HEADER LYASE 10-FEB-10 3AEM TITLE REACTION INTERMEDIATE STRUCTURE OF ENTAMOEBA HISTOLYTICA METHIONINE TITLE 2 GAMMA-LYASE 1 CONTAINING MICHAELIS COMPLEX AND METHIONINE IMINE- TITLE 3 PYRIDOXAMINE-5'-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE GAMMA-LYASE; COMPND 3 CHAIN: A, B, D; COMPND 4 EC: 4.4.1.11; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: METHIONINE GAMMA-LYASE; COMPND 8 CHAIN: C; COMPND 9 EC: 4.4.1.11; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 GENE: METG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX6P1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 12 ORGANISM_TAXID: 5759; SOURCE 13 GENE: METG; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PGEX6P1 KEYWDS GAMMA-LYASE, L-METHIONINE, ENTAMOEBA HISTOLYTICA, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.KARAKI,D.SATO,A.SHIMIZU,T.NOZAKI,S.HARADA REVDAT 4 15-NOV-23 3AEM 1 REMARK REVDAT 3 01-NOV-23 3AEM 1 REMARK LINK REVDAT 2 11-OCT-17 3AEM 1 REMARK REVDAT 1 09-FEB-11 3AEM 0 JRNL AUTH T.KARAKI,D.SATO,A.SHIMIZU,T.NOZAKI,S.HARADA JRNL TITL CRYSTAL STRUCTURE OF ENTAMOEBA HISTOLYTICA METHIONINE JRNL TITL 2 GAMMA-LYASE 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 90121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4752 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6380 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.1850 REMARK 3 BIN FREE R VALUE SET COUNT : 356 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11767 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.194 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.165 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.110 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12140 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16424 ; 1.537 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1548 ; 5.843 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 466 ;35.231 ;24.592 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2102 ;16.204 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;15.462 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1865 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8939 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7689 ; 0.626 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 12379 ; 1.216 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4451 ; 2.329 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4041 ; 3.778 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 68 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8730 -13.8300 35.2420 REMARK 3 T TENSOR REMARK 3 T11: 0.1879 T22: 0.1257 REMARK 3 T33: 0.1500 T12: -0.0546 REMARK 3 T13: 0.0044 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 0.6875 L22: 0.8549 REMARK 3 L33: 1.5578 L12: -0.2437 REMARK 3 L13: -0.2267 L23: -0.1059 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: 0.1863 S13: -0.1976 REMARK 3 S21: -0.0887 S22: 0.0246 S23: 0.0616 REMARK 3 S31: 0.2317 S32: -0.2274 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 69 A 251 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0560 4.0360 45.8040 REMARK 3 T TENSOR REMARK 3 T11: 0.1382 T22: 0.0388 REMARK 3 T33: 0.1534 T12: 0.0004 REMARK 3 T13: 0.0009 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 1.9168 L22: 0.5645 REMARK 3 L33: 0.4707 L12: -0.0290 REMARK 3 L13: -0.1911 L23: 0.1530 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: 0.0902 S13: 0.1056 REMARK 3 S21: -0.0233 S22: -0.0186 S23: 0.1441 REMARK 3 S31: -0.0417 S32: -0.0742 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 252 A 389 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0430 18.1500 57.1790 REMARK 3 T TENSOR REMARK 3 T11: 0.1218 T22: 0.0619 REMARK 3 T33: 0.1581 T12: 0.0113 REMARK 3 T13: 0.0054 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.0490 L22: 1.7227 REMARK 3 L33: 0.8283 L12: -0.1154 REMARK 3 L13: -0.1063 L23: 0.6509 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: -0.0437 S13: 0.1844 REMARK 3 S21: 0.0068 S22: -0.0346 S23: 0.0803 REMARK 3 S31: -0.0395 S32: -0.0991 S33: 0.0176 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 503 B 566 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7520 -17.8660 28.3310 REMARK 3 T TENSOR REMARK 3 T11: 0.2334 T22: 0.1434 REMARK 3 T33: 0.1356 T12: -0.0204 REMARK 3 T13: 0.0360 T23: -0.0832 REMARK 3 L TENSOR REMARK 3 L11: 0.7454 L22: 0.7470 REMARK 3 L33: 1.2563 L12: 0.1094 REMARK 3 L13: 0.0946 L23: -0.4010 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: 0.2886 S13: -0.2370 REMARK 3 S21: -0.1768 S22: 0.0184 S23: -0.0507 REMARK 3 S31: 0.2718 S32: 0.0460 S33: 0.0015 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 567 B 806 REMARK 3 ORIGIN FOR THE GROUP (A): 35.8350 -4.6420 13.2380 REMARK 3 T TENSOR REMARK 3 T11: 0.1949 T22: 0.2700 REMARK 3 T33: 0.0632 T12: 0.0132 REMARK 3 T13: 0.0920 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 1.2472 L22: 0.7861 REMARK 3 L33: 0.9296 L12: -0.1867 REMARK 3 L13: 0.1051 L23: 0.0020 REMARK 3 S TENSOR REMARK 3 S11: 0.0590 S12: 0.5026 S13: -0.0046 REMARK 3 S21: -0.2458 S22: -0.0544 S23: -0.1626 REMARK 3 S31: 0.0538 S32: 0.1495 S33: -0.0047 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 807 B 888 REMARK 3 ORIGIN FOR THE GROUP (A): 32.1580 16.0750 9.6870 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.3675 REMARK 3 T33: 0.2006 T12: -0.0501 REMARK 3 T13: 0.1369 T23: 0.1465 REMARK 3 L TENSOR REMARK 3 L11: 1.7217 L22: 1.9889 REMARK 3 L33: 2.1980 L12: 0.0822 REMARK 3 L13: -0.5869 L23: 0.5479 REMARK 3 S TENSOR REMARK 3 S11: 0.2079 S12: 0.2719 S13: 0.4507 REMARK 3 S21: -0.2899 S22: -0.0491 S23: -0.3137 REMARK 3 S31: -0.3829 S32: 0.2805 S33: -0.1588 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1003 C 1064 REMARK 3 ORIGIN FOR THE GROUP (A): 24.9470 14.1530 34.4990 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.1222 REMARK 3 T33: 0.1887 T12: -0.0567 REMARK 3 T13: 0.0289 T23: 0.0359 REMARK 3 L TENSOR REMARK 3 L11: 0.9218 L22: 0.6089 REMARK 3 L33: 2.2226 L12: -0.5289 REMARK 3 L13: -0.3206 L23: -0.2013 REMARK 3 S TENSOR REMARK 3 S11: 0.0473 S12: 0.1293 S13: 0.2298 REMARK 3 S21: -0.0813 S22: -0.0137 S23: -0.1339 REMARK 3 S31: -0.2272 S32: 0.2636 S33: -0.0336 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1065 C 1252 REMARK 3 ORIGIN FOR THE GROUP (A): 38.5780 -3.7980 45.5930 REMARK 3 T TENSOR REMARK 3 T11: 0.1406 T22: 0.0341 REMARK 3 T33: 0.1512 T12: -0.0045 REMARK 3 T13: 0.0226 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 1.8881 L22: 0.5894 REMARK 3 L33: 0.4573 L12: -0.2752 REMARK 3 L13: 0.2325 L23: -0.1857 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: 0.0643 S13: -0.0452 REMARK 3 S21: -0.0259 S22: -0.0394 S23: -0.1276 REMARK 3 S31: 0.0398 S32: 0.0563 S33: 0.0255 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1253 C 1389 REMARK 3 ORIGIN FOR THE GROUP (A): 23.9940 -18.3430 57.1810 REMARK 3 T TENSOR REMARK 3 T11: 0.1252 T22: 0.0649 REMARK 3 T33: 0.1660 T12: 0.0089 REMARK 3 T13: 0.0195 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.0310 L22: 1.7457 REMARK 3 L33: 0.7567 L12: 0.0413 REMARK 3 L13: 0.1827 L23: -0.5103 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: -0.0333 S13: -0.1805 REMARK 3 S21: 0.0104 S22: -0.0281 S23: -0.1100 REMARK 3 S31: 0.0335 S32: 0.0927 S33: -0.0026 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1505 D 1562 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3410 18.1280 29.6480 REMARK 3 T TENSOR REMARK 3 T11: 0.2191 T22: 0.1438 REMARK 3 T33: 0.1808 T12: -0.0148 REMARK 3 T13: 0.0089 T23: 0.0805 REMARK 3 L TENSOR REMARK 3 L11: 0.7194 L22: 0.4845 REMARK 3 L33: 1.7818 L12: -0.3558 REMARK 3 L13: -0.2834 L23: 0.4347 REMARK 3 S TENSOR REMARK 3 S11: 0.0685 S12: 0.2638 S13: 0.2117 REMARK 3 S21: -0.1535 S22: -0.0287 S23: -0.0201 REMARK 3 S31: -0.2490 S32: -0.0440 S33: -0.0399 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1563 D 1743 REMARK 3 ORIGIN FOR THE GROUP (A): -12.7180 7.8760 17.4570 REMARK 3 T TENSOR REMARK 3 T11: 0.1754 T22: 0.3073 REMARK 3 T33: 0.0775 T12: -0.0019 REMARK 3 T13: -0.0637 T23: 0.1138 REMARK 3 L TENSOR REMARK 3 L11: 1.6832 L22: 0.7412 REMARK 3 L33: 1.2072 L12: 0.1389 REMARK 3 L13: -0.3235 L23: 0.1839 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: 0.5899 S13: 0.1881 REMARK 3 S21: -0.2060 S22: 0.0472 S23: 0.1549 REMARK 3 S31: -0.0902 S32: -0.2593 S33: -0.0233 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1744 D 1888 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3570 -10.7550 7.0810 REMARK 3 T TENSOR REMARK 3 T11: 0.2551 T22: 0.5367 REMARK 3 T33: 0.0415 T12: -0.1128 REMARK 3 T13: -0.0394 T23: -0.0936 REMARK 3 L TENSOR REMARK 3 L11: 2.0714 L22: 1.4434 REMARK 3 L33: 1.7532 L12: 0.2262 REMARK 3 L13: 0.2992 L23: 0.6351 REMARK 3 S TENSOR REMARK 3 S11: -0.0416 S12: 0.7413 S13: -0.2093 REMARK 3 S21: -0.2849 S22: 0.0387 S23: 0.1191 REMARK 3 S31: 0.1681 S32: -0.3803 S33: 0.0029 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AEM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000029156. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94891 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5410 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.34900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.595 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3ACZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M (NH4)2SO4, 0.1M CACODYLATE REMARK 280 BUFFER, 0.1M LI3(C3H5O(COO)3), 0.1MM PYRIDOZXAL 5'-PHOSPHATE, PH REMARK 280 6.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.66600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -132.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 MET B 501 REMARK 465 THR B 502 REMARK 465 TRP B 889 REMARK 465 MET C 1001 REMARK 465 THR C 1002 REMARK 465 MET D 1501 REMARK 465 THR D 1502 REMARK 465 ALA D 1503 REMARK 465 GLN D 1504 REMARK 465 TRP D 1889 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 20 13.41 59.52 REMARK 500 ILE A 52 -50.74 -124.63 REMARK 500 SER A 185 156.67 75.98 REMARK 500 LYS A 205 -117.17 -94.53 REMARK 500 SER A 332 177.43 83.50 REMARK 500 MET A 346 -94.17 -131.39 REMARK 500 ILE B 552 -55.31 -126.05 REMARK 500 SER B 685 155.80 78.55 REMARK 500 SER B 704 -18.97 -49.92 REMARK 500 LYS B 705 -117.97 -98.52 REMARK 500 ASN B 783 79.98 -100.99 REMARK 500 SER B 832 176.38 86.48 REMARK 500 MET B 846 -97.97 -125.83 REMARK 500 HIS C1020 13.59 58.73 REMARK 500 ILE C1052 -51.34 -124.24 REMARK 500 SER C1185 157.55 80.07 REMARK 500 LLP C1205 -119.51 -95.57 REMARK 500 ASN C1283 74.83 -100.87 REMARK 500 SER C1332 175.72 79.02 REMARK 500 MET C1346 -97.82 -132.65 REMARK 500 ILE D1552 -51.93 -125.44 REMARK 500 SER D1685 157.33 77.92 REMARK 500 LYS D1705 -118.17 -93.44 REMARK 500 SER D1832 176.67 87.52 REMARK 500 MET D1846 -96.79 -127.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS C 1201 SER C 1202 148.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LM A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LM B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MET C 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LM D 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 2010 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ACZ RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH SUBSTRATE REMARK 900 RELATED ID: 3AEJ RELATED DB: PDB REMARK 900 RELATED ID: 3AEL RELATED DB: PDB REMARK 900 RELATED ID: 3AEN RELATED DB: PDB REMARK 900 RELATED ID: 3AEO RELATED DB: PDB REMARK 900 RELATED ID: 3AEP RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 1. ACCORDING TO AUTHOR, THE SUBSTITUTION OF LEU TO SER AT A308, REMARK 999 B808, C1308, D1808 ARE ALLELIC VARIATION. 2. SINCE THE GENE HAD REMARK 999 INTERNAL METHIONINE AND UPSTREAM OF THIS MET IS SIMILAR TO SHINE- REMARK 999 DALGARNO SEQUENCE, SEVERAL NUCLEOTIDES WERE REPLACED NOT TO CHANGE REMARK 999 THE AMINO ACID RESIDUES, BUT AVOID RIBOSOME BINDING IN E. COLI REMARK 999 EXPRESSION SYSTEM. DBREF 3AEM A 1 389 UNP Q86D28 Q86D28_ENTHI 1 389 DBREF 3AEM B 501 889 UNP Q86D28 Q86D28_ENTHI 1 389 DBREF 3AEM C 1001 1389 UNP Q86D28 Q86D28_ENTHI 1 389 DBREF 3AEM D 1501 1889 UNP Q86D28 Q86D28_ENTHI 1 389 SEQADV 3AEM LEU A 308 UNP Q86D28 SER 308 SEE REMARK 999 SEQADV 3AEM LEU B 808 UNP Q86D28 SER 308 SEE REMARK 999 SEQADV 3AEM LEU C 1308 UNP Q86D28 SER 308 SEE REMARK 999 SEQADV 3AEM LEU D 1808 UNP Q86D28 SER 308 SEE REMARK 999 SEQRES 1 A 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 A 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 A 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 A 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 A 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 A 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 A 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 A 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 A 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 A 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 A 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 A 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 A 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 A 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 A 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 A 389 ALA ASP ILE ALA LEU HIS SER VAL SER LYS TYR ILE ASN SEQRES 17 A 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 A 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 A 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 A 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 A 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 A 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 A 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 A 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 A 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 A 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 A 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 A 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 A 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 A 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP SEQRES 1 B 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 B 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 B 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 B 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 B 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 B 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 B 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 B 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 B 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 B 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 B 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 B 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 B 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 B 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 B 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 B 389 ALA ASP ILE ALA LEU HIS SER VAL SER LYS TYR ILE ASN SEQRES 17 B 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 B 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 B 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 B 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 B 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 B 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 B 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 B 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 B 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 B 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 B 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 B 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 B 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 B 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP SEQRES 1 C 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 C 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 C 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 C 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 C 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 C 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 C 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 C 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 C 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 C 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 C 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 C 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 C 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 C 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 C 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 C 389 ALA ASP ILE ALA LEU HIS SER VAL SER LLP TYR ILE ASN SEQRES 17 C 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 C 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 C 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 C 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 C 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 C 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 C 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 C 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 C 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 C 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 C 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 C 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 C 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 C 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP SEQRES 1 D 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 D 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 D 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 D 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 D 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 D 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 D 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 D 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 D 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 D 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 D 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 D 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 D 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 D 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 D 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 D 389 ALA ASP ILE ALA LEU HIS SER VAL SER LYS TYR ILE ASN SEQRES 17 D 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 D 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 D 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 D 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 D 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 D 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 D 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 D 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 D 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 D 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 D 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 D 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 D 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 D 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP MODRES 3AEM LLP C 1205 LYS HET LLP C1205 24 HET 2LM A2001 24 HET SO4 A2005 5 HET GOL A2009 6 HET 2LM B2002 24 HET SO4 B2006 5 HET MET C2003 9 HET SO4 C2007 5 HET GOL C2010 6 HET 2LM D2004 24 HET SO4 D2008 5 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM 2LM (2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY) HETNAM 2 2LM METHYL]PYRIDIN-4-YL}METHYL)IMINO]-4-(METHYLSULFANYL) HETNAM 3 2LM BUTANOIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM MET METHIONINE HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 LLP C14 H22 N3 O7 P FORMUL 5 2LM 3(C13 H19 N2 O7 P S) FORMUL 6 SO4 4(O4 S 2-) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 10 MET C5 H11 N O2 S FORMUL 15 HOH *890(H2 O) HELIX 1 1 ASP A 5 HIS A 12 1 8 HELIX 2 2 SER A 36 MET A 45 1 10 HELIX 3 3 ASN A 58 GLY A 73 1 16 HELIX 4 4 SER A 82 LEU A 92 1 11 HELIX 5 5 TYR A 108 PHE A 122 1 15 HELIX 6 6 ASP A 133 ALA A 140 1 8 HELIX 7 7 ASP A 162 GLY A 174 1 13 HELIX 8 8 LYS A 190 GLY A 195 5 6 HELIX 9 9 THR A 222 GLY A 237 1 16 HELIX 10 10 ALA A 241 LYS A 253 1 13 HELIX 11 11 THR A 254 GLN A 275 1 22 HELIX 12 12 GLY A 292 MET A 300 1 9 HELIX 13 13 SER A 313 GLU A 322 1 10 HELIX 14 14 HIS A 342 MET A 346 5 5 HELIX 15 15 PRO A 352 GLN A 359 1 8 HELIX 16 16 ASN A 374 GLU A 387 1 14 HELIX 17 17 ASP B 505 HIS B 512 1 8 HELIX 18 18 SER B 536 MET B 545 1 10 HELIX 19 19 ASN B 558 GLY B 573 1 16 HELIX 20 20 SER B 582 LEU B 592 1 11 HELIX 21 21 TYR B 608 PHE B 622 1 15 HELIX 22 22 ASP B 633 TRP B 641 1 9 HELIX 23 23 ASP B 662 GLY B 674 1 13 HELIX 24 24 LYS B 690 GLY B 695 5 6 HELIX 25 25 THR B 722 GLY B 737 1 16 HELIX 26 26 ALA B 741 LYS B 753 1 13 HELIX 27 27 THR B 754 HIS B 776 1 23 HELIX 28 28 GLY B 792 MET B 800 1 9 HELIX 29 29 SER B 813 HIS B 823 1 11 HELIX 30 30 HIS B 842 MET B 846 5 5 HELIX 31 31 PRO B 852 GLY B 860 1 9 HELIX 32 32 ASN B 874 GLU B 887 1 14 HELIX 33 33 ASP C 1005 HIS C 1012 1 8 HELIX 34 34 SER C 1036 MET C 1045 1 10 HELIX 35 35 ASN C 1058 GLY C 1073 1 16 HELIX 36 36 SER C 1082 LEU C 1092 1 11 HELIX 37 37 TYR C 1108 PHE C 1122 1 15 HELIX 38 38 ASP C 1133 TRP C 1141 1 9 HELIX 39 39 ASP C 1162 GLY C 1174 1 13 HELIX 40 40 LYS C 1190 GLY C 1195 5 6 HELIX 41 41 THR C 1222 GLY C 1237 1 16 HELIX 42 42 ALA C 1241 LYS C 1253 1 13 HELIX 43 43 THR C 1254 GLN C 1275 1 22 HELIX 44 44 GLY C 1292 MET C 1300 1 9 HELIX 45 45 SER C 1313 GLU C 1322 1 10 HELIX 46 46 HIS C 1342 MET C 1346 5 5 HELIX 47 47 PRO C 1352 GLY C 1360 1 9 HELIX 48 48 ASN C 1374 GLU C 1387 1 14 HELIX 49 49 ASP D 1505 HIS D 1512 1 8 HELIX 50 50 SER D 1536 MET D 1545 1 10 HELIX 51 51 ASN D 1558 GLY D 1573 1 16 HELIX 52 52 SER D 1582 LEU D 1592 1 11 HELIX 53 53 TYR D 1608 PHE D 1622 1 15 HELIX 54 54 ASP D 1633 TRP D 1641 1 9 HELIX 55 55 ASP D 1662 GLY D 1674 1 13 HELIX 56 56 LYS D 1690 GLY D 1695 5 6 HELIX 57 57 THR D 1722 GLY D 1737 1 16 HELIX 58 58 ALA D 1741 LYS D 1753 1 13 HELIX 59 59 THR D 1754 GLN D 1775 1 22 HELIX 60 60 GLY D 1792 MET D 1800 1 9 HELIX 61 61 SER D 1813 GLU D 1822 1 10 HELIX 62 62 PRO D 1852 GLY D 1860 1 9 HELIX 63 63 ASN D 1874 LEU D 1888 1 15 SHEET 1 A 7 GLY A 76 PHE A 80 0 SHEET 2 A 7 GLY A 216 ALA A 220 -1 O SER A 218 N ALA A 78 SHEET 3 A 7 ILE A 198 SER A 202 -1 N ALA A 199 O SER A 219 SHEET 4 A 7 ARG A 176 ASP A 180 1 N VAL A 179 O LEU A 200 SHEET 5 A 7 THR A 145 GLU A 151 1 N LEU A 150 O ASP A 180 SHEET 6 A 7 HIS A 100 GLY A 104 1 N HIS A 100 O LYS A 146 SHEET 7 A 7 GLU A 125 ILE A 129 1 O ILE A 129 N ALA A 103 SHEET 1 B 5 LYS A 281 ASN A 283 0 SHEET 2 B 5 THR A 306 GLU A 310 -1 O LEU A 308 N ASN A 283 SHEET 3 B 5 LEU A 365 SER A 369 -1 O ILE A 368 N PHE A 307 SHEET 4 B 5 LEU A 339 GLU A 341 -1 N LEU A 339 O SER A 369 SHEET 5 B 5 THR A 328 LEU A 329 1 N THR A 328 O ILE A 340 SHEET 1 C 7 GLY B 576 PHE B 580 0 SHEET 2 C 7 GLY B 716 ALA B 720 -1 O SER B 718 N ALA B 578 SHEET 3 C 7 ILE B 698 SER B 702 -1 N ALA B 699 O SER B 719 SHEET 4 C 7 ARG B 676 ASP B 680 1 N VAL B 679 O LEU B 700 SHEET 5 C 7 THR B 645 GLU B 651 1 N VAL B 648 O ARG B 676 SHEET 6 C 7 HIS B 600 GLY B 604 1 N HIS B 600 O LYS B 646 SHEET 7 C 7 GLU B 625 ILE B 629 1 O GLU B 625 N LEU B 601 SHEET 1 D 5 ILE B 779 ASN B 783 0 SHEET 2 D 5 THR B 806 MET B 811 -1 O LEU B 808 N ASN B 783 SHEET 3 D 5 LEU B 865 SER B 869 -1 O VAL B 866 N PHE B 809 SHEET 4 D 5 LEU B 839 GLU B 841 -1 N LEU B 839 O SER B 869 SHEET 5 D 5 THR B 828 LEU B 829 1 N THR B 828 O ILE B 840 SHEET 1 E 7 GLY C1076 PHE C1080 0 SHEET 2 E 7 GLY C1216 ALA C1220 -1 O SER C1218 N ALA C1078 SHEET 3 E 7 ILE C1198 SER C1202 -1 N ALA C1199 O SER C1219 SHEET 4 E 7 ARG C1176 ASP C1180 1 N VAL C1179 O ILE C1198 SHEET 5 E 7 THR C1145 GLU C1151 1 N LEU C1150 O ASP C1180 SHEET 6 E 7 HIS C1100 GLY C1104 1 N HIS C1100 O LYS C1146 SHEET 7 E 7 GLU C1125 ILE C1129 1 O ILE C1129 N ALA C1103 SHEET 1 F 5 ILE C1279 ASN C1283 0 SHEET 2 F 5 THR C1306 MET C1311 -1 O GLU C1310 N VAL C1280 SHEET 3 F 5 LEU C1365 SER C1369 -1 O ILE C1368 N PHE C1307 SHEET 4 F 5 LEU C1339 GLU C1341 -1 N LEU C1339 O SER C1369 SHEET 5 F 5 THR C1328 LEU C1329 1 N THR C1328 O ILE C1340 SHEET 1 G 7 GLY D1576 PHE D1580 0 SHEET 2 G 7 GLY D1716 ALA D1720 -1 O SER D1718 N ALA D1578 SHEET 3 G 7 ILE D1698 SER D1702 -1 N ALA D1699 O SER D1719 SHEET 4 G 7 ARG D1676 ASP D1680 1 N VAL D1679 O LEU D1700 SHEET 5 G 7 THR D1645 GLU D1651 1 N LEU D1650 O VAL D1678 SHEET 6 G 7 HIS D1600 GLY D1604 1 N ILE D1602 O TYR D1649 SHEET 7 G 7 GLU D1625 ILE D1629 1 O GLU D1625 N LEU D1601 SHEET 1 H 5 ILE D1779 ASN D1783 0 SHEET 2 H 5 THR D1806 MET D1811 -1 O LEU D1808 N ASN D1783 SHEET 3 H 5 LEU D1865 SER D1869 -1 O ILE D1868 N PHE D1807 SHEET 4 H 5 LEU D1839 GLU D1841 -1 N LEU D1839 O SER D1869 SHEET 5 H 5 THR D1828 LEU D1829 1 N THR D1828 O ILE D1840 LINK C SER C1204 N LLP C1205 1555 1555 1.33 LINK C LLP C1205 N TYR C1206 1555 1555 1.34 CISPEP 1 SER A 152 PRO A 153 0 -10.52 CISPEP 2 ASN A 155 PRO A 156 0 7.36 CISPEP 3 SER B 652 PRO B 653 0 -1.07 CISPEP 4 ASN B 655 PRO B 656 0 13.48 CISPEP 5 SER C 1152 PRO C 1153 0 -11.40 CISPEP 6 ASN C 1155 PRO C 1156 0 6.40 CISPEP 7 SER D 1652 PRO D 1653 0 -9.75 CISPEP 8 ASN D 1655 PRO D 1656 0 8.76 SITE 1 AC1 20 SER A 82 GLY A 83 MET A 84 ILE A 87 SITE 2 AC1 20 TYR A 108 GLU A 151 ASN A 155 ASP A 180 SITE 3 AC1 20 THR A 182 SER A 202 SER A 204 LYS A 205 SITE 4 AC1 20 GLY A 215 VAL A 331 SER A 332 THR A 347 SITE 5 AC1 20 ARG A 367 HOH A3345 TYR D1553 ARG D1555 SITE 1 AC2 18 SER B 582 GLY B 583 MET B 584 ILE B 587 SITE 2 AC2 18 TYR B 608 GLU B 651 ASN B 655 ASP B 680 SITE 3 AC2 18 THR B 682 SER B 702 SER B 704 LYS B 705 SITE 4 AC2 18 VAL B 831 SER B 832 THR B 847 ARG B 867 SITE 5 AC2 18 TYR C1053 ARG C1055 SITE 1 AC3 6 TYR C1108 ASN C1155 LLP C1205 SER C1332 SITE 2 AC3 6 THR C1347 ARG C1367 SITE 1 AC4 17 TYR A 53 ARG A 55 SER D1582 GLY D1583 SITE 2 AC4 17 MET D1584 ILE D1587 TYR D1608 ASN D1655 SITE 3 AC4 17 ASP D1680 THR D1682 SER D1702 SER D1704 SITE 4 AC4 17 LYS D1705 VAL D1831 SER D1832 THR D1847 SITE 5 AC4 17 ARG D1867 SITE 1 AC5 1 ARG A 176 SITE 1 AC6 1 ARG B 676 SITE 1 AC7 1 ARG C1176 SITE 1 AC8 2 ARG D1676 HOH D3505 SITE 1 AC9 2 HOH A3147 HOH A3228 SITE 1 BC1 3 LYS C1312 HOH C3137 HOH C3713 CRYST1 99.086 85.332 114.331 90.00 101.90 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010092 0.000000 0.002126 0.00000 SCALE2 0.000000 0.011719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008939 0.00000