 197 ILE N H2 sing N N 198 ILE CA C sing N N 199 ILE CA CB sing N N 200 ILE CA HA sing N N 201 ILE C O doub N N 202 ILE C OXT sing N N 203 ILE CB CG1 sing N N 204 ILE CB CG2 sing N N 205 ILE CB HB sing N N 206 ILE CG1 CD1 sing N N 207 ILE CG1 HG12 sing N N 208 ILE CG1 HG13 sing N N 209 ILE CG2 HG21 sing N N 210 ILE CG2 HG22 sing N N 211 ILE CG2 HG23 sing N N 212 ILE CD1 HD11 sing N N 213 ILE CD1 HD12 sing N N 214 ILE CD1 HD13 sing N N 215 ILE OXT HXT sing N N 216 LEU N CA sing N N 217 LEU N H sing N N 218 LEU N H2 sing N N 219 LEU CA C sing N N 220 LEU CA CB sing N N 221 LEU CA HA sing N N 222 LEU C O doub N N 223 LEU C OXT sing N N 224 LEU CB CG sing N N 225 LEU CB HB2 sing N N 226 LEU CB HB3 sing N N 227 LEU CG CD1 sing N N 228 LEU CG CD2 sing N N 229 LEU CG HG sing N N 230 LEU CD1 HD11 sing N N 231 LEU CD1 HD12 sing N N 232 LEU CD1 HD13 sing N N 233 LEU CD2 HD21 sing N N 234 LEU CD2 HD22 sing N N 235 LEU CD2 HD23 sing N N 236 LEU OXT HXT sing N N 237 LYS N CA sing N N 238 LYS N H sing N N 239 LYS N H2 sing N N 240 LYS CA C sing N N 241 LYS CA CB sing N N 242 LYS CA HA sing N N 243 LYS C O doub N N 244 LYS C OXT sing N N 245 LYS CB CG sing N N 246 LYS CB HB2 sing N N 247 LYS CB HB3 sing N N 248 LYS CG CD sing N N 249 LYS CG HG2 sing N N 250 LYS CG HG3 sing N N 251 LYS CD CE sing N N 252 LYS CD HD2 sing N N 253 LYS CD HD3 sing N N 254 LYS CE NZ sing N N 255 LYS CE HE2 sing N N 256 LYS CE HE3 sing N N 257 LYS NZ HZ1 sing N N 258 LYS NZ HZ2 sing N N 259 LYS NZ HZ3 sing N N 260 LYS OXT HXT sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TRP N CA sing N N 350 TRP N H sing N N 351 TRP N H2 sing N N 352 TRP CA C sing N N 353 TRP CA CB sing N N 354 TRP CA HA sing N N 355 TRP C O doub N N 356 TRP C OXT sing N N 357 TRP CB CG sing N N 358 TRP CB HB2 sing N N 359 TRP CB HB3 sing N N 360 TRP CG CD1 doub Y N 361 TRP CG CD2 sing Y N 362 TRP CD1 NE1 sing Y N 363 TRP CD1 HD1 sing N N 364 TRP CD2 CE2 doub Y N 365 TRP CD2 CE3 sing Y N 366 TRP NE1 CE2 sing Y N 367 TRP NE1 HE1 sing N N 368 TRP CE2 CZ2 sing Y N 369 TRP CE3 CZ3 doub Y N 370 TRP CE3 HE3 sing N N 371 TRP CZ2 CH2 doub Y N 372 TRP CZ2 HZ2 sing N N 373 TRP CZ3 CH2 sing Y N 374 TRP CZ3 HZ3 sing N N 375 TRP CH2 HH2 sing N N 376 TRP OXT HXT sing N N 377 TYR N CA sing N N 378 TYR N H sing N N 379 TYR N H2 sing N N 380 TYR CA C sing N N 381 TYR CA CB sing N N 382 TYR CA HA sing N N 383 TYR C O doub N N 384 TYR C OXT sing N N 385 TYR CB CG sing N N 386 TYR CB HB2 sing N N 387 TYR CB HB3 sing N N 388 TYR CG CD1 doub Y N 389 TYR CG CD2 sing Y N 390 TYR CD1 CE1 sing Y N 391 TYR CD1 HD1 sing N N 392 TYR CD2 CE2 doub Y N 393 TYR CD2 HD2 sing N N 394 TYR CE1 CZ doub Y N 395 TYR CE1 HE1 sing N N 396 TYR CE2 CZ sing Y N 397 TYR CE2 HE2 sing N N 398 TYR CZ OH sing N N 399 TYR OH HH sing N N 400 TYR OXT HXT sing N N 401 VAL N CA sing N N 402 VAL N H sing N N 403 VAL N H2 sing N N 404 VAL CA C sing N N 405 VAL CA CB sing N N 406 VAL CA HA sing N N 407 VAL C O doub N N 408 VAL C OXT sing N N 409 VAL CB CG1 sing N N 410 VAL CB CG2 sing N N 411 VAL CB HB sing N N 412 VAL CG1 HG11 sing N N 413 VAL CG1 HG12 sing N N 414 VAL CG1 HG13 sing N N 415 VAL CG2 HG21 sing N N 416 VAL CG2 HG22 sing N N 417 VAL CG2 HG23 sing N N 418 VAL OXT HXT sing N N 419 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 "8-oxo-7,8-dihydro-2'-deoxy-adenosine-5'-diphosphate" 8DD 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3L85 _pdbx_initial_refinement_model.details 'PDB ENTRY 3L85' #